CmaCh18G012480 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G012480
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Actin-depolymerizing factor 12
Location	Cma_Chr18 : 9739710 .. 9745355 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATTTGTTGTTTATACGATGAATTCTTCAGGTATGCAAGATTTAACTCATCAGAGTCATCAATTTTTTTAATAAATTTATTAGATACAAATTTAAAAAATTTATTTAGAGAAATTTTAAATATTAAGTTTGAAAAATATACCTATTAAATTATAATTTAATTTTATATTCAATAATTTAGTAGATTTTAAAAATTGTGTTTAATGTATCATCCACCCATTCAATATTTTTTTTACAGAAAATTTTATTAACTTAATAAAAAATACAAAATTTAGTATTTTAATAGATAGATTATCTTTTAAAATTCTAAAATATATCACAAATTTGTTTGCATAAAGGAAGTTAAAAGATTTATTTAAGAATATCTTTTAAAGTTTAGAAATTTATATTTTATTATTTATTTTTTAAAATTAATGAAGTTTATTTAGAGATTAAATTTGTAAGAGGGCAAGAACCTGACCGGCTCCGGGTCGGATCTGACACAGCCCATCTGTCCGGTTACTAAGATGGGTAATGGGCTTAGCCCAAATATTCCTTGTACGAGGGTTGAGCCCAATGGGCTTACGTCAGCCGGCCCATATTATATTTTACTCATTTACTTTTTGTTTTTTAATTTCCATCTTTACTAATTTAAATTGTCGTACATAGCCTCCAAGTTATTGTTTCCGAACAAAATTTGGGAAACTTTTCTTCTAAAATTTATAATAAATAATATTAAATTATATAAACATAATAATAATGAATAATTAGTAGTAAACAATTACATATAAATTTTTATATAAACATAATAATGAAGCATTCATATGTCGTACATCATAGATCAAAACTAACCGATTACAGAACATCGTCGAAACAGAGTAGGACATCGAATGTTGTAGTGGACTCAACAAAAAAATCCTCTGATTCTCCTATGATTGTCAACCCGACACTCACAAGCTCCAAGATTTGCTCCGATGCTAGTTGCTTCAGAATTCGCTTTCATGTCGACTCCTCCCGCTAGTGGTGGTGTCGATTTCTCCAATATTCACTTTGATGTTAATTATTGTCGTAGGATTTATAAATATATGAATTTAAAATATAAATTTAAGGATTAAATGTTAAACTTAGGGGTTCTATCTAAAATTGAAATCCATGAGAGTAGGACTTGTTATGGGGCATTGATTTATAAAGAAGCCCAATTAGAATGAGAAAAGATATCGACATGTAGTTAAACCCATTCGCATAAACCTCGCCGTCAGATTCGTTGAAAGAACCTCTTCGGGAATTCGCCGGAGCCGATAAACTTCCAATTATCAGGTGAAGATGGTGAGCCGGAGGCAAAAGCTTGCCCGGAAAAAGTACAGAGAAGAACACCCAGAATTGTTCCCGAAAGCAGAACCAACGCCACCAAAAGATCCGGAGAAGAAGAAGAAGAAGAGTGAATTCAAGCGCAAAAAGGGAGAATCGGATTCAAGGAACGACCCGAATAAACCACACAAAAAGGGATTTAAGAAACACCCTCTCAGAGTTCCTGGGATGAAGCCTGGTGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATCGCTAAGTTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGGTTTTTATTTCTTGTTTTACCTTTCTTGTTTATGGTGTTTCACTGTTCACTGAGATTATGGAAATTTTGCTCATAGACATGGTATTGTTAGGAATGTGGTGTTTATGAAATTGGTTGGGATTCAGTTTGCCTCTTCAATTTGGGGCAAACTTCTTAACTCGTTGATGCCAATGCTTAGGTTTCTCCATCAATTAAGATCACTTGCAATAGGTTGTTAGAGGTCTTGAGATCAAGAATAACATAGATTATTTAGAAGAGCTCTATTGTGAGATCCCACATCGGTTGGAGAGGAGAATGAAGCATTCCTTGTAAGGGTGTGGAAACCTCTCCCTAGGAGACGCGTTTTAAAAACCGTGAGGCTGACAATGATACGCAATGAGCCAAAGCAGACAATATCTACTAGCGGTGGGGTTGGGCTGTTACAAATGGTATTAGAGTCGGACACTAGGCGGAGTGCCAACGAGAATGCTGATCTCCCAAGGAGGATGGATTGTGAGATCCCACATCGGTTGAAGAGGGAAATGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGGAGACGTGTCTTAAAAACCGTGAGGCTGATGGGGATATGCAATGAGCCAAAGCGAACAATATCTGTTAGTGGTAGGTTTGAGCTGTTACAAATGGTATCAGAGAGCCAGACACCGGGCGGTGTGCCAGCGAGAACCCTAATCCCTCAAGGGAGAAGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAACTATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAAACCTTGAGGAGAAGGGAAAGGCCACAAAAGATAATATCTGTTAGCGATGGAGTTGAGCTGTTACATCTATAGTTGACGTTTATACCAAATTGTTTTAGTAACAGTGTCATATCTGTTATTTGGCATTCACAGATATGCTTACTTTGCCGGAGACGAGGCCACAGCCTCAAGAACTGCCCCGACAAAACTGAAGACACAGTGGATAAGAAGTTATGCTATAATTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCTCTTCAACATGGTAAATTTTGTTTCAATTCATACTCAAATTCATCTGTGCTTTGCATAATATGTAGAACAATTCCTTTTGGGTTTTTTCTTTTCCTTAACTCTTTCTACTGTTTTCCATCTTGGATCTGTAGGGGGAACTAAATATGCCAATTGCTTTATTTGTAATGAAAGTGGACACTTAAGCAAGAACTGCCCAAAGAATACTCATGGGATCTACCCTAAGGTATTTGGTTTAACTTCCACATTATGGTCATGGGCCAGGCTCTTGGCTTCGCCTGTACGTTGTCCTGTAGTTTCCTGTATCGTATAGCTCGAATAATTTCATTGTATGATATTCTGCAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGACTGTCCAAAAAAAGGCACCCAAGTTTATGCTGGGCCTGGTGTATCTAGTAACAGATGTAAGTCTTCCTGTTTGCTGCTGTGACATGTTTGTTGACACAAATGATCTAAAATTATAATGTTCGGGAACCGAGTTCTTCATATCGGTAAACTTGTGCTTAAGATGCTTAGGATCTCCAGATTTGTGCTAAAACTTTGTATTGTGAGTAGTAATTCATTTTCTTTTGTCTCAGCATCTGGATATGTGGAAATGTCGAGACGACCAGAAACGAGGCTCGTCAGTGGTGACGACCTCGAGGATGACTTCATGGTCGAGGAAGATAATTTACAGATCAAAGATGCGAAACTCGGAAATAAAAAGGGTCCCAAAGTTGTGAAATTCATGGATTGATAGGTCTATGGGGAAGATTAAACCTCATGTGTGTTGTAAAACCTTTTCTTTTAGACGCAGAGAATATAGGTAGTCCCCTAAATGTATTTTTGTCTCTTAAATATTATCATGATTTAAGAGTTGTACAATGTTCAAGCTTTACCAGCTGATGCATTAGAGATATTGTCCCTGAAAGGGCTGGCCTCATTTGATAGCATTACTTTTATTTAATTAGCTATATCGAATATTCTATTCTTTAAAAAATTGTAATATTATCTTTTGATTTTTCGTAATCATTCAAAATTATTATTAGAATAGAAATCAATTACAATGACTTGAAACAATGAAATGGTGACTAGACGCTCACTTAAATTAAGTTTGAAAGAACGACATTCAAATGTGTTATTTTTTTGTCAAACATTCTAGAATTACACTCAGAAAACAACATTACATCATTAGTGTCATTGTGGGATATGTCTCCGCTCAAGCCCATCTAGTAGATATTGTCTAATTTAGCTTGTTACGTATCGTTGTGAGCTTCATAGTTTTAAAATGCGTTAACTTGGGAGAGGTTTTCAAACCCTTATAAGAAATGCTTAGTTAGTTTCCCTCCCCAACCAATGTGAGATCTCACAATCCATCTCCACTGGGAGCCCAGTGTCCTCACTACCACATTGCCATAAGCGGCGTCTGGCTCTATACTATCATCAACCTTGGGAGCCCAGTGTCCTCACTACCATATTGCCATCAGCGAGCATCTGGCTCTGATACTATCATCAACCAGTATCTGACTCTGATACTATTTGTAACAGCTTAAACCTACCACTAGTAAATATTGATACTATTTGTAATAGCTCAAACCCACCACTAGTAAATATTGATATTATTTGTAATAGCTCAAACCCACTCCTAGTATCTATTGTTTACTTTAGTCAGAGTTCTTTCATTAAACTAAACTAAACAACCTCAGACTAAAAACATGAAACATAGATCATAGATTTCATGAAACATGAAATTGTTTCATTTCTTAAAAAAGAAAGTCTTTTTTTGGGGAAAAGTGTTGATAGGACAGGAAGGAAGAATGTTGTTGTGTTTTAGCATGAAAGGTGGCATAGAAAAATGTGGAGAACACAATATTAGGCATTCAAAACAATTCTCAACCTTAGTTTTGTCCCTCAAATTACTCCTCTTTTCCTCTTTAATCTCATCTCATCTCATCTCTCCCCCCAAAATAAGGATCTCTCCCTCTCCCTCTTCATCTCTAACATTTCTCTTCTCTTCTCTCTTTCTTTCACTCTTCTCCTCCATTCCCCTCTCTCACACATTCATACACAATATGGTATGCTCCTTCGTTTATTTTCATCATCGTTGTTTGTCATTGTGTTGTAGTTATTTTTGTTAGTTTAGATGAACCATGAAAGGTGAAAATATGGACTAATGCGTGTTATATTATGGGGTGAATTAGGCGAACGCGGCATCTGGAATGGTTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTAAAAACAAAGAGGAACTATCGTTTCATTATATTTAAGATCGAGAATCAAGAAGTTGTTGTGGAGAAACTTGGAAGCCCTACAGAAACCTATGACGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCACCGACGAGAACTGCCAGAAAAGCAAGATCTTCTTCATAGCATGGTGACGTTAACCTTGTCTTCACACCTTCACATTGGTTTCACAAAAAATCTCTTATGTCTCTATCAAACCTTAAACTAAGCTTGTCTGCTTGTCCAAATCTGTGTGTTTCTCTGTTTTGAAGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGGATTCAGGTGGAATTGCAAGCCACTGATGCAAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCCTTTTAAGCTCACTTTTCATCTCCATTCTTGATCCTGCTTAATGTTGTGATACTATACGACTCATTCACTTTCTTTTCCACTTTTTTTGTCCTTTTTTTTGTACGTTTTGATCTTTTTTCACAGCCTTGTTTTTGCTTTATGGTGTTTCCACTCATATCTAAAGCTGTATCGACGATCTGTTGTAGTTCTATATCAACATTCCTTCTTTCACTTAATCTTTCAC

