Cucsa.069470 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.069470
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionZinc finger protein, putative
Locationscaffold00714 : 264048 .. 264402 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTACGTCTACTGATGGAGCCACCAACTTGGGTGCGCCATGTCCGAACCACAACAAGAGATTTGAGTGCCAATTCTGCGGCCGTGAGTTCGCCAACTCTCAAGCCCTTGGTGGCCACCAGAACGCACACAAGCGCGAGCGCCAGCTCGCCAAGCAATTACTCCCTCTCCAACCCACTAAACACTCTCGTAACTTTTTAGCTTCCACGCCGCCTTCGTCTACTGTCGGAATCTGGTCGGCGGGTAGAGCTCCACCACCGAAATATGGGATCCAGGTACAAGCGAGGCCGGCGGTGGTTGGCGGCGGGGAAGTTAACAGGGAAA

mRNA sequence

ATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTACGTCTACTGATGGAGCCACCAACTTGGGTGCGCCATGTCCGAACCACAACAAGAGATTTGAGTGCCAATTCTGCGGCCGTGAGTTCGCCAACTCTCAAGCCCTTGGTGGCCACCAGAACGCACACAAGCGCGAGCGCCAGCTCGCCAAGCAATTACTCCCTCTCCAACCCACTAAACACTCTCGTAACTTTTTAGCTTCCACGCCGCCTTCGTCTACTGTCGGAATCTGGTCGGCGGGTAGAGCTCCACCACCGAAATATGGGATCCAGGTACAAGCGAGGCCGGCGGTGGTTGGCGGCGGGGAAGTTAACAGGGAAA

Coding sequence (CDS)

ATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTACGTCTACTGATGGAGCCACCAACTTGGGTGCGCCATGTCCGAACCACAACAAGAGATTTGAGTGCCAATTCTGCGGCCGTGAGTTCGCCAACTCTCAAGCCCTTGGTGGCCACCAGAACGCACACAAGCGCGAGCGCCAGCTCGCCAAGCAATTACTCCCTCTCCAACCCACTAAACACTCTCGTAACTTTTTAGCTTCCACGCCGCCTTCGTCTACTGTCGGAATCTGGTCGGCGGGTAGAGCTCCACCACCGAAATATGGGATCCAGGTACAAGCGAGGCCGGCGGTGGTTGGCGGCGGGGAAGTTAACAGGGAAA

Protein sequence

MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNREX
Homology
[Close]
BLAST of Cucsa.069470 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 1 

Query: 1  MKLFGFSV--TASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRER 60
          +KLFG ++  T S  +       G+   + ++++ECQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8  LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 61 QLAK--QLLPLQPTKHSRNFLASTPP 83
          QL K  Q+L  +      NF   T P
Sbjct: 68 QLLKRAQMLATRGLPRHHNFHPHTNP 93

[Close]
BLAST of Cucsa.069470 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.4e-11
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 1 

Query: 1   MKLFGFSVTAS------TTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAH 60
           +KLFGF + +       TT+   +++         KR ECQ+CG+EFANSQALGGHQNAH
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

Query: 61  KRERQLAKQLLPLQPTKHS 74
           K+ER L K+ L LQ  + S
Sbjct: 83  KKER-LKKKRLQLQARRAS 100

[Close]
BLAST of Cucsa.069470 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-10
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 

Query: 27  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 64
           +HN+RFEC +C R F  SQALGGHQNAHKRERQLAK+
Sbjct: 86  SHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKR 122

[Close]
BLAST of Cucsa.069470 vs. Swiss-Prot
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-09
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 1 

Query: 27  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 64
           N+N+RFEC +C R F  SQALGGHQNAHKRERQ AK+
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126

[Close]
BLAST of Cucsa.069470 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-09
Identity = 32/68 (47.06%), Postives = 39/68 (57.35%), Query Frame = 1 

Query: 1  MKLFGFSVTASTTSTDGATNLGA-----PCPNHNKRFECQFCGREFANSQALGGHQNAHK 60
          ++LFGF   AS   ++   N           N  KRF+C +C R F  SQALGGHQNAHK
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHK 78

Query: 61 RERQLAKQ 64
          RERQ  K+
Sbjct: 79 RERQQTKR 86

[Close]
BLAST of Cucsa.069470 vs. TrEMBL
Match: A0A0A0KI02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 7.3e-63
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

Query: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60
           MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61

Query: 61  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE 119
           AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE
Sbjct: 62  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE 119

