Cp4.1LG09g00860 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g00860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionVASCULAR-RELATED NAC-DOMAIN 6
LocationCp4.1LG09 : 523419 .. 525934 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTTTGGGCATTGATCTACAAAGAAGCCCAATTAGAATGAGAAGAGAAATCGACATGTAGTTAAACCCCTTCGCATAAACCTCGCCGTCAGATTCGTTGAAAGAACCTCTTCGGGAATTCGCCGGAGCCGATAAACTTCCGATTATCAGGTGAAGATGGTGAGCCGGAGGCAAAAGCTTGCCCGGAAAAAGTACAGAGAAGAACATCCAGAATTGTTCCCGAAAGCAGAACCAACGCCACCGAAAGATCCGGAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATTCAAGCGCAAAAAGGGAGAATCGGATTCAAGGAACGACCCGAATAAACCACACAAAAAGGGATTTAAGAAACACCCTCTCAGAGTTCCTGGGATGAAGCCTGGTGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATCGCTAAGTTCTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGGTTTGATTTCTTGTTTGACCTTTCTTGTTTATGGTGTTTCACTGTTCACTTAGGTTATGGAAATTTTGCTCATAGACATGGTATTGTTAGGAATGTGGTGTTTATGAAATTGGTTGGGATTCAGTTTGCCTCTTCAATTTGGGGCAAACTTCTTAACTCAGTGATGCCAATGCTTAGGTTTCTCCAACAATTATGATCACTTGCTGGAAGAGCTCTACTGTGAGATCTCACATCGGTTGGAGAGGAGAACGAAGCATTCCCTATAAGGGTGTGGAAACCTCTCCCTAGGAGATGCGTTTTAAAAATCGTGAGGTTGACGATGATACGCAACGAGCCAAAGCAGACTATATCTGCTAGCGGTGAGGTTGGACTGTTACAAATGGTATTAGAGTCAGATACTAGGCGGTGTGCTAACGAGAATGCTGATCTCCCAAGGGGGATGGATTGTGAGATCCCACATCGGTTGAAGAGGGAAATGAAGACGTGTCTTAATAAGAGTATGGAAAGCTCTCCCTAGGAGACGTGTCTTAATAACCGTGAGGCTGATGGGGATATGCAATGAGCCAAAACGGACAATATCTGCTTGCGGTAGGCTTGAGCTGTTAGAAATGGTATCAGAGCCAGACACCGGGTGGTGTGTCAGTGAGAACGCTGATCTCCCAAGGAAGAAGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAAGCATTTCTTATAAAGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGGAGGAGAAGGGAAAGGCCACAGAAGACAATATCTGTTAGCGATGGGGTTTAGTAGACGTTTATACCAAATTGTTTTAGTAACAGTGTCATATCTGTTATTTGGCATTCACAGATATGCTTACTTTGCCGGAGACGAGGCCACAGCCTCAAGAACTGCCCCGACAAAACTGAAGACACAGTGGATAAGAAGCTATGCTATAATTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCTCTTCAACATGGTAAAATTTTGTTTCAATTCATACTCAAATTCATCTGTGCTTTGCATAATATGTAGAACAATTCCTTTTGGGTCTTTTCTGTTCCTAAACTCTTTCTTCTGTTTTCCATCTTGGATCTGTAGGGGGAACTAAATTTGCCAATTGTTTTATTTGTAATGAAAGCGGACACTTAAGCAAGAACTGCCCAAAGAATACTCATGGGATCTACCCTAAGGTATTTGGTTTAACTTCCACGTTATGGTCACGGGCCAGGCTCTTGGCTTCGTCTGTACGTTGCCCCGTAGTTTCCTGTATCGTATAGCTCGAATAATTTCGTTGTATGATATTCTGCAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGACTGTCCAAAAAAAGGCACCCAAGTTTATGCTGGGCCTGGTGTATCTAGTAACAGATGTAAGTCTTCCTGTTTGCTGCTGTGACATGTTTGTTGACACAAATGATCTAAAATTATAATGTTCGGGAACCGAGTTCTTCGTATCGATAAACTTGTGCTTAAGATGCTTAGGATCTCCAGATTTGTGCTAAAGCTTTGTATTGTGAGTAGTAATTCGTTTTCTTTTGTCTCAGCATCTGGATATGTGGAAATGTCGAGACGACCAGAAACAAAGCTCGTCAGTGGTGACGACCTCGAGGATGACTTCATGGTCGAGGAAGATAATTTACAGATCAAAGATGCGAAACTCGGAAAGAAAAAGTGTCCCAAAGTTGTGAAGTTCATGGATTGATAGGTCTATGGGGAAGATTAACCTCATGTGTGTTGTAAAACCTTTTCTTTTACACGCAGAGAATATAGGAAGTCCCCTAAATGTATTTTTGTCTCTTAAATATTATTAAGATTTTAGAGTTGTACAATGTTCAAGCTTTACCAGTTGATGCATTAGAGATATTGTCCCTAAAAGGGCTGACCTCACTGATAACATTACTTCTATTTCATTCTTATTATTTTGTTGATCGAACGCTATATTCTTTAAAAAGATTTAATA

