CmaCh08G012570 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G012570
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Nucleic acid binding protein, putative
Location	Cma_Chr08 : 7668927 .. 7669295 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTGATCAAGCCACCATGGGTGCGCCATGCGCGAACCTCAACAAGGACGATAAGCGATTCGAGTGCCAATTCTGTGGCCGTGAGTTCGCCAATTCTCAAGCTCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCGTTTCGATCCCAATAAACACCCACGTTTTTTCACTTCCACGCCGCCGCCCTCCGCCACCGTGATCTGGTCCAGATCTGGTGGTGCTCCGCCGTCTGCTGCTGGTGGTGGTGGTGAAGTGAATGGGGAAAATGGCGTTGATCTCCACCTCAGTCTCGCGCCATCCTCAAGGATCTTCTGTTAA

mRNA sequence

ATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTGATCAAGCCACCATGGGTGCGCCATGCGCGAACCTCAACAAGGACGATAAGCGATTCGAGTGCCAATTCTGTGGCCGTGAGTTCGCCAATTCTCAAGCTCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCGTTTCGATCCCAATAAACACCCACGTTTTTTCACTTCCACGCCGCCGCCCTCCGCCACCGTGATCTGGTCCAGATCTGGTGGTGCTCCGCCGTCTGCTGCTGGTGGTGGTGGTGAAGTGAATGGGGAAAATGGCGTTGATCTCCACCTCAGTCTCGCGCCATCCTCAAGGATCTTCTGTTAA

Coding sequence (CDS)

ATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTGATCAAGCCACCATGGGTGCGCCATGCGCGAACCTCAACAAGGACGATAAGCGATTCGAGTGCCAATTCTGTGGCCGTGAGTTCGCCAATTCTCAAGCTCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGCCAGCTCGCCAAACAACTCCGTTTCGATCCCAATAAACACCCACGTTTTTTCACTTCCACGCCGCCGCCCTCCGCCACCGTGATCTGGTCCAGATCTGGTGGTGCTCCGCCGTCTGCTGCTGGTGGTGGTGGTGAAGTGAATGGGGAAAATGGCGTTGATCTCCACCTCAGTCTCGCGCCATCCTCAAGGATCTTCTGTTAA

Protein sequence

MKLFGFSVTASDQATMGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFDPNKHPRFFTSTPPPSATVIWSRSGGAPPSAAGGGGEVNGENGVDLHLSLAPSSRIFC

Homology

[Close]

BLAST of CmaCh08G012570 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-11
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 1


Query: 1   MKLFGFSV----TASDQATMGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRER 60
           +KLFG ++    +  +Q++   P +    + +++ECQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 61  QLAKQLR------------FDPNKHPRFFTSTPPP 80
           QL K+ +            F P+ +P      P P
Sbjct: 68  QLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLP 102

[Close]

BLAST of CmaCh08G012570 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-09
Identity = 36/74 (48.65%), Postives = 43/74 (58.11%), Query Frame = 1


Query: 1  MKLFGFSVTASDQATMGAPCANLN----KDD---KRFECQFCGREFANSQALGGHQNAHK 60
          ++LFGF   AS + +      N N    KDD   KRF+C +C R F  SQALGGHQNAHK
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHK 78

Query: 61 RERQLAKQLRFDPN 68
          RERQ  K+     N
Sbjct: 79 RERQQTKRFNLHSN 92

[Close]

BLAST of CmaCh08G012570 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-08
Identity = 40/114 (35.09%), Postives = 58/114 (50.88%), Query Frame = 1


Query: 1   MKLFGFSVTASDQA----TMGAPCANLNKDD----KRFECQFCGREFANSQALGGHQNAH 60
           +KLFGF + +  +     T  +  ++ N       KR ECQ+CG+EFANSQALGGHQNAH
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

Query: 61  KRERQLAKQLRFDPNKHP-RFFTSTPPPSATVIWSRSGGAPPSAAGGGGEVNGE 106
           K+ER   K+L+    +    ++ +      T  + R    P   A     VN +
Sbjct: 83  KKERLKKKRLQLQARRASIGYYLTNHQQPITTSFQRQYKTPSYCAFSSMHVNND 136

