Cp4.1LG05g06430 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g06430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionActin-depolymerizing factor family protein
LocationCp4.1LG05 : 3972920 .. 3973678 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCCCAATCCATTCCTTTCCTCCTCTATTTCTCTCTTTCTTCATCTCCCTTTCCCATACTACACTCTTTCCCTCCTTCCTCCCCCACAACAAGACAACATGGTATGCCTTTCTCGTACTTGTTCTTCCGTTATTATGATTATCGATCGAACGGTAAAAACTATGTTTACTTTCTCATCGTTTGTTTGTTGGGTAATGTTTGTTGAATTAGGCGAACTCAGCATCTGGAATGACCGTGAGAGATGAATGTAAGTTGAAGTTCTTAGAGCTGAAAGCAAAGAGAAACTACAGGTTCATCATCTTCAAGATTGAACAACAGGAAATTGTGGTAGAGAAACTCGGAAAACCTGAAGAAACATACGAGGATTTCACTGGATCTCTCCCTGCCGATGAGTGTCGCTATGCTGTCTTTGATTTTGACTTCATCACTGATGAGAATTGCCAGAAGAGCAAGATTTTCTTCATTGCATGGTAAACATCAATCGTGGGTTCAACCTAAAAATTGTTCTTTACTAATATGTTTGACGTATAGGTCGCCCGAGACATCAAAGGTGAGGGGGAAGATGGTGTATGCGAGCTCGAAGGATAGGTTCAAGAGAGAGCTAGATGGCATTCAATTTGAGTTGCAGGCAACCGATCCGAGTGAGATGAGCTTTGACATTGTCAAGGCACGGGCATTTTAGATGCCGACAAGAAGAAGCTGTCTGTGGCTCGTTTGTGTTTGGTCCAAGTTCATGTGGGATGGTTTGTTATTGAACG

mRNA sequence

CCTCCCAATCCATTCCTTTCCTCCTCTATTTCTCTCTTTCTTCATCTCCCTTTCCCATACTACACTCTTTCCCTCCTTCCTCCCCCACAACAAGACAACATGGCGAACTCAGCATCTGGAATGACCGTGAGAGATGAATGTAAGTTGAAGTTCTTAGAGCTGAAAGCAAAGAGAAACTACAGGTTCATCATCTTCAAGATTGAACAACAGGAAATTGTGGTAGAGAAACTCGGAAAACCTGAAGAAACATACGAGGATTTCACTGGATCTCTCCCTGCCGATGAGTGTCGCTATGCTGTCTTTGATTTTGACTTCATCACTGATGAGAATTGCCAGAAGAGCAAGATTTTCTTCATTGCATGGTCGCCCGAGACATCAAAGGTGAGGGGGAAGATGGTGTATGCGAGCTCGAAGGATAGGTTCAAGAGAGAGCTAGATGGCATTCAATTTGAGTTGCAGGCAACCGATCCGAGTGAGATGAGCTTTGACATTGTCAAGGCACGGGCATTTTAGATGCCGACAAGAAGAAGCTGTCTGTGGCTCGTTTGTGTTTGGTCCAAGTTCATGTGGGATGGTTTGTTATTGAACG

Coding sequence (CDS)

ATGGCGAACTCAGCATCTGGAATGACCGTGAGAGATGAATGTAAGTTGAAGTTCTTAGAGCTGAAAGCAAAGAGAAACTACAGGTTCATCATCTTCAAGATTGAACAACAGGAAATTGTGGTAGAGAAACTCGGAAAACCTGAAGAAACATACGAGGATTTCACTGGATCTCTCCCTGCCGATGAGTGTCGCTATGCTGTCTTTGATTTTGACTTCATCACTGATGAGAATTGCCAGAAGAGCAAGATTTTCTTCATTGCATGGTCGCCCGAGACATCAAAGGTGAGGGGGAAGATGGTGTATGCGAGCTCGAAGGATAGGTTCAAGAGAGAGCTAGATGGCATTCAATTTGAGTTGCAGGCAACCGATCCGAGTGAGATGAGCTTTGACATTGTCAAGGCACGGGCATTTTAG