mRNA sequence

TGTTTTGGGCATTGATCTACAAAGAAGCCCAATTAGAATGAGAAGAGAAATCGACATGTAGTTAAACCCCTTCGCATAAACCTCGCCGTCAGATTCGTTGAAAGAACCTCTTCGGGAATTCGCCGGAGCCGATAAACTTCCGATTATCAGGTGAAGATGGTGAGCCGGAGGCAAAAGCTTGCCCGGAAAAAGTACAGAGAAGAACATCCAGAATTGTTCCCGAAAGCAGAACCAACGCCACCGAAAGATCCGGAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATTCAAGCGCAAAAAGGGAGAATCGGATTCAAGGAACGACCCGAATAAACCACACAAAAAGGGATTTAAGAAACACCCTCTCAGAGTTCCTGGGATGAAGCCTGGTGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATCGCTAAGTTCTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTACTTTGCCGGAGACGAGGCCACAGCCTCAAGAACTGCCCCGACAAAACTGAAGACACAGTGGATAAGAAGCTATGCTATAATTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCTCTTCAACATGGGGGAACTAAATTTGCCAATTGTTTTATTTGTAATGAAAGCGGACACTTAAGCAAGAACTGCCCAAAGAATACTCATGGGATCTACCCTAAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGACTGTCCAAAAAAAGGCACCCAAGTTTATGCTGGGCCTGGTGTATCTAGTAACAGATCATCTGGATATGTGGAAATGTCGAGACGACCAGAAACAAAGCTCGTCAGTGGTGACGACCTCGAGGATGACTTCATGGTCGAGGAAGATAATTTACAGATCAAAGATGCGAAACTCGGAAAGAAAAAGTGTCCCAAAGTTGTGAAGTTCATGGATTGATAGGTCTATGGGGAAGATTAACCTCATGTGTGTTGTAAAACCTTTTCTTTTACACGCAGAGAATATAGGAAGTCCCCTAAATGTATTTTTGTCTCTTAAATATTATTAAGATTTTAGAGTTGTACAATGTTCAAGCTTTACCAGTTGATGCATTAGAGATATTGTCCCTAAAAGGGCTGACCTCACTGATAACATTACTTCTATTTCATTCTTATTATTTTGTTGATCGAACGCTATATTCTTTAAAAAGATTTAATA

Coding sequence (CDS)

ATGGTGAGCCGGAGGCAAAAGCTTGCCCGGAAAAAGTACAGAGAAGAACATCCAGAATTGTTCCCGAAAGCAGAACCAACGCCACCGAAAGATCCGGAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATTCAAGCGCAAAAAGGGAGAATCGGATTCAAGGAACGACCCGAATAAACCACACAAAAAGGGATTTAAGAAACACCCTCTCAGAGTTCCTGGGATGAAGCCTGGTGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATCGCTAAGTTCTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTACTTTGCCGGAGACGAGGCCACAGCCTCAAGAACTGCCCCGACAAAACTGAAGACACAGTGGATAAGAAGCTATGCTATAATTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCTCTTCAACATGGGGGAACTAAATTTGCCAATTGTTTTATTTGTAATGAAAGCGGACACTTAAGCAAGAACTGCCCAAAGAATACTCATGGGATCTACCCTAAGGGTGGTTGTTGTAAAACTTGTGGGGAAGTGACACATTTAGCTAAGGACTGTCCAAAAAAAGGCACCCAAGTTTATGCTGGGCCTGGTGTATCTAGTAACAGATCATCTGGATATGTGGAAATGTCGAGACGACCAGAAACAAAGCTCGTCAGTGGTGACGACCTCGAGGATGACTTCATGGTCGAGGAAGATAATTTACAGATCAAAGATGCGAAACTCGGAAAGAAAAAGTGTCCCAAAGTTGTGAAGTTCATGGATTGA

Protein sequence

MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDDFMVEEDNLQIKDAKLGKKKCPKVVKFMD
Homology
[Close]
BLAST of Cp4.1LG09g00860 vs. Swiss-Prot
Match: YL92_SCHPO (Uncharacterized protein C683.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC683.02c PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.4e-24
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 1 

Query: 99  QWEKNKICLLCRRRGHSLKNCPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFAN 158
           Q  ++K C  CR++GH +++CP+  ++     +C+ CG   HSL  C +    G  KFA 
Sbjct: 72  QRNRDKFCFACRQQGHIVQDCPEAKDNV---SICFRCGSKEHSLNACSKK---GPLKFAK 131

Query: 159 CFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDC 200
           CFIC+E+GHLS  C +N  G+YPKGGCCK C  V HLAKDC
Sbjct: 132 CFICHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDC 166

[Close]
BLAST of Cp4.1LG09g00860 vs. Swiss-Prot
Match: ZCHC9_HUMAN (Zinc finger CCHC domain-containing protein 9 OS=Homo sapiens GN=ZCCHC9 PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21
Identity = 60/165 (36.36%), Postives = 79/165 (47.88%), Query Frame = 1 

