CmoCh15G011560 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G011560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Actin depolymerizing factor 7
Location	Cmo_Chr15 : 8081976 .. 8083466 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATGTTCTTTCTCTCTTATCTTTCAACCATGTGTTCATTCCCGACCACCCGACAACCTCGTTTCATAATCATTCATTTCACGTTTTATTCTTAAAGTGTTGATTATAGTTAAATCTACCGTGACCCATTTGCTTAAACTTCTGGGTCGATTAGTGATTTGACATGGTATTAGCGTTTATATTTCATTTCGCGTTTATCTTATTTGTTTGATGTTGAGCGTAGGCGAACGCTGCGTCTGGCATGGCTGTGAGAGATGAGTGTAAATTGAAGTTTTTGGAGTTAAAAGCAAAGAGAAACTACAGGTTCATCACTTTCAAGATCGAAGAACAAGAAGTGGTGATAGACAAATTGGGAAAACCGGACTCAACATATGAGGATTTCACTGGATCTCTCCCTGCTGACGAGTGTCGCTATGCTGTCTTTGATTTCGATTTCATTACTGACGAGAATTGCCAAAAGAGCAAGATTTTCTTCATTGCATGGTACGTTACTAATATTTTCAATCCAACCCGAAAATAACCTGGTGGATAAGACATCAAACATTACCACACAAAGGTATATGTCTCAACCATCTGAGTTATGTTCCGGTTGGCCACAAATAGTTTAACCTAACCTAGAAACGATGAACTATACATGTGTGACACTACCAATTCAAGTATAGCTCAATGCATAAGACATCAAAACCATCATTTGAAAGGTCGGCATGCTTTGATCTTCCACACCCAACAACAATTTGAAACAGGGCAGATTCAAACCAAGTATATGTCTAAACGAGTCGAACGATGCTTAAGCTTGCCATAAATCGTTTAACCACGATATTCATTGATATTGTGATGTCCCACATTAGTTGGAGAGGAGAACAAACCACCCTTTATAAGGGTGTGGAAACCTTCTCTAGCAGACGCGTTTTAAAGCCTTGAGGGAAAACCCGAAAGGGAAAGACCAAAGAGGACAATATTTGCTAGCGGTGGATCTGGGCCGTTACAAATGGTATCAGAGCCAGACACCGGATGATGTGCCCGCCTTCTCCCTATTCCCCGAAAGGAGGTAGACACGAGGCGGTGTGCCAATAAGGACGCTAGGCCCCAAAGGGATGTGGATTTGGGGGCGATCCCACATCGATTAGAGAAAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCCGACGCGTTTTAAAGCCTTGAGGGGAAACCCTAAAGAGGACAACATGAACCGTTACAGATATACCTAGGTTTGAGTCTTGTTGAATAGCTGCGTTTTCTTACTCGTTTTATTACGATATATATAATACGTTATCTAAACGATGGTACGTTGAGAAATAGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAATTGGATGGTATTCAATTTGAGTTGCAAGCAACGGATCCAAGTGAGATGAGCTTTGACATTGTCAAGTCACGTGCATTTTAG

mRNA sequence

ATGGCGAACGCTGCGTCTGGCATGGCTGTGAGAGATGAGTGTAAATTGAAGTTTTTGGAGTTAAAAGCAAAGAGAAACTACAGGTTCATCACTTTCAAGATCGAAGAACAAGAAGTGGTGATAGACAAATTGGGAAAACCGGACTCAACATATGAGGATTTCACTGGATCTCTCCCTGCTGACGAGTGTCGCTATGCTGTCTTTGATTTCGATTTCATTACTGACGAGAATTGCCAAAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAATTGGATGGTATTCAATTTGAGTTGCAAGCAACGGATCCAAGTGAGATGAGCTTTGACATTGTCAAGTCACGTGCATTTTAG

Coding sequence (CDS)

ATGGCGAACGCTGCGTCTGGCATGGCTGTGAGAGATGAGTGTAAATTGAAGTTTTTGGAGTTAAAAGCAAAGAGAAACTACAGGTTCATCACTTTCAAGATCGAAGAACAAGAAGTGGTGATAGACAAATTGGGAAAACCGGACTCAACATATGAGGATTTCACTGGATCTCTCCCTGCTGACGAGTGTCGCTATGCTGTCTTTGATTTCGATTTCATTACTGACGAGAATTGCCAAAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAATTGGATGGTATTCAATTTGAGTTGCAAGCAACGGATCCAAGTGAGATGAGCTTTGACATTGTCAAGTCACGTGCATTTTAG