Protein sequence

MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPADECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQATDPSEMSFDIVKARAF
Homology
[Close]
BLAST of Cp4.1LG05g06430 vs. Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 5.4e-63
Identity = 115/136 (84.56%), Postives = 129/136 (94.85%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM V DECKLKFLELK+KRNYRFIIF+I+ Q++VVEKLG P+ETY+DFT SLPA
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDFITDENCQKSKIFFIAWSP++S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARA 137
           ATDPSEMSFDI+K+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]
BLAST of Cp4.1LG05g06430 vs. Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 4.7e-59
Identity = 108/139 (77.70%), Postives = 127/139 (91.37%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQ--QEIVVEKLGKPEETYEDFTGSL 60
           MANS+SGM V DECKLKF+ELKAKRN+RFI+FKIE+  Q++ VE+LG+P E+Y+DFT  L
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFE 120
           P +ECRYAVFDFDF+TDENCQKSKIFFI+WSP+TS+VR KM+YAS+KDRFKRELDGIQ E
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKARAF 138
           LQATDPSEMS DI+KARAF
Sbjct: 121 LQATDPSEMSMDIIKARAF 139

[Close]
BLAST of Cp4.1LG05g06430 vs. Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.2e-59
Identity = 109/137 (79.56%), Postives = 124/137 (90.51%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQ--QEIVVEKLGKPEETYEDFTGSL 60
           MANSASGM V DECKLKFLELKAKRNYRFI+FKI++  Q+++++KLG PEETYEDFT S+
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+D+DF T ENCQKSKIFFIAWSP+TS+VR KM+YASSKDRFKRELDGIQ E
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKAR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Cp4.1LG05g06430 vs. Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-58
Identity = 109/138 (78.99%), Postives = 126/138 (91.30%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQ--QEIVVEKLGKPEETYEDFTGSL 60
           MANSASGM V DECKLKF ELK+KR++RFI FKI++  Q++VV++LG+P +TY+DFT S+
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFE 120
           PA ECRYAVFDFDF+TDENCQKSKIFFI+WSP+TSKVR KM+YASSKDRFKRELDGIQ E
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKARA 137
           LQATDPSEMS DIVKARA
Sbjct: 121 LQATDPSEMSMDIVKARA 138

[Close]
BLAST of Cp4.1LG05g06430 vs. Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-58
Identity = 108/138 (78.26%), Postives = 127/138 (92.03%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQ--QEIVVEKLGKPEETYEDFTGSL 60
           M+NSASGM V DECKLKFLELKAKR++RFI+FKI +  Q++VV++LG+P E+Y+DFT  L
Sbjct: 1   MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFE 120
           PADECRYAVFDFDF+TDENCQKSKIFFI+W+P+TS+VR KM+YASSKDRFKRELDGIQ E
Sbjct: 61  PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKARA 137
           LQATDPSEMS DIVK+RA
Sbjct: 121 LQATDPSEMSMDIVKSRA 138

[Close]
BLAST of Cp4.1LG05g06430 vs. TrEMBL
Match: A0A0A0KKY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165880 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 8.6e-68
Identity = 129/137 (94.16%), Postives = 134/137 (97.81%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM VRDECKLKFLELKAKRNYRFIIFKIEQQE+VVEKLG+P+ETYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSP+ SKVR KMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]
BLAST of Cp4.1LG05g06430 vs. TrEMBL
Match: A0A0A0LBE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182120 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.7e-63
Identity = 120/137 (87.59%), Postives = 129/137 (94.16%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM VRDECKLKFLELK KRNYRFIIFKIE QE+VVEKLG PEETY+DF+ ++PA
Sbjct: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDF TDENCQKSKIFFIAWSP+TSKVR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDI+KARAF
Sbjct: 121 ATDPSEMSFDIIKARAF 137

[Close]
BLAST of Cp4.1LG05g06430 vs. TrEMBL
Match: Q8H2B6_TOBAC (Pollen specific actin-depolymerizing factor 2 (Fragment) OS=Nicotiana tabacum GN=ADF2 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.4e-62
Identity = 119/136 (87.50%), Postives = 127/136 (93.38%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM V DECKLKFLELKAKRNYRFI+FKIE Q++VVEKLG PEE Y+DFT SLPA
Sbjct: 1   MANAASGMAVLDECKLKFLELKAKRNYRFIVFKIEGQQVVVEKLGNPEENYDDFTNSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFIT ENCQKSKIFFIAWSP+TSKVR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  DECRYAVFDFDFITTENCQKSKIFFIAWSPDTSKVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARA 137
           ATDPSEMSFDI+K+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]
BLAST of Cp4.1LG05g06430 vs. TrEMBL
Match: A0A0D2SPX7_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G198000 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.4e-62
Identity = 116/135 (85.93%), Postives = 128/135 (94.81%), Query Frame = 1 

Query: 2   ANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPAD 61
           AN+ASGM V DECKLKFLELKAKRNYRFI+FKI++Q++VVEK+G P+ETYEDFT +LPAD
Sbjct: 1   ANAASGMAVDDECKLKFLELKAKRNYRFIVFKIQEQQVVVEKVGSPQETYEDFTAALPAD 60

