CmoCh06G010820 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G010820
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Actin depolymerizing factor 8
Location	Cmo_Chr06 : 8354944 .. 8355431 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTCATGACGACTGCAAATTAAAGTTTCTGGATCTTAAAGCCAAAAGAAAGTTCAGGTTCATTGTGTTCAAGATTGATGAGAATATCCAACAGGTGATGGTCGAGCGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCACAGCCATCCCTGCTAACGAGTGTCGTTACGCTGTTTATGATTTCGATTTCACAACTGACGAGAATTGCCAAAAGAGCAAGATCTTCTTTATTGCTTGGTATTATCTCGACGTATTTATCGTACTATTTAATTTACTAACTTACGAACCTTTTTTTTTCCTTAAATTTTTGTAATTTGTTTATGTAGGTCACCCGACTCGTCGAAAATAAGAAGTAAAATGTTGTATGCGAGTTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

mRNA sequence

ATGGCAGTTCATGACGACTGCAAATTAAAGTTTCTGGATCTTAAAGCCAAAAGAAAGTTCAGGTTCATTGTGTTCAAGATTGATGAGAATATCCAACAGGTGATGGTCGAGCGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCACAGCCATCCCTGCTAACGAGTGTCGTTACGCTGTTTATGATTTCGATTTCACAACTGACGAGAATTGCCAAAAGAGCAAGATCTTCTTTATTGCTTGGTATTATCTCGACGTATTTATCGTACTATTTAATTTACTAACTTACGAACCTTTTTTTTTCCTTAAATTTTTGTCACCCGACTCGTCGAAAATAAGAAGTAAAATGTTGTATGCGAGTTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

Coding sequence (CDS)

ATGGCAGTTCATGACGACTGCAAATTAAAGTTTCTGGATCTTAAAGCCAAAAGAAAGTTCAGGTTCATTGTGTTCAAGATTGATGAGAATATCCAACAGGTGATGGTCGAGCGAGTCGGTGGTCACGATGAAACCTACAACAACTTCCTCACAGCCATCCCTGCTAACGAGTGTCGTTACGCTGTTTATGATTTCGATTTCACAACTGACGAGAATTGCCAAAAGAGCAAGATCTTCTTTATTGCTTGGTATTATCTCGACGTATTTATCGTACTATTTAATTTACTAACTTACGAACCTTTTTTTTTCCTTAAATTTTTGTCACCCGACTCGTCGAAAATAAGAAGTAAAATGTTGTATGCGAGTTCGAGGGATAGATTCAAGAGAGAATTGGATGGAATTCAAGTTGAATTACAGGCAACAGATCCCAGTGAGATGAGCATTGATATCATTAAAGCAAGAGCTATCTGA

Homology

[Close]

BLAST of CmoCh06G010820 vs. Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.2e-51
Identity = 101/155 (65.16%), Postives = 120/155 (77.42%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKF++LKAKR FRFIVFKI+E +QQV VER+G  +E+Y++F   +P NECRY
Sbjct: 8   MAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDF TDENCQKSKIFFI+W                        SPD+S++RSKMLY
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARA 156
           AS++DRFKRELDGIQVELQATDPSEMS+DIIKARA
Sbjct: 128 ASTKDRFKRELDGIQVELQATDPSEMSMDIIKARA 138

[Close]

BLAST of CmoCh06G010820 vs. Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-50
Identity = 99/156 (63.46%), Postives = 122/156 (78.21%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKFL+LKAKR FRFIVFKI+E +QQV+V+R+G   E+Y++F   +PA+ECRY
Sbjct: 8   MAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDF TDENCQKSKIFFI+W                        +PD+S++RSKMLY
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISW------------------------APDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DI+K+RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRAL 139

[Close]

BLAST of CmoCh06G010820 vs. Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-50
Identity = 100/154 (64.94%), Postives = 117/154 (75.97%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           M V D+CKLKFL+LKAKR +RFIVFKIDE  QQVM++++G  +ETY +F  +IP +ECRY
Sbjct: 8   MHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYD+DFTT ENCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVYDYDFTTPENCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKAR 155
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK R
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh06G010820 vs. Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-50
Identity = 100/156 (64.10%), Postives = 120/156 (76.92%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKF +LK+KR FRFI FKIDE  QQV+V+R+G   +TY++F  ++PA+ECRY
Sbjct: 8   MAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDF TDENCQKSKIFFI+W                        SPD+SK+RSKMLY
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISW------------------------SPDTSKVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DI+KARA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSMDIVKARAL 139