[Close]

BLAST of CmaCh08G012570 vs. Swiss-Prot
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-08
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1


Query: 24  NKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 62
           N +++RFEC +C R F  SQALGGHQNAHKRERQ AK+
Sbjct: 89  NNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126

[Close]

BLAST of CmaCh08G012570 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.4e-08
Identity = 38/93 (40.86%), Postives = 49/93 (52.69%), Query Frame = 1


Query: 12  DQATMGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ----LRFDPN 71
           DQ    +   N    ++RFEC +C R F  SQALGGHQNAHKRERQLAK+      + P+
Sbjct: 73  DQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSSYFYHPD 132

Query: 72  KHPRFF------TSTPPPSATVIWSRSGGAPPS 95
            +P  +      T+ P  +A      S G  PS
Sbjct: 133 NNPYSYRHYPSWTNGPLTAARSYGGFSSGPKPS 165

[Close]

BLAST of CmaCh08G012570 vs. TrEMBL
Match: A0A0A0KI02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 4.3e-34
Identity = 95/141 (67.38%), Postives = 101/141 (71.63%), Query Frame = 1


Query: 1   MKLFGFSVTASDQAT-----MGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRE 60
           MKLFGFSVTAS  +T     +GAPC N NK   RFECQFCGREFANSQALGGHQNAHKRE
Sbjct: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNK---RFECQFCGREFANSQALGGHQNAHKRE 61

Query: 61  RQLAKQ-LRFDPNKHPRFFTSTPPPSATV-IWSRSGGAPPSAAG----------GGGEVN 120
           RQLAKQ L   P KH R F ++ PPS+TV IWS +G APP   G          GGGEVN
Sbjct: 62  RQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWS-AGRAPPPKYGIQVQARPAVVGGGEVN 121

Query: 121 GE-NGVDLHLSLAPSS-RIFC 123
            E NGVDLHLSLAPSS RIFC
Sbjct: 122 RESNGVDLHLSLAPSSGRIFC 138

[Close]

BLAST of CmaCh08G012570 vs. TrEMBL
Match: F6H746_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.9e-15
Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 1


Query: 1   MKLFGFSVTASDQATMGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAK 60
           MKLFGF VT +D+A +     + + D ++FECQ+C REFANSQALGGHQNAHK+ERQ AK
Sbjct: 37  MKLFGFPVTEADEAPL---TPSNDADIRKFECQYCRREFANSQALGGHQNAHKKERQRAK 96

Query: 61  QLRFDPNKHPRFFTSTPPPSATVIWSRSGGAPPSAAGGGGEV 103
           + +F  + H RF  + P  +A  +  RSG  P   AGG   +
Sbjct: 97  RAQFQTDHHRRFAAAVPILTAHAV--RSG--PFICAGGSSSM 131

[Close]

BLAST of CmaCh08G012570 vs. TrEMBL
Match: K4AWE5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1


Query: 1  MKLFGFSVTASDQATMGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAK 60
          +KLFGF VT  DQ T   P   +  +DKRFECQFC REFANSQALGGHQNAHK+ERQ  +
Sbjct: 18 VKLFGFQVTECDQTT---PPPLVPSEDKRFECQFCHREFANSQALGGHQNAHKKERQRTR 77

Query: 61 QLRF 65
          + +F
Sbjct: 78 RAKF 78

[Close]

BLAST of CmaCh08G012570 vs. TrEMBL
Match: A0A151RXK5_CAJCA (Zinc finger protein 6 OS=Cajanus cajan GN=KK1_031078 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-12
Identity = 57/144 (39.58%), Postives = 69/144 (47.92%), Query Frame = 1


Query: 1   MKLFGFSVTASDQATMGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAK 60
           +KLFG  +T  D         +   D KRF+C FC REFANSQALGGHQNAHKRER+   
Sbjct: 22  LKLFGIPLTPPDY--------DYEVDIKRFKCHFCFREFANSQALGGHQNAHKRERKKTA 81

