Carg24638 (gene) Silver-seed gourd

Overview
NameCarg24638
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionactin-depolymerizing factor
LocationCucurbita_argyrosperma_scaffold_269 : 26483 .. 27069 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATGTTTCAAACTCGTTCTTTATTTGATTTCTTCTCAATAATTGTGTTTTCACATGTCTTTTACAATTTCGATAGGCAAATTCAGCATCAGGAATGGCAGTTCACGACGACTGCAAGCTAAAGTTTTTGGATCTTAAGGCTAAAAGAAAGTTCAGATTCATCGTGTTCAAGATCGATGAGAATATCCAACAGGTGACGGTCGAGAGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCGCAGCCATCCCTGCTAATGAATGTCGTTACGCTGTCTATGATTTCGATTTCACAACCGACGAGAATTGCCAAAAGAGCAAGATCTTTTTTATTGCCTGGTATTATCCCGACATATTTATCGTACTATTTAATTTACTAACTTACGAACCTTTTCTTTTTTCCTTAAATTTTTATAATTTGTTTATGTAGGTCACCCGACTCGTCGAAAATAAGAAGTAAAATGTTGTATGCAAGCTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

mRNA sequence

ATGGCAAATTCAGCATCAGGAATGGCAGTTCACGACGACTGCAAGCTAAAGTTTTTGGATCTTAAGGCTAAAAGAAAGTTCAGATTCATCGTGTTCAAGATCGATGAGAATATCCAACAGGTGACGGTCGAGAGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCGCAGCCATCCCTGCTAATGAATGTCGTTACGCTGTCTATGATTTCGATTTCACAACCGACGAGAATTGCCAAAAGAGCAAGATCTTTTTTATTGCCTGGTCACCCGACTCGTCGAAAATAAGAAGTAAAATGTTGTATGCAAGCTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

Coding sequence (CDS)

ATGGCAAATTCAGCATCAGGAATGGCAGTTCACGACGACTGCAAGCTAAAGTTTTTGGATCTTAAGGCTAAAAGAAAGTTCAGATTCATCGTGTTCAAGATCGATGAGAATATCCAACAGGTGACGGTCGAGAGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCGCAGCCATCCCTGCTAATGAATGTCGTTACGCTGTCTATGATTTCGATTTCACAACCGACGAGAATTGCCAAAAGAGCAAGATCTTTTTTATTGCCTGGTCACCCGACTCGTCGAAAATAAGAAGTAAAATGTTGTATGCAAGCTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

Protein sequence

MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAIPANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI
Homology
[Close]
BLAST of Carg24638 vs. NCBI nr
Match: XP_022974602.1 (actin-depolymerizing factor 7-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 276.2 bits (705), Expect = 6.2e-71
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQV VERVGGHDETYNNFLAAI
Sbjct: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSS+IRSKMLYASSRDRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMSIDIIKARAI
Sbjct: 121 LQATDPSEMSIDIIKARAI 139

[Close]
BLAST of Carg24638 vs. NCBI nr
Match: XP_022974601.1 (actin-depolymerizing factor 7-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 274.2 bits (700), Expect = 2.4e-70
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 2   ANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAIP 61
           ANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQV VERVGGHDETYNNFLAAIP
Sbjct: 14  ANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAIP 73

Query: 62  ANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVEL 121
           ANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSS+IRSKMLYASSRDRFKRELDGIQVEL
Sbjct: 74  ANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVEL 133

Query: 122 QATDPSEMSIDIIKARAI 140
           QATDPSEMSIDIIKARAI
Sbjct: 134 QATDPSEMSIDIIKARAI 151

[Close]
BLAST of Carg24638 vs. NCBI nr
Match: XP_022944628.1 (actin-depolymerizing factor 6-like [Cucurbita moschata])

HSP 1 Score: 273.9 bits (699), Expect = 3.1e-70
Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 0 

Query: 2   ANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAIP 61
           ANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQV VERVGGHDETYNNFL AIP
Sbjct: 14  ANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIP 73

Query: 62  ANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVEL 121
           ANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVEL
Sbjct: 74  ANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVEL 133

Query: 122 QATDPSEMSIDIIKARAI 140
           QATDPSEMSIDIIKARAI
Sbjct: 134 QATDPSEMSIDIIKARAI 151

[Close]
BLAST of Carg24638 vs. NCBI nr
Match: XP_023540370.1 (actin-depolymerizing factor-like [Cucurbita pepo subsp. pepo] >XP_023540371.1 actin-depolymerizing factor-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.8 bits (673), Expect = 3.2e-67
Identity = 129/132 (97.73%), Postives = 131/132 (99.24%), Query Frame = 0 