[Close]
BLAST of Cucsa.069470 vs. TrEMBL
Match: A0A0D2LRB1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241300 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-12
Identity = 44/114 (38.60%), Postives = 58/114 (50.88%), Query Frame = 1 

Query: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60
           +KLFGF++                 P  ++++ECQ+C REFANSQALGGHQNAHK+ERQL
Sbjct: 11  LKLFGFNIGERAGKGSNKAPAAGGSPELDRKYECQYCCREFANSQALGGHQNAHKKERQL 70

Query: 61  AKQL-LPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGG 114
            K+  +    T++S     + PP           APPP Y           GGG
Sbjct: 71  LKRAQMQAAATRNSMISPFTPPPHLLAAAVLPAAAPPPLYHSAFYMSHGGGGGG 124

[Close]
BLAST of Cucsa.069470 vs. TrEMBL
Match: A0A161X640_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007252 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-12
Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = 1 

Query: 1   MKLFGFSVTA------STTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAH 60
           +KLFGF+VT       ST +  G+++ G   P   +++ECQ+C REFANSQALGGHQNAH
Sbjct: 21  IKLFGFNVTEEDEEVDSTKTPSGSSDSGGVPPTDGRKYECQYCCREFANSQALGGHQNAH 80

Query: 61  KRERQLAKQLLPLQPTKHS-----RNFLAS--TPPSSTVG-----IWSAGRAPPPKYGIQ 116
           K+ERQ  K+   +Q ++++     RN + S   PP   +      I  +  APP    + 
Sbjct: 81  KKERQQLKR-AQMQASRNAAVSYMRNPMVSAFAPPPHLLAPSMPMILPSAAAPPSWMYVP 140

[Close]
BLAST of Cucsa.069470 vs. TrEMBL
Match: A0A067KMC9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13000 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.8e-12
Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 1 

Query: 1   MKLFGFSVTASTTSTDGATNL---GAP-CPNHNKRFECQFCGREFANSQALGGHQNAHKR 60
           +KLFGF++  + T  +  ++    G+P      +++ECQ+C REFANSQALGGHQNAHK+
Sbjct: 20  LKLFGFNILENNTDNNNISSKSPSGSPESDTETRKYECQYCCREFANSQALGGHQNAHKK 79

Query: 61  ERQLAKQLLPLQPTKHSRNFLASTPPSS 85
           ERQL K+       + SRNF AS  P+S
Sbjct: 80  ERQLLKR----AQIQASRNFAASYVPNS 103

[Close]
BLAST of Cucsa.069470 vs. TrEMBL
Match: F6H746_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-11
Identity = 58/153 (37.91%), Postives = 73/153 (47.71%), Query Frame = 1 

Query: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60
           MKLFGF VT +  +    +N         ++FECQ+C REFANSQALGGHQNAHK+ERQ 
Sbjct: 37  MKLFGFPVTEADEAPLTPSN-----DADIRKFECQYCRREFANSQALGGHQNAHKKERQR 96

Query: 61  AKQLLPLQPTKHSRNFLASTP----------------PSSTVG------------IWSAG 116
           AK+      T H R F A+ P                 SS++G            +WS G
Sbjct: 97  AKR--AQFQTDHHRRFAAAVPILTAHAVRSGPFICAGGSSSMGSAARFRSSPECCVWSPG 156

[Close]
BLAST of Cucsa.069470 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 73.6 bits (179), Expect = 9.5e-14
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 1 

Query: 1  MKLFGFSV--TASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRER 60
          +KLFG ++  T S  +       G+   + ++++ECQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8  LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 61 QLAK--QLLPLQPTKHSRNFLASTPP 83
          QL K  Q+L  +      NF   T P
Sbjct: 68 QLLKRAQMLATRGLPRHHNFHPHTNP 93

[Close]
BLAST of Cucsa.069470 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-12
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 1 

Query: 1   MKLFGFSVTAS------TTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAH 60
           +KLFGF + +       TT+   +++         KR ECQ+CG+EFANSQALGGHQNAH
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

Query: 61  KRERQLAKQLLPLQPTKHS 74
           K+ER L K+ L LQ  + S
Sbjct: 83  KKER-LKKKRLQLQARRAS 100

[Close]
BLAST of Cucsa.069470 vs. TAIR10
Match: AT1G68360.1 (AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 6.8e-12
Identity = 48/140 (34.29%), Postives = 66/140 (47.14%), Query Frame = 1 