Query: 61  QLRFDPNKHPRFFTSTPPPSATVIWSRSGGAPPSAAGGG--------------------- 120
              F   +H + FT   PPS   I    GG+ P     G                     
Sbjct: 82  LSPFGTYRHNQRFT---PPSPNAIMLPHGGSGPLVCPRGPWLSWDDAHHGVRFVRPMDGN 141

Query: 121 --GEVNGENGVDLHLSLAPSSRIF 122
             G+ NG + VDL+LSLA +S  F
Sbjct: 142 DNGDDNGSDDVDLNLSLANTSSKF 154

[Close]

BLAST of CmaCh08G012570 vs. TrEMBL
Match: V7AZG7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G253900g PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.6e-12
Identity = 58/148 (39.19%), Postives = 72/148 (48.65%), Query Frame = 1


Query: 1   MKLFGFSVTASDQATMGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAK 60
           +KLFGF +T    +T+   C +     KRF+C FC REFANSQALGGHQNAHKRERQ A 
Sbjct: 32  LKLFGFPLTPPS-STVSPHCPH-----KRFKCHFCYREFANSQALGGHQNAHKRERQKAA 91

Query: 61  QLRFDPNKHPRFFTSTPPPSATVIWSRSGGAP-----------------PSAA------- 116
              F    H + F  TPP  + ++    G  P                 P  A       
Sbjct: 92  LSPFTYFLHHQRF--TPPTHSPIVLPHGGSTPLVAPRDHHHHHRVGLVRPMGAGAISIST 151

[Close]

BLAST of CmaCh08G012570 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 1


Query: 1   MKLFGFSV----TASDQATMGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRER 60
           +KLFG ++    +  +Q++   P +    + +++ECQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 61  QLAKQLR------------FDPNKHPRFFTSTPPP 80
           QL K+ +            F P+ +P      P P
Sbjct: 68  QLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLP 102

[Close]

BLAST of CmaCh08G012570 vs. TAIR10
Match: AT5G06650.1 (AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 5.9e-11
Identity = 36/74 (48.65%), Postives = 43/74 (58.11%), Query Frame = 1


Query: 1  MKLFGFSVTASDQATMGAPCANLN----KDD---KRFECQFCGREFANSQALGGHQNAHK 60
          ++LFGF   AS + +      N N    KDD   KRF+C +C R F  SQALGGHQNAHK
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHK 78

Query: 61 RERQLAKQLRFDPN 68
          RERQ  K+     N
Sbjct: 79 RERQQTKRFNLHSN 92

[Close]

BLAST of CmaCh08G012570 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 60.5 bits (145), Expect = 8.5e-10
Identity = 40/114 (35.09%), Postives = 58/114 (50.88%), Query Frame = 1


Query: 1   MKLFGFSVTASDQA----TMGAPCANLNKDD----KRFECQFCGREFANSQALGGHQNAH 60
           +KLFGF + +  +     T  +  ++ N       KR ECQ+CG+EFANSQALGGHQNAH
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

Query: 61  KRERQLAKQLRFDPNKHP-RFFTSTPPPSATVIWSRSGGAPPSAAGGGGEVNGE 106
           K+ER   K+L+    +    ++ +      T  + R    P   A     VN +
Sbjct: 83  KKERLKKKRLQLQARRASIGYYLTNHQQPITTSFQRQYKTPSYCAFSSMHVNND 136

[Close]

BLAST of CmaCh08G012570 vs. TAIR10
Match: AT2G41940.1 (AT2G41940.1 zinc finger protein 8)

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 1


Query: 24  NKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 62
           N +++RFEC +C R F  SQALGGHQNAHKRERQ AK+
Sbjct: 89  NNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126

[Close]

BLAST of CmaCh08G012570 vs. TAIR10
Match: AT1G68360.1 (AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09
Identity = 24/43 (55.81%), Postives = 34/43 (79.07%), Query Frame = 1


Query: 27  DKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFDPNKH 70
           ++++ECQ+C REF NSQALGGHQNAHK+ERQ  K+ +    ++
Sbjct: 70  ERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRN 112

