CmoCh17G003430 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh17G003430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Multicellular trichome development C2H2 zinc finger transcription factor
Location	Cmo_Chr17 : 2077666 .. 2078025 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTGTTTGGTTATTCAGTGAACGCTAGTGCCGAACCCAGCTTGGGTGCGCCATGTGCGAACCACATCAAGAGATTCCAGTGCCAATTCTGCGGCCGTGAGTTCGCCAATTCTCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCTCCCTCGTAATTTTTTCACTCCCACGCCGCCGCCCTCCGCCGCCGGAAGATCTCCTCCGCCAAATTATGAAATGCCGGTGGAAGCGCCGCCCTCGGTTGGCGGCGGTGAAATTAACGGCGAAAATAATGGCGTTGATCTCCATCTCAGTCTCGCACCGTCCTCGACCAGGATCTTCTCTTAA

mRNA sequence

ATGAAGCTGTTTGGTTATTCAGTGAACGCTAGTGCCGAACCCAGCTTGGGTGCGCCATGTGCGAACCACATCAAGAGATTCCAGTGCCAATTCTGCGGCCGTGAGTTCGCCAATTCTCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCTCCCTCGTAATTTTTTCACTCCCACGCCGCCGCCCTCCGCCGCCGGAAGATCTCCTCCGCCAAATTATGAAATGCCGGTGGAAGCGCCGCCCTCGGTTGGCGGCGGTGAAATTAACGGCGAAAATAATGGCGTTGATCTCCATCTCAGTCTCGCACCGTCCTCGACCAGGATCTTCTCTTAA

Coding sequence (CDS)

ATGAAGCTGTTTGGTTATTCAGTGAACGCTAGTGCCGAACCCAGCTTGGGTGCGCCATGTGCGAACCACATCAAGAGATTCCAGTGCCAATTCTGCGGCCGTGAGTTCGCCAATTCTCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCTCCCTCGTAATTTTTTCACTCCCACGCCGCCGCCCTCCGCCGCCGGAAGATCTCCTCCGCCAAATTATGAAATGCCGGTGGAAGCGCCGCCCTCGGTTGGCGGCGGTGAAATTAACGGCGAAAATAATGGCGTTGATCTCCATCTCAGTCTCGCACCGTCCTCGACCAGGATCTTCTCTTAA

Homology

[Close]

BLAST of CmoCh17G003430 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.9e-13
Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = 1


Query: 1   MKLFGYSV-------NASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRER 60
           +KLFG ++       N S+EP  G+   +  ++++CQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 61  QLAKQL-------LPRNF-FTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGENNGVD 116
           QL K+        LPR+  F P   P  +  +P P+       PP               
Sbjct: 68  QLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHPPP--------------- 121

[Close]

BLAST of CmoCh17G003430 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-09
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 1


Query: 1  MKLFGYSVNA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAH 60
          +KLFG+ + +           S   S        +KR +CQ+CG+EFANSQALGGHQNAH
Sbjct: 23 IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

[Close]

BLAST of CmoCh17G003430 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.1e-09
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 1


Query: 22  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPN 81
           +H +RF+C +C R F  SQALGGHQNAHKRERQLAK+ +   F+ P   P +  R  P  
Sbjct: 86  SHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSSYFYHPDNNPYSY-RHYPSW 145

Query: 82  YEMPVEAPPSVGG 95
              P+ A  S GG
Sbjct: 146 TNGPLTAARSYGG 157

[Close]

BLAST of CmoCh17G003430 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-08
Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 1


Query: 1  MKLFGYSVNASAEPSLGAPCANHI----------KRFQCQFCGREFANSQALGGHQNAHK 59
          ++LFG+   AS E S      N            KRF+C +C R F  SQALGGHQNAHK
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHK 78

[Close]

BLAST of CmoCh17G003430 vs. Swiss-Prot
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 9.6e-08
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 1


Query: 22  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ 59
           N+ +RF+C +C R F  SQALGGHQNAHKRERQ AK+
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126

[Close]

BLAST of CmoCh17G003430 vs. TrEMBL
Match: A0A0A0KI02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.3e-39
Identity = 92/136 (67.65%), Postives = 102/136 (75.00%), Query Frame = 1


Query: 1   MKLFGYSVNASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQL 60
           MKLFG+SV AS   +     LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61

Query: 61  AKQLLP-------RNFFTPTPPPS-----AAGRSPPPNYEMPVEAPPS-VGGGEINGENN 119
           AKQLLP       RNF   TPP S     +AGR+PPP Y + V+A P+ VGGGE+N E+N
Sbjct: 62  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRESN 121

