CsGy3G017030 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G017030
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionActin-depolymerizing factor 7
LocationChr3 : 13053650 .. 13054507 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTAAGGGATGAATGCAAGCTGAAATTTTTGGAGTTAAAAACCAAGAGAAACTATCGGTTCATTATATTCAAGATTGAGAATCAAGAAGTTGTTGTGGAGAAACTCGGAAGCCCTGAAGAGACTTATGATGATTTCTCTGCCGCTATTCCTGCTAATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCACTACCGATGAGAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGTAAACTTCCAATTTTTTTTCTCTCTATCTAATACATCATTTACATTCCCTTAATCTATGTTTCTATCAAAAACTTGCATTCTACTGTTACCTTTAATATTTCACAAGCATTTCAAAACTAGGCTTGAAATACAATCTGTTGGAATGTTTGATAAAAATCGAGATTTGAACACGGGAACGCACAGTTTGACAGGTGGAGGAATTTCTACCCAAAGGATAGTTTTGAAACAGTAACGAAACATCAAAAGTAATACAACTTTTACTAGAACAAGAAGTTTATGATATTCTAACAAACATTATTCACAACATTATTACTTGATTTCCTCCTGGGAAATGTAAGGAGAGAACTTCAACATACTTCGGTAAAACTTCTTCTCAATCAAATTTTGTAGCATAAACTTAACCTTAAACTTGAAGACAAACACATGAACTATGGTTATCTATGATGTCTCTGTTAATTTGAAGGTCCCCTGACACATCAAAAGTGAGAAATAAGATGGTTTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTACAAGCCACAGATCCTAGCGAAATGAGCTTCGACATAATCAAGGCTCGAGCATTTTAA

mRNA sequence

ATGGCTGTAAGGGATGAATGCAAGCTGAAATTTTTGGAGTTAAAAACCAAGAGAAACTATCGGTTCATTATATTCAAGATTGAGAATCAAGAAGTTGTTGTGGAGAAACTCGGAAGCCCTGAAGAGACTTATGATGATTTCTCTGCCGCTATTCCTGCTAATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCACTACCGATGAGAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGTCCCCTGACACATCAAAAGTGAGAAATAAGATGGTTTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTACAAGCCACAGATCCTAGCGAAATGAGCTTCGACATAATCAAGGCTCGAGCATTTTAA

Coding sequence (CDS)

ATGGCTGTAAGGGATGAATGCAAGCTGAAATTTTTGGAGTTAAAAACCAAGAGAAACTATCGGTTCATTATATTCAAGATTGAGAATCAAGAAGTTGTTGTGGAGAAACTCGGAAGCCCTGAAGAGACTTATGATGATTTCTCTGCCGCTATTCCTGCTAATGAGTGTCGCTATGCTGTCTTTGATTTTGATTTCACTACCGATGAGAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGTCCCCTGACACATCAAAAGTGAGAAATAAGATGGTTTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTACAAGCCACAGATCCTAGCGAAATGAGCTTCGACATAATCAAGGCTCGAGCATTTTAA

Protein sequence

MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAF
Homology
[Close]
BLAST of CsGy3G017030 vs. NCBI nr
Match: KGN57376.1 (hypothetical protein Csa_3G182120 [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 8.7e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV
Sbjct: 8   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 67

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 68  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 127

Query: 121 SFDIIKARAF 131
           SFDIIKARAF
Sbjct: 128 SFDIIKARAF 137

[Close]
BLAST of CsGy3G017030 vs. NCBI nr
Match: XP_011652775.1 (PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus])

HSP 1 Score: 262.3 bits (669), Expect = 8.7e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV
Sbjct: 300 MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 359

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 360 FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 419

Query: 121 SFDIIKARAF 131
           SFDIIKARAF
Sbjct: 420 SFDIIKARAF 429

[Close]
BLAST of CsGy3G017030 vs. NCBI nr
Match: XP_008439227.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis melo])

HSP 1 Score: 259.2 bits (661), Expect = 7.4e-66
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSPEETYDDF+AAIPANECRYAV
Sbjct: 257 MAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAV 316

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 317 FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 376

Query: 121 SFDIIKARAF 131
           SFDIIKARAF
Sbjct: 377 SFDIIKARAF 386

[Close]
BLAST of CsGy3G017030 vs. NCBI nr
Match: XP_022141136.1 (uncharacterized protein LOC111011601 [Momordica charantia])