Query: 1   MKLFGFSVTASTTSTDGA--TNLGAPCPNHN-------------------------KRFE 60
           +KLFGFSV      +D +  TNL +  P                            +++E
Sbjct: 15  LKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGGGGGERKYE 74

Query: 61  CQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKH-SRNFLASTPPSSTVGIWSAG 113
           CQ+C REF NSQALGGHQNAHK+ERQ  K+   LQ T++ + NF  +   S  +      
Sbjct: 75  CQYCCREFGNSQALGGHQNAHKKERQQLKR-AQLQATRNAAANFSNAGSASQFLRNPIVS 134

[Close]
BLAST of Cucsa.069470 vs. TAIR10
Match: AT3G58070.1 (AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 

Query: 27  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 64
           +HN+RFEC +C R F  SQALGGHQNAHKRERQLAK+
Sbjct: 86  SHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKR 122

[Close]
BLAST of Cucsa.069470 vs. TAIR10
Match: AT2G41940.1 (AT2G41940.1 zinc finger protein 8)

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 1 

Query: 27  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 64
           N+N+RFEC +C R F  SQALGGHQNAHKRERQ AK+
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126

[Close]
BLAST of Cucsa.069470 vs. NCBI nr
Match: gi|449464754|ref|XP_004150094.1| (PREDICTED: zinc finger protein 6-like [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

Query: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60
           MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60

Query: 61  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE 119
           AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE
Sbjct: 61  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE 118

[Close]
BLAST of Cucsa.069470 vs. NCBI nr
Match: gi|700192197|gb|KGN47401.1| (hypothetical protein Csa_6G312040 [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1 

Query: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60
           MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61

Query: 61  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE 119
           AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE
Sbjct: 62  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE 119

[Close]
BLAST of Cucsa.069470 vs. NCBI nr
Match: gi|659117022|ref|XP_008458383.1| (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 2.3e-54
Identity = 105/118 (88.98%), Postives = 111/118 (94.07%), Query Frame = 1 

Query: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60
           MKLFGFSVTASTT+T+GA  LGAPCPNH+KRFECQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 2   MKLFGFSVTASTTTTEGAIKLGAPCPNHDKRFECQFCGREFANSQALGGHQNAHKRERQL 61

Query: 61  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRE 119
           AKQLLPL PTKHSRNF  STPP ST+GIWSAGRAPPPK GIQVQARPAVVGGG+V+RE
Sbjct: 62  AKQLLPLHPTKHSRNFFTSTPP-STIGIWSAGRAPPPKDGIQVQARPAVVGGGDVSRE 118

[Close]
BLAST of Cucsa.069470 vs. NCBI nr
Match: gi|1009128827|ref|XP_015881443.1| (PREDICTED: zinc finger protein 6 [Ziziphus jujuba])

HSP 1 Score: 85.1 bits (209), Expect = 8.9e-14
Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 1 

Query: 1   MKLFGFSVTA----STTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKR 60
           +KLFGF+++     +TT +  + +      +H +++ECQ+C REFANSQALGGHQNAHK+
Sbjct: 11  IKLFGFNISEDNDLNTTRSSSSPSESQDSDHHQRKYECQYCFREFANSQALGGHQNAHKK 70

Query: 61  ERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKY 100
           ERQL K+   +Q +  SRNF AS        I SA  +PPP++
Sbjct: 71  ERQLLKR-AQMQASNASRNFSASGHHVHNPMI-SAFMSPPPRH 111

[Close]
BLAST of Cucsa.069470 vs. NCBI nr
Match: gi|1009163361|ref|XP_015899926.1| (PREDICTED: zinc finger protein 6-like [Ziziphus jujuba])

HSP 1 Score: 79.7 bits (195), Expect = 3.8e-12
Identity = 41/67 (61.19%), Postives = 47/67 (70.15%), Query Frame = 1 

Query: 1  MKLFGFSVTASTTSTDGATNLGAPCPNHN----KRFECQFCGREFANSQALGGHQNAHKR 60
          +KLFGF VT     T   T    P  +H+    KRFECQ+C REF+NSQALGGHQNAHKR
Sbjct: 19 LKLFGFPVTGCDQMT--VTRTAPPSDHHHDFDRKRFECQYCRREFSNSQALGGHQNAHKR 78

