Csa6G312040 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G312040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionZinc finger protein-like protein; contains IPR013087 (Zinc finger C2H2-type/integrase DNA-binding domain)
LocationChr6 : 14856914 .. 14857490 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTACGTCTACTGATGGAGCCACCAACTTGGGTGCGCCATGTCCGAACCACAACAAGAGATTTGAGTGCCAATTCTGCGGCCGTGAGTTCGCCAACTCTCAAGCCCTTGGTGGCCACCAGAACGCACACAAGCGCGAGCGCCAGCTCGCCAAGCAATTACTCCCTCTCCAACCCACTAAACACTCTCGTAACTTTTTAGCTTCCACGCCGCCTTCGTCTACTGTCGGAATCTGGTCGGCGGGTAGAGCTCCACCACCGAAATATGGGATCCAGGTACAAGCGAGGCCGGCGGTGGTTGGCGGCGGGGAAGTTAACAGGGAAAGTAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCATCGGGCAGGATTTTCTGTTAAGTGAAGTATTGTTTTTTCTTTTCTTTTTTTTTTTTAACAATTTCCTTCCAAAGCAGAATTGTGTTAAACTGTTGAATGGAAAATTGGGAGGAAAGTGTTTGGAATTTGATCGATTATTATGAATGGAAATTATGATACATGGAATACTACCAATTTTCTC

mRNA sequence

ATGATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTACGTCTACTGATGGAGCCACCAACTTGGGTGCGCCATGTCCGAACCACAACAAGAGATTTGAGTGCCAATTCTGCGGCCGTGAGTTCGCCAACTCTCAAGCCCTTGGTGGCCACCAGAACGCACACAAGCGCGAGCGCCAGCTCGCCAAGCAATTACTCCCTCTCCAACCCACTAAACACTCTCGTAACTTTTTAGCTTCCACGCCGCCTTCGTCTACTGTCGGAATCTGGTCGGCGGGTAGAGCTCCACCACCGAAATATGGGATCCAGGTACAAGCGAGGCCGGCGGTGGTTGGCGGCGGGGAAGTTAACAGGGAAAGTAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCATCGGGCAGGATTTTCTGTTAA

Coding sequence (CDS)

ATGATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTACGTCTACTGATGGAGCCACCAACTTGGGTGCGCCATGTCCGAACCACAACAAGAGATTTGAGTGCCAATTCTGCGGCCGTGAGTTCGCCAACTCTCAAGCCCTTGGTGGCCACCAGAACGCACACAAGCGCGAGCGCCAGCTCGCCAAGCAATTACTCCCTCTCCAACCCACTAAACACTCTCGTAACTTTTTAGCTTCCACGCCGCCTTCGTCTACTGTCGGAATCTGGTCGGCGGGTAGAGCTCCACCACCGAAATATGGGATCCAGGTACAAGCGAGGCCGGCGGTGGTTGGCGGCGGGGAAGTTAACAGGGAAAGTAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCATCGGGCAGGATTTTCTGTTAA

Protein sequence

MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRESNGVDLHLSLAPSSGRIFC*
Homology
[Close]
BLAST of Csa6G312040 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-12
Identity = 39/86 (45.35%), Postives = 51/86 (59.30%), Query Frame = 1 

Query: 2  MKLFGFSV--TASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRER 61
          +KLFG ++  T S  +       G+   + ++++ECQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8  LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 62 QLAK--QLLPLQPTKHSRNFLASTPP 84
          QL K  Q+L  +      NF   T P
Sbjct: 68 QLLKRAQMLATRGLPRHHNFHPHTNP 93

[Close]
BLAST of Csa6G312040 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.3e-11
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 1 

Query: 2   MKLFGFSVTAS------TTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAH 61
           +KLFGF + +       TT+   +++         KR ECQ+CG+EFANSQALGGHQNAH
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

Query: 62  KRERQLAKQLLPLQPTKHS 75
           K+ER L K+ L LQ  + S
Sbjct: 83  KKER-LKKKRLQLQARRAS 100

[Close]
BLAST of Csa6G312040 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.1e-10
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 1 

Query: 28  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 65
           +HN+RFEC +C R F  SQALGGHQNAHKRERQLAK+
Sbjct: 86  SHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKR 122

[Close]
BLAST of Csa6G312040 vs. Swiss-Prot
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.5e-09
Identity = 27/37 (72.97%), Postives = 29/37 (78.38%), Query Frame = 1 