HSP 1 Score: 251.9 bits (642), Expect = 1.2e-63
Identity = 123/130 (94.62%), Postives = 128/130 (98.46%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAVRDECKLKF+ELK KRNYRFIIFKIENQEVVVEKLGSPEETY+DF+AAIP +ECRYAV
Sbjct: 347 MAVRDECKLKFMELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPPDECRYAV 406

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTTDENCQKSKIFFIAWSPDTS+VRNKMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 407 FDFDFTTDENCQKSKIFFIAWSPDTSRVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 466

Query: 121 SFDIIKARAF 131
           SFDIIKARAF
Sbjct: 467 SFDIIKARAF 476

[Close]
BLAST of CsGy3G017030 vs. NCBI nr
Match: XP_022945772.1 (uncharacterized protein LOC111449917 [Cucurbita moschata])

HSP 1 Score: 250.8 bits (639), Expect = 2.6e-63
Identity = 125/130 (96.15%), Postives = 126/130 (96.92%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSP ETYDDF+AAIP NECRYAV
Sbjct: 357 MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPPNECRYAV 416

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDRFKRELDGIQVELQATD SEM
Sbjct: 417 FDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDASEM 476

Query: 121 SFDIIKARAF 131
           SFDIIKARAF
Sbjct: 477 SFDIIKARAF 486

[Close]
BLAST of CsGy3G017030 vs. TAIR10
Match: AT4G25590.1 (actin depolymerizing factor 7)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-62
Identity = 113/129 (87.60%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P+ETYDDF+A++PANECRYAV
Sbjct: 8   MAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPANECRYAV 67

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDF TDENCQKSKIFFIAWSPD+S+VR KMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 68  FDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEM 127

Query: 121 SFDIIKARA 130
           SFDIIK+RA
Sbjct: 128 SFDIIKSRA 136

[Close]
BLAST of CsGy3G017030 vs. TAIR10
Match: AT5G52360.1 (actin depolymerizing factor 10)

HSP 1 Score: 221.5 bits (563), Expect = 3.1e-58
Identity = 108/129 (83.72%), Postives = 118/129 (91.47%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP+E YDDF+  +P NECRYAV
Sbjct: 8   MAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPPNECRYAV 67

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           +DFDFTT EN QKSKIFFIAWSPD+S+VR KMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 68  YDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEM 127

Query: 121 SFDIIKARA 130
           S DIIK+RA
Sbjct: 128 SLDIIKSRA 136

[Close]
BLAST of CsGy3G017030 vs. TAIR10
Match: AT1G01750.1 (actin depolymerizing factor 11)

HSP 1 Score: 215.3 bits (547), Expect = 2.2e-56
Identity = 103/130 (79.23%), Postives = 119/130 (91.54%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFSAAIPANECRY 60
           M V DECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG+PEETY+DF+ +IP +ECRY
Sbjct: 8   MHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRY 67

Query: 61  AVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPS 120
           AV+D+DFTT ENCQKSKIFFIAWSPDTS+VR+KM+YASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKAR 129
           EMS DIIK R
Sbjct: 128 EMSLDIIKGR 137

[Close]
BLAST of CsGy3G017030 vs. TAIR10
Match: AT4G00680.1 (actin depolymerizing factor 8)

HSP 1 Score: 213.4 bits (542), Expect = 8.4e-56
Identity = 101/130 (77.69%), Postives = 119/130 (91.54%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFSAAIPANECRY 60
           M V DECK+KFLELK KR YRFI+FKI+   Q+V +EKLG+PEETYDDF+++IP +ECRY
Sbjct: 8   MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRY 67

Query: 61  AVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPS 120
           AV+DFDFTT++NCQKSKIFFIAWSPDTS+VR+KM+YASSKDRFKRE++GIQVELQATDPS
Sbjct: 68  AVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPS 127

Query: 121 EMSFDIIKAR 129
           EMS DIIK R
Sbjct: 128 EMSLDIIKGR 137

[Close]
BLAST of CsGy3G017030 vs. TAIR10
Match: AT3G46000.1 (actin depolymerizing factor 2)

HSP 1 Score: 209.1 bits (531), Expect = 1.6e-54
Identity = 93/128 (72.66%), Postives = 117/128 (91.41%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAV D+CKLKF+ELK KR +R I++KIE+++V+VEKLG PE++YDDF+A++PA++CRY +
Sbjct: 8   MAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPADDCRYCI 67

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           +DFDF T ENCQKSKIFFIAWSPDT+KVR+KM+YASSKDRFKRELDGIQVELQATDP+EM
Sbjct: 68  YDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEM 127