mRNA sequence

AGAATTTGTTGTTTATACGATGAATTCTTCAGAGTAGGACATCGAATGTTGTAGTGGACTCAACAAAAAAATCCTCTGATTCTCCTATGATTGTCAACCCGACACTCACAAGCTCCAAGATTTGCTCCGATGCTAGTTGCTTCAGAATTCGCTTTCATGTCGACTCCTCCCGCTAGTGGTGGTGTCGATTTCTCCAATATTCACTTTGATGTTAATTATTGTCGTAGGATTTATAAATATATGAATTTAAAATATAAATTTAAGGATTAAATGTTAAACTTAGGGGTTCTATCTAAAATTGAAATCCATGAGAGTAGGACTTGTTATGGGGCATTGATTTATAAAGAAGCCCAATTAGAATGAGAAAAGATATCGACATGTAGTTAAACCCATTCGCATAAACCTCGCCGTCAGATTCGTTGAAAGAACCTCTTCGGGAATTCGCCGGAGCCGATAAACTTCCAATTATCAGGTGAAGATGGTGAGCCGGAGGCAAAAGCTTGCCCGGAAAAAGTACAGAGAAGAACACCCAGAATTGTTCCCGAAAGCAGAACCAACGCCACCAAAAGATCCGGAGAAGAAGAAGAAGAAGAGTGAATTCAAGCGCAAAAAGGGAGAATCGGATTCAAGGAACGACCCGAATAAACCACACAAAAAGGGATTTAAGAAACACCCTCTCAGAGTTCCTGGGATGAAGCCTGGTGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATCGCTAAGTTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTACTTTGCCGGAGACGAGGCCACAGCCTCAAGAACTGCCCCGACAAAACTGAAGACACAGTGGATAAGAAGTTATGCTATAATTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCTCTTCAACATGGGGGAACTAAATATGCCAATTGCTTTATTTGTAATGAAAGTGGACACTTAAGCAAGAACTGCCCAAAGAATACTCATGGGATCTACCCTAAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGACTGTCCAAAAAAAGGCACCCAAGTTTATGCTGGGCCTGCATCTGGATATGTGGAAATGTCGAGACGACCAGAAACGAGGCTCGTCAGTGGTGACGACCTCGAGGATGACTTCATGGTCGAGGAAGATAATTTACAGATCAAAGATGCGAAACTCGGAAATAAAAAGGGTCCCAAAGTTGCGAACGCGGCATCTGGAATGGTTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTAAAAACAAAGAGGAACTATCGTTTCATTATATTTAAGATCGAGAATCAAGAAGTTGTTGTGGAGAAACTTGGAAGCCCTACAGAAACCTATGACGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCACCGACGAGAACTGCCAGAAAAGCAAGATCTTCTTCATAGCATGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGGATTCAGGTGGAATTGCAAGCCACTGATGCAAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCCTTTTAAGCTCACTTTTCATCTCCATTCTTGATCCTGCTTAATGTTGTGATACTATACGACTCATTCACTTTCTTTTCCACTTTTTTTGTCCTTTTTTTTGTACGTTTTGATCTTTTTTCACAGCCTTGTTTTTGCTTTATGGTGTTTCCACTCATATCTAAAGCTGTATCGACGATCTGTTGTAGTTCTATATCAACATTCCTTCTTTCACTTAATCTTTCAC

