CsaV3_3G017130 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G017130
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionZinc finger CCHC domain-containing protein
Locationchr3 : 12826760 .. 12830122 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGCCCAATTTTGAATGAGAAGAAACCGACATGTAGTTTTTACTTTATACCCGTTCGCATAAACCTCGCCGTCACGCCGTTCGTTGAGAAAACCTCATCGGGATTTCACCGGAGCTGTCACCTTCCGATTCTTACGGACCCTGTTTTCAGGTGAAGATGGTGAACCAAAGGCAAAGACTTGCTCGGAAAAAGTACAAAGAAGAGCACCCAGAACTTTTCCCGAAAGCAGAGCCAACGCCACCGAAAGACCCGGACAAGAAGAAGAAGAAGAGTAAATTCAAGCGCAAAAAGGAAGAATCGAACTCAAACAGAGACCCAACTAAACCCCACAAAAAGGGTTTTAAGAAACACCCTCTTAGAGTACCTGGGATGAAGCCTGGAGAAAGCTGCTTCATCTGCAAAGCTAATGACCACATTGCTAAGCTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGGTCTGTCTTTCTGTTTTACCTTTTGTGTTTCTGGAGTTTCACTGTCTGCTCAGTTCATGGAAAATTTGATCATTGGATAGGATTTTCTTTCAAAGCTACTATAGTAAGGAATGTGGTATCTGTGACAGTGGTTAGGATTGGATTCTGCTCTCCAATTTTAGGGAAACTTCTTAACTTAGTTGTTACTATGCTTAGGGTTCTTCTATCAACTATTGTCACTTTGGAATCGATTGTTAGAGTCCTTGGGGATAGAGGGACATGGATTATTTGGAAGAGCTCTGTGATGATAATCTCTTGGGGAAGTGGAAGGATTGTAAAGAAATAGTTTTTTAAGAAAAATATGGGGATATGCTTTCAAAGTGGGAATTCTGTTTACGGCATGTTAATGGTGTTAAACAAAGGTTTATGAAACTTTATATGCTGCTGGGGTAGGATGTGATTTGTTCGTTTATTCCACCCTTTGGTTCTTGCAGTCTCCAATTTTCTTTCTATGCTAGGCTGAGCTATATGGTGGAAGATTTGGAATGAAAGAAATACAAAATTTTTTCAAGACAAAGCAAGAACCCCTGTGGAAGTTCTTAGTTCAGCTTTATTCAAAGTACTTTTTGGGTGTAAAAAACATACATCTGTTCTCGAGTTACAACTTAGATTTCCTTGTATCATTTTAAACAAAGCATGATGGGCTCATTTTGTAACACTGTGGATATTCCATTCATCAATGAAATTGTTTCTTATCCAAAAAAAGGCACATGGTCCTTCCTTTATGCTTTTGAATTTAAGGTTGTTTTTGGCTTTTGCATTCAAGGACATTAATAGCAAATTTTTTGTATTATTGCCATGCTGAAGGGAGTCATATGTTCATCTCTGTTACTTGACATTCACAGATATGCTTGCTTTGCCGGAGACGAGGGCACAGTCTCAAGAATTGTCCAGACAAAAATGAAGGGACCGTGGACAAGAAGTTATGCTATAACTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCCCTTCAAGATGGTAAATTTTATTACAAATTCAAACTCATATTTATCAGTGCTTTGCATAATATGTAGAATATTTCATTTTGGGTTTCCTTGAGGCACTTGTATTCCCATCTTTCTAAACCAAATGCCTCTCGTATATTCCTATGAAATGAAGTGCTTTTGTGATACATATGCTCTGGAGCTTGTAAGGATTTATTTTTTTATTTTCTGAATTATGTGTATTGTTTTCCATCTTGGATCTGCAGGGGGAACTAAATTCGCCAGTTGTTTTATTTGTAATGAAAGTGGACACTTAAGCAAGAATTGTCCGAAGAATACTCACGGGATCTACCCTAAGGTATTTGGTTTAACCTTCACATATTTAACTTTCATGTGATTAGCAATGGTCACACACCAAACTCTTGGCTTCCCTATAATGTTCTAGGTTTGCCCATAGTCTCCTTGTATCATACAACATTAAGAATTTCCTTGGATGATATTCTGCAGGGTGGTTGTTGTAAAACTTGTGGAGAAGTCACACATTTAGCTAAGGATTGTCCAAAGAAAGGAACCCAAGTGTTTGATAGGGCTGGTGTATTTGGTTACAGATGTAAGTATTCCTGCTTCTTGTTTCTTATTTGTATTTTTATTTGTAAGTTTCCAACTTTGTTTCTATCGTTTCGTTTTTAGTGTGTGCTGTTGTGACATGTTTGTTGGTACAATCTAAAAATTATAACCATTTTGAAAAAAGATGTCATAATTTCTTCATATGCATTATTCCTTCTTTATCATTGGGTTATTATGTACATCGAAGAATAGAGCTTCCTTATCTGTCTATACAGTTTTCTTGAAGATATTTAACTCAATATAACTGAGATTAGAACAACAAAGCCAAAGTCATTATAACTGAGCTAACCATCTCCATTTGACTGAGATACGAGGGTCAGACATAGAAATCATGACCTTTGGTTCTTAAGGATATCATATCATTTCACCCACTCACGGTCAAGCCTACTTGGAGGAGCATCAAATAACATTGACATCATGATCTTCATTCCTTTTCTAGGAGTTTGCAGCTGTTCTTTACTACCATATTTATTCATCAAAGTAAATGATTATGAAGCTTCCTAAGGCCAACTCTAACCAGTCAAAATACTCCAAAGTTTTTTGCCAGTATTTGTTTTCACATCGATAATTTCTTGAACACACAAAAAAATAGTATTCCACAGATGTTTCTATAAAAGATGCTCTACTGGAGAAAGGTCACGGTTCAAAATTACTACTCCAAAAGCATCATCTCATGTGCCAATTTGTGGACTAAAAGGGTGGGAGATAACTGGGAATGAGGAACCAAGACTTCTGGATTGACTAACTTCTGCTAAAACTATCTATAATAATATCTGGAAAAGGTGAAACGAAACATACTATTATGAGTAATTATTTATTTTCTTGTCTCAGCATCTGGATACGTGGAAATGCCAAGACGACCAGAGACGAAGCTAATCAGTGGTGATGATCTTGAGGATGACTTCATGATTGATGAAGGTAGTTTGCAGATCAAAGATGCAAAAATGGGAAAGAAAAAGGGTCCTAAAGTTGTGAAGTTCATGGACTGATTGATAGCTGTATGAGATAAATTGATTTGTTCTCTTGTGTTTGTTGTAAAGACCCTTTGTTTTGCACACAAGAGAAAACGGGGTAGTTTTGGAACGTTGGCCCATTATTATTTATAAGCGTTTCTCTTCCCTCCCTAATAGCAATTTATTTTCATCAGATAATGTCTCAAAAGGAGGCTCATTATTTGATGACTTTTTCGAGGAAGCAACGAAAATACAAACGATACTTTTTTTCTTCTTTAAATCTCATATTTAATAAAAAAAAATCAGCAAATATTTCTTATTAGATTAGTAAA