[Close]

BLAST of CmaCh08G012570 vs. NCBI nr
Match: gi|449464754|ref|XP_004150094.1| (PREDICTED: zinc finger protein 6-like [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 6.1e-34
Identity = 95/141 (67.38%), Postives = 101/141 (71.63%), Query Frame = 1


Query: 1   MKLFGFSVTASDQAT-----MGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRE 60
           MKLFGFSVTAS  +T     +GAPC N NK   RFECQFCGREFANSQALGGHQNAHKRE
Sbjct: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNK---RFECQFCGREFANSQALGGHQNAHKRE 60

Query: 61  RQLAKQ-LRFDPNKHPRFFTSTPPPSATV-IWSRSGGAPPSAAG----------GGGEVN 120
           RQLAKQ L   P KH R F ++ PPS+TV IWS +G APP   G          GGGEVN
Sbjct: 61  RQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWS-AGRAPPPKYGIQVQARPAVVGGGEVN 120

Query: 121 GE-NGVDLHLSLAPSS-RIFC 123
            E NGVDLHLSLAPSS RIFC
Sbjct: 121 RESNGVDLHLSLAPSSGRIFC 137

[Close]

BLAST of CmaCh08G012570 vs. NCBI nr
Match: gi|700192197|gb|KGN47401.1| (hypothetical protein Csa_6G312040 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 6.1e-34
Identity = 95/141 (67.38%), Postives = 101/141 (71.63%), Query Frame = 1


Query: 1   MKLFGFSVTASDQAT-----MGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRE 60
           MKLFGFSVTAS  +T     +GAPC N NK   RFECQFCGREFANSQALGGHQNAHKRE
Sbjct: 2   MKLFGFSVTASTTSTDGATNLGAPCPNHNK---RFECQFCGREFANSQALGGHQNAHKRE 61

Query: 61  RQLAKQ-LRFDPNKHPRFFTSTPPPSATV-IWSRSGGAPPSAAG----------GGGEVN 120
           RQLAKQ L   P KH R F ++ PPS+TV IWS +G APP   G          GGGEVN
Sbjct: 62  RQLAKQLLPLQPTKHSRNFLASTPPSSTVGIWS-AGRAPPPKYGIQVQARPAVVGGGEVN 121

Query: 121 GE-NGVDLHLSLAPSS-RIFC 123
            E NGVDLHLSLAPSS RIFC
Sbjct: 122 RESNGVDLHLSLAPSSGRIFC 138

[Close]

BLAST of CmaCh08G012570 vs. NCBI nr
Match: gi|659117022|ref|XP_008458383.1| (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 142.1 bits (357), Expect = 6.3e-31
Identity = 87/135 (64.44%), Postives = 93/135 (68.89%), Query Frame = 1


Query: 1   MKLFGFSVTASDQAT-----MGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRE 60
           MKLFGFSVTAS   T     +GAPC N    DKRFECQFCGREFANSQALGGHQNAHKRE
Sbjct: 2   MKLFGFSVTASTTTTEGAIKLGAPCPN---HDKRFECQFCGREFANSQALGGHQNAHKRE 61

Query: 61  RQLAKQ-LRFDPNKHPRFFTSTPPPSATVIWSRSGGAPPSAAG----------GGGEVNG 119
           RQLAKQ L   P KH R F ++ PPS   IWS +G APP   G          GGG+V+ 
Sbjct: 62  RQLAKQLLPLHPTKHSRNFFTSTPPSTIGIWS-AGRAPPPKDGIQVQARPAVVGGGDVSR 121

[Close]

BLAST of CmaCh08G012570 vs. NCBI nr
Match: gi|731388268|ref|XP_010649539.1| (PREDICTED: zinc finger protein 6-like [Vitis vinifera])

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14
Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 1


Query: 1   MKLFGFSVTASDQATMGAPCANLNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAK 60
           MKLFGF VT +D+A +     + + D ++FECQ+C REFANSQALGGHQNAHK+ERQ AK
Sbjct: 66  MKLFGFPVTEADEAPL---TPSNDADIRKFECQYCRREFANSQALGGHQNAHKKERQRAK 125