Query: 105 ICLLCRRRGHSLKNCPDKTEDT-VDKKLCYNCGETGHSLANCPQPLQH--GGTKFANCFI 164
           +C  CR+ GH + +CP   E+  +   +CY CG T H +  C   +    G   FA CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188

Query: 165 CNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYV 224
           C E GHLS++CP N  G+Y  GG CK CG V HL KDCP+            S  S   V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE------------SQNSERMV 248

Query: 225 EMSRRPETKLVSGDDLEDDFMVEEDNLQIKDAKLGKKKCPKVVKF 267
            + R    K +S D         E+ L +   +  K K PKVV F
Sbjct: 249 TVGR--WAKGMSAD--------YEEILDVPKPQKPKTKIPKVVNF 271

[Close]
BLAST of Cp4.1LG09g00860 vs. Swiss-Prot
Match: Y3800_DROME (CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster GN=CG3800 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.3e-19
Identity = 44/125 (35.20%), Postives = 63/125 (50.40%), Query Frame = 1 

Query: 79  ESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKTEDTVDKKLCYNCGET 138
           E C+ C    H A+ CPE+A+      C  C   GH  K+C        D   CY C +T
Sbjct: 55  EKCYKCNQFGHFARACPEEAER-----CYRCNGIGHISKDCTQ-----ADNPTCYRCNKT 114

Query: 139 GHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKD 198
           GH + NCP+ +   G    +C+ CN +GH+SKNCP+ +         C  CG+  HL ++
Sbjct: 115 GHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSK-------TCYGCGKSGHLRRE 162

Query: 199 CPKKG 204
           C +KG
Sbjct: 175 CDEKG 162

[Close]
BLAST of Cp4.1LG09g00860 vs. Swiss-Prot
Match: ZCHC9_MOUSE (Zinc finger CCHC domain-containing protein 9 OS=Mus musculus GN=Zcchc9 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 3.0e-17
Identity = 73/240 (30.42%), Postives = 103/240 (42.92%), Query Frame = 1 

Query: 34  KKKKKKKKSEFKRK--KGESDSRNDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIA 93
           K+KK KKK E+  +   G  +     ++    G     +     +  E   +   KD   
Sbjct: 57  KRKKNKKKKEYLNEDVNGFMEYLKQNSQVLHNG---QLIAADSQEVREEIAVALKKDSRR 116

Query: 94  KFCPEKAQWEKNK--ICLLCRRRGHSLKNCPDKTEDT-VDKKLCYNCGETGHSLANCPQP 153
           +    K Q  K    +C  CR+ GH + +CP   E   +   +CY CG T H ++ C   
Sbjct: 117 EGRRLKRQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRAN 176

Query: 154 LQH--GGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQV 213
           +    G   FA CF+C E GHLS++CP NT G+Y  GG CK CG V H  KDC +     
Sbjct: 177 VDPALGEFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDCRE----- 236

Query: 214 YAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDDFMVEEDNLQIKDAKLGKKKCPKVVKF 267
                  +  S   + + R    K +S D         ED L +   +  K K PKVV F
Sbjct: 237 -------NQNSDRIITVGR--WAKGMSAD--------YEDVLDVPKLQKPKTKVPKVVNF 271

[Close]
BLAST of Cp4.1LG09g00860 vs. Swiss-Prot
Match: HEXP_LEIMA (DNA-binding protein HEXBP OS=Leishmania major GN=HEXBP PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-15
Identity = 39/123 (31.71%), Postives = 58/123 (47.15%), Query Frame = 1 

Query: 96  EKAQWEKNKICLLCRRRGHSLKNCPDKTEDTVDKKL-CYNCGETGHSLANCPQPLQHGGT 155
           ++ + E +  C  C + GH  + CP+      ++   C+ CGE GH    CP   + G  
Sbjct: 8   KRPRTESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAA 67

Query: 156 KFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSS 215
               CF C E+GH+S++CP +      KG  C  CG+  HL++DCP        G G   
Sbjct: 68  GAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKR 127

Query: 216 NRS 218
            RS
Sbjct: 128 GRS 130

[Close]
BLAST of Cp4.1LG09g00860 vs. TrEMBL
Match: A0A0A0L9S9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182130 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 1.6e-134
Identity = 233/268 (86.94%), Postives = 247/268 (92.16%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MV++RQ+LARKKY+EEHPELFPKAEPTPPKDP+   KKKKKS+FKRKK ES+S  DP KP
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPD---KKKKKSKFKRKKEESNSNRDPTKP 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           HKKGFKKHPLRVPGMKPGESCFICKA DHIAK CPEKAQWEKNKICLLCRRRGHSLKNCP
Sbjct: 61  HKKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIY 180
           DK E TVDKKLCYNCGETGHSLANCPQPLQ GGTKFA+CFICNESGHLSKNCPKNTHGIY
Sbjct: 121 DKNEGTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDD 240
           PKGGCCKTCGEVTHLAKDCPKKGTQV+   GV   RSSGYVEM RRPETKL+SGDDLEDD
Sbjct: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDD 240