mRNA sequence

ATGGTGAACCAAAGGCAAAGACTTGCTCGGAAAAAGTACAAAGAAGAGCACCCAGAACTTTTCCCGAAAGCAGAGCCAACGCCACCGAAAGACCCGGACAAGAAGAAGAAGAAGAGTAAATTCAAGCGCAAAAAGGAAGAATCGAACTCAAACAGAGACCCAACTAAACCCCACAAAAAGGGTTTTAAGAAACACCCTCTTAGAGTACCTGGGATGAAGCCTGGAGAAAGCTGCTTCATCTGCAAAGCTAATGACCACATTGCTAAGCTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTGCTTTGCCGGAGACGAGGGCACAGTCTCAAGAATTGTCCAGACAAAAATGAAGGGACCGTGGACAAGAAGTTATGCTATAACTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCCCTTCAAGATGGGGGAACTAAATTCGCCAGTTGTTTTATTTGTAATGAAAGTGGACACTTAAGCAAGAATTGTCCGAAGAATACTCACGGGATCTACCCTAAGGGTGGTTGTTGTAAAACTTGTGGAGAAGTCACACATTTAGCTAAGGATTGTCCAAAGAAAGGAACCCAAGTGTTTGATAGGGCTGGTGTATTTGGTTACAGATCATCTGGATACGTGGAAATGCCAAGACGACCAGAGACGAAGCTAATCAGTGGTGATGATCTTGAGGATGACTTCATGATTGATGAAGGTAGTTTGCAGATCAAAGATGCAAAAATGGGAAAGAAAAAGGGTCCTAAAGTTGTGAAGTTCATGGACTGA