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQA 121
           ECRYAVFDFDF TDENCQKSKIFFIAWSP+TS+VR KMVYASSKDRFKRELDGIQ ELQA
Sbjct: 61  ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMVYASSKDRFKRELDGIQVELQA 120

Query: 122 TDPSEMSFDIVKARA 137
           TDPSEMSFDI+KARA
Sbjct: 121 TDPSEMSFDIIKARA 135

[Close]
BLAST of Cp4.1LG05g06430 vs. TrEMBL
Match: B9ID88_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13080g PE=3 SV=2)

HSP 1 Score: 244.2 bits (622), Expect = 9.2e-62
Identity = 117/136 (86.03%), Postives = 128/136 (94.12%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM V DECKLKFLELKAKRNYRFIIFKIE Q++VVEKLG PEETYE+F  SLPA
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRNYRFIIFKIESQQVVVEKLGSPEETYEEFAASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFD+DFIT+ENCQKSKIFFIAWSP+TS+VR KMVYASS+DRFKRELDGIQ ELQ
Sbjct: 61  DECRYAVFDYDFITNENCQKSKIFFIAWSPDTSRVRSKMVYASSRDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARA 137
           ATDPSEMSFDI+K+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]
BLAST of Cp4.1LG05g06430 vs. TAIR10
Match: AT4G25590.1 (AT4G25590.1 actin depolymerizing factor 7)

HSP 1 Score: 241.5 bits (615), Expect = 3.0e-64
Identity = 115/136 (84.56%), Postives = 129/136 (94.85%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM V DECKLKFLELK+KRNYRFIIF+I+ Q++VVEKLG P+ETY+DFT SLPA
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDFITDENCQKSKIFFIAWSP++S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARA 137
           ATDPSEMSFDI+K+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]
BLAST of Cp4.1LG05g06430 vs. TAIR10
Match: AT1G01750.1 (AT1G01750.1 actin depolymerizing factor 11)

HSP 1 Score: 228.0 bits (580), Expect = 3.5e-60
Identity = 109/137 (79.56%), Postives = 124/137 (90.51%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQ--QEIVVEKLGKPEETYEDFTGSL 60
           MANSASGM V DECKLKFLELKAKRNYRFI+FKI++  Q+++++KLG PEETYEDFT S+
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+D+DF T ENCQKSKIFFIAWSP+TS+VR KM+YASSKDRFKRELDGIQ E
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKAR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Cp4.1LG05g06430 vs. TAIR10
Match: AT5G52360.1 (AT5G52360.1 actin depolymerizing factor 10)

HSP 1 Score: 224.2 bits (570), Expect = 5.0e-59
Identity = 108/136 (79.41%), Postives = 122/136 (89.71%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM V DECKLKFLELKAKRNYRFIIF+I+ Q++VVEKLG P+E Y+DFT  LP 
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAV+DFDF T EN QKSKIFFIAWSP++S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARA 137
           ATDPSEMS DI+K+RA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]
BLAST of Cp4.1LG05g06430 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 223.4 bits (568), Expect = 8.5e-59
Identity = 105/137 (76.64%), Postives = 123/137 (89.78%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQ--QEIVVEKLGKPEETYEDFTGSL 60
           MANSASGM V DECK+KFLELKAKR YRFI+FKI++  Q++ +EKLG PEETY+DFT S+
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+DFDF T++NCQKSKIFFIAWSP+TS+VR KM+YASSKDRFKRE++GIQ E
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSFDIVKAR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of Cp4.1LG05g06430 vs. TAIR10
Match: AT3G46000.1 (AT3G46000.1 actin depolymerizing factor 2)

HSP 1 Score: 217.6 bits (553), Expect = 4.7e-57
Identity = 97/135 (71.85%), Postives = 121/135 (89.63%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM V D+CKLKF+ELKAKR +R I++KIE ++++VEKLG+PE++Y+DF  SLPA
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           D+CRY ++DFDF+T ENCQKSKIFFIAWSP+T+KVR KM+YASSKDRFKRELDGIQ ELQ
Sbjct: 61  DDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKAR 136
           ATDP+EM  D+ K+R
Sbjct: 121 ATDPTEMGLDVFKSR 135