Query: 121 SFDIIKAR 129
             D+ K+R
Sbjct: 128 GLDVFKSR 135

[Close]
BLAST of CsGy3G017030 vs. Swiss-Prot
Match: sp|Q67ZM4|ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.2e-61
Identity = 113/129 (87.60%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P+ETYDDF+A++PANECRYAV
Sbjct: 8   MAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPANECRYAV 67

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDF TDENCQKSKIFFIAWSPD+S+VR KMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 68  FDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEM 127

Query: 121 SFDIIKARA 130
           SFDIIK+RA
Sbjct: 128 SFDIIKSRA 136

[Close]
BLAST of CsGy3G017030 vs. Swiss-Prot
Match: sp|Q8LFH6|ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 5.6e-57
Identity = 108/129 (83.72%), Postives = 118/129 (91.47%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP+E YDDF+  +P NECRYAV
Sbjct: 8   MAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPPNECRYAV 67

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           +DFDFTT EN QKSKIFFIAWSPD+S+VR KMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 68  YDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEM 127

Query: 121 SFDIIKARA 130
           S DIIK+RA
Sbjct: 128 SLDIIKSRA 136

[Close]
BLAST of CsGy3G017030 vs. Swiss-Prot
Match: sp|P30175|ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.5e-57
Identity = 106/132 (80.30%), Postives = 119/132 (90.15%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPEETYDDFSAAIPANECRY 60
           MAV DECKLKF+ELK KRN+RFI+FKIE   Q+V VE+LG P E+YDDF+  +P NECRY
Sbjct: 8   MAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRY 67

Query: 61  AVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPS 120
           AVFDFDF TDENCQKSKIFFI+WSPDTS+VR+KM+YAS+KDRFKRELDGIQVELQATDPS
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKARAF 131
           EMS DIIKARAF
Sbjct: 128 EMSMDIIKARAF 139

[Close]
BLAST of CsGy3G017030 vs. Swiss-Prot
Match: sp|P30174|ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-55
Identity = 106/125 (84.80%), Postives = 120/125 (96.00%), Query Frame = 0 

Query: 5   DECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAVFDFD 64
           D CKLKFLELK KR +RFIIF+I+ Q+VVVEKLG+P+ETYDDF+A++PA+ECRYAVFDFD
Sbjct: 2   DNCKLKFLELK-KRIFRFIIFRIDGQQVVVEKLGNPQETYDDFTASLPADECRYAVFDFD 61

Query: 65  FTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEMSFDI 124
           FTT+ENCQKSKIFFIAWSPD+S+VR KMVYASSKDRFKRELDGIQVELQATDPSEMSFDI
Sbjct: 62  FTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDI 121

Query: 125 IKARA 130
           IK+RA
Sbjct: 122 IKSRA 125

[Close]
BLAST of CsGy3G017030 vs. Swiss-Prot
Match: sp|Q7XSN9|ADF6_ORYSJ (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 PE=2 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-55
Identity = 105/131 (80.15%), Postives = 121/131 (92.37%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIE--NQEVVVEKLGSPEETYDDFSAAIPANECRY 60
           MAV DECKLKF ELK+KR++RFI FKI+   Q+VVV++LG P +TYDDF+A++PA+ECRY
Sbjct: 8   MAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMPASECRY 67

Query: 61  AVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPS 120
           AVFDFDF TDENCQKSKIFFI+WSPDTSKVR+KM+YASSKDRFKRELDGIQVELQATDPS
Sbjct: 68  AVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVELQATDPS 127

Query: 121 EMSFDIIKARA 130
           EMS DI+KARA
Sbjct: 128 EMSMDIVKARA 138

[Close]
BLAST of CsGy3G017030 vs. TrEMBL
Match: tr|A0A0A0LBE8|A0A0A0LBE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182120 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.7e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV
Sbjct: 8   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 67

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 68  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 127

Query: 121 SFDIIKARAF 131
           SFDIIKARAF
Sbjct: 128 SFDIIKARAF 137

[Close]
BLAST of CsGy3G017030 vs. TrEMBL
Match: tr|A0A1S3AY90|A0A1S3AY90_CUCME (LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=3656 GN=LOC103484078 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.9e-66
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSPEETYDDF+AAIPANECRYAV
Sbjct: 257 MAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPANECRYAV 316

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM
Sbjct: 317 FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 376