Query: 28  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 65
           N+N+RFEC +C R F  SQALGGHQNAHKRERQ AK+
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126

[Close]
BLAST of Csa6G312040 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.5e-09
Identity = 32/68 (47.06%), Postives = 37/68 (54.41%), Query Frame = 1 

Query: 2  MKLFGFSVTASTTSTDGATNLGA-----PCPNHNKRFECQFCGREFANSQALGGHQNAHK 61
          ++LFGF   AS   ++   N           N  KRF+C +C R F  SQALGGHQNAHK
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHK 78

Query: 62 RERQLAKQ 65
          RERQ  K+
Sbjct: 79 RERQQTKR 86

[Close]
BLAST of Csa6G312040 vs. TrEMBL
Match: A0A0A0KI02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 7.4e-75
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1 

Query: 1   MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60
           MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ
Sbjct: 1   MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60

Query: 61  LAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRES 120
           LAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRES
Sbjct: 61  LAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRES 120

Query: 121 NGVDLHLSLAPSSGRIFC 139
           NGVDLHLSLAPSSGRIFC
Sbjct: 121 NGVDLHLSLAPSSGRIFC 138

[Close]
BLAST of Csa6G312040 vs. TrEMBL
Match: F6H746_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.3e-15
Identity = 69/177 (38.98%), Postives = 85/177 (48.02%), Query Frame = 1 

Query: 1   MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60
           +MKLFGF VT +  +    +N         ++FECQ+C REFANSQALGGHQNAHK+ERQ
Sbjct: 36  VMKLFGFPVTEADEAPLTPSN-----DADIRKFECQYCRREFANSQALGGHQNAHKKERQ 95

Query: 61  LAKQLLPLQPTKHSRNFLASTP----------------PSSTVG------------IWSA 120
            AK+      T H R F A+ P                 SS++G            +WS 
Sbjct: 96  RAKRAQ--FQTDHHRRFAAAVPILTAHAVRSGPFICAGGSSSMGSAARFRSSPECCVWSP 155

Query: 121 G---RAPPPKYGI-------QVQARPAVVGGGEVNR------ESNGVDLHLSLAPSS 134
           G     P P  G+       + Q RP  VG GE+        E   VDLHL LAPSS
Sbjct: 156 GPPPMLPAPSAGVPYCFYLGRQQGRPMSVGPGELGHGGGEVSERADVDLHLRLAPSS 205

[Close]
BLAST of Csa6G312040 vs. TrEMBL
Match: K4AWE5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-12
Identity = 51/141 (36.17%), Postives = 73/141 (51.77%), Query Frame = 1 

Query: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61
           +KLFGF VT    +T          P+ +KRFECQFC REFANSQALGGHQNAHK+ERQ 
Sbjct: 18  VKLFGFQVTECDQTTPPPL-----VPSEDKRFECQFCHREFANSQALGGHQNAHKKERQR 77

Query: 62  AK---------QLLPLQPTKHSRNFLASTPPSSTVGIWSAG--RAPPPKYGIQVQARPAV 121
            +         +  P+ P  ++         ++ V  + +      P +Y I ++ +  +
Sbjct: 78  TRRAKFIGYQQRFRPVVPLINAHAVRTGALINNNVRYYRSQILSGVPLRYQIHLRQQQHM 137

Query: 122 VGGGEVNRESNGVDLHLSLAP 132
           +     + +   VDLHL LAP
Sbjct: 138 MAVQNQDVDGTEVDLHLRLAP 153

[Close]
BLAST of Csa6G312040 vs. TrEMBL
Match: A0A067K6I8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18960 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-12
Identity = 64/157 (40.76%), Postives = 75/157 (47.77%), Query Frame = 1 

Query: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61
           ++LFGF+VT    S+  A         ++KRFECQ+C R FANSQALGGHQNAHKRER  
Sbjct: 18  LRLFGFTVTDCEKSSVTA---------YSKRFECQYCHRGFANSQALGGHQNAHKRERGR 77

Query: 62  AKQLLPLQPTKHSRNFLA---------STPPSSTVGIWSAG--------RAPPPKYGIQV 121
           AK+    Q TK  R   A          + PSS  G   AG         APP   G   
Sbjct: 78  AKR---AQFTKVQRLITAIPIITKDSTGSRPSSICGSTGAGIATVSLCAPAPPSTGGAPQ 137

Query: 122 QARPAVVGGGEV--------NRESNGVDLHLSLAPSS 134
              P+ VG            N   + VDLHL LAP S
Sbjct: 138 VVGPSGVGLRSAPPLIAQVNNGADDDVDLHLRLAPYS 162