[Close]

BLAST of CmoCh17G003430 vs. TrEMBL
Match: F6H746_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-10
Identity = 62/170 (36.47%), Postives = 72/170 (42.35%), Query Frame = 1


Query: 1   MKLFGYSVNASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLL 60
           MKLFG+ V  + E  L       I++F+CQ+C REFANSQALGGHQNAHK+ERQ AK+  
Sbjct: 37  MKLFGFPVTEADEAPLTPSNDADIRKFECQYCRREFANSQALGGHQNAHKKERQRAKRAQ 96

Query: 61  -----PRNFFTPTP----------PPSAAGRSP---------------------PPNYEM 116
                 R F    P          P   AG S                      PP    
Sbjct: 97  FQTDHHRRFAAAVPILTAHAVRSGPFICAGGSSSMGSAARFRSSPECCVWSPGPPPMLPA 156

[Close]

BLAST of CmoCh17G003430 vs. TrEMBL
Match: D7KUY0_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475797 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.5e-10
Identity = 47/130 (36.15%), Postives = 66/130 (50.77%), Query Frame = 1


Query: 1   MKLFGYSV-------NASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRER 60
           +KLFG ++       N S+EP  G    +  ++++CQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8   LKLFGINLLETTSDTNRSSEPRSGPGTGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 61  QLAKQ--------LLPRNFFTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGENNGVD 116
           QL K+        L   + F P   P  +  +P P+       PP               
Sbjct: 68  QLLKRAQMLATRGLTRHHNFHPHTNPLLSAFAPLPHLLSQPHPPP--------------- 121

[Close]

BLAST of CmoCh17G003430 vs. TrEMBL
Match: B9HWW5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s15060g PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09
Identity = 59/160 (36.88%), Postives = 72/160 (45.00%), Query Frame = 1


Query: 1   MKLFGYSVNASAE--PSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ 60
           +KL G+SV    E  P+       +IK+F+CQ+C R FANSQALGGHQNAHKRERQ AK+
Sbjct: 21  LKLLGFSVKRYQEELPATTPFNIEYIKKFECQYCHRGFANSQALGGHQNAHKRERQRAKR 80

Query: 61  LL------PRNFFTPTPP--PSAAGRSPP----------------PNYEMPVEAPP---- 113
            L            P  P   + A RS P                  +E P ++P     
Sbjct: 81  ALYFFKDHQHQRIKPAGPIINAHAARSGPLICASGSRSIKAAAGVARFECPAQSPSLLML 140

[Close]

BLAST of CmoCh17G003430 vs. TrEMBL
Match: A0A067KMC9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13000 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09
Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 1


Query: 1   MKLFGYSV--------NASAEPSLGAPCAN-HIKRFQCQFCGREFANSQALGGHQNAHKR 60
           +KLFG+++        N S++   G+P ++   ++++CQ+C REFANSQALGGHQNAHK+
Sbjct: 20  LKLFGFNILENNTDNNNISSKSPSGSPESDTETRKYECQYCCREFANSQALGGHQNAHKK 79

Query: 61  ERQLAKQL---LPRNFFTPTPPPSA-AGRSPPPNYEMP---VEAPPSV 93
           ERQL K+      RNF     P S  +  SP P + +P   V APP +
Sbjct: 80  ERQLLKRAQIQASRNFAASYVPNSMFSNFSPLPPHLLPPAVVPAPPQL 127

[Close]

BLAST of CmoCh17G003430 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 74.3 bits (181), Expect = 5.6e-14
Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = 1


Query: 1   MKLFGYSV-------NASAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRER 60
           +KLFG ++       N S+EP  G+   +  ++++CQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 61  QLAKQL-------LPRNF-FTPTPPPSAAGRSPPPNYEMPVEAPPSVGGGEINGENNGVD 116
           QL K+        LPR+  F P   P  +  +P P+       PP               
Sbjct: 68  QLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHPPP--------------- 121

[Close]

BLAST of CmoCh17G003430 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 63.5 bits (153), Expect = 9.8e-11
Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 1


Query: 1  MKLFGYSVNA-----------SAEPSLGAPCANHIKRFQCQFCGREFANSQALGGHQNAH 60
          +KLFG+ + +           S   S        +KR +CQ+CG+EFANSQALGGHQNAH
Sbjct: 23 IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