Coding sequence (CDS)

ATGGTGAACCAAAGGCAAAGACTTGCTCGGAAAAAGTACAAAGAAGAGCACCCAGAACTTTTCCCGAAAGCAGAGCCAACGCCACCGAAAGACCCGGACAAGAAGAAGAAGAAGAGTAAATTCAAGCGCAAAAAGGAAGAATCGAACTCAAACAGAGACCCAACTAAACCCCACAAAAAGGGTTTTAAGAAACACCCTCTTAGAGTACCTGGGATGAAGCCTGGAGAAAGCTGCTTCATCTGCAAAGCTAATGACCACATTGCTAAGCTTTGCCCTGAAAAGGCTCAATGGGAGAAGAACAAGATATGCTTGCTTTGCCGGAGACGAGGGCACAGTCTCAAGAATTGTCCAGACAAAAATGAAGGGACCGTGGACAAGAAGTTATGCTATAACTGTGGTGAAACAGGACATTCACTAGCTAATTGTCCACAACCCCTTCAAGATGGGGGAACTAAATTCGCCAGTTGTTTTATTTGTAATGAAAGTGGACACTTAAGCAAGAATTGTCCGAAGAATACTCACGGGATCTACCCTAAGGGTGGTTGTTGTAAAACTTGTGGAGAAGTCACACATTTAGCTAAGGATTGTCCAAAGAAAGGAACCCAAGTGTTTGATAGGGCTGGTGTATTTGGTTACAGATCATCTGGATACGTGGAAATGCCAAGACGACCAGAGACGAAGCTAATCAGTGGTGATGATCTTGAGGATGACTTCATGATTGATGAAGGTAGTTTGCAGATCAAAGATGCAAAAATGGGAAAGAAAAAGGGTCCTAAAGTTGTGAAGTTCATGGACTGA

Protein sequence

MVNQRQRLARKKYKEEHPELFPKAEPTPPKDPDKKKKKSKFKRKKEESNSNRDPTKPHKKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKNEGTVDKKLCYNCGETGHSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLAKDCPKKGTQVFDRAGVFGYRSSGYVEMPRRPETKLISGDDLEDDFMIDEGSLQIKDAKMGKKKGPKVVKFMD
Homology
[Close]
BLAST of CsaV3_3G017130 vs. NCBI nr
Match: KGN57377.1 (hypothetical protein Csa_3G182130 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 3.4e-65
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60
           MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX 120
           GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240

Query: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 266
           DEGSLQIKDAKMGKKKGPKVVKFMD
Sbjct: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]
BLAST of CsaV3_3G017130 vs. NCBI nr
Match: XP_011652775.1 (PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 3.4e-65
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60
           MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX 120
           GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240

Query: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 266
           DEGSLQIKDAKMGKKKGPKVVKFMD
Sbjct: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]
BLAST of CsaV3_3G017130 vs. NCBI nr
Match: XP_022945772.1 (uncharacterized protein LOC111449917 [Cucurbita moschata])

HSP 1 Score: 177.9 bits (450), Expect = 4.4e-41
Identity = 187/212 (88.21%), Postives = 192/212 (90.57%), Query Frame = 0 

Query: 54  PTKPHKKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXX 113
           P KPHKKGFKKHPLRVPGMKPGESCFICKA DHIAK CPEKAQWEK XXXXXXXXXXXXX
Sbjct: 58  PIKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKFCPEKAQWEKXXXXXXXXXXXXXX 117