Query: 8   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAIPANECRY 67
           MA+HDDCKLKFLDLK KRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAIPANECRY
Sbjct: 1   MAIHDDCKLKFLDLKTKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAIPANECRY 60

Query: 68  AVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVELQATDPS 127
           AVYDFDFTTDENCQKSKIFFIAWSPDSS+IRSKMLYASSRDRFKRELDGIQVELQATDPS
Sbjct: 61  AVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVELQATDPS 120

Query: 128 EMSIDIIKARAI 140
           EMSIDIIKARAI
Sbjct: 121 EMSIDIIKARAI 132

[Close]
BLAST of Carg24638 vs. NCBI nr
Match: XP_022974603.1 (actin-depolymerizing factor-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 4.2e-67
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0 

Query: 8   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAIPANECRY 67
           MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQV VERVGGHDETYNNFLAAIPANECRY
Sbjct: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLAAIPANECRY 60

Query: 68  AVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVELQATDPS 127
           AVYDFDFTTDENCQKSKIFFIAWSPDSS+IRSKMLYASSRDRFKRELDGIQVELQATDPS
Sbjct: 61  AVYDFDFTTDENCQKSKIFFIAWSPDSSRIRSKMLYASSRDRFKRELDGIQVELQATDPS 120

Query: 128 EMSIDIIKARAI 140
           EMSIDIIKARAI
Sbjct: 121 EMSIDIIKARAI 132

[Close]
BLAST of Carg24638 vs. TAIR10
Match: AT4G00680.1 (actin depolymerizing factor 8)

HSP 1 Score: 224.2 bits (570), Expect = 5.1e-59
Identity = 104/137 (75.91%), Postives = 127/137 (92.70%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANSASGM V+D+CK+KFL+LKAKR +RFIVFKIDE  QQV +E++G  +ETY++F ++I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           P +ECRYAVYDFDFTT++NCQKSKIFFIAWSPD+S++RSKMLYASS+DRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDPSEMS+DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Carg24638 vs. TAIR10
Match: AT1G01750.1 (actin depolymerizing factor 11)

HSP 1 Score: 223.8 bits (569), Expect = 6.6e-59
Identity = 106/137 (77.37%), Postives = 123/137 (89.78%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANSASGM V D+CKLKFL+LKAKR +RFIVFKIDE  QQV ++++G  +ETY +F  +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           P +ECRYAVYD+DFTT ENCQKSKIFFIAWSPD+S++RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDPSEMS+DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Carg24638 vs. TAIR10
Match: AT4G25590.1 (actin depolymerizing factor 7)

HSP 1 Score: 223.8 bits (569), Expect = 6.6e-59
Identity = 107/139 (76.98%), Postives = 127/139 (91.37%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MAN+ASGMAV D+CKLKFL+LK+KR +RFI+F+ID   QQV VE++G  DETY++F A++
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAV+DFDF TDENCQKSKIFFIAWSPDSS++R KM+YASS+DRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS DIIK+RA+
Sbjct: 121 LQATDPSEMSFDIIKSRAL 137

[Close]
BLAST of Carg24638 vs. TAIR10
Match: AT5G52360.1 (actin depolymerizing factor 10)

HSP 1 Score: 213.0 bits (541), Expect = 1.2e-55
Identity = 104/139 (74.82%), Postives = 122/139 (87.77%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MAN+ASGMAV D+CKLKFL+LKAKR +RFI+F+ID   QQV VE++G   E Y++F   +
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDG--QQVVVEKLGSPQENYDDFTNYL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           P NECRYAVYDFDFTT EN QKSKIFFIAWSPDSS++R KM+YASS+DRFKRELDGIQVE
Sbjct: 61  PPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK+RA+
Sbjct: 121 LQATDPSEMSLDIIKSRAL 137

[Close]
BLAST of Carg24638 vs. TAIR10
Match: AT5G59890.1 (actin depolymerizing factor 4)

HSP 1 Score: 213.0 bits (541), Expect = 1.2e-55
Identity = 100/137 (72.99%), Postives = 121/137 (88.32%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MAN+ASGMAVHDDCKL+FL+LKAKR  RFIV+KI+E  +QV VE+VG    TY +F A++
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYA+YDFDF T ENCQKSKIFFIAW PD +K+RSKM+YASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDP+EM +D++K+R
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]
BLAST of Carg24638 vs. Swiss-Prot
Match: sp|P30175|ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.2e-59
Identity = 108/138 (78.26%), Postives = 128/138 (92.75%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANS+SGMAV D+CKLKF++LKAKR FRFIVFKI+E +QQVTVER+G  +E+Y++F   +
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           P NECRYAV+DFDF TDENCQKSKIFFI+WSPD+S++RSKMLYAS++DRFKRELDGIQVE
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARA 139
           LQATDPSEMS+DIIKARA
Sbjct: 121 LQATDPSEMSMDIIKARA 138