Query: 61  QLRFDPNKHPRFFTSTPPPSATVIWSRSGGAPPSAAGGGGEV 103
           + +F  + H RF  + P  +A  +  RSG  P   AGG   +
Sbjct: 126 RAQFQTDHHRRFAAAVPILTAHAV--RSG--PFICAGGSSSM 160

[Close]

BLAST of CmaCh08G012570 vs. NCBI nr
Match: gi|1009163361|ref|XP_015899926.1| (PREDICTED: zinc finger protein 6-like [Ziziphus jujuba])

HSP 1 Score: 86.7 bits (213), Expect = 3.2e-14
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = 1


Query: 1  MKLFGFSVTASDQATMG--APCANLNKD--DKRFECQFCGREFANSQALGGHQNAHKRER 60
          +KLFGF VT  DQ T+   AP ++ + D   KRFECQ+C REF+NSQALGGHQNAHKRER
Sbjct: 19 LKLFGFPVTGCDQMTVTRTAPPSDHHHDFDRKRFECQYCRREFSNSQALGGHQNAHKRER 78

Query: 61 QLAKQLRFDPNKH 70
          QLAK+  F   +H
Sbjct: 79 QLAKRAEFQAQQH 91

The following BLAST results are available for this feature:

BLAST of CmaCh08G012570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZFP6_ARATH	3.3e-11	38.95	Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1	[more]
GIS2_ARATH	1.0e-09	48.65	Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1	[more]
ZFP5_ARATH	1.5e-08	35.09	Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1	[more]
ZFP8_ARATH	3.4e-08	68.42	Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1	[more]
GIS_ARATH	4.4e-08	40.86	Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1	[more]

BLAST of CmaCh08G012570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI02_CUCSA	4.3e-34	67.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1	[more]
F6H746_VITVI	9.9e-15	50.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=...	[more]
K4AWE5_SOLLC	1.4e-13	64.06	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A151RXK5_CAJCA	2.1e-12	39.58	Zinc finger protein 6 OS=Cajanus cajan GN=KK1_031078 PE=4 SV=1	[more]
V7AZG7_PHAVU	4.6e-12	39.19	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G253900g PE=4 SV=1	[more]

BLAST of CmaCh08G012570 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67030.1	1.8e-12	38.95	zinc finger protein 6	[more]
AT5G06650.1	5.9e-11	48.65	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G10480.1	8.5e-10	35.09	zinc finger protein 5	[more]
AT2G41940.1	1.9e-09	68.42	zinc finger protein 8	[more]
AT1G68360.1	1.9e-09	55.81	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of CmaCh08G012570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464754\|ref\|XP_004150094.1\|	6.1e-34	67.38	PREDICTED: zinc finger protein 6-like [Cucumis sativus]	[more]
gi\|700192197\|gb\|KGN47401.1\|	6.1e-34	67.38	hypothetical protein Csa_6G312040 [Cucumis sativus]	[more]
gi\|659117022\|ref\|XP_008458383.1\|	6.3e-31	64.44	PREDICTED: zinc finger protein 6-like [Cucumis melo]	[more]
gi\|731388268\|ref\|XP_010649539.1\|	1.4e-14	50.00	PREDICTED: zinc finger protein 6-like [Vitis vinifera]	[more]
gi\|1009163361\|ref\|XP_015899926.1\|	3.2e-14	61.64	PREDICTED: zinc finger protein 6-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2
IPR013087	Znf_C2H2_type