Query: 114 XXXXXXXEGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXX 173
           XXXXXXX  TVDXXXXXXXXXXXXXXXXXXX  Q GGTKF  XXXXXXXXXXXXXXXXXX
Sbjct: 118 XXXXXXXXDTVDXXXXXXXXXXXXXXXXXXXXXQHGGTKFANXXXXXXXXXXXXXXXXXX 177

Query: 174 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDD 233
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      G RSSGYVEM RRPETKL+SGDD
Sbjct: 178 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPGASGNRSSGYVEMSRRPETKLVSGDD 237

Query: 234 LEDDFMIDEGSLQIKDAKMGKKKGPKVVKFMD 266
           LEDDFM++E +LQIKDAK+GKKKGPKVVKFMD
Sbjct: 238 LEDDFMVEEDNLQIKDAKLGKKKGPKVVKFMD 269

[Close]
BLAST of CsaV3_3G017130 vs. NCBI nr
Match: XP_022985102.1 (uncharacterized protein LOC111483178 [Cucurbita maxima])

HSP 1 Score: 171.8 bits (434), Expect = 3.2e-39
Identity = 221/267 (82.77%), Postives = 230/267 (86.14%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHP--ELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPH 60
           MV+QRQRLARKKY+EEHP          XXXXXXXXXXXXXXXXXXXXXXXXXXX   PH
Sbjct: 1   MVSQRQRLARKKYREEHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPH 60

Query: 61  KKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXX 120
           KK FKKHPLRV GMKPGESCFICKA DHIAKLCPEKAQWEK XXXXXXXXXXXXXXXXXX
Sbjct: 61  KKSFKKHPLRVTGMKPGESCFICKAKDHIAKLCPEKAQWEKXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXEGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXE TVDXXXXXXXXXXXXXXXXXXXPLQDGGTKF  XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXERTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKF-AXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDF 240
           XXXXXXXXXXXXXXXXXXXXXX          G +SSGYVEM RRPET+ +SGDDLEDDF
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXATQFSGGAYDGNKSSGYVEMHRRPETRRVSGDDLEDDF 240

Query: 241 MIDEGSLQIKDAKMGKKKGPKVVKFMD 266
            IDE  LQ+KDAK+ KKKGP+VV+FMD
Sbjct: 241 NIDEDHLQMKDAKVEKKKGPRVVQFMD 266

[Close]
BLAST of CsaV3_3G017130 vs. NCBI nr
Match: XP_008439227.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-37
Identity = 218/242 (90.08%), Postives = 223/242 (92.15%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60
           MV+QRQRLARKKY+E HPELFPKAEP XXXXXXXXXXXXXXXXXXXXXXXXXX    HKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX 120
           GFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQWEK XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            GT+DXXXXXXXXXXXXXXXXXXXPLQDGGTKF XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XGTMDXXXXXXXXXXXXXXXXXXXPLQDGGTKFAXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           XXXXXXXXXXXXXXXXXXXXXXXX         +SGYVEMPRRPETKL+SGDDLEDDFMI
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXDR------AASGYVEMPRRPETKLVSGDDLEDDFMI 235

Query: 241 DE 243
           DE
Sbjct: 241 DE 235

[Close]
BLAST of CsaV3_3G017130 vs. TAIR10
Match: AT5G52380.1 (VASCULAR-RELATED NAC-DOMAIN 6)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19
Identity = 71/100 (71.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60
           MVNQR+RLA+K+YKE +PELFPKAEP     XXXXXXXXXXXXXXXXXXXXXX       
Sbjct: 1   MVNQRRRLAQKRYKEANPELFPKAEP--TPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKN 101
               HPLRVPGMKPGE CFIC +  HIAKLCPEK++WE+N
Sbjct: 61  XXXXHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERN 98

[Close]
BLAST of CsaV3_3G017130 vs. TrEMBL
Match: tr|A0A0A0L9S9|A0A0A0L9S9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182130 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60
           MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK
Sbjct: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX 120
           GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240

Query: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 266
           DEGSLQIKDAKMGKKKGPKVVKFMD
Sbjct: 241 DEGSLQIKDAKMGKKKGPKVVKFMD 265