Query: 121 SFDIIKARAF 131
           SFDIIKARAF
Sbjct: 377 SFDIIKARAF 386

[Close]
BLAST of CsGy3G017030 vs. TrEMBL
Match: tr|I1NGT6|I1NGT6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_10G235500 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-61
Identity = 119/129 (92.25%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAV DECKLKFLELK KRNYRFI+FKIEN EVVVEKLGSPEETYDDFSA++PANECRYAV
Sbjct: 8   MAVIDECKLKFLELKAKRNYRFIVFKIENYEVVVEKLGSPEETYDDFSASLPANECRYAV 67

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTT+ENCQKSKIFFIAW+PDTSKVR KMVYASSKD+FKRELDGIQVELQATDPSEM
Sbjct: 68  FDFDFTTNENCQKSKIFFIAWAPDTSKVREKMVYASSKDKFKRELDGIQVELQATDPSEM 127

Query: 121 SFDIIKARA 130
           SFDIIKARA
Sbjct: 128 SFDIIKARA 136

[Close]
BLAST of CsGy3G017030 vs. TrEMBL
Match: tr|A0A0B2QPG0|A0A0B2QPG0_GLYSO (Actin-depolymerizing factor 7 OS=Glycine soja OX=3848 GN=glysoja_027627 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-61
Identity = 119/129 (92.25%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAV DECKLKFLELK KRNYRFI+FKIEN EVVVEKLGSPEETYDDFSA++PANECRYAV
Sbjct: 1   MAVIDECKLKFLELKAKRNYRFIVFKIENYEVVVEKLGSPEETYDDFSASLPANECRYAV 60

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTT+ENCQKSKIFFIAW+PDTSKVR KMVYASSKD+FKRELDGIQVELQATDPSEM
Sbjct: 61  FDFDFTTNENCQKSKIFFIAWAPDTSKVREKMVYASSKDKFKRELDGIQVELQATDPSEM 120

Query: 121 SFDIIKARA 130
           SFDIIKARA
Sbjct: 121 SFDIIKARA 129

[Close]
BLAST of CsGy3G017030 vs. TrEMBL
Match: tr|A0A0B2QYA4|A0A0B2QYA4_GLYSO (Actin-depolymerizing factor 7 (Fragment) OS=Glycine soja OX=3848 GN=glysoja_041475 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-61
Identity = 119/129 (92.25%), Postives = 125/129 (96.90%), Query Frame = 0 

Query: 1   MAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPANECRYAV 60
           MAV DECKLKFLELK KRNYRFI+FKIEN EVVVEKLGSPEETYDDFSA++PANECRYAV
Sbjct: 7   MAVIDECKLKFLELKAKRNYRFIVFKIENYEVVVEKLGSPEETYDDFSASLPANECRYAV 66

Query: 61  FDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQATDPSEM 120
           FDFDFTT+ENCQKSKIFFIAW+PDTSKVR KMVYASSKD+FKRELDGIQVELQATDPSEM
Sbjct: 67  FDFDFTTNENCQKSKIFFIAWAPDTSKVREKMVYASSKDKFKRELDGIQVELQATDPSEM 126