Query: 241 FMVEEDNLQIKDAKLGKKKCPKVVKFMD 269
           FM++E +LQIKDAK+GKKK PKVVKFMD
Sbjct: 241 FMIDEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]
BLAST of Cp4.1LG09g00860 vs. TrEMBL
Match: B9R9B0_RICCO (Actin depolymerizing factor, putative OS=Ricinus communis GN=RCOM_1495930 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.4e-98
Identity = 183/272 (67.28%), Postives = 215/272 (79.04%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MVS+RQ+LARKK+R+EHPELFPK EPTPPKDP  KKKKK  ++FKRK+ ES    DPN+P
Sbjct: 1   MVSQRQRLARKKFRQEHPELFPKPEPTPPKDPN-KKKKKNNTKFKRKRSESKESKDPNEP 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           +KK FKKHPLRVPGMKPGESCFICKAKDHIAK CP+KA+WE+NKICLLCR+RGHSLK CP
Sbjct: 61  NKKRFKKHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWERNKICLLCRQRGHSLKRCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIY 180
           +K ++ VD+KLCYNCGETGHSL+NCPQPL++GGTK+ANCFICNESGHLSK+CP+NT GIY
Sbjct: 121 NKKDENVDRKLCYNCGETGHSLSNCPQPLKNGGTKYANCFICNESGHLSKDCPQNTRGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDD 240
           PKGGCCK CG VTHLA+DCP+KG +   G   +S       E      TK +SGD+L+DD
Sbjct: 181 PKGGCCKICGGVTHLARDCPEKGKR---GSLAASGEVIEKEERQTPKLTKFISGDELDDD 240

Query: 241 FMVE-------EDNLQIKD--AKLGKKKCPKV 264
           FM E       E     KD  AKL KK+  K+
Sbjct: 241 FMTENTYAVEKERGSDSKDGHAKLKKKQGHKL 268

[Close]
BLAST of Cp4.1LG09g00860 vs. TrEMBL
Match: A0A067JQL0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26106 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.0e-97
Identity = 179/267 (67.04%), Postives = 207/267 (77.53%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MVS+RQ+LARK++RE HPELFPK EPTPPKDP+  KKK KKS+FKRK   S    DPN+ 
Sbjct: 1   MVSQRQRLARKRFREAHPELFPKPEPTPPKDPD--KKKNKKSKFKRKSSNSREPRDPNER 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           ++K F+KHP RVPGMKPGESCFICKAKDHIAK CP+K +WEKNKICLLCRRRGHSLK CP
Sbjct: 61  NQKRFRKHPFRVPGMKPGESCFICKAKDHIAKLCPQKDEWEKNKICLLCRRRGHSLKRCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIY 180
           +K ++TVDKKLCYNCGE GHSL+ CPQPLQ GGTKFANCFICNESGHLSK CP+NTHGIY
Sbjct: 121 NKKDETVDKKLCYNCGEIGHSLSKCPQPLQDGGTKFANCFICNESGHLSKECPQNTHGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDD 240
           PKGGCCK CG VTHLAKDCP+KG +   G   S        E  R   TK +SGD+L+DD
Sbjct: 181 PKGGCCKICGGVTHLAKDCPEKGKR---GSPASGKEVIEEGERPRPKVTKFISGDELDDD 240

Query: 241 FMVEEDNLQIKDA-KLGKKKCPKVVKF 267
           FM + +  +     +  KK+  +VV F
Sbjct: 241 FMTDGNQKEKSSGNEKSKKQLQRVVNF 262

[Close]
BLAST of Cp4.1LG09g00860 vs. TrEMBL
Match: K4BF47_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 5.9e-97
Identity = 183/268 (68.28%), Postives = 210/268 (78.36%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MVS+RQ++ARK+Y+E +PELFPK EPTPPKDP KKKKKK  S FK+KKGES    DPNK 
Sbjct: 1   MVSKRQRIARKRYKEANPELFPKPEPTPPKDPNKKKKKK--STFKKKKGES---KDPNK- 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
            K+ F KHP RV GMKPGESCFICK  DHIA+ CP KA+WEKNKICLLCRRRGHSLKNCP
Sbjct: 61  -KRSFTKHPFRVAGMKPGESCFICKEHDHIARDCPRKAEWEKNKICLLCRRRGHSLKNCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIY 180
           +K ++ VDKKLCYNCGET HSLANCP PLQ GGTKFA+CFIC E GHLSK+CPKNTHGIY
Sbjct: 121 NKNDEVVDKKLCYNCGETSHSLANCPYPLQDGGTKFASCFICKEQGHLSKDCPKNTHGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDD 240
           PKGGCCK CG VTHLA+DCP K  +  +   +   + S + +  R   TKL SGDDLEDD
Sbjct: 181 PKGGCCKICGGVTHLARDCPNKSGKA-SDAAIGRFKISQFEDRPRGQVTKLSSGDDLEDD 240

Query: 241 FMVEEDNL-QIKDAKLGKKKCPKVVKFM 268
           F  + D++ +  DAKL KKK PKVV F+
Sbjct: 241 FNFKADDVNEDDDAKLKKKKEPKVVNFV 260