[Close]
BLAST of CsaV3_3G017130 vs. TrEMBL
Match: tr|A0A1S3AY90|A0A1S3AY90_CUCME (LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=3656 GN=LOC103484078 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.0e-37
Identity = 218/242 (90.08%), Postives = 223/242 (92.15%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60
           MV+QRQRLARKKY+E HPELFPKAEP XXXXXXXXXXXXXXXXXXXXXXXXXX    HKK
Sbjct: 1   MVSQRQRLARKKYREGHPELFPKAEP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKK 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX 120
           GFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQWEK XXXXXXXXXXXXXXXXXXXX
Sbjct: 61  GFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            GT+DXXXXXXXXXXXXXXXXXXXPLQDGGTKF XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XGTMDXXXXXXXXXXXXXXXXXXXPLQDGGTKFAXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           XXXXXXXXXXXXXXXXXXXXXXXX         +SGYVEMPRRPETKL+SGDDLEDDFMI
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXDR------AASGYVEMPRRPETKLVSGDDLEDDFMI 235

Query: 241 DE 243
           DE
Sbjct: 241 DE 235

[Close]
BLAST of CsaV3_3G017130 vs. TrEMBL
Match: tr|A0A2C9UHW5|A0A2C9UHW5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G025600 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.4e-27
Identity = 195/274 (71.17%), Postives = 209/274 (76.28%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHPELFPKAE--PXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPH 60
           MV+QRQR ARK+YKE HPELF K E  P   XXXXXXXXXXXXXXXXX       P  P+
Sbjct: 1   MVSQRQRFARKRYKEAHPELFTKPEHTPPKDXXXXXXXXXXXXXXXXXDYKEPKDPNGPN 60

Query: 61  KKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXX 120
           KKGFKKHPLRVPGMKPGESCFICKA DHIAKLCP+KA+WEKNXXXXXXXXXXXXXXXXXX
Sbjct: 61  KKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPQKAEWEKNXXXXXXXXXXXXXXXXXX 120

Query: 121 XXEGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XX  TV XXXXXXXXXXXXXXXXXXXPLQDGGT+F     XXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXETVXXXXXXXXXXXXXXXXXXXXPLQDGGTRF---ANXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDF 240
           XXXXXXXXXXXXXXXXXXXXXXXX        G  +    E P    TK +SGD+L+DDF
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXGKRGSLATGKEAFEQGERPTPKLTKFVSGDELDDDF 240

Query: 241 MIDEGSL-------QIKD--AKMGKKKGPKVVKF 264
           M +  ++         KD  AK  KK+G KVV F
Sbjct: 241 MTENSNVIQQEKPSDSKDTQAKSKKKQGHKVVNF 271

[Close]
BLAST of CsaV3_3G017130 vs. TrEMBL
Match: tr|A0A2I4F9W1|A0A2I4F9W1_9ROSI (DNA-binding protein HEXBP isoform X1 OS=Juglans regia OX=51240 GN=LOC108996846 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 7.0e-27
Identity = 190/283 (67.14%), Postives = 204/283 (72.08%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHPELFPK--AEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPH 60
           MV+QRQRLARKKY+E HP+LFPK     XXXXXXXXXXXXXX             P KP 
Sbjct: 1   MVSQRQRLARKKYREAHPDLFPKXXXXXXXXXXXXXXXXXXXFKRKKADSKAPRDPNKPV 60

Query: 61  KKGFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXX 120
           + GFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKA+WEKNXXXXXXXXXXXXXXXXXX
Sbjct: 61  RMGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAEWEKNXXXXXXXXXXXXXXXXXX 120

Query: 121 XXEGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXX 180
           X   TVDXXXXXXXXXXXXXXXXXX PL++GGTKF  XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XNGTTVDXXXXXXXXXXXXXXXXXXQPLREGGTKFANXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDF 240
           XXXXXXXXXXXXXXXXXXXXX           G  S    E PR   TK +SGDD+EDDF
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXGSVAARGP---GNTSVVKDERPRGRVTKFVSGDDIEDDF 240

Query: 241 MIDEGSLQIKD-----------------AKMGKKKGPKVVKFM 265
           + D  +   KD                  K  KK+ PK+V F+
Sbjct: 241 LTDGTNSGNKDKSSESKVSSASGSKESNVKPKKKQEPKIVNFV 280