[Close]
BLAST of Carg24638 vs. Swiss-Prot
Match: sp|Q7XSN9|ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 PE=2 SV=2)

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-58
Identity = 108/139 (77.70%), Postives = 127/139 (91.37%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANSASGMAV D+CKLKF +LK+KR FRFI FKIDE  QQV V+R+G   +TY++F A++
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAV+DFDF TDENCQKSKIFFI+WSPD+SK+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DI+KARA+
Sbjct: 121 LQATDPSEMSMDIVKARAL 139

[Close]
BLAST of Carg24638 vs. Swiss-Prot
Match: sp|Q6EUH7|ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-58
Identity = 106/139 (76.26%), Postives = 129/139 (92.81%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           M+NSASGMAV D+CKLKFL+LKAKR FRFIVFKI+E +QQV V+R+G   E+Y++F A +
Sbjct: 1   MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAV+DFDF TDENCQKSKIFFI+W+PD+S++RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DI+K+RA+
Sbjct: 121 LQATDPSEMSMDIVKSRAL 139

[Close]
BLAST of Carg24638 vs. Swiss-Prot
Match: sp|Q570Y6|ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana OX=3702 GN=ADF8 PE=2 SV=2)

HSP 1 Score: 224.2 bits (570), Expect = 9.2e-58
Identity = 104/137 (75.91%), Postives = 127/137 (92.70%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANSASGM V+D+CK+KFL+LKAKR +RFIVFKIDE  QQV +E++G  +ETY++F ++I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           P +ECRYAVYDFDFTT++NCQKSKIFFIAWSPD+S++RSKMLYASS+DRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDPSEMS+DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Carg24638 vs. Swiss-Prot
Match: sp|Q9LQ81|ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-57
Identity = 106/137 (77.37%), Postives = 123/137 (89.78%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANSASGM V D+CKLKFL+LKAKR +RFIVFKIDE  QQV ++++G  +ETY +F  +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           P +ECRYAVYD+DFTT ENCQKSKIFFIAWSPD+S++RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKAR 138
           LQATDPSEMS+DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Carg24638 vs. TrEMBL
Match: tr|A0A0A0L6A2|A0A0A0L6A2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122480 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.9e-62
Identity = 117/139 (84.17%), Postives = 135/139 (97.12%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANS+SGMAVHD+CKLKFLDLKAKRK+RFIVFKI+E +QQVTV++VGG DETY++F A+I
Sbjct: 1   MANSSSGMAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAVYD++FTT+ENCQKSKI+FIAWSPDSS+IRSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PANECRYAVYDYNFTTNENCQKSKIYFIAWSPDSSRIRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS DIIK+RA+
Sbjct: 121 LQATDPSEMSFDIIKSRAL 139

[Close]
BLAST of Carg24638 vs. TrEMBL
Match: tr|A0A2I0I7L3|A0A2I0I7L3_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_039640 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.0e-61
Identity = 114/139 (82.01%), Postives = 133/139 (95.68%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANSASGMAVHDDCKLKFL+LKAKR FRFIVFKIDE IQQV +E++G  +ETY++F A++
Sbjct: 1   MANSASGMAVHDDCKLKFLELKAKRNFRFIVFKIDEKIQQVAIEKLGDPNETYDDFTASL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFTT+ENCQKSKIFF+AWSPD++++RSKMLYASS+DRFKRELDGIQ+E
Sbjct: 61  PADECRYAVYDFDFTTEENCQKSKIFFVAWSPDTARVRSKMLYASSKDRFKRELDGIQIE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIKARAI
Sbjct: 121 LQATDPSEMSMDIIKARAI 139

[Close]
BLAST of Carg24638 vs. TrEMBL
Match: tr|A0A1U7ZEK8|A0A1U7ZEK8_NELNU (actin-depolymerizing factor OS=Nelumbo nucifera OX=4432 GN=LOC104592249 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 8.6e-61
Identity = 117/139 (84.17%), Postives = 130/139 (93.53%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANSASGMAV+DDCKLKFL+LKAKR +RFIVFKIDE IQQV VER+G  +E+Y +F A +
Sbjct: 1   MANSASGMAVNDDCKLKFLELKAKRNYRFIVFKIDEKIQQVMVERLGNPEESYEDFTACL 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PANECRYAV+DFDFTTDENCQKSKIFFIAWSPD+SK+RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK RAI
Sbjct: 121 LQATDPSEMSMDIIKGRAI 139