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009755	hormone-mediated signaling pathway
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G012570.1	CmaCh08G012570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 32..52 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 30..57 score: 12
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	GENE3D	G3DSA:3.30.160.60		coord: 26..56 score: 3.
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 26..58 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G012570	Cucsa.069470	Cucumber (Gy14) v1	cgycmaB0113
CmaCh08G012570	Cla009266	Watermelon (97103) v1	cmawmB878
CmaCh08G012570	Csa6G312040	Cucumber (Chinese Long) v2	cmacuB904
CmaCh08G012570	MELO3C021287	Melon (DHL92) v3.5.1	cmameB816
CmaCh08G012570	ClCG06G004780	Watermelon (Charleston Gray)	cmawcgB804
CmaCh08G012570	CSPI06G17200	Wild cucumber (PI 183967)	cmacpiB924
CmaCh08G012570	CmoCh08G012270	Cucurbita moschata (Rifu)	cmacmoB912
CmaCh08G012570	CmoCh17G003430	Cucurbita moschata (Rifu)	cmacmoB887
CmaCh08G012570	Lsi09G014690	Bottle gourd (USVL1VR-Ls)	cmalsiB811
CmaCh08G012570	Cp4.1LG12g03060	Cucurbita pepo (Zucchini)	cmacpeB895
CmaCh08G012570	Cp4.1LG17g00450	Cucurbita pepo (Zucchini)	cmacpeB915
CmaCh08G012570	MELO3C021287.2	Melon (DHL92) v3.6.1	cmamedB914
CmaCh08G012570	CsaV3_6G022570	Cucumber (Chinese Long) v3	cmacucB1074
CmaCh08G012570	Cla97C06G114240	Watermelon (97103) v2	cmawmbB921
CmaCh08G012570	Bhi12G001700	Wax gourd	cmawgoB1091
CmaCh08G012570	CsGy6G016690	Cucumber (Gy14) v2	cgybcmaB872
CmaCh08G012570	Carg18870	Silver-seed gourd	carcmaB0988
CmaCh08G012570	Carg05531	Silver-seed gourd	carcmaB0096

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh08G012570	CmaCh17G003540	Cucurbita maxima (Rimu)	cmacmaB373

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G012570	Watermelon (97103) v2	cmawmbB911
CmaCh08G012570	Watermelon (97103) v2	cmawmbB914
CmaCh08G012570	Wax gourd	cmawgoB1089
CmaCh08G012570	Wax gourd	cmawgoB1107
CmaCh08G012570	Cucurbita maxima (Rimu)	cmacmaB298
CmaCh08G012570	Cucurbita maxima (Rimu)	cmacmaB554
CmaCh08G012570	Cucumber (Gy14) v1	cgycmaB0187
CmaCh08G012570	Cucumber (Gy14) v1	cgycmaB0731
CmaCh08G012570	Cucurbita moschata (Rifu)	cmacmoB883
CmaCh08G012570	Wild cucumber (PI 183967)	cmacpiB900
CmaCh08G012570	Wild cucumber (PI 183967)	cmacpiB903
CmaCh08G012570	Cucumber (Chinese Long) v2	cmacuB882
CmaCh08G012570	Cucumber (Chinese Long) v2	cmacuB885
CmaCh08G012570	Melon (DHL92) v3.5.1	cmameB849
CmaCh08G012570	Melon (DHL92) v3.5.1	cmameB850
CmaCh08G012570	Watermelon (Charleston Gray)	cmawcgB793
CmaCh08G012570	Watermelon (Charleston Gray)	cmawcgB796
CmaCh08G012570	Watermelon (97103) v1	cmawmB869
CmaCh08G012570	Watermelon (97103) v1	cmawmB873
CmaCh08G012570	Cucurbita pepo (Zucchini)	cmacpeB928
CmaCh08G012570	Cucurbita pepo (Zucchini)	cmacpeB931
CmaCh08G012570	Bottle gourd (USVL1VR-Ls)	cmalsiB821
CmaCh08G012570	Bottle gourd (USVL1VR-Ls)	cmalsiB832
CmaCh08G012570	Bottle gourd (USVL1VR-Ls)	cmalsiB834
CmaCh08G012570	Cucumber (Gy14) v2	cgybcmaB270
CmaCh08G012570	Cucumber (Gy14) v2	cgybcmaB454
CmaCh08G012570	Melon (DHL92) v3.6.1	cmamedB950
CmaCh08G012570	Silver-seed gourd	carcmaB0394
CmaCh08G012570	Cucumber (Chinese Long) v3	cmacucB1045
CmaCh08G012570	Cucumber (Chinese Long) v3	cmacucB1049