[Close]

BLAST of CmoCh17G003430 vs. TAIR10
Match: AT3G58070.1 (AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-10
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 1


Query: 22  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQLLPRNFFTPTPPPSAAGRSPPPN 81
           +H +RF+C +C R F  SQALGGHQNAHKRERQLAK+ +   F+ P   P +  R  P  
Sbjct: 86  SHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSSYFYHPDNNPYSY-RHYPSW 145

Query: 82  YEMPVEAPPSVGG 95
              P+ A  S GG
Sbjct: 146 TNGPLTAARSYGG 157

[Close]

BLAST of CmoCh17G003430 vs. TAIR10
Match: AT5G06650.1 (AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09
Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 1


Query: 1  MKLFGYSVNASAEPSLGAPCANHI----------KRFQCQFCGREFANSQALGGHQNAHK 59
          ++LFG+   AS E S      N            KRF+C +C R F  SQALGGHQNAHK
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHK 78

[Close]

BLAST of CmoCh17G003430 vs. TAIR10
Match: AT2G41940.1 (AT2G41940.1 zinc finger protein 8)

HSP 1 Score: 57.8 bits (138), Expect = 5.4e-09
Identity = 25/37 (67.57%), Postives = 30/37 (81.08%), Query Frame = 1


Query: 22  NHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQ 59
           N+ +RF+C +C R F  SQALGGHQNAHKRERQ AK+
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126

[Close]

BLAST of CmoCh17G003430 vs. NCBI nr
Match: gi|449464754|ref|XP_004150094.1| (PREDICTED: zinc finger protein 6-like [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-38
Identity = 92/136 (67.65%), Postives = 102/136 (75.00%), Query Frame = 1


Query: 1   MKLFGYSVNASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQL 60
           MKLFG+SV AS   +     LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60

Query: 61  AKQLLP-------RNFFTPTPPPS-----AAGRSPPPNYEMPVEAPPS-VGGGEINGENN 119
           AKQLLP       RNF   TPP S     +AGR+PPP Y + V+A P+ VGGGE+N E+N
Sbjct: 61  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRESN 120

[Close]

BLAST of CmoCh17G003430 vs. NCBI nr
Match: gi|700192197|gb|KGN47401.1| (hypothetical protein Csa_6G312040 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-38
Identity = 92/136 (67.65%), Postives = 102/136 (75.00%), Query Frame = 1


Query: 1   MKLFGYSVNASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQL 60
           MKLFG+SV AS   +     LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61

Query: 61  AKQLLP-------RNFFTPTPPPS-----AAGRSPPPNYEMPVEAPPS-VGGGEINGENN 119
           AKQLLP       RNF   TPP S     +AGR+PPP Y + V+A P+ VGGGE+N E+N
Sbjct: 62  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRESN 121

[Close]

BLAST of CmoCh17G003430 vs. NCBI nr
Match: gi|659117022|ref|XP_008458383.1| (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 4.4e-37
Identity = 89/134 (66.42%), Postives = 102/134 (76.12%), Query Frame = 1


Query: 1   MKLFGYSVNASAEPS-----LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQL 60
           MKLFG+SV AS   +     LGAPC NH KRF+CQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 2   MKLFGFSVTASTTTTEGAIKLGAPCPNHDKRFECQFCGREFANSQALGGHQNAHKRERQL 61

Query: 61  AKQLLP-------RNFFTPTPPPS----AAGRSPPPNYEMPVEAPPS-VGGGEINGENNG 118
           AKQLLP       RNFFT TPP +    +AGR+PPP   + V+A P+ VGGG+++ E+NG
Sbjct: 62  AKQLLPLHPTKHSRNFFTSTPPSTIGIWSAGRAPPPKDGIQVQARPAVVGGGDVSRESNG 121

[Close]

BLAST of CmoCh17G003430 vs. NCBI nr
Match: gi|672175470|ref|XP_008807788.1| (PREDICTED: zinc finger protein 6-like [Phoenix dactylifera])

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-14
Identity = 58/143 (40.56%), Postives = 71/143 (49.65%), Query Frame = 1


Query: 1   MKLFGYSVNASAEPS-LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL 60
           M+LFG++V    E    G       +RF+CQ+C REFANSQALGGHQNAHK+ERQ AK+ 
Sbjct: 9   MRLFGFAVTEPGEDDHRGGSSGEGGRRFECQYCRREFANSQALGGHQNAHKKERQRAKRA 68