Query: 121 SFDIIKARA 130
           SFDIIKARA
Sbjct: 127 SFDIIKARA 135

The following BLAST results are available for this feature:
BLAST of CsGy3G017030 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57376.18.7e-67100.00hypothetical protein Csa_3G182120 [Cucumis sativus][more]
XP_011652775.18.7e-67100.00PREDICTED: zinc finger CCHC domain-containing protein 9 [Cucumis sativus][more]
XP_008439227.17.4e-6698.46PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 [Cucumis me... [more]
XP_022141136.11.2e-6394.62uncharacterized protein LOC111011601 [Momordica charantia][more]
XP_022945772.12.6e-6396.15uncharacterized protein LOC111449917 [Cucurbita moschata][more]
BLAST of CsGy3G017030 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25590.11.2e-6287.60actin depolymerizing factor 7[more]
AT5G52360.13.1e-5883.72actin depolymerizing factor 10[more]
AT1G01750.12.2e-5679.23actin depolymerizing factor 11[more]
AT4G00680.18.4e-5677.69actin depolymerizing factor 8[more]
AT3G46000.11.6e-5472.66actin depolymerizing factor 2[more]
BLAST of CsGy3G017030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q67ZM4|ADF7_ARATH2.2e-6187.60Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1[more]
sp|Q8LFH6|ADF12_ARATH5.6e-5783.72Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=... [more]
sp|P30175|ADF_LILLO9.5e-5780.30Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1[more]
sp|P30174|ADF_BRANA1.0e-5584.80Actin-depolymerizing factor (Fragment) OS=Brassica napus OX=3708 PE=2 SV=1[more]
sp|Q7XSN9|ADF6_ORYSJ1.8e-5580.15Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 P... [more]
BLAST of CsGy3G017030 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LBE8|A0A0A0LBE8_CUCSA5.7e-67100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182120 PE=3 SV=1[more]
tr|A0A1S3AY90|A0A1S3AY90_CUCME4.9e-6698.46LOW QUALITY PROTEIN: uncharacterized protein LOC103484078 OS=Cucumis melo OX=365... [more]
tr|I1NGT6|I1NGT6_SOYBN2.1e-6192.25Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_10G235500 PE=3 SV=1[more]
tr|A0A0B2QPG0|A0A0B2QPG0_GLYSO2.1e-6192.25Actin-depolymerizing factor 7 OS=Glycine soja OX=3848 GN=glysoja_027627 PE=3 SV=... [more]
tr|A0A0B2QYA4|A0A0B2QYA4_GLYSO2.1e-6192.25Actin-depolymerizing factor 7 (Fragment) OS=Glycine soja OX=3848 GN=glysoja_0414... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: INTERPRO
TermDefinition
IPR017904ADF/Cofilin
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR002108ADF-H
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G017030.1CsGy3G017030.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 5..130
e-value: 5.2E-57
score: 205.4
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 7..127
e-value: 2.1E-38
score: 131.2
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 1..130
score: 37.822
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3DG3DSA:3.40.20.10coord: 1..129
e-value: 3.2E-49
score: 168.0
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..129
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 1..129
e-value: 2.57349E-59
score: 180.831
NoneNo IPR availablePANTHERPTHR11913:SF33ACTIN-DEPOLYMERIZING FACTOR 12-RELATEDcoord: 1..129
NoneNo IPR availableSUPERFAMILYSSF55753Actin depolymerizing proteinscoord: 1..128

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G017030Cla006177Watermelon (97103) v1cgybwmB217
CsGy3G017030Csa3G182120Cucumber (Chinese Long) v2cgybcuB109
CsGy3G017030MELO3C006910Melon (DHL92) v3.5.1cgybmeB200
CsGy3G017030ClCG05G008060Watermelon (Charleston Gray)cgybwcgB203
CsGy3G017030CSPI03G16950Wild cucumber (PI 183967)cgybcpiB110
CsGy3G017030CmaCh16G001250Cucurbita maxima (Rimu)cgybcmaB342
CsGy3G017030CmaCh18G012480Cucurbita maxima (Rimu)cgybcmaB352
CsGy3G017030CmaCh02G010680Cucurbita maxima (Rimu)cgybcmaB394
CsGy3G017030CmoCh18G012710Cucurbita moschata (Rifu)cgybcmoB324
CsGy3G017030CmoCh16G001310Cucurbita moschata (Rifu)cgybcmoB312
CsGy3G017030Lsi05G012250Bottle gourd (USVL1VR-Ls)cgyblsiB197
CsGy3G017030Cp4.1LG14g06100Cucurbita pepo (Zucchini)cgybcpeB327
CsGy3G017030Cp4.1LG09g00850Cucurbita pepo (Zucchini)cgybcpeB287
CsGy3G017030CsaV3_3G017120Cucumber (Chinese Long) v3cgybcucB117
CsGy3G017030Cla97C05G082010Watermelon (97103) v2cgybwmbB216
CsGy3G017030Cla97C05G090110Watermelon (97103) v2cgybwmbB196
CsGy3G017030Bhi01G000263Wax gourdcgybwgoB288
CsGy3G017030Bhi01G000956Wax gourdcgybwgoB274
CsGy3G017030Carg22102Silver-seed gourdcarcgybB0733
CsGy3G017030Carg08410Silver-seed gourdcarcgybB0707
CsGy3G017030Carg15135Silver-seed gourdcarcgybB0976
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G017030Cucurbita moschata (Rifu)cgybcmoB432
CsGy3G017030Cucurbita pepo (Zucchini)cgybcpeB314
CsGy3G017030Cucurbita pepo (Zucchini)cgybcpeB427
CsGy3G017030Cucumber (Chinese Long) v2cgybcuB128
CsGy3G017030Melon (DHL92) v3.6.1cgybmedB201
CsGy3G017030Watermelon (Charleston Gray)cgybwcgB191
CsGy3G017030Watermelon (97103) v1cgybwmB246
CsGy3G017030Wild cucumber (PI 183967)cgybcpiB130
CsGy3G017030Cucumber (Chinese Long) v3cgybcucB135
CsGy3G017030Cucumber (Gy14) v2cgybcgybB091
CsGy3G017030Cucurbita maxima (Rimu)cgybcmaB463