[Close]

BLAST of CmoCh06G010820 vs. Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-50
Identity = 97/154 (62.99%), Postives = 120/154 (77.92%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           M V+D+CK+KFL+LKAKR +RFIVFKIDE  QQV +E++G  +ETY++F ++IP +ECRY
Sbjct: 8   MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTT++NCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVYDFDFTTEDNCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKAR 155
           ASS+DRFKRE++GIQVELQATDPSEMS+DIIK R
Sbjct: 128 ASSKDRFKREMEGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh06G010820 vs. TrEMBL
Match: A0A0A0L6A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53
Identity = 109/156 (69.87%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHD+CKLKFLDLKAKRK+RFIVFKI+E +QQV V++VGG DETY++F  +IPANECRY
Sbjct: 8   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASIPANECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYD++FTT+ENCQKSKI+FIAW                        SPDSS+IRSKMLY
Sbjct: 68  AVYDYNFTTNENCQKSKIYFIAW------------------------SPDSSRIRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS DIIK+RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRAL 139

[Close]

BLAST of CmoCh06G010820 vs. TrEMBL
Match: A5AW33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012391 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.2e-53
Identity = 108/156 (69.23%), Postives = 123/156 (78.85%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHD+CKLKFL+LKAKR  RFIVFKIDE IQQVMVE++G  DETY +F  ++PA+ECRY
Sbjct: 8   MAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSLPADECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDFTTDENCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVFDFDFTTDENCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSMDIIKGRAL 139

[Close]

BLAST of CmoCh06G010820 vs. TrEMBL
Match: D7UC71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g03040 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.2e-53
Identity = 108/156 (69.23%), Postives = 123/156 (78.85%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHD+CKLKFL+LKAKR  RFIVFKIDE IQQVMVE++G  DETY +F  ++PA+ECRY
Sbjct: 125 MAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSLPADECRY 184

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDFTTDENCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 185 AVFDFDFTTDENCQKSKIFFIAW------------------------SPDTSRVRSKMLY 244

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK RA+
Sbjct: 245 ASSKDRFKRELDGIQVELQATDPSEMSMDIIKGRAL 256

[Close]

BLAST of CmoCh06G010820 vs. TrEMBL
Match: M5XE35_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.9e-53
Identity = 107/156 (68.59%), Postives = 125/156 (80.13%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHDDCKLKFL+LKAKR  RFIVFKI+E IQQV+VE+VGG DE+Y++F  ++PA+ECRY
Sbjct: 8   MAVHDDCKLKFLELKAKRNHRFIVFKIEEKIQQVIVEKVGGPDESYDDFAASMPADECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTT+ENCQKSKIFFIAW                        +PD+S++RSKMLY
Sbjct: 68  AVYDFDFTTNENCQKSKIFFIAW------------------------APDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRAL 139

[Close]

BLAST of CmoCh06G010820 vs. TrEMBL
Match: M0U6T4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.9e-53
Identity = 109/156 (69.87%), Postives = 122/156 (78.21%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV+D+CKLKFL+LKAKR FRFIVFKIDE IQQVMVE++G  DE+Y++F    P NECRY
Sbjct: 1   MAVNDECKLKFLELKAKRNFRFIVFKIDEKIQQVMVEKLGRPDESYDDFTACFPPNECRY 60

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDF TDENCQKSKIFFIAW                        SPDSSK+RSKMLY
Sbjct: 61  AVFDFDFVTDENCQKSKIFFIAW------------------------SPDSSKVRSKMLY 120

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMSIDI+KARA+
Sbjct: 121 ASSKDRFKRELDGIQVELQATDPSEMSIDIVKARAM 132

[Close]

BLAST of CmoCh06G010820 vs. TAIR10
Match: AT1G01750.1 (AT1G01750.1 actin depolymerizing factor 11)