Query: 61  ---LPRNFFTPTPP----------PSAAGRSPPPNYEM---------------PVEAPPS 115
                R F  P P           P+AA   PPP +                 P  +PP 
Sbjct: 69  QFHAARRFALPAPHHPLPRAAFWCPTAAASPPPPPFPAPPLHVPLSSWPSAPPPPPSPPF 128

[Close]

BLAST of CmoCh17G003430 vs. NCBI nr
Match: gi|743868952|ref|XP_010905700.1| (PREDICTED: zinc finger protein 6-like [Elaeis guineensis])

HSP 1 Score: 82.8 bits (203), Expect = 4.4e-13
Identity = 58/140 (41.43%), Postives = 72/140 (51.43%), Query Frame = 1


Query: 1   MKLFGYSVNASAEPS-LGAPCANHIKRFQCQFCGREFANSQALGGHQNAHKRERQLAKQL 60
           ++LFG++V    E    G       +RF+CQ+C REFANSQALGGHQNAHK+ERQ AK+ 
Sbjct: 9   VRLFGFAVTEPGEDDHRGGGSVEGGRRFECQYCRREFANSQALGGHQNAHKKERQRAKRA 68

Query: 61  ---LPRNFFTPTPP----------PSAAGRSPP---PNYEM---------PVEAPPSVGG 115
                R F  P P           PSAA  +PP   P   +         P  +PP   G
Sbjct: 69  QFHAARRFALPAPHHPLARAAFWCPSAATSTPPFPAPPLHVQLSAWPCAPPPPSPPCATG 128

The following BLAST results are available for this feature:

BLAST of CmoCh17G003430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZFP6_ARATH	9.9e-13	37.69	Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1	[more]
ZFP5_ARATH	1.7e-09	45.71	Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1	[more]
GIS_ARATH	5.1e-09	49.32	Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1	[more]
GIS2_ARATH	3.3e-08	47.06	Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1	[more]
ZFP8_ARATH	9.6e-08	67.57	Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1	[more]

BLAST of CmoCh17G003430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI02_CUCSA	7.3e-39	67.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1	[more]
F6H746_VITVI	4.2e-10	36.47	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=...	[more]
D7KUY0_ARALL	5.5e-10	36.15	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
B9HWW5_POPTR	1.2e-09	36.88	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s15060g PE=4 SV=1	[more]
A0A067KMC9_JATCU	1.2e-09	42.59	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13000 PE=4 SV=1	[more]

BLAST of CmoCh17G003430 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67030.1	5.6e-14	37.69	zinc finger protein 6	[more]
AT1G10480.1	9.8e-11	45.71	zinc finger protein 5	[more]
AT3G58070.1	2.9e-10	49.32	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06650.1	1.9e-09	47.06	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G41940.1	5.4e-09	67.57	zinc finger protein 8	[more]

BLAST of CmoCh17G003430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464754\|ref\|XP_004150094.1\|	1.0e-38	67.65	PREDICTED: zinc finger protein 6-like [Cucumis sativus]	[more]
gi\|700192197\|gb\|KGN47401.1\|	1.0e-38	67.65	hypothetical protein Csa_6G312040 [Cucumis sativus]	[more]
gi\|659117022\|ref\|XP_008458383.1\|	4.4e-37	66.42	PREDICTED: zinc finger protein 6-like [Cucumis melo]	[more]
gi\|672175470\|ref\|XP_008807788.1\|	3.1e-14	40.56	PREDICTED: zinc finger protein 6-like [Phoenix dactylifera]	[more]
gi\|743868952\|ref\|XP_010905700.1\|	4.4e-13	41.43	PREDICTED: zinc finger protein 6-like [Elaeis guineensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2
IPR013087	Znf_C2H2_type