Homology

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BLAST of CmoCh15G011560 vs. Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.8e-63
Identity = 117/136 (86.03%), Postives = 127/136 (93.38%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAV DECKLKFLELK+KRNYRFI F+I+ Q+VV++KLG PD TY+DFT SLPA
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDFITDENCQKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKSRA 137
           ATDPSEMSFDI+KSRA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of CmoCh15G011560 vs. Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 231.1 bits (588), Expect = 7.3e-60
Identity = 112/138 (81.16%), Postives = 127/138 (92.03%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN+ASGMAV DECKLKF ELK+KR++RFITFKI+E  Q+VV+D+LG+P  TY+DFT S+
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           PA ECRYAVFDFDF+TDENCQKSKIFFI+WSPD SKVRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSRA 137
           LQATDPSEMS DIVK+RA
Sbjct: 121 LQATDPSEMSMDIVKARA 138

[Close]

BLAST of CmoCh15G011560 vs. Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.6e-59
Identity = 111/138 (80.43%), Postives = 126/138 (91.30%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           M+N+ASGMAV DECKLKFLELKAKR++RFI FKI E  Q+VV+D+LG+P  +Y+DFT  L
Sbjct: 1   MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           PADECRYAVFDFDF+TDENCQKSKIFFI+W+PD S+VRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSRA 137
           LQATDPSEMS DIVKSRA
Sbjct: 121 LQATDPSEMSMDIVKSRA 138

[Close]

BLAST of CmoCh15G011560 vs. Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-58
Identity = 111/137 (81.02%), Postives = 122/137 (89.05%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN+ASGM V DECKLKFLELKAKRNYRFI FKI+E  Q+V+IDKLG P+ TYEDFT S+
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+D+DF T ENCQKSKIFFIAWSPD S+VRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh15G011560 vs. Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.1e-58
Identity = 107/139 (76.98%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN++SGMAV DECKLKF+ELKAKRN+RFI FKIEE  Q+V +++LG+P+ +Y+DFT  L
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P +ECRYAVFDFDF+TDENCQKSKIFFI+WSPD S+VRSKM+YAS+KDRFKRELDGIQ E
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSRAF 138
           LQATDPSEMS DI+K+RAF
Sbjct: 121 LQATDPSEMSMDIIKARAF 139

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BLAST of CmoCh15G011560 vs. TrEMBL
Match: A0A0A0KKY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165880 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.3e-68
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELKAKRNYRFI FKIE+QEVV++KLG+PD TYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDIVK+RAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of CmoCh15G011560 vs. TrEMBL
Match: A0A0A0LBE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182120 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.4e-62
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELK KRNYRFI FKIE QEVV++KLG P+ TY+DF+ ++PA
Sbjct: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDF TDENCQKSKIFFIAWSPD SKVR+KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDI+K+RAF
Sbjct: 121 ATDPSEMSFDIIKARAF 137

[Close]

BLAST of CmoCh15G011560 vs. TrEMBL
Match: A0A103YJ79_CYNCS (Actin-binding, cofilin/tropomyosin type OS=Cynara cardunculus var. scolymus GN=Ccrd_011462 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 7.1e-62
Identity = 117/135 (86.67%), Postives = 125/135 (92.59%), Query Frame = 1


Query: 2   ANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPAD 61
           AN+ASGMAV D+CKLKFLELKAKRNYRFITFKIEEQ+V++DK+G PD TYEDFT SLP D
Sbjct: 250 ANSASGMAVHDDCKLKFLELKAKRNYRFITFKIEEQQVIVDKIGGPDQTYEDFTNSLPGD 309

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121
           ECRYAVFDFDF TDENCQKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQA
Sbjct: 310 ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRMKMVYASSKDRFKRELDGIQVELQA 369

Query: 122 TDPSEMSFDIVKSRA 137
           TDPSEMS DI+KSRA
Sbjct: 370 TDPSEMSLDIIKSRA 384

[Close]