HSP 1 Score: 200.3 bits (508), Expect = 8.8e-52
Identity = 100/154 (64.94%), Postives = 117/154 (75.97%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           M V D+CKLKFL+LKAKR +RFIVFKIDE  QQVM++++G  +ETY +F  +IP +ECRY
Sbjct: 8   MHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYD+DFTT ENCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVYDYDFTTPENCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKAR 155
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK R
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh06G010820 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 198.7 bits (504), Expect = 2.6e-51
Identity = 97/154 (62.99%), Postives = 120/154 (77.92%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           M V+D+CK+KFL+LKAKR +RFIVFKIDE  QQV +E++G  +ETY++F ++IP +ECRY
Sbjct: 8   MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTT++NCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVYDFDFTTEDNCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKAR 155
           ASS+DRFKRE++GIQVELQATDPSEMS+DIIK R
Sbjct: 128 ASSKDRFKREMEGIQVELQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh06G010820 vs. TAIR10
Match: AT4G25590.1 (AT4G25590.1 actin depolymerizing factor 7)

HSP 1 Score: 198.4 bits (503), Expect = 3.4e-51
Identity = 100/156 (64.10%), Postives = 120/156 (76.92%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKFL+LK+KR +RFI+F+ID   QQV+VE++G  DETY++F  ++PANECRY
Sbjct: 8   MAVEDECKLKFLELKSKRNYRFIIFRIDG--QQVVVEKLGNPDETYDDFTASLPANECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDF TDENCQKSKIFFIAW                        SPDSS++R KM+Y
Sbjct: 68  AVFDFDFITDENCQKSKIFFIAW------------------------SPDSSRVRMKMVY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS DIIK+RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRAL 137

[Close]

BLAST of CmoCh06G010820 vs. TAIR10
Match: AT5G52360.1 (AT5G52360.1 actin depolymerizing factor 10)

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-48
Identity = 98/156 (62.82%), Postives = 116/156 (74.36%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV D+CKLKFL+LKAKR +RFI+F+ID   QQV+VE++G   E Y++F   +P NECRY
Sbjct: 8   MAVEDECKLKFLELKAKRNYRFIIFRIDG--QQVVVEKLGSPQENYDDFTNYLPPNECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTT EN QKSKIFFIAW                        SPDSS++R KM+Y
Sbjct: 68  AVYDFDFTTAENIQKSKIFFIAW------------------------SPDSSRVRMKMVY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK+RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSLDIIKSRAL 137

[Close]

BLAST of CmoCh06G010820 vs. TAIR10
Match: AT3G46010.2 (AT3G46010.2 actin depolymerizing factor 1)

HSP 1 Score: 188.3 bits (477), Expect = 3.5e-48
Identity = 93/155 (60.00%), Postives = 113/155 (72.90%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHDDCKL+FL+LKAKR  RFIV+KI+E  +QV+VE+VG   +TY  F   +PA+ECRY
Sbjct: 19  MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 78

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           A+YDFDF T ENCQKSKIFFIAW                         PD +K+RSKM+Y
Sbjct: 79  AIYDFDFVTAENCQKSKIFFIAW------------------------CPDIAKVRSKMIY 138

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARA 156
           ASS+DRFKRELDGIQVELQATDP+EM +D+ ++RA
Sbjct: 139 ASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRA 149

[Close]

BLAST of CmoCh06G010820 vs. NCBI nr
Match: gi|659075277|ref|XP_008438059.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 6.1e-55
Identity = 112/156 (71.79%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHD+CKLKFLDLKAKRK+RFIVFKI+E +QQV VE+VGG DETY++F  +IPANECRY
Sbjct: 8   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVEKVGGPDETYDDFTASIPANECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYDFDFTT+ENCQKSKI+FIAW                        SPDSS+IRSKMLY
Sbjct: 68  AVYDFDFTTEENCQKSKIYFIAW------------------------SPDSSRIRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS DIIK+RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRAL 139

[Close]

BLAST of CmoCh06G010820 vs. NCBI nr
Match: gi|778677238|ref|XP_011650757.1| (PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-53
Identity = 109/156 (69.87%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHD+CKLKFLDLKAKRK+RFIVFKI+E +QQV V++VGG DETY++F  +IPANECRY
Sbjct: 8   MAVHDECKLKFLDLKAKRKYRFIVFKIEEKMQQVTVDKVGGPDETYDDFTASIPANECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AVYD++FTT+ENCQKSKI+FIAW                        SPDSS+IRSKMLY
Sbjct: 68  AVYDYNFTTNENCQKSKIYFIAW------------------------SPDSSRIRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS DIIK+RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRAL 139