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0001101	response to acid chemical
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh17G003430.1	CmoCh17G003430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 29..49 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 27..54 score: 12
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	GENE3D	G3DSA:3.30.160.60		coord: 25..53 score: 9.
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 25..55 score: 6.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh17G003430	Cucsa.069470	Cucumber (Gy14) v1	cgycmoB0106
CmoCh17G003430	CmaCh17G003540	Cucurbita maxima (Rimu)	cmacmoB353
CmoCh17G003430	CmaCh08G012570	Cucurbita maxima (Rimu)	cmacmoB887
CmoCh17G003430	Cla009266	Watermelon (97103) v1	cmowmB353
CmoCh17G003430	Cla015120	Watermelon (97103) v1	cmowmB329
CmoCh17G003430	Csa6G312040	Cucumber (Chinese Long) v2	cmocuB368
CmoCh17G003430	MELO3C021287	Melon (DHL92) v3.5.1	cmomeB306
CmoCh17G003430	ClCG09G005290	Watermelon (Charleston Gray)	cmowcgB306
CmoCh17G003430	ClCG06G004780	Watermelon (Charleston Gray)	cmowcgB325
CmoCh17G003430	CSPI06G17200	Wild cucumber (PI 183967)	cmocpiB371
CmoCh17G003430	Lsi09G014690	Bottle gourd (USVL1VR-Ls)	cmolsiB320
CmoCh17G003430	Cp4.1LG12g03060	Cucurbita pepo (Zucchini)	cmocpeB335
CmoCh17G003430	Cp4.1LG17g00450	Cucurbita pepo (Zucchini)	cmocpeB340
CmoCh17G003430	MELO3C021287.2	Melon (DHL92) v3.6.1	cmomedB351
CmoCh17G003430	CsaV3_6G022570	Cucumber (Chinese Long) v3	cmocucB0442
CmoCh17G003430	Cla97C06G114240	Watermelon (97103) v2	cmowmbB361
CmoCh17G003430	Bhi12G001700	Wax gourd	cmowgoB0454
CmoCh17G003430	CsGy6G016690	Cucumber (Gy14) v2	cgybcmoB743
CmoCh17G003430	Carg18870	Silver-seed gourd	carcmoB0958
CmoCh17G003430	Carg05531	Silver-seed gourd	carcmoB0097

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh17G003430	CmoCh08G012270	Cucurbita moschata (Rifu)	cmocmoB310

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh17G003430	Cucumber (Gy14) v2	cgybcmoB317
CmoCh17G003430	Melon (DHL92) v3.6.1	cmomedB384
CmoCh17G003430	Melon (DHL92) v3.6.1	cmomedB385
CmoCh17G003430	Silver-seed gourd	carcmoB0389
CmoCh17G003430	Cucumber (Chinese Long) v3	cmocucB0416
CmoCh17G003430	Cucumber (Chinese Long) v3	cmocucB0420
CmoCh17G003430	Cucumber (Chinese Long) v3	cmocucB0443
CmoCh17G003430	Watermelon (97103) v2	cmowmbB347
CmoCh17G003430	Watermelon (97103) v2	cmowmbB351
CmoCh17G003430	Wax gourd	cmowgoB0469
CmoCh17G003430	Wax gourd	cmowgoB0472
CmoCh17G003430	Cucurbita moschata (Rifu)	cmocmoB196
CmoCh17G003430	Cucurbita moschata (Rifu)	cmocmoB198
CmoCh17G003430	Cucurbita moschata (Rifu)	cmocmoB307
CmoCh17G003430	Cucumber (Gy14) v1	cgycmoB0178
CmoCh17G003430	Cucumber (Gy14) v1	cgycmoB0707
CmoCh17G003430	Cucurbita maxima (Rimu)	cmacmoB812
CmoCh17G003430	Cucurbita maxima (Rimu)	cmacmoB775
CmoCh17G003430	Wild cucumber (PI 183967)	cmocpiB349
CmoCh17G003430	Wild cucumber (PI 183967)	cmocpiB352
CmoCh17G003430	Cucumber (Chinese Long) v2	cmocuB342
CmoCh17G003430	Cucumber (Chinese Long) v2	cmocuB345
CmoCh17G003430	Melon (DHL92) v3.5.1	cmomeB334
CmoCh17G003430	Melon (DHL92) v3.5.1	cmomeB335
CmoCh17G003430	Watermelon (Charleston Gray)	cmowcgB312
CmoCh17G003430	Watermelon (Charleston Gray)	cmowcgB316
CmoCh17G003430	Watermelon (97103) v1	cmowmB341
CmoCh17G003430	Watermelon (97103) v1	cmowmB344
CmoCh17G003430	Cucurbita pepo (Zucchini)	cmocpeB334
CmoCh17G003430	Cucurbita pepo (Zucchini)	cmocpeB365
CmoCh17G003430	Cucurbita pepo (Zucchini)	cmocpeB373
CmoCh17G003430	Bottle gourd (USVL1VR-Ls)	cmolsiB331
CmoCh17G003430	Bottle gourd (USVL1VR-Ls)	cmolsiB339
CmoCh17G003430	Bottle gourd (USVL1VR-Ls)	cmolsiB342