[Close]
BLAST of Cp4.1LG05g06430 vs. NCBI nr
Match: gi|659073369|ref|XP_008437023.1| (PREDICTED: actin-depolymerizing factor 7 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 9.5e-68
Identity = 129/137 (94.16%), Postives = 134/137 (97.81%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM VRDECKLKFLELKAKRNYRFIIFKIEQQE+VVEKLG+P+ETYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSP+ SKVR KMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]
BLAST of Cp4.1LG05g06430 vs. NCBI nr
Match: gi|778700193|ref|XP_004152385.2| (PREDICTED: actin-depolymerizing factor 7 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-67
Identity = 129/137 (94.16%), Postives = 134/137 (97.81%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM VRDECKLKFLELKAKRNYRFIIFKIEQQE+VVEKLG+P+ETYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSP+ SKVR KMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDIVKARAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]
BLAST of Cp4.1LG05g06430 vs. NCBI nr
Match: gi|659077480|ref|XP_008439227.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 8.3e-64
Identity = 121/136 (88.97%), Postives = 129/136 (94.85%), Query Frame = 1 

Query: 2   ANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPAD 61
           AN+ASGM VRDECKLKFLELKAKRNYRFIIFKIE QE+VVEKLG PEETY+DFT ++PA+
Sbjct: 251 ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPAN 310

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQA 121
           ECRYAVFDFDF TDENCQKSKIFFIAWSP+TSKVR KMVYASSKDRFKRELDGIQ ELQA
Sbjct: 311 ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 370

Query: 122 TDPSEMSFDIVKARAF 138
           TDPSEMSFDI+KARAF
Sbjct: 371 TDPSEMSFDIIKARAF 386

[Close]
BLAST of Cp4.1LG05g06430 vs. NCBI nr
Match: gi|778688554|ref|XP_011652775.1| (PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 2.4e-63
Identity = 120/137 (87.59%), Postives = 129/137 (94.16%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM VRDECKLKFLELK KRNYRFIIFKIE QE+VVEKLG PEETY+DF+ ++PA
Sbjct: 293 MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPA 352

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDF TDENCQKSKIFFIAWSP+TSKVR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 353 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 412

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDI+KARAF
Sbjct: 413 ATDPSEMSFDIIKARAF 429

[Close]
BLAST of Cp4.1LG05g06430 vs. NCBI nr
Match: gi|700202243|gb|KGN57376.1| (hypothetical protein Csa_3G182120 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 2.4e-63
Identity = 120/137 (87.59%), Postives = 129/137 (94.16%), Query Frame = 1 

Query: 1   MANSASGMTVRDECKLKFLELKAKRNYRFIIFKIEQQEIVVEKLGKPEETYEDFTGSLPA 60
           MAN+ASGM VRDECKLKFLELK KRNYRFIIFKIE QE+VVEKLG PEETY+DF+ ++PA
Sbjct: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPETSKVRGKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDF TDENCQKSKIFFIAWSP+TSKVR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKARAF 138
           ATDPSEMSFDI+KARAF
Sbjct: 121 ATDPSEMSFDIIKARAF 137

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g06430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ADF7_ARATH5.4e-6384.56Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1[more]
ADF_LILLO4.7e-5977.70Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1[more]
ADF10_ARATH6.2e-5979.56Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1[more]
ADF6_ORYSJ1.8e-5878.99Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2[more]
ADF1_ORYSJ1.8e-5878.26Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1[more]
BLAST of Cp4.1LG05g06430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKY8_CUCSA8.6e-6894.16Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165880 PE=3 SV=1[more]
A0A0A0LBE8_CUCSA1.7e-6387.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182120 PE=3 SV=1[more]
Q8H2B6_TOBAC5.4e-6287.50Pollen specific actin-depolymerizing factor 2 (Fragment) OS=Nicotiana tabacum GN... [more]
A0A0D2SPX7_GOSRA5.4e-6285.93Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G198000 PE=... [more]
B9ID88_POPTR9.2e-6286.03Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13080g PE=3 SV=2[more]
BLAST of Cp4.1LG05g06430 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25590.13.0e-6484.56 actin depolymerizing factor 7[more]
AT1G01750.13.5e-6079.56 actin depolymerizing factor 11[more]
AT5G52360.15.0e-5979.41 actin depolymerizing factor 10[more]
AT4G00680.18.5e-5976.64 actin depolymerizing factor 8[more]
AT3G46000.14.7e-5771.85 actin depolymerizing factor 2[more]
BLAST of Cp4.1LG05g06430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659073369|ref|XP_008437023.1|9.5e-6894.16PREDICTED: actin-depolymerizing factor 7 [Cucumis melo][more]
gi|778700193|ref|XP_004152385.2|1.2e-6794.16PREDICTED: actin-depolymerizing factor 7 [Cucumis sativus][more]
gi|659077480|ref|XP_008439227.1|8.3e-6488.97PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis me... [more]
gi|778688554|ref|XP_011652775.1|2.4e-6387.59PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus][more]
gi|700202243|gb|KGN57376.1|2.4e-6387.59hypothetical protein Csa_3G182120 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: INTERPRO
TermDefinition
IPR017904ADF/Cofilin
IPR002108ADF-H
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
biological_process GO:0050832 defense response to fungus
biological_process GO:0010214 seed coat development
biological_process GO:0009735 response to cytokinin
biological_process GO:0046686 response to cadmium ion
biological_process GO:0033611 oxalate catabolic process
biological_process GO:0010030 positive regulation of seed germination
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005884 actin filament
cellular_component GO:0048046 apoplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005829 cytosol
cellular_component GO:0009506 plasmodesma
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003779 actin binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0008756 o-succinylbenzoate-CoA ligase activity
molecular_function GO:0050203 oxalate-CoA ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g06430.1Cp4.1LG05g06430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..133
score: 1.7
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 12..137
score: 4.2
IPR002108Actin-depolymerising factor homology domainPROFILEPS51263ADF_Hcoord: 6..137
score: 35
IPR017904ADF/Cofilin/DestrinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..136
score: 3.7E
NoneNo IPR availablePANTHERPTHR11913:SF30ACTIN-DEPOLYMERIZING FACTOR 10-RELATEDcoord: 1..136
score: 3.7E
NoneNo IPR availableunknownSSF55753Actin depolymerizing proteinscoord: 3..135
score: 1.55