[Close]
BLAST of CsaV3_3G017130 vs. TrEMBL
Match: tr|A0A1Q3D772|A0A1Q3D772_CEPFO (Zf-CCHC domain-containing protein/Cofilin_ADF domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31733 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 7.0e-27
Identity = 187/274 (68.25%), Postives = 204/274 (74.45%), Query Frame = 0 

Query: 1   MVNQRQRLARKKYKEEHPELFPKAEPXXXXXXXXXXXXXXXXXXXXXXXXXXXPTKPHKK 60
           MV++RQ+LARK+Y++EHPELFPK EP        XXXXXXXXXXXXXX     P KP K 
Sbjct: 1   MVSERQKLARKRYRKEHPELFPKQEP---TPPKDXXXXXXXXXXXXXXTHSSDPNKPIKG 60

Query: 61  GFKKHPLRVPGMKPGESCFICKANDHIAKLCPEKAQWEKNXXXXXXXXXXXXXXXXXXXX 120
           GF+KHPLRVPGMKPGE+CFICKA DHIAK CPEKAQW   XXXXXXXXXXXXXXXXXXX 
Sbjct: 61  GFRKHPLRVPGMKPGETCFICKAKDHIAKHCPEKAQWXXXXXXXXXXXXXXXXXXXXXXN 120

Query: 121 EGTVDXXXXXXXXXXXXXXXXXXXPLQDGGTKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           + T+DXXXXXXXXXXXXXXXXXXXPLQDGGTKF XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 DETMDXXXXXXXXXXXXXXXXXXXPLQDGGTKFAXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGYRSSGYVEMPRRPETKLISGDDLEDDFMI 240
           XXXXXXXXXXXXXXXXXX             Y +    E PR   TK  SGDDLEDDF+I
Sbjct: 181 XXXXXXXXXXXXXXXXXXKGIQGFVVDNKRAYENE---ERPRGKVTKFTSGDDLEDDFII 240

Query: 241 DEGSLQIKD--------------AKMGKKKGPKV 261
           ++ +   KD               +  KK+GPKV
Sbjct: 241 EDVNSSKKDKPKVLSTHGSKDGHVESKKKQGPKV 268

The following BLAST results are available for this feature:
BLAST of CsaV3_3G017130 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57377.13.4e-65100.00hypothetical protein Csa_3G182130 [Cucumis sativus][more]
XP_011652775.13.4e-65100.00PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus][more]
XP_022945772.14.4e-4188.21uncharacterized protein LOC111449917 [Cucurbita moschata][more]
XP_022985102.13.2e-3982.77uncharacterized protein LOC111483178 [Cucurbita maxima][more]
XP_008439227.13.0e-3790.08PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis me... [more]
BLAST of CsaV3_3G017130 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52380.11.2e-1971.00VASCULAR-RELATED NAC-DOMAIN 6[more]
BLAST of CsaV3_3G017130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G017130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9S9|A0A0A0L9S9_CUCSA2.2e-65100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182130 PE=4 SV=1[more]
tr|A0A1S3AY90|A0A1S3AY90_CUCME2.0e-3790.08LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=365... [more]
tr|A0A2C9UHW5|A0A2C9UHW5_MANES1.4e-2771.17Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G025600 PE=4 SV=... [more]
tr|A0A2I4F9W1|A0A2I4F9W1_9ROSI7.0e-2767.14DNA-binding protein HEXBP isoform X1 OS=Juglans regia OX=51240 GN=LOC108996846 P... [more]
tr|A0A1Q3D772|A0A1Q3D772_CEPFO7.0e-2768.25Zf-CCHC domain-containing protein/Cofilin_ADF domain-containing protein OS=Cepha... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf
IPR025836Zn_knuckle_CX2CX4HX4C
IPR001878Znf_CCHC
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030042 actin filament depolymerization
biological_process GO:0009560 embryo sac egg cell differentiation
cellular_component GO:0005575 cellular_component
cellular_component GO:0015629 actin cytoskeleton
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003779 actin binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G017130.1CsaV3_3G017130.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 182..198
e-value: 0.019
score: 21.8
coord: 128..144
e-value: 2.1E-4
score: 30.6
coord: 102..118
e-value: 0.33
score: 14.2
coord: 155..171
e-value: 9.1E-4
score: 28.5
coord: 77..93
e-value: 0.057
score: 18.9
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 128..144
e-value: 4.4E-6
score: 26.4
coord: 156..171
e-value: 2.9E-5
score: 23.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 183..198
score: 9.026
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 129..144
score: 10.263
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 156..171
score: 9.883
NoneNo IPR availableGENE3DG3DSA:4.10.60.10coord: 73..124
e-value: 1.8E-9
score: 39.3
coord: 154..208
e-value: 1.2E-11
score: 46.3
NoneNo IPR availableGENE3DG3DSA:4.10.60.10coord: 125..152
e-value: 1.3E-5
score: 26.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69
NoneNo IPR availablePANTHERPTHR23002:SF48ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 9coord: 1..221
NoneNo IPR availablePANTHERPTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINcoord: 1..221
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 101..117
e-value: 0.014
score: 15.1
coord: 182..198
e-value: 1.4
score: 8.7
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILYSSF57756Retrovirus zinc finger-like domainscoord: 71..120
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILYSSF57756Retrovirus zinc finger-like domainscoord: 122..173