[Close]
BLAST of Cp4.1LG09g00860 vs. TrEMBL
Match: W9SNN0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006495 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95
Identity = 187/287 (65.16%), Postives = 208/287 (72.47%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKR--KKGESDSRNDPN 60
           MVS+RQK ARK+++  +PELFPK EPTPPKDP    KKKKKS+FKR  KK +  SR D  
Sbjct: 1   MVSKRQKEARKRFKVANPELFPKPEPTPPKDP---NKKKKKSKFKRDEKKADPKSRGDAT 60

Query: 61  KP-HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLK 120
           K   KKG +KHPLRVPGMKPGESCFICKAKDHIAK CPEKAQWEKNKICLLCR RGHSLK
Sbjct: 61  KKLIKKGLRKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRSRGHSLK 120

Query: 121 NCPDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTH 180
           NCP+K + TVDKKLCYNCG++GHSL  CPQPLQ GGTKFA CFIC ESGHLSKNCP+NTH
Sbjct: 121 NCPNKNDKTVDKKLCYNCGQSGHSLDKCPQPLQEGGTKFATCFICKESGHLSKNCPQNTH 180

Query: 181 GIYPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDL 240
           GIYPKGGCCK CG VTHLAKDCP KG +  A    +S   S   +  R   TK  SGDDL
Sbjct: 181 GIYPKGGCCKICGGVTHLAKDCPNKGNRESAASDKASRTFSISDDRPRGQVTKFFSGDDL 240

Query: 241 EDDFMVEE-----------------DNLQIKDAKLGKKKCPKVVKFM 268
           EDDFM ++                  N Q  + K  KK+ PKVV F+
Sbjct: 241 EDDFMADDTYGGKKDKSTEPKAGSGSNSQESNLKSEKKQGPKVVNFV 284

[Close]
BLAST of Cp4.1LG09g00860 vs. TAIR10
Match: AT5G52380.1 (AT5G52380.1 VASCULAR-RELATED NAC-DOMAIN 6)

HSP 1 Score: 313.5 bits (802), Expect = 1.2e-85
Identity = 161/278 (57.91%), Postives = 199/278 (71.58%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MV++R++LA+K+Y+E +PELFPKAEPTPPKDP KKKKKK  S FK+KK  S +    ++P
Sbjct: 1   MVNQRRRLAQKRYKEANPELFPKAEPTPPKDPNKKKKKK--SLFKKKKPGSST----DRP 60

Query: 61  HKKGFK-KHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNC 120
            + G   +HPLRVPGMKPGE CFIC +K HIAK CPEK++WE+NKICL CRRRGHSLKNC
Sbjct: 61  QRTGSSTRHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNC 120

Query: 121 PDKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGI 180
           P+K  ++ +KKLCYNCG+TGHSL++CP P++ GGTKFA+CFIC   GH+SKNCP+N HGI
Sbjct: 121 PEKNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGI 180

Query: 181 YPKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLED 240
           YP GGCCK CG V HL KDCP K  Q  A P     ++S +    R   TK  SGDDLED
Sbjct: 181 YPMGGCCKVCGSVAHLVKDCPDKFNQESAQP----KKTSRFDATPRGKLTKF-SGDDLED 240

Query: 241 DFMVE----------EDNLQIKDAKLGKKKCPKVVKFM 268
           DF  E          +D+ Q       KK+ PK+V F+
Sbjct: 241 DFTEEPKSSKKINTSDDSAQNSVEVKKKKQGPKIVNFV 267

[Close]
BLAST of Cp4.1LG09g00860 vs. TAIR10
Match: AT3G43590.1 (AT3G43590.1 zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 74.7 bits (182), Expect = 9.6e-14
Identity = 39/124 (31.45%), Postives = 55/124 (44.35%), Query Frame = 1 

Query: 76  KPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCPDKTEDTVDKKLCYNC 135
           K  + CFIC + +H AK C       K   C +C++ GH  K+CPDK ++     +C  C
Sbjct: 186 KRRKPCFICGSLEHGAKQC------SKGHDCYICKKTGHRAKDCPDKYKNGSKGAVCLRC 245

Query: 136 GETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHL 195
           G+ GH +  C         K   C+IC   GHL    P N+         C  CG++ H 
Sbjct: 246 GDFGHDMILCKYEYSKEDLKDVQCYICKSFGHLCCVEPGNS---LSWAVSCYRCGQLGHS 300

Query: 196 AKDC 200
              C
Sbjct: 306 GLAC 300

[Close]
BLAST of Cp4.1LG09g00860 vs. TAIR10
Match: AT4G36020.1 (AT4G36020.1 cold shock domain protein 1)

HSP 1 Score: 64.7 bits (156), Expect = 9.9e-11
Identity = 43/132 (32.58%), Postives = 60/132 (45.45%), Query Frame = 1 

Query: 106 CLLCRRRGHSLKNCP------DKTEDTVDKKLCYNCGETGHSLANCPQP---LQHGGTKF 165
           C  C   GH  K+C            +   + CYNCG+TGH   +C       Q G TK 
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKG 161