[Close]

BLAST of CmoCh06G010820 vs. NCBI nr
Match: gi|719963466|ref|XP_010249803.1| (PREDICTED: actin-depolymerizing factor [Nelumbo nucifera])

HSP 1 Score: 217.2 bits (552), Expect = 2.0e-53
Identity = 110/156 (70.51%), Postives = 123/156 (78.85%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAV+DDCKLKFL+LKAKR +RFIVFKIDE IQQVMVER+G  +E+Y +F   +PANECRY
Sbjct: 8   MAVNDDCKLKFLELKAKRNYRFIVFKIDEKIQQVMVERLGNPEESYEDFTACLPANECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDFTTDENCQKSKIFFIAW                        SPD+SK+RSKMLY
Sbjct: 68  AVFDFDFTTDENCQKSKIFFIAW------------------------SPDTSKVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK RAI
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSMDIIKGRAI 139

[Close]

BLAST of CmoCh06G010820 vs. NCBI nr
Match: gi|297745256|emb|CBI40336.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 215.3 bits (547), Expect = 7.5e-53
Identity = 108/156 (69.23%), Postives = 123/156 (78.85%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHD+CKLKFL+LKAKR  RFIVFKIDE IQQVMVE++G  DETY +F  ++PA+ECRY
Sbjct: 125 MAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSLPADECRY 184

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDFTTDENCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 185 AVFDFDFTTDENCQKSKIFFIAW------------------------SPDTSRVRSKMLY 244

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK RA+
Sbjct: 245 ASSKDRFKRELDGIQVELQATDPSEMSMDIIKGRAL 256

[Close]

BLAST of CmoCh06G010820 vs. NCBI nr
Match: gi|225454162|ref|XP_002271495.1| (PREDICTED: actin-depolymerizing factor 10 [Vitis vinifera])

HSP 1 Score: 215.3 bits (547), Expect = 7.5e-53
Identity = 108/156 (69.23%), Postives = 123/156 (78.85%), Query Frame = 1


Query: 1   MAVHDDCKLKFLDLKAKRKFRFIVFKIDENIQQVMVERVGGHDETYNNFLTAIPANECRY 60
           MAVHD+CKLKFL+LKAKR  RFIVFKIDE IQQVMVE++G  DETY +F  ++PA+ECRY
Sbjct: 8   MAVHDECKLKFLELKAKRNHRFIVFKIDERIQQVMVEKLGSPDETYEDFTNSLPADECRY 67

Query: 61  AVYDFDFTTDENCQKSKIFFIAWYYLDVFIVLFNLLTYEPFFFLKFLSPDSSKIRSKMLY 120
           AV+DFDFTTDENCQKSKIFFIAW                        SPD+S++RSKMLY
Sbjct: 68  AVFDFDFTTDENCQKSKIFFIAW------------------------SPDTSRVRSKMLY 127

Query: 121 ASSRDRFKRELDGIQVELQATDPSEMSIDIIKARAI 157
           ASS+DRFKRELDGIQVELQATDPSEMS+DIIK RA+
Sbjct: 128 ASSKDRFKRELDGIQVELQATDPSEMSMDIIKGRAL 139

The following BLAST results are available for this feature:

BLAST of CmoCh06G010820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ADF_LILLO	3.2e-51	65.16	Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1	[more]
ADF1_ORYSJ	1.2e-50	63.46	Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1	[more]
ADF10_ARATH	1.6e-50	64.94	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1	[more]
ADF6_ORYSJ	1.6e-50	64.10	Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2	[more]
ADF8_ARATH	4.6e-50	62.99	Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2	[more]

BLAST of CmoCh06G010820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6A2_CUCSA	1.1e-53	69.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122480 PE=3 SV=1	[more]
A5AW33_VITVI	5.2e-53	69.23	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012391 PE=3 SV=1	[more]
D7UC71_VITVI	5.2e-53	69.23	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g03040 PE=3 SV=...	[more]
M5XE35_PRUPE	8.9e-53	68.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013108mg PE=3 SV=1	[more]
M0U6T4_MUSAM	8.9e-53	69.87	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]