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G017130CSPI03G16960Wild cucumber (PI 183967)cpicucB144
CsaV3_3G017130CmaCh16G001240Cucurbita maxima (Rimu)cmacucB0383
CsaV3_3G017130Cp4.1LG09g00860Cucurbita pepo (Zucchini)cpecucB0039
CsaV3_3G017130CsGy3G017040Cucumber (Gy14) v2cgybcucB117
CsaV3_3G017130Carg22103Silver-seed gourdcarcucB0774
CsaV3_3G017130Cla006176Watermelon (97103) v1cucwmB239
CsaV3_3G017130MELO3C006911Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G017130ClCG05G008070Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G017130Lsi05G012240Bottle gourd (USVL1VR-Ls)cuclsiB229
CsaV3_3G017130MELO3C006911.2Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G017130Cla97C05G090120Watermelon (97103) v2cucwmbB206
CsaV3_3G017130Bhi01G000955Wax gourdcucwgoB290
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G017130Cucumber (Chinese Long) v3cuccucB125
CsaV3_3G017130Silver-seed gourdcarcucB0748
CsaV3_3G017130Silver-seed gourdcarcucB1032
CsaV3_3G017130Cucumber (Gy14) v2cgybcucB215
CsaV3_3G017130Cucumber (Gy14) v2cgybcucB216
CsaV3_3G017130Cucumber (Gy14) v1cgycucB137
CsaV3_3G017130Cucumber (Gy14) v1cgycucB182
CsaV3_3G017130Cucumber (Gy14) v1cgycucB466
CsaV3_3G017130Cucurbita maxima (Rimu)cmacucB0487
CsaV3_3G017130Cucurbita maxima (Rimu)cmacucB0711
CsaV3_3G017130Cucurbita moschata (Rifu)cmocucB0282
CsaV3_3G017130Cucurbita moschata (Rifu)cmocucB0379
CsaV3_3G017130Cucurbita moschata (Rifu)cmocucB0476
CsaV3_3G017130Cucurbita moschata (Rifu)cmocucB0697
CsaV3_3G017130Cucurbita moschata (Rifu)cmocucB1041
CsaV3_3G017130Cucurbita pepo (Zucchini)cpecucB0200
CsaV3_3G017130Cucurbita pepo (Zucchini)cpecucB0257
CsaV3_3G017130Cucurbita pepo (Zucchini)cpecucB0384
CsaV3_3G017130Cucurbita pepo (Zucchini)cpecucB0896
CsaV3_3G017130Cucurbita pepo (Zucchini)cpecucB0903
CsaV3_3G017130Wild cucumber (PI 183967)cpicucB267
CsaV3_3G017130Bottle gourd (USVL1VR-Ls)cuclsiB169
CsaV3_3G017130Bottle gourd (USVL1VR-Ls)cuclsiB227
CsaV3_3G017130Watermelon (97103) v2cucwmbB227