Coding sequence (CDS)

ATGGTGAGCCGGAGGCAAAAGCTTGCCCGGAAAAAGTACAGAGAAGAACACCCAGAATTGTTCCCGAAAGCAGAACCAACGCCACCAAAAGATCCGGAGAAGAAGAAGAAGAAGAGTGAATTCAAGCGCAAAAAGGGAGAATCGGATTCAAGGAACGACCCGAATAAACCACACAAAAAGGGATTTAAGAAACACCCTCTCAGAGTTCCTGGGATGAAGCCTGGTGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATCGCTAAGTTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTACTTTGCCGGAGACGAGGCCACAGCCTCAAGAACTGCCCCGACAAAACTGAAGACACAGTGGATAAGAAGTTATGCTATAATTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCTCTTCAACATGGGGGAACTAAATATGCCAATTGCTTTATTTGTAATGAAAGTGGACACTTAAGCAAGAACTGCCCAAAGAATACTCATGGGATCTACCCTAAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGACTGTCCAAAAAAAGGCACCCAAGTTTATGCTGGGCCTGCATCTGGATATGTGGAAATGTCGAGACGACCAGAAACGAGGCTCGTCAGTGGTGACGACCTCGAGGATGACTTCATGGTCGAGGAAGATAATTTACAGATCAAAGATGCGAAACTCGGAAATAAAAAGGGTCCCAAAGTTGCGAACGCGGCATCTGGAATGGTTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTAAAAACAAAGAGGAACTATCGTTTCATTATATTTAAGATCGAGAATCAAGAAGTTGTTGTGGAGAAACTTGGAAGCCCTACAGAAACCTATGACGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCACCGACGAGAACTGCCAGAAAAGCAAGATCTTCTTCATAGCATGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGGATTCAGGTGGAATTGCAAGCCACTGATGCAAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCCTTTTAA

Protein sequence

MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKSEFKRKKGESDSRNDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPASGYVEMSRRPETRLVSGDDLEDDFMVEEDNLQIKDAKLGNKKGPKVANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

Homology

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BLAST of CmaCh18G012480 vs. Swiss-Prot
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 4.5e-62
Identity = 117/136 (86.03%), Postives = 127/136 (93.38%), Query Frame = 1


Query: 254 VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 313
           +ANAASGM V DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P ETYDDFTA++P 
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 314 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 373
           NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 374 ATDASEMSFDIIKARA 390
           ATD SEMSFDIIK+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of CmaCh18G012480 vs. Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 3.5e-59
Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 1


Query: 254 VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 313
           +ANAASGM V DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP E YDDFT  +PP
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 314 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 373
           NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 374 ATDASEMSFDIIKARA 390
           ATD SEMS DIIK+RA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]

BLAST of CmaCh18G012480 vs. Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-58
Identity = 110/139 (79.14%), Postives = 124/139 (89.21%), Query Frame = 1


Query: 254 VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 313
           +AN++SGM V DECKLKF+ELK KRN+RFI+FKIE   Q+V VE+LG P E+YDDFT  +
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 314 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 373
           PPNECRYAVFDFDF TDENCQKSKIFFI+WSPDTS VR+KM+YAS+KDRFKRELDGIQVE
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 374 LQATDASEMSFDIIKARAF 391
           LQATD SEMS DIIKARAF
Sbjct: 121 LQATDPSEMSMDIIKARAF 139

[Close]

BLAST of CmaCh18G012480 vs. Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.7e-56
Identity = 107/137 (78.10%), Postives = 123/137 (89.78%), Query Frame = 1


Query: 254 VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 313
           +AN+ASGM V DECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG+P ETY+DFT +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 314 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 373
           P +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 374 LQATDASEMSFDIIKAR 389
           LQATD SEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmaCh18G012480 vs. Swiss-Prot
Match: ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 8.1e-56
Identity = 107/138 (77.54%), Postives = 124/138 (89.86%), Query Frame = 1


Query: 254 VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 313
           +AN+ASGM V DECKLKF ELK+KR++RFI FKI+   Q+VVV++LG P +TYDDFTA++
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 314 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 373
           P +ECRYAVFDFDF TDENCQKSKIFFI+WSPDTS VR+KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 374 LQATDASEMSFDIIKARA 390
           LQATD SEMS DI+KARA
Sbjct: 121 LQATDPSEMSMDIVKARA 138

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BLAST of CmaCh18G012480 vs. TrEMBL
Match: A0A164WX91_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020244 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 1.5e-152
Identity = 275/408 (67.40%), Postives = 325/408 (79.66%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKK-KSEFKRKKGESDSRNDPNKPHK 60
           MVS+RQ++ARKK++E +P+ FPK EPTP K+P+KKKK K +FK+KK +S   +DPNK  K
Sbjct: 1   MVSQRQRIARKKFKEANPDKFPKQEPTPAKNPDKKKKNKPQFKKKKADS---SDPNKGTK 60

Query: 61  K--GFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           +    KKHPLRVPGM+PGESC+ICK  DHIAK CPEKAQWEKNKICL CR+RGHSLKNCP
Sbjct: 61  RISSHKKHPLRVPGMRPGESCYICKEVDHIAKHCPEKAQWEKNKICLSCRQRGHSLKNCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIY 180
           +K E TVDKKLCYNCGE+ HSLA CPQP + GGTK+ANCFIC+E GHLSKNCPKNTHGIY
Sbjct: 121 NKNEHTVDKKLCYNCGESSHSLAECPQPREEGGTKFANCFICSERGHLSKNCPKNTHGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPASGYVEMSRRPE-------TRLVSGDDLED 240
           PKGGCCK C  VTHLA+DCP KGT+      +G+ ++S R E       T+L SGDDL+D
Sbjct: 181 PKGGCCKICSGVTHLARDCPNKGTR-----NTGFGKISARFEDRPTGQVTKLTSGDDLDD 240

Query: 241 DFMVE-------EDNLQIKDAKLGNKKGPK--VANAASGMVVRDECKLKFLELKTKRNYR 300
           DF VE       E+    K   +G    PK  ++NAASGM V DECKLKFLELK KRN+R
Sbjct: 241 DFTVEDAHIVDAEEPANEKVPPVGRSPTPKDTMSNAASGMSVHDECKLKFLELKAKRNFR 300

Query: 301 FIIFKIENQEVVVEKLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAW 360
           +II+KI++Q+VVV+KLG P ETYDDFT ++P +ECRYA++DFDFTT ENCQKSKIFF+AW
Sbjct: 301 YIIYKIDDQQVVVDKLGGPDETYDDFTNSLPADECRYAIYDFDFTTSENCQKSKIFFVAW 360

Query: 361 SPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDASEMSFDIIKARA 390
           SPDTS VR KMVYASSKDRFKRELDGI  ELQATD SEMS D++K+RA
Sbjct: 361 SPDTSRVRMKMVYASSKDRFKRELDGIGAELQATDPSEMSLDVVKSRA 400

[Close]

BLAST of CmaCh18G012480 vs. TrEMBL
Match: I6XNH4_LINUS (Putative actin-depolymerizing factor 12 OS=Linum usitatissimum PE=4 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 4.0e-150
Identity = 272/397 (68.51%), Postives = 313/397 (78.84%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDP---EKKKKKSEFKRKKGESDSRNDPNKP 60
           MVS+RQKLARKK++ E+P LFPK EPT PKDP   +K KKKS FKRKK ES      N P
Sbjct: 1   MVSQRQKLARKKFKAENPALFPKPEPTAPKDPNKPKKNKKKSTFKRKKPES------NDP 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
            K  F K PLRVPGMKPG+SC+ICKA DHIAK CP+KA+WE++KICLLCR+RGHSLK CP
Sbjct: 61  RKTKFTKRPLRVPGMKPGDSCYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCP 120

Query: 121 DKTE--DTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHG 180
           +K +  ++V  KLCYNCGETGHSLANC QP+Q GGTKYA+CF+CNE GHLSK+CPKN +G
Sbjct: 121 NKRDGDESVGAKLCYNCGETGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANG 180

Query: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQV---YAGPASGYVEMSRRPETRLVSGDDLEDDF 240
           IYPKGG CK CG VTHLA+DCP K  +    Y   A G  E S    T+ +SGD+L DDF
Sbjct: 181 IYPKGGSCKICGGVTHLARDCPDKAKRFPTSYDRKAFGIGEKSTGKVTKFISGDELVDDF 240

Query: 241 MVEEDNLQIKDAKLGNKKGPKVANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEV 300
           M + +    +  K  + K    AN+ASGM V D+CKLKFLELK KRNYRFI+FKI NQ+V
Sbjct: 241 MADIE----QTGKPSDLKEVATANSASGMAVHDDCKLKFLELKAKRNYRFIVFKIMNQQV 300

Query: 301 VVEKLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKM 360
            VEKLGSP ETY+DFT+++PPNECRYAV+DFDFTTDENCQKSKIFFIAW+PD S VR KM
Sbjct: 301 SVEKLGSPEETYEDFTSSLPPNECRYAVYDFDFTTDENCQKSKIFFIAWAPDISKVREKM 360

Query: 361 VYASSKDRFKRELDGIQVELQATDASEMSFDIIKARA 390
           VYASSKDRFKRELDGIQVELQATD SEMS DI+K RA
Sbjct: 361 VYASSKDRFKRELDGIQVELQATDPSEMSLDIVKGRA 387

[Close]

BLAST of CmaCh18G012480 vs. TrEMBL
Match: A0A0D3B3U0_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 4.1e-147
Identity = 272/414 (65.70%), Postives = 315/414 (76.09%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDP-EKKKKKSEFKRKKGESDSRNDPNKPHK 60
           MVS+RQ+LARK+Y+E HPE FPK EPTPPKDP +KKKKKS FK+KK  S S        +
Sbjct: 1   MVSQRQRLARKRYKEAHPEEFPKPEPTPPKDPNKKKKKKSLFKKKKPTSSS-------DR 60

Query: 61  KGFK--KHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           KG    +HPLRVPGMKPGE C+ICK+K HIAK CPEK++WE+NKICL CRRRGHSLKNCP
Sbjct: 61  KGSSSTRHPLRVPGMKPGEGCYICKSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCP 120

Query: 121 DKT-EDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGI 180
           DK+ E + +KKLCYNCG+TGHSL++CP PL  GGTK+A+CFIC   GH+SKNCP+N HG+
Sbjct: 121 DKSDESSFEKKLCYNCGDTGHSLSHCPNPLVDGGTKFASCFICKGQGHISKNCPQNKHGV 180

Query: 181 YPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPASGYVEMSRRPETRLVSGDDLEDDFMVEE 240
           YP GGCCK CG V HL KDCP K  +  A       + + R +    SGDDLEDDF  E 
Sbjct: 181 YPMGGCCKVCGSVAHLVKDCPDKLDRDSAPTKRSRFDATPRGKLTKFSGDDLEDDFYEEP 240

Query: 241 DN---LQIKDAKLGN----------KKGPKV--------ANAASGMVVRDECKLKFLELK 300
            +   L+  DA   +          K+GPKV        AN+ASGM V DECKLKFLELK
Sbjct: 241 KSSKKLKTSDATTPDDLDQKSIPEKKQGPKVNLHQPNAMANSASGMAVEDECKLKFLELK 300

Query: 301 TKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSK 360
            KRNYRFIIF+I+ Q+VVVEKLGSP E YDDF+ ++P NECRYAV+DFDFTT+ENCQKSK
Sbjct: 301 AKRNYRFIIFRIDGQQVVVEKLGSPEENYDDFSNSLPANECRYAVYDFDFTTNENCQKSK 360

Query: 361 IFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDASEMSFDIIKARA 390
           IFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQATD SEMSFDIIK+RA
Sbjct: 361 IFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 407

[Close]

BLAST of CmaCh18G012480 vs. TrEMBL
Match: A0A078HMT2_BRANA (BnaA03g12630D protein OS=Brassica napus GN=BnaA03g12630D PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 2.0e-146
Identity = 270/412 (65.53%), Postives = 312/412 (75.73%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDP-EKKKKKSEFKRKKGESDSRNDPNKPHK 60
           MVS+RQ+LARK+Y+E HPE FPK EPTPPKDP +KKKKKS FK+KK  S S +       
Sbjct: 1   MVSQRQRLARKRYKEAHPEEFPKPEPTPPKDPNKKKKKKSLFKKKKPTSSSGSSST---- 60

Query: 61  KGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDK 120
               +HPLRVPGMKPGE C+ICK+K HIAK CPEK++WEKNKICL CRRRGHSLKNCPDK
Sbjct: 61  ----RHPLRVPGMKPGEGCYICKSKTHIAKLCPEKSEWEKNKICLQCRRRGHSLKNCPDK 120

Query: 121 T-EDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYP 180
           + E + +KKLCYNCG+TGHSL++CP PL  GGTK+A+CFIC   GH+SKNCP+N HG+YP
Sbjct: 121 SDESSFEKKLCYNCGDTGHSLSHCPNPLVDGGTKFASCFICKGQGHISKNCPQNKHGVYP 180