BLAST of CmoCh15G011560 vs. TrEMBL
Match: A0A103YDM7_CYNCS (Actin-binding, cofilin/tropomyosin type OS=Cynara cardunculus var. scolymus GN=Ccrd_014482 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.2e-62
Identity = 118/136 (86.76%), Postives = 126/136 (92.65%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAV DECKLKFLELKA+R YRFIT+KIE+Q+V++DK+G  D TYEDFT SLPA
Sbjct: 47  MANAASGMAVDDECKLKFLELKARRTYRFITYKIEDQQVIVDKIGGTDQTYEDFTNSLPA 106

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDF TDENCQKSKIFFIAWSPD SKVR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 107 DECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRMKMVYASSKDRFKRELDGIQVELQ 166

Query: 121 ATDPSEMSFDIVKSRA 137
           ATDPSEMSFDI+KSRA
Sbjct: 167 ATDPSEMSFDIIKSRA 182

[Close]

BLAST of CmoCh15G011560 vs. TrEMBL
Match: A0A0D2SPX7_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G198000 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-61
Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 1


Query: 2   ANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPAD 61
           ANAASGMAV DECKLKFLELKAKRNYRFI FKI+EQ+VV++K+G P  TYEDFT +LPAD
Sbjct: 1   ANAASGMAVDDECKLKFLELKAKRNYRFIVFKIQEQQVVVEKVGSPQETYEDFTAALPAD 60

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121
           ECRYAVFDFDF TDENCQKSKIFFIAWSPD S+VRSKMVYASSKDRFKRELDGIQ ELQA
Sbjct: 61  ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMVYASSKDRFKRELDGIQVELQA 120

Query: 122 TDPSEMSFDIVKSRA 137
           TDPSEMSFDI+K+RA
Sbjct: 121 TDPSEMSFDIIKARA 135

[Close]

BLAST of CmoCh15G011560 vs. TAIR10
Match: AT4G25590.1 (AT4G25590.1 actin depolymerizing factor 7)

HSP 1 Score: 243.0 bits (619), Expect = 1.0e-64
Identity = 117/136 (86.03%), Postives = 127/136 (93.38%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAV DECKLKFLELK+KRNYRFI F+I+ Q+VV++KLG PD TY+DFT SLPA
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDFITDENCQKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKSRA 137
           ATDPSEMSFDI+KSRA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of CmoCh15G011560 vs. TAIR10
Match: AT1G01750.1 (AT1G01750.1 actin depolymerizing factor 11)

HSP 1 Score: 226.9 bits (577), Expect = 7.7e-60
Identity = 111/137 (81.02%), Postives = 122/137 (89.05%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN+ASGM V DECKLKFLELKAKRNYRFI FKI+E  Q+V+IDKLG P+ TYEDFT S+
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+D+DF T ENCQKSKIFFIAWSPD S+VRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh15G011560 vs. TAIR10
Match: AT5G52360.1 (AT5G52360.1 actin depolymerizing factor 10)

HSP 1 Score: 223.4 bits (568), Expect = 8.5e-59
Identity = 109/136 (80.15%), Postives = 119/136 (87.50%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAV DECKLKFLELKAKRNYRFI F+I+ Q+VV++KLG P   Y+DFT  LP 
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAV+DFDF T EN QKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKSRA 137
           ATDPSEMS DI+KSRA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]

BLAST of CmoCh15G011560 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 219.5 bits (558), Expect = 1.2e-57
Identity = 105/137 (76.64%), Postives = 121/137 (88.32%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN+ASGM V DECK+KFLELKAKR YRFI FKI+E  Q+V I+KLG P+ TY+DFT S+
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+DFDF T++NCQKSKIFFIAWSPD S+VRSKM+YASSKDRFKRE++GIQ E
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSFDIVKSR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmoCh15G011560 vs. TAIR10
Match: AT5G59890.1 (AT5G59890.1 actin depolymerizing factor 4)

HSP 1 Score: 219.5 bits (558), Expect = 1.2e-57
Identity = 103/137 (75.18%), Postives = 123/137 (89.78%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MANAASGMAV D+CKL+FLELKAKR +RFI +KIEE  ++V+++K+G+P  TYEDF  SL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           PADECRYA++DFDF+T ENCQKSKIFFIAW PD++KVRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSR 136
           LQATDP+EM  D++KSR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of CmoCh15G011560 vs. NCBI nr
Match: gi|659073369|ref|XP_008437023.1| (PREDICTED: actin-depolymerizing factor 7 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 2.5e-68
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELKAKRNYRFI FKIE+QEVV++KLG+PD TYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDIVK+RAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of CmoCh15G011560 vs. NCBI nr
Match: gi|778700193|ref|XP_004152385.2| (PREDICTED: actin-depolymerizing factor 7 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 3.3e-68
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELKAKRNYRFI FKIE+QEVV++KLG+PD TYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDIVK+RAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]