[Close]
BLAST of Csa6G312040 vs. TrEMBL
Match: A0A0D2LRB1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241300 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-12
Identity = 44/114 (38.60%), Postives = 58/114 (50.88%), Query Frame = 1 

Query: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61
           +KLFGF++                 P  ++++ECQ+C REFANSQALGGHQNAHK+ERQL
Sbjct: 11  LKLFGFNIGERAGKGSNKAPAAGGSPELDRKYECQYCCREFANSQALGGHQNAHKKERQL 70

Query: 62  AKQL-LPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGG 115
            K+  +    T++S     + PP           APPP Y           GGG
Sbjct: 71  LKRAQMQAAATRNSMISPFTPPPHLLAAAVLPAAAPPPLYHSAFYMSHGGGGGG 124

[Close]
BLAST of Csa6G312040 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13
Identity = 39/86 (45.35%), Postives = 51/86 (59.30%), Query Frame = 1 

Query: 2  MKLFGFSV--TASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRER 61
          +KLFG ++  T S  +       G+   + ++++ECQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8  LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 62 QLAK--QLLPLQPTKHSRNFLASTPP 84
          QL K  Q+L  +      NF   T P
Sbjct: 68 QLLKRAQMLATRGLPRHHNFHPHTNP 93

[Close]
BLAST of Csa6G312040 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 68.6 bits (166), Expect = 3.6e-12
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 1 

Query: 2   MKLFGFSVTAS------TTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAH 61
           +KLFGF + +       TT+   +++         KR ECQ+CG+EFANSQALGGHQNAH
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

Query: 62  KRERQLAKQLLPLQPTKHS 75
           K+ER L K+ L LQ  + S
Sbjct: 83  KKER-LKKKRLQLQARRAS 100

[Close]
BLAST of Csa6G312040 vs. TAIR10
Match: AT1G68360.1 (AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 8.0e-12
Identity = 48/140 (34.29%), Postives = 64/140 (45.71%), Query Frame = 1 

Query: 2   MKLFGFSVTASTTSTDGA--TNLGAPCPNHN-------------------------KRFE 61
           +KLFGFSV      +D +  TNL +  P                            +++E
Sbjct: 15  LKLFGFSVDGEEDFSDQSVKTNLSSVSPERGEFPAGSSGRSGGGVRSRGGGGGGGERKYE 74

Query: 62  CQFCGREFANSQALGGHQNAHKRERQLAKQLLPLQPTKH-SRNFLASTPPSSTVGIWSAG 114
           CQ+C REF NSQALGGHQNAHK+ERQ  K+   LQ T++ + NF  +   S  +      
Sbjct: 75  CQYCCREFGNSQALGGHQNAHKKERQQLKR-AQLQATRNAAANFSNAGSASQFLRNPIVS 134

[Close]
BLAST of Csa6G312040 vs. TAIR10
Match: AT3G58070.1 (AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-11
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 1 

Query: 28  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 65
           +HN+RFEC +C R F  SQALGGHQNAHKRERQLAK+
Sbjct: 86  SHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKR 122

[Close]
BLAST of Csa6G312040 vs. TAIR10
Match: AT2G41940.1 (AT2G41940.1 zinc finger protein 8)

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-10
Identity = 27/37 (72.97%), Postives = 29/37 (78.38%), Query Frame = 1 

Query: 28  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 65
           N+N+RFEC +C R F  SQALGGHQNAHKRERQ AK+
Sbjct: 90  NNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126

[Close]
BLAST of Csa6G312040 vs. NCBI nr
Match: gi|700192197|gb|KGN47401.1| (hypothetical protein Csa_6G312040 [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 1.1e-74
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1 

Query: 1   MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60
           MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ
Sbjct: 1   MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60

Query: 61  LAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRES 120
           LAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRES
Sbjct: 61  LAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRES 120

Query: 121 NGVDLHLSLAPSSGRIFC 139
           NGVDLHLSLAPSSGRIFC
Sbjct: 121 NGVDLHLSLAPSSGRIFC 138

[Close]
BLAST of Csa6G312040 vs. NCBI nr
Match: gi|449464754|ref|XP_004150094.1| (PREDICTED: zinc finger protein 6-like [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 4.0e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1 

Query: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61
           MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60

Query: 62  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRESN 121
           AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRESN
Sbjct: 61  AKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRESN 120