Query: 181 KGGCCKTCGEVTHLAKDCPKKGTQVYAGPASGYVEMSRRPETRLVSGDDLEDDFMVEEDN 240
            GG CK CG V HL KDCP K  +  A       + + R +    SGDDLEDDF  E  +
Sbjct: 181 MGGSCKVCGSVAHLVKDCPDKLDRDSAPTKRSRFDATPRGKLTKFSGDDLEDDFYEEPQS 240

Query: 241 ---LQIKDAKLGN----------KKGPKV--------ANAASGMVVRDECKLKFLELKTK 300
              ++  DA   +          K+GPKV        ANAASGM V DECKLKFLELK K
Sbjct: 241 SKKMKSSDATAPDDLDQKSIPEKKQGPKVNLHQPNAMANAASGMAVEDECKLKFLELKAK 300

Query: 301 RNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIF 360
           RNYRFIIF+I+ Q+VVVEKLGSP E YDDF+ ++P NECRYAV+DFDFTT+ENCQKSKIF
Sbjct: 301 RNYRFIIFRIDGQQVVVEKLGSPEENYDDFSNSLPANECRYAVYDFDFTTNENCQKSKIF 360

Query: 361 FIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDASEMSFDIIKARA 390
           FIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQATD SEMSFDIIK+RA
Sbjct: 361 FIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 404

[Close]

BLAST of CmaCh18G012480 vs. TrEMBL
Match: I6Y9H5_LINUS (Actin-depolymerizing factor 12 OS=Linum usitatissimum GN=ADF12 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 9.4e-144
Identity = 264/394 (67.01%), Postives = 300/394 (76.14%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDP---EKKKKKSEFKRKKGESDSRNDPNKP 60
           MVS+RQKLARKK++ E+P LFPK EPTPPKDP   +K KKKS FKRKK ESD   DP  P
Sbjct: 1   MVSQRQKLARKKFKAENPALFPKPEPTPPKDPNKPKKNKKKSTFKRKKPESD---DPRNP 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
            K  F K PLRVPGMKPG+SC+ICKA DHIAK CP+KA+WE++KICLLCR+RGHSLK CP
Sbjct: 61  KKTKFTKRPLRVPGMKPGDSCYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCP 120

Query: 121 DKTE--DTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHG 180
           +K +  +++  KLCYNCGETGHSLANC QP+Q GGTKYA+CF+CNE GHLSK+CPKN +G
Sbjct: 121 NKRDGDESIGAKLCYNCGETGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANG 180

Query: 181 IYPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPASGYVEMSRRPETRLVSGDDLEDDFMVE 240
           IYPKGG CK CG VTHLA+DCP K  +                             F   
Sbjct: 181 IYPKGGSCKICGGVTHLARDCPDKAKR-----------------------------FTTS 240

Query: 241 EDNLQIKDAKLGNKKGPKVANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVE 300
            D    K   +G K   K AN+ASGM V D+CKLKFLELK KRNYRFI+FKI NQ+V VE
Sbjct: 241 YDR---KAFGIGEKSTGK-ANSASGMAVHDDCKLKFLELKAKRNYRFIVFKILNQQVSVE 300

Query: 301 KLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYA 360
           KLGSP ETY+DFT+++PPNECRYAV+DFDFTTDENCQKSKIFFIAW+PD S VR KMVYA
Sbjct: 301 KLGSPEETYEDFTSSLPPNECRYAVYDFDFTTDENCQKSKIFFIAWAPDISKVREKMVYA 358

Query: 361 SSKDRFKRELDGIQVELQATDASEMSFDIIKARA 390
           SSKDRFKRELDGIQVELQATD SEMS DI+K RA
Sbjct: 361 SSKDRFKRELDGIQVELQATDPSEMSLDIVKGRA 358

[Close]

BLAST of CmaCh18G012480 vs. TAIR10
Match: AT5G52380.1 (AT5G52380.1 VASCULAR-RELATED NAC-DOMAIN 6)

HSP 1 Score: 313.5 bits (802), Expect = 1.8e-85
Identity = 155/269 (57.62%), Postives = 195/269 (72.49%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDP-EKKKKKSEFKRKKGESDSRNDPNKPHK 60
           MV++R++LA+K+Y+E +PELFPKAEPTPPKDP +KKKKKS FK+KK  S +    ++P +
Sbjct: 1   MVNQRRRLAQKRYKEANPELFPKAEPTPPKDPNKKKKKKSLFKKKKPGSST----DRPQR 60

Query: 61  KGFK-KHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPD 120
            G   +HPLRVPGMKPGE CFIC +K HIAK CPEK++WE+NKICL CRRRGHSLKNCP+
Sbjct: 61  TGSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPE 120

Query: 121 KTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYP 180
           K  ++ +KKLCYNCG+TGHSL++CP P++ GGTK+A+CFIC   GH+SKNCP+N HGIYP
Sbjct: 121 KNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYP 180

Query: 181 KGGCCKTCGEVTHLAKDCPKKGTQVYAGP-ASGYVEMSRRPETRLVSGDDLEDDFMVE-- 240
            GGCCK CG V HL KDCP K  Q  A P  +   + + R +    SGDDLEDDF  E  
Sbjct: 181 MGGCCKVCGSVAHLVKDCPDKFNQESAQPKKTSRFDATPRGKLTKFSGDDLEDDFTEEPK 240

Query: 241 --------EDNLQIKDAKLGNKKGPKVAN 257
                   +D+ Q        K+GPK+ N
Sbjct: 241 SSKKINTSDDSAQNSVEVKKKKQGPKIVN 265

[Close]

BLAST of CmaCh18G012480 vs. TAIR10
Match: AT4G25590.1 (AT4G25590.1 actin depolymerizing factor 7)

HSP 1 Score: 240.0 bits (611), Expect = 2.5e-63
Identity = 117/136 (86.03%), Postives = 127/136 (93.38%), Query Frame = 1


Query: 254 VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 313
           +ANAASGM V DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P ETYDDFTA++P 
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 314 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 373
           NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 374 ATDASEMSFDIIKARA 390
           ATD SEMSFDIIK+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of CmaCh18G012480 vs. TAIR10
Match: AT5G52360.1 (AT5G52360.1 actin depolymerizing factor 10)

HSP 1 Score: 230.3 bits (586), Expect = 2.0e-60
Identity = 114/136 (83.82%), Postives = 122/136 (89.71%), Query Frame = 1


Query: 254 VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 313
           +ANAASGM V DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP E YDDFT  +PP
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 314 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 373
           NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 374 ATDASEMSFDIIKARA 390
           ATD SEMS DIIK+RA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]

BLAST of CmaCh18G012480 vs. TAIR10
Match: AT1G01750.1 (AT1G01750.1 actin depolymerizing factor 11)

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-57
Identity = 107/137 (78.10%), Postives = 123/137 (89.78%), Query Frame = 1