BLAST of CmoCh15G011560 vs. NCBI nr
Match: gi|659077480|ref|XP_008439227.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 2.7e-62
Identity = 118/136 (86.76%), Postives = 128/136 (94.12%), Query Frame = 1


Query: 2   ANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPAD 61
           ANAASGMAVRDECKLKFLELKAKRNYRFI FKIE QEVV++KLG P+ TY+DFT ++PA+
Sbjct: 251 ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPAN 310

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121
           ECRYAVFDFDF TDENCQKSKIFFIAWSPD SKVR+KMVYASSKDRFKRELDGIQ ELQA
Sbjct: 311 ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 370

Query: 122 TDPSEMSFDIVKSRAF 138
           TDPSEMSFDI+K+RAF
Sbjct: 371 TDPSEMSFDIIKARAF 386

[Close]

BLAST of CmoCh15G011560 vs. NCBI nr
Match: gi|823176605|ref|XP_012486503.1| (PREDICTED: actin-depolymerizing factor 7 [Gossypium raimondii])

HSP 1 Score: 245.4 bits (625), Expect = 6.0e-62
Identity = 118/136 (86.76%), Postives = 127/136 (93.38%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAV DECKLKFLELKAKRNYRFI FKI+EQ+VV++K+G P  TYEDFT +LPA
Sbjct: 1   MANAASGMAVDDECKLKFLELKAKRNYRFIVFKIQEQQVVVEKVGSPQETYEDFTAALPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDF TDENCQKSKIFFIAWSPD S+VRSKMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  DECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRSKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKSRA 137
           ATDPSEMSFDI+K+RA
Sbjct: 121 ATDPSEMSFDIIKARA 136

[Close]

BLAST of CmoCh15G011560 vs. NCBI nr
Match: gi|700202243|gb|KGN57376.1| (hypothetical protein Csa_3G182120 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 7.8e-62
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELK KRNYRFI FKIE QEVV++KLG P+ TY+DF+ ++PA
Sbjct: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDF TDENCQKSKIFFIAWSPD SKVR+KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDI+K+RAF
Sbjct: 121 ATDPSEMSFDIIKARAF 137

The following BLAST results are available for this feature:

BLAST of CmoCh15G011560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ADF7_ARATH	1.8e-63	86.03	Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1	[more]
ADF6_ORYSJ	7.3e-60	81.16	Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2	[more]
ADF1_ORYSJ	3.6e-59	80.43	Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1	[more]
ADF10_ARATH	1.4e-58	81.02	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1	[more]
ADF_LILLO	3.1e-58	76.98	Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1	[more]

BLAST of CmoCh15G011560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKY8_CUCSA	2.3e-68	94.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165880 PE=3 SV=1	[more]
A0A0A0LBE8_CUCSA	5.4e-62	85.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182120 PE=3 SV=1	[more]
A0A103YJ79_CYNCS	7.1e-62	86.67	Actin-binding, cofilin/tropomyosin type OS=Cynara cardunculus var. scolymus GN=C...	[more]
A0A103YDM7_CYNCS	9.2e-62	86.76	Actin-binding, cofilin/tropomyosin type OS=Cynara cardunculus var. scolymus GN=C...	[more]
A0A0D2SPX7_GOSRA	1.6e-61	86.67	Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G198000 PE=...	[more]

BLAST of CmoCh15G011560 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25590.1	1.0e-64	86.03	actin depolymerizing factor 7	[more]
AT1G01750.1	7.7e-60	81.02	actin depolymerizing factor 11	[more]
AT5G52360.1	8.5e-59	80.15	actin depolymerizing factor 10	[more]
AT4G00680.1	1.2e-57	76.64	actin depolymerizing factor 8	[more]
AT5G59890.1	1.2e-57	75.18	actin depolymerizing factor 4	[more]