Query: 122 GVDLHLSLAPSSGRIFC 139
           GVDLHLSLAPSSGRIFC
Sbjct: 121 GVDLHLSLAPSSGRIFC 137

[Close]
BLAST of Csa6G312040 vs. NCBI nr
Match: gi|659117022|ref|XP_008458383.1| (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 251.9 bits (642), Expect = 6.5e-64
Identity = 122/136 (89.71%), Postives = 128/136 (94.12%), Query Frame = 1 

Query: 1   MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60
           MMKLFGFSVTASTT+T+GA  LGAPCPNH+KRFECQFCGREFANSQALGGHQNAHKRERQ
Sbjct: 1   MMKLFGFSVTASTTTTEGAIKLGAPCPNHDKRFECQFCGREFANSQALGGHQNAHKRERQ 60

Query: 61  LAKQLLPLQPTKHSRNFLASTPPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNRES 120
           LAKQLLPL PTKHSRNF  STPP ST+GIWSAGRAPPPK GIQVQARPAVVGGG+V+RES
Sbjct: 61  LAKQLLPLHPTKHSRNFFTSTPP-STIGIWSAGRAPPPKDGIQVQARPAVVGGGDVSRES 120

Query: 121 NGVDLHLSLAPSSGRI 137
           NGVDLHLSLAPSS RI
Sbjct: 121 NGVDLHLSLAPSSARI 135

[Close]
BLAST of Csa6G312040 vs. NCBI nr
Match: gi|731388268|ref|XP_010649539.1| (PREDICTED: zinc finger protein 6-like [Vitis vinifera])

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-15
Identity = 69/177 (38.98%), Postives = 85/177 (48.02%), Query Frame = 1 

Query: 1   MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60
           +MKLFGF VT +  +    +N         ++FECQ+C REFANSQALGGHQNAHK+ERQ
Sbjct: 65  VMKLFGFPVTEADEAPLTPSN-----DADIRKFECQYCRREFANSQALGGHQNAHKKERQ 124

Query: 61  LAKQLLPLQPTKHSRNFLASTP----------------PSSTVG------------IWSA 120
            AK+      T H R F A+ P                 SS++G            +WS 
Sbjct: 125 RAKRAQ--FQTDHHRRFAAAVPILTAHAVRSGPFICAGGSSSMGSAARFRSSPECCVWSP 184

Query: 121 G---RAPPPKYGI-------QVQARPAVVGGGEVNR------ESNGVDLHLSLAPSS 134
           G     P P  G+       + Q RP  VG GE+        E   VDLHL LAPSS
Sbjct: 185 GPPPMLPAPSAGVPYCFYLGRQQGRPMSVGPGELGHGGGEVSERADVDLHLRLAPSS 234

[Close]
BLAST of Csa6G312040 vs. NCBI nr
Match: gi|743868952|ref|XP_010905700.1| (PREDICTED: zinc finger protein 6-like [Elaeis guineensis])

HSP 1 Score: 82.4 bits (202), Expect = 6.8e-13
Identity = 57/148 (38.51%), Postives = 70/148 (47.30%), Query Frame = 1 

Query: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61
           ++LFGF+VT          + G       +RFECQ+C REFANSQALGGHQNAHK+ERQ 
Sbjct: 9   VRLFGFAVTEPGEDD----HRGGGSVEGGRRFECQYCRREFANSQALGGHQNAHKKERQR 68

Query: 62  AKQLLPLQPTKHSRNFLASTP--PSSTVGIWSAGRA------PPPKYGIQVQA------- 121
           AK+         +R F    P  P +    W    A      P P   +Q+ A       
Sbjct: 69  AKR----AQFHAARRFALPAPHHPLARAAFWCPSAATSTPPFPAPPLHVQLSAWPCAPPP 128

Query: 122 -RPAVVGGGEVNRESNGVDLHLSLAPSS 134
             P    G         +DLHLSLAPSS
Sbjct: 129 PSPPCATGRRAPDVDPEIDLHLSLAPSS 148