Query: 254 VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 313
           +AN+ASGM V DECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG+P ETY+DFT +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 314 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 373
           P +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 374 LQATDASEMSFDIIKAR 389
           LQATD SEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmaCh18G012480 vs. TAIR10
Match: AT4G00680.1 (AT4G00680.1 actin depolymerizing factor 8)

HSP 1 Score: 218.8 bits (556), Expect = 6.0e-57
Identity = 105/137 (76.64%), Postives = 123/137 (89.78%), Query Frame = 1


Query: 254 VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYDDFTAAI 313
           +AN+ASGM V DECK+KFLELK KR YRFI+FKI+   Q+V +EKLG+P ETYDDFT++I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 314 PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 373
           P +ECRYAV+DFDFTT++NCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 374 LQATDASEMSFDIIKAR 389
           LQATD SEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of CmaCh18G012480 vs. NCBI nr
Match: gi|778688554|ref|XP_011652775.1| (PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus])

HSP 1 Score: 711.4 bits (1835), Expect = 8.3e-202
Identity = 354/429 (82.52%), Postives = 372/429 (86.71%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKSEFKRKKGESDSRNDPNKPHKK 60
           MV++RQ+LARKKY+EEHPELFPKAEPTPPKDP+KKKKKS+FKRKK ES+S  DP KPHKK
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPTKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKT 120
           GFKKHPLRVPGMKPGESCFICKA DHIAK CPEKAQWEKNKICLLCRRRGHSLKNCPDK 
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 EDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYPKG 180
           E TVDKKLCYNCGETGHSLANCPQPLQ GGTK+A+CFICNESGHLSKNCPKNTHGIYPKG
Sbjct: 121 EGTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GCCKTCGEVTHLAKDCPKKGTQVY--AGP----ASGYVEMSRRPETRLVSGDDLEDDFMV 240
           GCCKTCGEVTHLAKDCPKKGTQV+  AG     +SGYVEM RRPET+L+SGDDLEDDFM+
Sbjct: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240

Query: 241 EEDNLQIKDAKLGNKKGPKV---------------------------------ANAASGM 300
           +E +LQIKDAK+G KKGPKV                                 ANAASGM
Sbjct: 241 DEGSLQIKDAKMGKKKGPKVVKFMDFSSIILPYPSSLHPSFSPFHTHSSYTKMANAASGM 300

Query: 301 VVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPPNECRYAVF 360
            VRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSP ETYDDF+AAIP NECRYAVF
Sbjct: 301 AVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAVF 360

Query: 361 DFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDASEMS 391
           DFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDRFKRELDGIQVELQATD SEMS
Sbjct: 361 DFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEMS 420

[Close]

BLAST of CmaCh18G012480 vs. NCBI nr
Match: gi|659077480|ref|XP_008439227.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis melo])

HSP 1 Score: 698.0 bits (1800), Expect = 9.6e-198
Identity = 344/390 (88.21%), Postives = 357/390 (91.54%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKSEFKRKKGESDSRNDPNKPHKK 60
           MVS+RQ+LARKKYRE HPELFPKAEPTPPKDP+KKKK S+FKRKKGES+S  DPNKPHKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPDKKKK-SKFKRKKGESNSNRDPNKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKT 120
           GFKKHPLRVPGMKPGESCFICKAKDHIAK CPEKAQWEKNKICLLCRRRGHSLKNCPDK 
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKN 120

Query: 121 EDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYPKG 180
           E T+DKKLCYNCGETGHSLANCPQPLQ GGTK+A+CFICNESGHLSKNCPKNTHGIYPKG
Sbjct: 121 EGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKG 180

Query: 181 GCCKTCGEVTHLAKDCPKKGTQVYAGPASGYVEMSRRPETRLVSGDDLEDDFMVEEDNLQ 240
           GCCKTCGEVTHLAKDCPKKGTQV+   ASGYVEM RRPET+LVSGDDLEDDFM++ED   
Sbjct: 181 GCCKTCGEVTHLAKDCPKKGTQVFDRAASGYVEMPRRPETKLVSGDDLEDDFMIDEDQ-- 240

Query: 241 IKDAKLGNKKGPKVANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSP 300
            K+           ANAASGM VRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSP
Sbjct: 241 -KNKWRDILVVMNXANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSP 300

Query: 301 TETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDR 360
            ETYDDFTAAIP NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDR
Sbjct: 301 EETYDDFTAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDR 360

Query: 361 FKRELDGIQVELQATDASEMSFDIIKARAF 391
           FKRELDGIQVELQATD SEMSFDIIKARAF
Sbjct: 361 FKRELDGIQVELQATDPSEMSFDIIKARAF 386

[Close]

BLAST of CmaCh18G012480 vs. NCBI nr
Match: gi|747060138|ref|XP_011076485.1| (PREDICTED: uncharacterized protein C683.02c [Sesamum indicum])

HSP 1 Score: 568.9 bits (1465), Expect = 6.7e-159
Identity = 284/398 (71.36%), Postives = 327/398 (82.16%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKK-SEFKRKKGESDSRNDPNKPHK 60
           MVS+RQ+LARK+Y+EEHPELFP    TPPK+P KKKKK S+FKRKK +S   +DPNKP K
Sbjct: 1   MVSKRQRLARKRYKEEHPELFP----TPPKEPSKKKKKNSKFKRKKSDS---SDPNKPKK 60

Query: 61  KGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDK 120
             +KKHPLRV GMKPGESC+ICKA DHIAK CP+K++WE+NKICL CR+RGHSLKNCP+K
Sbjct: 61  SSYKKHPLRVAGMKPGESCYICKAPDHIAKNCPKKSEWERNKICLFCRQRGHSLKNCPNK 120

Query: 121 TEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYPK 180
             +++DKKLCYNCGE GHSL+NCPQPLQ GGT+YA+CFIC ESGHLSKNCPKNTHGIYPK
Sbjct: 121 NNESMDKKLCYNCGEMGHSLSNCPQPLQDGGTRYASCFICKESGHLSKNCPKNTHGIYPK 180

Query: 181 GGCCKTCGEVTHLAKDCPKKGTQVYAGPASGYVEMSRRPE--TRLVSGDDLEDDFM-VEE 240
           GGCCK CG VTHLA+DCP K ++     +   VE+  RP    +  SGDDLEDDF+ V  
Sbjct: 181 GGCCKVCGGVTHLARDCPNKRSRT----SDAAVEVQERPNRVIKFASGDDLEDDFISVVP 240

Query: 241 DNLQIKDAKLGNKKGPK----VANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEV 300
            + + KD K   K+GPK    VAN+ASGM V+DECKLKF ELK KRNYRFIIFKI+ Q+V
Sbjct: 241 LDEKDKDVKTNKKQGPKVVNFVANSASGMAVQDECKLKFQELKAKRNYRFIIFKIQEQQV 300