BLAST of CmoCh15G011560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073369\|ref\|XP_008437023.1\|	2.5e-68	94.89	PREDICTED: actin-depolymerizing factor 7 [Cucumis melo]	[more]
gi\|778700193\|ref\|XP_004152385.2\|	3.3e-68	94.89	PREDICTED: actin-depolymerizing factor 7 [Cucumis sativus]	[more]
gi\|659077480\|ref\|XP_008439227.1\|	2.7e-62	86.76	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis me...	[more]
gi\|823176605\|ref\|XP_012486503.1\|	6.0e-62	86.76	PREDICTED: actin-depolymerizing factor 7 [Gossypium raimondii]	[more]
gi\|700202243\|gb\|KGN57376.1\|	7.8e-62	85.40	hypothetical protein Csa_3G182120 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002108	ADF-H
IPR017904	ADF/Cofilin

Vocabulary: **Molecular Function**
Term	Definition
GO:0003779	actin binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0015629	actin cytoskeleton

Vocabulary: **Biological Process**
Term	Definition
GO:0030042	actin filament depolymerization

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
biological_process	GO:0008150	biological_process
cellular_component	GO:0005884	actin filament
cellular_component	GO:0005622	intracellular
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G011560.1	CmoCh15G011560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..134 score: 1.3
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..137 score: 2.9
IPR002108	Actin-depolymerising factor homology domain	PROFILE	PS51263	ADF_H	coord: 5..137 score: 35
IPR017904	ADF/Cofilin/Destrin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..136 score: 2.2E
None	No IPR available	PANTHER	PTHR11913:SF30	ACTIN-DEPOLYMERIZING FACTOR 10-RELATED	coord: 1..136 score: 2.2E
None	No IPR available	unknown	SSF55753	Actin depolymerizing proteins	coord: 2..135 score: 4.46

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G011560	Cucsa.129600	Cucumber (Gy14) v1	cgycmoB0343
CmoCh15G011560	CmaCh18G012480	Cucurbita maxima (Rimu)	cmacmoB403
CmoCh15G011560	CmaCh02G010680	Cucurbita maxima (Rimu)	cmacmoB584
CmoCh15G011560	CmaCh15G010980	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G011560	Cla003643	Watermelon (97103) v1	cmowmB265
CmoCh15G011560	Cla006177	Watermelon (97103) v1	cmowmB260
CmoCh15G011560	Csa5G165880	Cucumber (Chinese Long) v2	cmocuB286
CmoCh15G011560	MELO3C005499	Melon (DHL92) v3.5.1	cmomeB238
CmoCh15G011560	ClCG01G004410	Watermelon (Charleston Gray)	cmowcgB247
CmoCh15G011560	ClCG05G008060	Watermelon (Charleston Gray)	cmowcgB256
CmoCh15G011560	CSPI05G07190	Wild cucumber (PI 183967)	cmocpiB295
CmoCh15G011560	Lsi09G004640	Bottle gourd (USVL1VR-Ls)	cmolsiB255
CmoCh15G011560	Cp4.1LG09g00850	Cucurbita pepo (Zucchini)	cmocpeB264
CmoCh15G011560	Cp4.1LG13g02480	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G011560	Cp4.1LG14g06100	Cucurbita pepo (Zucchini)	cmocpeB270
CmoCh15G011560	Cp4.1LG05g06430	Cucurbita pepo (Zucchini)	cmocpeB293
CmoCh15G011560	MELO3C005499.2	Melon (DHL92) v3.6.1	cmomedB270
CmoCh15G011560	CsaV3_5G004630	Cucumber (Chinese Long) v3	cmocucB0347
CmoCh15G011560	Bhi12G000460	Wax gourd	cmowgoB0363
CmoCh15G011560	Carg23185	Silver-seed gourd	carcmoB0735
CmoCh15G011560	Carg08410	Silver-seed gourd	carcmoB0964
CmoCh15G011560	Carg15135	Silver-seed gourd	carcmoB1325

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G011560	CmoCh16G001310	Cucurbita moschata (Rifu)	cmocmoB236
CmoCh15G011560	CmoCh18G012710	Cucurbita moschata (Rifu)	cmocmoB243
CmoCh15G011560	CmoCh02G010860	Cucurbita moschata (Rifu)	cmocmoB251

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G011560	Watermelon (97103) v2	cmowmbB270
CmoCh15G011560	Cucumber (Gy14) v2	cgybcmoB583
CmoCh15G011560	Melon (DHL92) v3.6.1	cmomedB283