The following BLAST results are available for this feature:
BLAST of Csa6G312040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP6_ARATH2.0e-1245.35Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1[more]
ZFP5_ARATH6.3e-1148.10Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1[more]
GIS_ARATH3.1e-1075.68Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1[more]
ZFP8_ARATH3.5e-0972.97Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1[more]
GIS2_ARATH4.5e-0947.06Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1[more]
BLAST of Csa6G312040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI02_CUCSA7.4e-75100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1[more]
F6H746_VITVI2.3e-1538.98Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=... [more]
K4AWE5_SOLLC3.1e-1236.17Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A067K6I8_JATCU3.1e-1240.76Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18960 PE=4 SV=1[more]
A0A0D2LRB1_GOSRA4.0e-1238.60Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241300 PE=4 SV=1[more]
BLAST of Csa6G312040 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67030.11.1e-1345.35 zinc finger protein 6[more]
AT1G10480.13.6e-1248.10 zinc finger protein 5[more]
AT1G68360.18.0e-1234.29 C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G58070.11.8e-1175.68 C2H2 and C2HC zinc fingers superfamily protein[more]
AT2G41940.12.0e-1072.97 zinc finger protein 8[more]
BLAST of Csa6G312040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192197|gb|KGN47401.1|1.1e-74100.00hypothetical protein Csa_6G312040 [Cucumis sativus][more]
gi|449464754|ref|XP_004150094.1|4.0e-74100.00PREDICTED: zinc finger protein 6-like [Cucumis sativus][more]
gi|659117022|ref|XP_008458383.1|6.5e-6489.71PREDICTED: zinc finger protein 6-like [Cucumis melo][more]
gi|731388268|ref|XP_010649539.1|3.2e-1538.98PREDICTED: zinc finger protein 6-like [Vitis vinifera][more]
gi|743868952|ref|XP_010905700.1|6.8e-1338.51PREDICTED: zinc finger protein 6-like [Elaeis guineensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0008150 biological_process
biological_process GO:0001101 response to acid chemical
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0044763 single-organism cellular process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU137391cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G312040.1Csa6G312040.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU137391CU137391transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 35..55
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 33..60
score: 12
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 31..59
score: 1.
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 30..61
score: 2.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa6G312040Cla009266Watermelon (97103) v1cuwmB538
Csa6G312040MELO3C021287Melon (DHL92) v3.5.1cumeB445
Csa6G312040ClCG06G004780Watermelon (Charleston Gray)cuwcgB477
Csa6G312040Lsi09G014690Bottle gourd (USVL1VR-Ls)culsiB403
Csa6G312040MELO3C021287.2Melon (DHL92) v3.6.1cumedB426
Csa6G312040Cla97C06G114240Watermelon (97103) v2cuwmbB469
Csa6G312040Bhi12G001700Wax gourdcuwgoB547
Csa6G312040CSPI06G17200Wild cucumber (PI 183967)cpicuB313
Csa6G312040Cucsa.069470Cucumber (Gy14) v1cgycuB064
Csa6G312040CmaCh08G012570Cucurbita maxima (Rimu)cmacuB904
Csa6G312040CmaCh17G003540Cucurbita maxima (Rimu)cmacuB378
Csa6G312040CmoCh17G003430Cucurbita moschata (Rifu)cmocuB368
Csa6G312040CmoCh08G012270Cucurbita moschata (Rifu)cmocuB891
Csa6G312040Cp4.1LG17g00450Cucurbita pepo (Zucchini)cpecuB324
Csa6G312040Cp4.1LG12g03060Cucurbita pepo (Zucchini)cpecuB151
Csa6G312040CsGy6G016690Cucumber (Gy14) v2cgybcuB281
Csa6G312040Carg05531Silver-seed gourdcarcuB0079
Csa6G312040Carg18870Silver-seed gourdcarcuB0724
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa6G312040Melon (DHL92) v3.6.1cumedB477
Csa6G312040Silver-seed gourdcarcuB0307
Csa6G312040Watermelon (97103) v2cuwmbB465
Csa6G312040Wax gourdcuwgoB558
Csa6G312040Cucumber (Chinese Long) v2cucuB120
Csa6G312040Cucumber (Gy14) v1cgycuB371
Csa6G312040Cucurbita maxima (Rimu)cmacuB845
Csa6G312040Cucurbita moschata (Rifu)cmocuB254
Csa6G312040Melon (DHL92) v3.5.1cumeB497
Csa6G312040Watermelon (Charleston Gray)cuwcgB428
Csa6G312040Watermelon (Charleston Gray)cuwcgB474
Csa6G312040Watermelon (97103) v1cuwmB497
Csa6G312040Cucurbita pepo (Zucchini)cpecuB625
Csa6G312040Cucurbita pepo (Zucchini)cpecuB875
Csa6G312040Bottle gourd (USVL1VR-Ls)culsiB463
Csa6G312040Cucumber (Gy14) v2cgybcuB146