Query: 301 VVEKLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKM 360
           VVEKLG P + Y+DFT A+P +ECRYAVFDFDF T+ENCQKSKIFFIAWSPD+S VR KM
Sbjct: 301 VVEKLGEPGQNYNDFTRALPSDECRYAVFDFDFITNENCQKSKIFFIAWSPDSSSVRMKM 360

Query: 361 VYASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF 391
           VYASSKDRFKRELDGIQVELQATD SEMS DIIK RA+
Sbjct: 361 VYASSKDRFKRELDGIQVELQATDPSEMSLDIIKERAY 387

[Close]

BLAST of CmaCh18G012480 vs. NCBI nr
Match: gi|985466114|ref|XP_006490392.2| (PREDICTED: uncharacterized protein LOC102611732 isoform X2 [Citrus sinensis])

HSP 1 Score: 560.1 bits (1442), Expect = 3.1e-156
Identity = 276/395 (69.87%), Postives = 314/395 (79.49%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKK--SEFKRKKGESDSRNDPNKPH 60
           MVS+RQ+ ARK+++E HPELFPK EPT PKDP +KKKK  S+FKRKK ES   N   K  
Sbjct: 1   MVSKRQREARKRFKEVHPELFPKPEPTAPKDPSEKKKKKSSKFKRKKAESKDPNRNEKSM 60

Query: 61  KKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPD 120
           K+ F +HPLRVPGMKPGESCFICKAK+HIAK CP KA+WEKNKICL+CRRRGH+LKNCP 
Sbjct: 61  KRVFTRHPLRVPGMKPGESCFICKAKEHIAKHCPMKAEWEKNKICLVCRRRGHTLKNCPS 120

Query: 121 KTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYP 180
           K ++T   KLCYNCG+ GHSLA CPQPLQ GGTK+A+CFIC E GHLSKNCP+N HGIYP
Sbjct: 121 KNDETESTKLCYNCGQAGHSLAQCPQPLQDGGTKFASCFICKEQGHLSKNCPQNAHGIYP 180

Query: 181 KGGCCKTCGEVTHLAKDCPKKGTQVYAGPASGYVEMSRRPE---TRLVSGDDLEDDFMVE 240
           KGGCCK CG VTHLA+DCP KG Q +   +   +    RP    T+  SGDDL DDF+ E
Sbjct: 181 KGGCCKICGGVTHLARDCPNKGIQGFTASSKQAMAGGERPTGQVTKFTSGDDLLDDFLTE 240

Query: 241 EDNLQIKDAKLGNKKGPKVANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVE 300
           + N+  KD     K     ANAASGM V D+CKLKF+ELK KRNYRFIIFKI+NQ+VVVE
Sbjct: 241 DANIGNKD-----KSSIAKANAASGMAVHDDCKLKFMELKAKRNYRFIIFKIDNQQVVVE 300

Query: 301 KLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYA 360
           KLGSP ++YDDFT ++P +ECRYAV+DFDF T ENCQKSKIFFIAWSPD S VR+KMVYA
Sbjct: 301 KLGSPGDSYDDFTTSLPADECRYAVYDFDFITHENCQKSKIFFIAWSPDPSKVRSKMVYA 360

Query: 361 SSKDRFKRELDGIQVELQATDASEMSFDIIKARAF 391
           SSKDRFKRELDGIQ ELQATD SEMS DIIK RAF
Sbjct: 361 SSKDRFKRELDGIQFELQATDPSEMSLDIIKERAF 390

[Close]

BLAST of CmaCh18G012480 vs. NCBI nr
Match: gi|951025377|ref|XP_014513665.1| (PREDICTED: uncharacterized protein LOC106772039 [Vigna radiata var. radiata])

HSP 1 Score: 558.1 bits (1437), Expect = 1.2e-155
Identity = 275/394 (69.80%), Postives = 313/394 (79.44%), Query Frame = 1


Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKSE-FKRKKGESDSRNDPNKPHK 60
           MVS+RQ+LARK+++ EHPELFPKAEPTPPKDP KKKKKS  FKRK+ ES S +       
Sbjct: 1   MVSQRQRLARKRFKAEHPELFPKAEPTPPKDPNKKKKKSSAFKRKRAESKSGSG------ 60

Query: 61  KGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDK 120
              K+ PLRVPGMKPG+SCFIC AKDHIAK CP+K +WEKNKICL CRRRGH  KNCP+ 
Sbjct: 61  ---KRQPLRVPGMKPGDSCFICMAKDHIAKLCPQKTEWEKNKICLRCRRRGHRAKNCPEV 120

Query: 121 TEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKYANCFICNESGHLSKNCPKNTHGIYPK 180
            +   D K CYNCGETGHSL++CP PL+ GGTK+A CF+CN+ GHLS+NCP+NTHGIYPK
Sbjct: 121 QDAAKDVKYCYNCGETGHSLSHCPYPLEEGGTKFAECFVCNQQGHLSRNCPQNTHGIYPK 180

Query: 181 GGCCKTCGEVTHLAKDCPKKGTQ-VYAGPASGYVEMSRRPE---TRLVSGDDLEDDFMVE 240
           GGCCK CG VTHLAKDCP KG+Q   A      + +  RP    T+ +SGDD+EDDFM++
Sbjct: 181 GGCCKICGGVTHLAKDCPDKGSQGSVAANGRAAMRIEERPRGQVTKFISGDDIEDDFMID 240

Query: 241 EDNLQIKDAKLGNKKGPKVANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVE 300
           +    I+            ANAASGM V DECKLKFLELK KRNYRFI+FKIEN EV+VE
Sbjct: 241 D----IRSGDNNKSANSNDANAASGMAVLDECKLKFLELKAKRNYRFIVFKIENYEVIVE 300

Query: 301 KLGSPTETYDDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYA 360
           KLGSP ETY++FTA +P NECRYAVFDFDFTT+ENCQKSKIFFIAW+PDTS VR KMVYA
Sbjct: 301 KLGSPEETYENFTACLPANECRYAVFDFDFTTNENCQKSKIFFIAWAPDTSKVREKMVYA 360

Query: 361 SSKDRFKRELDGIQVELQATDASEMSFDIIKARA 390
           SSKDRFKRELDGIQVELQATD SEMSFDIIKARA
Sbjct: 361 SSKDRFKRELDGIQVELQATDPSEMSFDIIKARA 381

The following BLAST results are available for this feature:

BLAST of CmaCh18G012480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ADF7_ARATH	4.5e-62	86.03	Actin-depolymerizing factor 7 OS=Arabidopsis thaliana GN=ADF7 PE=2 SV=1	[more]
ADF12_ARATH	3.5e-59	83.82	Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2	[more]
ADF_LILLO	1.3e-58	79.14	Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1	[more]
ADF10_ARATH	3.7e-56	78.10	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1	[more]
ADF6_ORYSJ	8.1e-56	77.54	Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica GN=ADF6 PE=2 SV=2	[more]