BLAST of CmoCh06G010820 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01750.1	8.8e-52	64.94	actin depolymerizing factor 11	[more]
AT4G00680.1	2.6e-51	62.99	actin depolymerizing factor 8	[more]
AT4G25590.1	3.4e-51	64.10	actin depolymerizing factor 7	[more]
AT5G52360.1	1.2e-48	62.82	actin depolymerizing factor 10	[more]
AT3G46010.2	3.5e-48	60.00	actin depolymerizing factor 1	[more]

BLAST of CmoCh06G010820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075277\|ref\|XP_008438059.1\|	6.1e-55	71.79	PREDICTED: actin-depolymerizing factor 7-like [Cucumis melo]	[more]
gi\|778677238\|ref\|XP_011650757.1\|	1.5e-53	69.87	PREDICTED: actin-depolymerizing factor 7-like [Cucumis sativus]	[more]
gi\|719963466\|ref\|XP_010249803.1\|	2.0e-53	70.51	PREDICTED: actin-depolymerizing factor [Nelumbo nucifera]	[more]
gi\|297745256\|emb\|CBI40336.3\|	7.5e-53	69.23	unnamed protein product [Vitis vinifera]	[more]
gi\|225454162\|ref\|XP_002271495.1\|	7.5e-53	69.23	PREDICTED: actin-depolymerizing factor 10 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002108	ADF-H
IPR017904	ADF/Cofilin

Vocabulary: **Molecular Function**
Term	Definition
GO:0003779	actin binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0015629	actin cytoskeleton

Vocabulary: **Biological Process**
Term	Definition
GO:0030042	actin filament depolymerization

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003779	actin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G010820.1	CmoCh06G010820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 7..152 score: 7.8
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 5..156 score: 7.3
IPR002108	Actin-depolymerising factor homology domain	PROFILE	PS51263	ADF_H	coord: 1..156 score: 28
IPR017904	ADF/Cofilin/Destrin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..83 score: 3.4E-87coord: 108..155 score: 3.4
None	No IPR available	PANTHER	PTHR11913:SF30	ACTIN-DEPOLYMERIZING FACTOR 10-RELATED	coord: 1..83 score: 3.4E-87coord: 108..155 score: 3.4
None	No IPR available	unknown	SSF55753	Actin depolymerizing proteins	coord: 2..154 score: 7.24

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G010820	CmaCh14G020300	Cucurbita maxima (Rimu)	cmacmoB269
CmoCh06G010820	CmaCh06G010610	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G010820	Cla021242	Watermelon (97103) v1	cmowmB794
CmoCh06G010820	Lsi05G020310	Bottle gourd (USVL1VR-Ls)	cmolsiB753
CmoCh06G010820	Cp4.1LG03g16770	Cucurbita pepo (Zucchini)	cmocpeB784
CmoCh06G010820	Cp4.1LG08g01220	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G010820	MELO3C006118.2	Melon (DHL92) v3.6.1	cmomedB863
CmoCh06G010820	CsaV3_3G009000	Cucumber (Chinese Long) v3	cmocucB0964
CmoCh06G010820	Cla97C05G082010	Watermelon (97103) v2	cmowmbB834
CmoCh06G010820	Bhi01G000263	Wax gourd	cmowgoB1016
CmoCh06G010820	Carg24638	Silver-seed gourd	carcmoB0521
CmoCh06G010820	Carg21008	Silver-seed gourd	carcmoB0666

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh06G010820	CmoCh14G020920	Cucurbita moschata (Rifu)	cmocmoB223

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G010820	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G010820	Cucumber (Chinese Long) v2	cmocuB818
CmoCh06G010820	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G010820	Melon (DHL92) v3.5.1	cmomeB759
CmoCh06G010820	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G010820	Watermelon (Charleston Gray)	cmowcgB744
CmoCh06G010820	Watermelon (97103) v1	cmowmB793
CmoCh06G010820	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G010820	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G010820	Cucumber (Gy14) v2	cgybcmoB412
CmoCh06G010820	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G010820	Silver-seed gourd	carcmoB0665
CmoCh06G010820	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G010820	Watermelon (97103) v2	cmowmbB833
CmoCh06G010820	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh06G010820	Cucumber (Gy14) v1	cgycmoB0717
CmoCh06G010820	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G010820	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G010820	Cucurbita maxima (Rimu)	cmacmoB831
CmoCh06G010820	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G010820	Wild cucumber (PI 183967)	cmocpiB826