Query: 166 AN--CFICNESGHLSKNCPKNTHGIYPKGGC-------CKTCGEVTHLAKDCPKKGTQVY 220
            N  C+ C + GH++++C + + G   + G        C TCG+V H A+DC +K   V 
Sbjct: 162 GNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQK---VA 221

[Close]
BLAST of Cp4.1LG09g00860 vs. TAIR10
Match: AT2G17870.1 (AT2G17870.1 cold shock domain protein 3)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 37/104 (35.58%), Postives = 48/104 (46.15%), Query Frame = 1 

Query: 132 CYNCGETGHSLANCPQPLQHGGTKFAN-----------CFICNESGHLSKNCPKNTHGIY 191
           C+NCGE GH   +C      GG  F             C++C + GH +++C ++  G  
Sbjct: 96  CFNCGEVGHMAKDCDGG--SGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGNS 155

Query: 192 PKGGC----CKTCGEVTHLAKDC-PKKGTQVYAGPGVSSNRSSG 220
             GG     C +CGEV HLAKDC    G   Y G G    R SG
Sbjct: 156 GGGGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGG---GRGSG 194

[Close]
BLAST of Cp4.1LG09g00860 vs. NCBI nr
Match: gi|778688554|ref|XP_011652775.1| (PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 2.3e-134
Identity = 233/268 (86.94%), Postives = 247/268 (92.16%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MV++RQ+LARKKY+EEHPELFPKAEPTPPKDP+   KKKKKS+FKRKK ES+S  DP KP
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPD---KKKKKSKFKRKKEESNSNRDPTKP 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           HKKGFKKHPLRVPGMKPGESCFICKA DHIAK CPEKAQWEKNKICLLCRRRGHSLKNCP
Sbjct: 61  HKKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIY 180
           DK E TVDKKLCYNCGETGHSLANCPQPLQ GGTKFA+CFICNESGHLSKNCPKNTHGIY
Sbjct: 121 DKNEGTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDD 240
           PKGGCCKTCGEVTHLAKDCPKKGTQV+   GV   RSSGYVEM RRPETKL+SGDDLEDD
Sbjct: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDD 240

Query: 241 FMVEEDNLQIKDAKLGKKKCPKVVKFMD 269
           FM++E +LQIKDAK+GKKK PKVVKFMD
Sbjct: 241 FMIDEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]
BLAST of Cp4.1LG09g00860 vs. NCBI nr
Match: gi|700202244|gb|KGN57377.1| (hypothetical protein Csa_3G182130 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 2.3e-134
Identity = 233/268 (86.94%), Postives = 247/268 (92.16%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MV++RQ+LARKKY+EEHPELFPKAEPTPPKDP+   KKKKKS+FKRKK ES+S  DP KP
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPD---KKKKKSKFKRKKEESNSNRDPTKP 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           HKKGFKKHPLRVPGMKPGESCFICKA DHIAK CPEKAQWEKNKICLLCRRRGHSLKNCP
Sbjct: 61  HKKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIY 180
           DK E TVDKKLCYNCGETGHSLANCPQPLQ GGTKFA+CFICNESGHLSKNCPKNTHGIY
Sbjct: 121 DKNEGTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDD 240
           PKGGCCKTCGEVTHLAKDCPKKGTQV+   GV   RSSGYVEM RRPETKL+SGDDLEDD
Sbjct: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDD 240

Query: 241 FMVEEDNLQIKDAKLGKKKCPKVVKFMD 269
           FM++E +LQIKDAK+GKKK PKVVKFMD
Sbjct: 241 FMIDEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]
BLAST of Cp4.1LG09g00860 vs. NCBI nr
Match: gi|659077480|ref|XP_008439227.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis melo])

HSP 1 Score: 447.6 bits (1150), Expect = 1.5e-122
Identity = 214/246 (86.99%), Postives = 225/246 (91.46%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MVS+RQ+LARKKYRE HPELFPKAEPTPPKDP+    KKKKS+FKRKKGES+S  DPNKP
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEPTPPKDPD----KKKKSKFKRKKGESNSNRDPNKP 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           HKKGFKKHPLRVPGMKPGESCFICKAKDHIAK CPEKAQWEKNKICLLCRRRGHSLKNCP
Sbjct: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIY 180
           DK E T+DKKLCYNCGETGHSLANCPQPLQ GGTKFA+CFICNESGHLSKNCPKNTHGIY
Sbjct: 121 DKNEGTMDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDD 240
           PKGGCCKTCGEVTHLAKDCPKKGTQV+         +SGYVEM RRPETKLVSGDDLEDD
Sbjct: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVF------DRAASGYVEMPRRPETKLVSGDDLEDD 236

Query: 241 FMVEED 247
           FM++ED
Sbjct: 241 FMIDED 236

[Close]
BLAST of Cp4.1LG09g00860 vs. NCBI nr
Match: gi|1000984348|ref|XP_015577911.1| (PREDICTED: uncharacterized protein LOC8270014 [Ricinus communis])