BLAST of CmaCh18G012480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A164WX91_DAUCA	1.5e-152	67.40	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020244 PE=4 SV=1	[more]
I6XNH4_LINUS	4.0e-150	68.51	Putative actin-depolymerizing factor 12 OS=Linum usitatissimum PE=4 SV=1	[more]
A0A0D3B3U0_BRAOL	4.1e-147	65.70	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A078HMT2_BRANA	2.0e-146	65.53	BnaA03g12630D protein OS=Brassica napus GN=BnaA03g12630D PE=4 SV=1	[more]
I6Y9H5_LINUS	9.4e-144	67.01	Actin-depolymerizing factor 12 OS=Linum usitatissimum GN=ADF12 PE=4 SV=1	[more]

BLAST of CmaCh18G012480 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52380.1	1.8e-85	57.62	VASCULAR-RELATED NAC-DOMAIN 6	[more]
AT4G25590.1	2.5e-63	86.03	actin depolymerizing factor 7	[more]
AT5G52360.1	2.0e-60	83.82	actin depolymerizing factor 10	[more]
AT1G01750.1	2.1e-57	78.10	actin depolymerizing factor 11	[more]
AT4G00680.1	6.0e-57	76.64	actin depolymerizing factor 8	[more]

BLAST of CmaCh18G012480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778688554\|ref\|XP_011652775.1\|	8.3e-202	82.52	PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus]	[more]
gi\|659077480\|ref\|XP_008439227.1\|	9.6e-198	88.21	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis me...	[more]
gi\|747060138\|ref\|XP_011076485.1\|	6.7e-159	71.36	PREDICTED: uncharacterized protein C683.02c [Sesamum indicum]	[more]
gi\|985466114\|ref\|XP_006490392.2\|	3.1e-156	69.87	PREDICTED: uncharacterized protein LOC102611732 isoform X2 [Citrus sinensis]	[more]
gi\|951025377\|ref\|XP_014513665.1\|	1.2e-155	69.80	PREDICTED: uncharacterized protein LOC106772039 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001878	Znf_CCHC
IPR002108	ADF-H
IPR025836	Zn_knuckle_CX2CX4HX4C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0003779	actin binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005884	actin filament
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G012480.1	CmaCh18G012480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	GENE3D	G3DSA:4.10.60.10		coord: 162..199 score: 4.3E-11coord: 110..135 score: 3.7E-9coord: 76..109 score: 2.1E-8coord: 136..161 score: 9.7
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 156..171 score: 4.7E-5coord: 128..144 score: 6.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 77..93 score: 0.022coord: 128..144 score: 2.1E-4coord: 155..171 score: 8.5E-4coord: 102..118 score: 0.33coord: 182..198 score: 0
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 129..144 score: 10.263coord: 156..171 score: 9.883coord: 183..198 score: 9
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 71..119 score: 2.21E-7coord: 123..173 score: 3.87
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 267..387 score: 8.6
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 265..390 score: 8.0
IPR002108	Actin-depolymerising factor homology domain	PROFILE	PS51263	ADF_H	coord: 259..390 score: 37
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 101..117 score: 0.021coord: 77..92 score: 5.0coord: 182..198 score:
None	No IPR available	PANTHER	PTHR23002	ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN	coord: 1..202 score: 1.4E
None	No IPR available	PANTHER	PTHR23002:SF73	SUBFAMILY NOT NAMED	coord: 1..202 score: 1.4E
None	No IPR available	unknown	SSF55753	Actin depolymerizing proteins	coord: 254..388 score: 4.46

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G012480	Cla006177	Watermelon (97103) v1	cmawmB373
CmaCh18G012480	Csa3G182120	Cucumber (Chinese Long) v2	cmacuB408
CmaCh18G012480	MELO3C006910	Melon (DHL92) v3.5.1	cmameB375
CmaCh18G012480	ClCG05G008060	Watermelon (Charleston Gray)	cmawcgB365
CmaCh18G012480	CSPI03G16950	Wild cucumber (PI 183967)	cmacpiB413
CmaCh18G012480	CmoCh16G001310	Cucurbita moschata (Rifu)	cmacmoB405
CmaCh18G012480	CmoCh18G012710	Cucurbita moschata (Rifu)	cmacmoB406
CmaCh18G012480	CmoCh15G011560	Cucurbita moschata (Rifu)	cmacmoB403
CmaCh18G012480	CmoCh02G010860	Cucurbita moschata (Rifu)	cmacmoB416
CmaCh18G012480	Lsi05G020310	Bottle gourd (USVL1VR-Ls)	cmalsiB386
CmaCh18G012480	Cp4.1LG14g06100	Cucurbita pepo (Zucchini)	cmacpeB425
CmaCh18G012480	Cp4.1LG09g00860	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G012480	Cp4.1LG13g02480	Cucurbita pepo (Zucchini)	cmacpeB423
CmaCh18G012480	Cp4.1LG05g06430	Cucurbita pepo (Zucchini)	cmacpeB453
CmaCh18G012480	MELO3C006118.2	Melon (DHL92) v3.6.1	cmamedB435
CmaCh18G012480	MELO3C006911.2	Melon (DHL92) v3.6.1	cmamedB432
CmaCh18G012480	CsaV3_3G017120	Cucumber (Chinese Long) v3	cmacucB0487
CmaCh18G012480	Cla97C05G082010	Watermelon (97103) v2	cmawmbB429
CmaCh18G012480	Cla97C05G090110	Watermelon (97103) v2	cmawmbB424
CmaCh18G012480	Bhi01G000263	Wax gourd	cmawgoB0509
CmaCh18G012480	Bhi01G000955	Wax gourd	cmawgoB0507
CmaCh18G012480	CsGy3G017030	Cucumber (Gy14) v2	cgybcmaB352
CmaCh18G012480	Carg15135	Silver-seed gourd	carcmaB1368
CmaCh18G012480	Carg22102	Silver-seed gourd	carcmaB1032
CmaCh18G012480	Carg08410	Silver-seed gourd	carcmaB0996

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G012480	CmaCh15G010980	Cucurbita maxima (Rimu)	cmacmaB306
CmaCh18G012480	CmaCh16G001240	Cucurbita maxima (Rimu)	cmacmaB338
CmaCh18G012480	CmaCh02G010680	Cucurbita maxima (Rimu)	cmacmaB396

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G012480	Watermelon (97103) v2	cmawmbB403
CmaCh18G012480	Cucurbita maxima (Rimu)	cmacmaB253
CmaCh18G012480	Cucumber (Gy14) v1	cgycmaB0249
CmaCh18G012480	Cucumber (Chinese Long) v2	cmacuB420
CmaCh18G012480	Watermelon (Charleston Gray)	cmawcgB352
CmaCh18G012480	Bottle gourd (USVL1VR-Ls)	cmalsiB387
CmaCh18G012480	Cucumber (Gy14) v2	cgybcmaB630
CmaCh18G012480	Cucumber (Chinese Long) v3	cmacucB0502