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g06430Cucsa.129600Cucumber (Gy14) v1cgycpeB0342
Cp4.1LG05g06430CmaCh02G010680Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g06430CmaCh15G010980Cucurbita maxima (Rimu)cmacpeB330
Cp4.1LG05g06430CmaCh16G001250Cucurbita maxima (Rimu)cmacpeB358
Cp4.1LG05g06430CmaCh18G012480Cucurbita maxima (Rimu)cmacpeB453
Cp4.1LG05g06430CmoCh18G012710Cucurbita moschata (Rifu)cmocpeB414
Cp4.1LG05g06430CmoCh15G011560Cucurbita moschata (Rifu)cmocpeB293
Cp4.1LG05g06430CmoCh16G001310Cucurbita moschata (Rifu)cmocpeB322
Cp4.1LG05g06430CmoCh02G010860Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g06430Cla003643Watermelon (97103) v1cpewmB714
Cp4.1LG05g06430Cla006177Watermelon (97103) v1cpewmB705
Cp4.1LG05g06430Csa3G182120Cucumber (Chinese Long) v2cpecuB725
Cp4.1LG05g06430Csa5G165880Cucumber (Chinese Long) v2cpecuB741
Cp4.1LG05g06430MELO3C006910Melon (DHL92) v3.5.1cpemeB701
Cp4.1LG05g06430ClCG05G008060Watermelon (Charleston Gray)cpewcgB678
Cp4.1LG05g06430CSPI05G07190Wild cucumber (PI 183967)cpecpiB743
Cp4.1LG05g06430CSPI03G16950Wild cucumber (PI 183967)cpecpiB725
Cp4.1LG05g06430Lsi09G004640Bottle gourd (USVL1VR-Ls)cpelsiB587
Cp4.1LG05g06430Lsi05G012250Bottle gourd (USVL1VR-Ls)cpelsiB618
Cp4.1LG05g06430CsaV3_5G004630Cucumber (Chinese Long) v3cpecucB0920
Cp4.1LG05g06430CsaV3_3G017120Cucumber (Chinese Long) v3cpecucB0903
Cp4.1LG05g06430Bhi01G000956Wax gourdcpewgoB0925
Cp4.1LG05g06430CsGy5G004600Cucumber (Gy14) v2cgybcpeB695
Cp4.1LG05g06430Carg15135Silver-seed gourdcarcpeB1377
Cp4.1LG05g06430Carg08410Silver-seed gourdcarcpeB1002
Cp4.1LG05g06430Carg23185Silver-seed gourdcarcpeB0767
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g06430Cp4.1LG09g00850Cucurbita pepo (Zucchini)cpecpeB057
Cp4.1LG05g06430Cp4.1LG13g02480Cucurbita pepo (Zucchini)cpecpeB227
Cp4.1LG05g06430Cp4.1LG14g06100Cucurbita pepo (Zucchini)cpecpeB245
Cp4.1LG05g06430Cp4.1LG03g16770Cucurbita pepo (Zucchini)cpecpeB479
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g06430Cucumber (Gy14) v1cgycpeB0244
Cp4.1LG05g06430Melon (DHL92) v3.6.1cpemedB835