HSP 1 Score: 371.7 bits (953), Expect = 1.1e-99
Identity = 186/275 (67.64%), Postives = 217/275 (78.91%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MVS+RQ+LARKK+R+EHPELFPK EPTPPKDP  KKKKK  ++FKRK+ ES    DPN+P
Sbjct: 1   MVSQRQRLARKKFRQEHPELFPKPEPTPPKDPN-KKKKKNNTKFKRKRSESKESKDPNEP 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           +KK FKKHPLRVPGMKPGESCFICKAKDHIAK CP+KA+WE+NKICLLCR+RGHSLK CP
Sbjct: 61  NKKRFKKHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWERNKICLLCRQRGHSLKRCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIY 180
           +K ++ VD+KLCYNCGETGHSL+NCPQPL++GGTK+ANCFICNESGHLSK+CP+NT GIY
Sbjct: 121 NKKDENVDRKLCYNCGETGHSLSNCPQPLKNGGTKYANCFICNESGHLSKDCPQNTRGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDD 240
           PKGGCCK CG VTHLA+DCP+KG +   G   +S       E      TK +SGD+L+DD
Sbjct: 181 PKGGCCKICGGVTHLARDCPEKGKR---GSLAASGEVIEKEERQTPKLTKFISGDELDDD 240

Query: 241 FMVE-------EDNLQIKD--AKLGKKKCPKVVKF 267
           FM E       E     KD  AKL KK+  KVV F
Sbjct: 241 FMTENTYAVEKERGSDSKDGHAKLKKKQGHKVVNF 271

[Close]
BLAST of Cp4.1LG09g00860 vs. NCBI nr
Match: gi|223549900|gb|EEF51387.1| (actin depolymerizing factor, putative [Ricinus communis])

HSP 1 Score: 366.7 bits (940), Expect = 3.5e-98
Identity = 183/272 (67.28%), Postives = 215/272 (79.04%), Query Frame = 1 

Query: 1   MVSRRQKLARKKYREEHPELFPKAEPTPPKDPEKKKKKKKKSEFKRKKGESDSRNDPNKP 60
           MVS+RQ+LARKK+R+EHPELFPK EPTPPKDP  KKKKK  ++FKRK+ ES    DPN+P
Sbjct: 1   MVSQRQRLARKKFRQEHPELFPKPEPTPPKDPN-KKKKKNNTKFKRKRSESKESKDPNEP 60

Query: 61  HKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKNKICLLCRRRGHSLKNCP 120
           +KK FKKHPLRVPGMKPGESCFICKAKDHIAK CP+KA+WE+NKICLLCR+RGHSLK CP
Sbjct: 61  NKKRFKKHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWERNKICLLCRQRGHSLKRCP 120

Query: 121 DKTEDTVDKKLCYNCGETGHSLANCPQPLQHGGTKFANCFICNESGHLSKNCPKNTHGIY 180
           +K ++ VD+KLCYNCGETGHSL+NCPQPL++GGTK+ANCFICNESGHLSK+CP+NT GIY
Sbjct: 121 NKKDENVDRKLCYNCGETGHSLSNCPQPLKNGGTKYANCFICNESGHLSKDCPQNTRGIY 180

Query: 181 PKGGCCKTCGEVTHLAKDCPKKGTQVYAGPGVSSNRSSGYVEMSRRPETKLVSGDDLEDD 240
           PKGGCCK CG VTHLA+DCP+KG +   G   +S       E      TK +SGD+L+DD
Sbjct: 181 PKGGCCKICGGVTHLARDCPEKGKR---GSLAASGEVIEKEERQTPKLTKFISGDELDDD 240

Query: 241 FMVE-------EDNLQIKD--AKLGKKKCPKV 264
           FM E       E     KD  AKL KK+  K+
Sbjct: 241 FMTENTYAVEKERGSDSKDGHAKLKKKQGHKL 268