Query: 61 ERQLAKQ 64
          ERQLAK+
Sbjct: 79 ERQLAKR 83

The following BLAST results are available for this feature:
BLAST of Cucsa.069470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP6_ARATH1.7e-1245.35Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1[more]
ZFP5_ARATH5.4e-1148.10Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1[more]
GIS_ARATH2.7e-1075.68Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1[more]
ZFP8_ARATH3.0e-0972.97Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1[more]
GIS2_ARATH3.9e-0947.06Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1[more]
BLAST of Cucsa.069470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI02_CUCSA7.3e-63100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1[more]
A0A0D2LRB1_GOSRA3.4e-1238.60Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241300 PE=4 SV=1[more]
A0A161X640_DAUCA3.4e-1239.10Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007252 PE=4 SV=1[more]
A0A067KMC9_JATCU5.8e-1247.73Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13000 PE=4 SV=1[more]
F6H746_VITVI1.3e-1137.91Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=... [more]
BLAST of Cucsa.069470 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67030.19.5e-1445.35 zinc finger protein 6[more]
AT1G10480.13.1e-1248.10 zinc finger protein 5[more]
AT1G68360.16.8e-1234.29 C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G58070.11.5e-1175.68 C2H2 and C2HC zinc fingers superfamily protein[more]
AT2G41940.11.7e-1072.97 zinc finger protein 8[more]
BLAST of Cucsa.069470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464754|ref|XP_004150094.1|1.0e-62100.00PREDICTED: zinc finger protein 6-like [Cucumis sativus][more]
gi|700192197|gb|KGN47401.1|1.0e-62100.00hypothetical protein Csa_6G312040 [Cucumis sativus][more]
gi|659117022|ref|XP_008458383.1|2.3e-5488.98PREDICTED: zinc finger protein 6-like [Cucumis melo][more]
gi|1009128827|ref|XP_015881443.1|8.9e-1445.63PREDICTED: zinc finger protein 6 [Ziziphus jujuba][more]
gi|1009163361|ref|XP_015899926.1|3.8e-1261.19PREDICTED: zinc finger protein 6-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.069470.1Cucsa.069470.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 34..54
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 32..59
score: 12
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 30..58
score: 1.
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 29..60
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.069470Cla009266Watermelon (97103) v1cgywmB069
Cucsa.069470Csa6G312040Cucumber (Chinese Long) v2cgycuB064
Cucsa.069470MELO3C021287Melon (DHL92) v3.5.1cgymeB069
Cucsa.069470ClCG06G004780Watermelon (Charleston Gray)cgywcgB069
Cucsa.069470CSPI06G17200Wild cucumber (PI 183967)cgycpiB065
Cucsa.069470CmaCh17G003540Cucurbita maxima (Rimu)cgycmaB0111
Cucsa.069470CmaCh08G012570Cucurbita maxima (Rimu)cgycmaB0113
Cucsa.069470CmoCh08G012270Cucurbita moschata (Rifu)cgycmoB0107
Cucsa.069470CmoCh17G003430Cucurbita moschata (Rifu)cgycmoB0106
Cucsa.069470Lsi09G014690Bottle gourd (USVL1VR-Ls)cgylsiB068
Cucsa.069470Cp4.1LG12g03060Cucurbita pepo (Zucchini)cgycpeB0107
Cucsa.069470Cp4.1LG17g00450Cucurbita pepo (Zucchini)cgycpeB0108
Cucsa.069470MELO3C021287.2Melon (DHL92) v3.6.1cgymedB068
Cucsa.069470CsaV3_6G022570Cucumber (Chinese Long) v3cgycucB067
Cucsa.069470Cla97C06G114240Watermelon (97103) v2cgywmbB067
Cucsa.069470Bhi12G001700Wax gourdcgywgoB072
Cucsa.069470Carg05531Silver-seed gourdcarcgyB0074
Cucsa.069470Carg18870Silver-seed gourdcarcgyB0785
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.069470Cucumber (Chinese Long) v3cgycucB066
Cucsa.069470Watermelon (97103) v2cgywmbB066
Cucsa.069470Wax gourdcgywgoB074
Cucsa.069470Cucumber (Gy14) v1cgycgyB020
Cucsa.069470Cucurbita maxima (Rimu)cgycmaB0112
Cucsa.069470Cucurbita moschata (Rifu)cgycmoB0105
Cucsa.069470Wild cucumber (PI 183967)cgycpiB064
Cucsa.069470Cucumber (Chinese Long) v2cgycuB063
Cucsa.069470Melon (DHL92) v3.5.1cgymeB070
Cucsa.069470Watermelon (97103) v1cgywmB068
Cucsa.069470Bottle gourd (USVL1VR-Ls)cgylsiB069
Cucsa.069470Melon (DHL92) v3.6.1cgymedB069