[Close]
BLAST of Carg24638 vs. TrEMBL
Match: tr|M5XE35|M5XE35_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G165300 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-60
Identity = 115/139 (82.73%), Postives = 132/139 (94.96%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           MANSASGMAVHDDCKLKFL+LKAKR  RFIVFKI+E IQQV VE+VGG DE+Y++F A++
Sbjct: 1   MANSASGMAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKVGGPDESYDDFAASM 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFTT+ENCQKSKIFFIAW+PD+S++RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFTTNENCQKSKIFFIAWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK RA+
Sbjct: 121 LQATDPSEMSLDIIKGRAL 139

[Close]
BLAST of Carg24638 vs. TrEMBL
Match: tr|A0A2P6SH25|A0A2P6SH25_ROSCH (Putative ADF/Cofilin, ADF-H/Gelsolin-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0354101 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.3e-60
Identity = 115/139 (82.73%), Postives = 130/139 (93.53%), Query Frame = 0 

Query: 1   MANSASGMAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVTVERVGGHDETYNNFLAAI 60
           M+NSASGMAVHDDCKLKFL+LKAKR  RFIVFKI+E IQQV VE++GG DE+Y +F  +I
Sbjct: 1   MSNSASGMAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKLGGPDESYEDFTNSI 60

Query: 61  PANECRYAVYDFDFTTDENCQKSKIFFIAWSPDSSKIRSKMLYASSRDRFKRELDGIQVE 120
           PA+ECRYAVYDFDFTTDENCQKSKIFFIAWSPD+S++RSKMLYASS+DRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSIDIIKARAI 140
           LQATDPSEMS+DIIK RA+
Sbjct: 121 LQATDPSEMSLDIIKGRAL 139

The following BLAST results are available for this feature:
BLAST of Carg24638 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022974602.16.2e-7198.56actin-depolymerizing factor 7-like isoform X2 [Cucurbita maxima][more]
XP_022974601.12.4e-7098.55actin-depolymerizing factor 7-like isoform X1 [Cucurbita maxima][more]
XP_022944628.13.1e-7098.55actin-depolymerizing factor 6-like [Cucurbita moschata][more]
XP_023540370.13.2e-6797.73actin-depolymerizing factor-like [Cucurbita pepo subsp. pepo] >XP_023540371.1 ac... [more]
XP_022974603.14.2e-6798.48actin-depolymerizing factor-like isoform X3 [Cucurbita maxima][more]
BLAST of Carg24638 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00680.15.1e-5975.91actin depolymerizing factor 8[more]
AT1G01750.16.6e-5977.37actin depolymerizing factor 11[more]
AT4G25590.16.6e-5976.98actin depolymerizing factor 7[more]
AT5G52360.11.2e-5574.82actin depolymerizing factor 10[more]
AT5G59890.11.2e-5572.99actin depolymerizing factor 4[more]
BLAST of Carg24638 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P30175|ADF_LILLO2.2e-5978.26Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1[more]
sp|Q7XSN9|ADF6_ORYSJ1.4e-5877.70Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 P... [more]
sp|Q6EUH7|ADF1_ORYSJ2.4e-5876.26Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 P... [more]
sp|Q570Y6|ADF8_ARATH9.2e-5875.91Actin-depolymerizing factor 8 OS=Arabidopsis thaliana OX=3702 GN=ADF8 PE=2 SV=2[more]
sp|Q9LQ81|ADF10_ARATH1.2e-5777.37Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=... [more]
BLAST of Carg24638 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6A2|A0A0A0L6A2_CUCSA5.9e-6284.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122480 PE=3 SV=1[more]
tr|A0A2I0I7L3|A0A2I0I7L3_PUNGR5.0e-6182.01Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_039640 PE=3 SV=1[more]
tr|A0A1U7ZEK8|A0A1U7ZEK8_NELNU8.6e-6184.17actin-depolymerizing factor OS=Nelumbo nucifera OX=4432 GN=LOC104592249 PE=3 SV=... [more]
tr|M5XE35|M5XE35_PRUPE1.9e-6082.73Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G165300 PE=3 SV=1[more]
tr|A0A2P6SH25|A0A2P6SH25_ROSCH3.3e-6082.73Putative ADF/Cofilin, ADF-H/Gelsolin-like domain-containing protein OS=Rosa chin... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: INTERPRO
TermDefinition
IPR017904ADF/Cofilin
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR002108ADF-H
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24638-RACarg24638-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 12..139
e-value: 1.6E-56
score: 203.8
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..135
e-value: 1.5E-36
score: 125.2
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 5..139
score: 37.637
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3DG3DSA:3.40.20.10coord: 1..138
e-value: 2.1E-51
score: 175.0
NoneNo IPR availablePANTHERPTHR11913:SF30ACTIN-DEPOLYMERIZING FACTOR 10-RELATEDcoord: 1..138
NoneNo IPR availableSUPERFAMILYSSF55753Actin depolymerizing proteinscoord: 2..137
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..138
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 6..138
e-value: 7.81719E-62
score: 187.764