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g00860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YL92_SCHPO7.4e-2447.52Uncharacterized protein C683.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
ZCHC9_HUMAN1.2e-2136.36Zinc finger CCHC domain-containing protein 9 OS=Homo sapiens GN=ZCCHC9 PE=1 SV=2[more]
Y3800_DROME9.3e-1935.20CCHC-type zinc finger protein CG3800 OS=Drosophila melanogaster GN=CG3800 PE=1 S... [more]
ZCHC9_MOUSE3.0e-1730.42Zinc finger CCHC domain-containing protein 9 OS=Mus musculus GN=Zcchc9 PE=2 SV=2[more]
HEXP_LEIMA1.3e-1531.71DNA-binding protein HEXBP OS=Leishmania major GN=HEXBP PE=3 SV=1[more]
BLAST of Cp4.1LG09g00860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9S9_CUCSA1.6e-13486.94Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182130 PE=4 SV=1[more]
B9R9B0_RICCO2.4e-9867.28Actin depolymerizing factor, putative OS=Ricinus communis GN=RCOM_1495930 PE=4 S... [more]
A0A067JQL0_JATCU2.0e-9767.04Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26106 PE=4 SV=1[more]
K4BF47_SOLLC5.9e-9768.28Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
W9SNN0_9ROSA1.1e-9565.16Uncharacterized protein OS=Morus notabilis GN=L484_006495 PE=4 SV=1[more]
BLAST of Cp4.1LG09g00860 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52380.11.2e-8557.91 VASCULAR-RELATED NAC-DOMAIN 6[more]
AT3G43590.19.6e-1431.45 zinc knuckle (CCHC-type) family protein[more]
AT4G36020.19.9e-1132.58 cold shock domain protein 1[more]
AT2G17870.11.2e-0835.58 cold shock domain protein 3[more]
BLAST of Cp4.1LG09g00860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688554|ref|XP_011652775.1|2.3e-13486.94PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus][more]
gi|700202244|gb|KGN57377.1|2.3e-13486.94hypothetical protein Csa_3G182130 [Cucumis sativus][more]
gi|659077480|ref|XP_008439227.1|1.5e-12286.99PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis me... [more]
gi|1000984348|ref|XP_015577911.1|1.1e-9967.64PREDICTED: uncharacterized protein LOC8270014 [Ricinus communis][more]
gi|223549900|gb|EEF51387.1|3.5e-9867.28actin depolymerizing factor, putative [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR025836Zn_knuckle_CX2CX4HX4C
IPR001878Znf_CCHC
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0008150 biological_process
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003779 actin binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g00860.1Cp4.1LG09g00860.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 113..140
score: 3.5E-9coord: 165..202
score: 3.2E-11coord: 79..112
score: 1.1E-8coord: 141..164
score: 6.4
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 131..147
score: 3.9E-6coord: 159..174
score: 3.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 185..201
score: 0.019coord: 80..96
score: 0.022coord: 158..174
score: 8.5E-4coord: 131..147
score: 2.1E-4coord: 105..121
score:
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 132..147
score: 10.263coord: 186..201
score: 9.026coord: 159..174
score: 9
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 125..175
score: 1.83E-11coord: 74..122
score: 1.2
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 104..120
score: 0.012coord: 185..201
score: 1.6coord: 80..95
score:
NoneNo IPR availablePANTHERPTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINcoord: 1..205
score: 4.7E
NoneNo IPR availablePANTHERPTHR23002:SF73SUBFAMILY NOT NAMEDcoord: 1..205
score: 4.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g00860CmaCh16G001240Cucurbita maxima (Rimu)cmacpeB339
Cp4.1LG09g00860CmaCh18G012480Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g00860CmoCh16G001310Cucurbita moschata (Rifu)cmocpeB303
Cp4.1LG09g00860CmoCh18G012710Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g00860Cla006176Watermelon (97103) v1cpewmB032
Cp4.1LG09g00860Csa3G182130Cucumber (Chinese Long) v2cpecuB039
Cp4.1LG09g00860MELO3C006911Melon (DHL92) v3.5.1cpemeB043
Cp4.1LG09g00860ClCG05G008070Watermelon (Charleston Gray)cpewcgB046
Cp4.1LG09g00860CSPI03G16960Wild cucumber (PI 183967)cpecpiB034
Cp4.1LG09g00860Lsi05G012240Bottle gourd (USVL1VR-Ls)cpelsiB035
Cp4.1LG09g00860MELO3C006911.2Melon (DHL92) v3.6.1cpemedB050
Cp4.1LG09g00860CsaV3_3G017130Cucumber (Chinese Long) v3cpecucB0039
Cp4.1LG09g00860Bhi01G000955Wax gourdcpewgoB0025
Cp4.1LG09g00860CsGy3G017040Cucumber (Gy14) v2cgybcpeB287
Cp4.1LG09g00860Carg15135Silver-seed gourdcarcpeB1373
Cp4.1LG09g00860Carg22103Silver-seed gourdcarcpeB1038
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g00860Cp4.1LG14g06100Cucurbita pepo (Zucchini)cpecpeB023
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g00860Cucurbita pepo (Zucchini)cpecpeB021
Cp4.1LG09g00860Cucurbita pepo (Zucchini)cpecpeB052
Cp4.1LG09g00860Cucurbita pepo (Zucchini)cpecpeB057
Cp4.1LG09g00860Cucumber (Gy14) v1cgycpeB0240
Cp4.1LG09g00860Cucurbita maxima (Rimu)cmacpeB253
Cp4.1LG09g00860Cucurbita maxima (Rimu)cmacpeB301
Cp4.1LG09g00860Cucurbita maxima (Rimu)cmacpeB598
Cp4.1LG09g00860Cucurbita moschata (Rifu)cmocpeB264
Cp4.1LG09g00860Cucurbita moschata (Rifu)cmocpeB546
Cp4.1LG09g00860Cucumber (Chinese Long) v2cpecuB038
Cp4.1LG09g00860Bottle gourd (USVL1VR-Ls)cpelsiB039
Cp4.1LG09g00860Watermelon (Charleston Gray)cpewcgB044
Cp4.1LG09g00860Cucumber (Gy14) v2cgybcpeB584
Cp4.1LG09g00860Melon (DHL92) v3.6.1cpemedB049
Cp4.1LG09g00860Silver-seed gourdcarcpeB0994
Cp4.1LG09g00860Cucumber (Chinese Long) v3cpecucB0045