Lsi09G014690 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G014690
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionNucleic acid binding protein, putative
Locationchr09 : 22692090 .. 22692488 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAGCTATTTGGTTTTTCATTGACGGCTAGTACTACTGATAGAGCGAACTTGGGTGCGCCATGTTCGAACCACAACAAGAGATTCGAGTGCCAATTCTGCGGCCGTGAGTTCGCCAATTCTCAAGCCCTCGGCGGCCACCAGAACGCTCACAAGCGCGAGCGCCAGCTCGCTAAACAACTACTTCCTTTCCAACCCTCTAAACACTCTCGTAATTTTTTAAATTCTACATCGTCTTTGCCGCCGCCCTCCGCTGCCGTGATCTGGTCCGCTGGAAGAGCTCCGCCGCTGGAATATGGGATGTCGATGCAAGCACCGCCGTTGGTTGGCGGTGGCAATGTGAATGGAGAAAGTAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCCTCTTAA

mRNA sequence

ATGATGAAGCTATTTGGTTTTTCATTGACGGCTAGTACTACTGATAGAGCGAACTTGGGTGCGCCATGTTCGAACCACAACAAGAGATTCGAGTGCCAATTCTGCGGCCGTGAGTTCGCCAATTCTCAAGCCCTCGGCGGCCACCAGAACGCTCACAAGCGCGAGCGCCAGCTCGCTAAACAACTACTTCCTTTCCAACCCTCTAAACACTCTCGTAATTTTTTAAATTCTACATCGTCTTTGCCGCCGCCCTCCGCTGCCGTGATCTGGTCCGCTGGAAGAGCTCCGCCGCTGGAATATGGGATGTCGATGCAAGCACCGCCGTTGGTTGGCGGTGGCAATGTGAATGGAGAAAGTAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCCTCTTAA

Coding sequence (CDS)

ATGATGAAGCTATTTGGTTTTTCATTGACGGCTAGTACTACTGATAGAGCGAACTTGGGTGCGCCATGTTCGAACCACAACAAGAGATTCGAGTGCCAATTCTGCGGCCGTGAGTTCGCCAATTCTCAAGCCCTCGGCGGCCACCAGAACGCTCACAAGCGCGAGCGCCAGCTCGCTAAACAACTACTTCCTTTCCAACCCTCTAAACACTCTCGTAATTTTTTAAATTCTACATCGTCTTTGCCGCCGCCCTCCGCTGCCGTGATCTGGTCCGCTGGAAGAGCTCCGCCGCTGGAATATGGGATGTCGATGCAAGCACCGCCGTTGGTTGGCGGTGGCAATGTGAATGGAGAAAGTAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCCTCTTAA

Protein sequence

MMKLFGFSLTASTTDRANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPLEYGMSMQAPPLVGGGNVNGESNGVDLHLSLAPSS
Homology
[Close]
BLAST of Lsi09G014690 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.5e-11
Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 1 

Query: 2   MKLFGFSLTASTT-----DRANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRER 61
           +KLFG +L  +T+          G+   + ++++ECQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 62  QLAK--QLLPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPLEYGMSMQAPP 109
           QL K  Q+L  +      NF   T+ L    A          PL + +S   PP
Sbjct: 68  QLLKRAQMLATRGLPRHHNFHPHTNPLLSAFA----------PLPHLLSQPHPP 111

[Close]
BLAST of Lsi09G014690 vs. Swiss-Prot
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.7e-10
Identity = 45/112 (40.18%), Postives = 55/112 (49.11%), Query Frame = 1 

Query: 24  SNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ------LLPFQP--SKHSRNFL 83
           +N+N+RFEC +C R F  SQALGGHQNAHKRERQ AK+      L   QP    H   FL
Sbjct: 89  NNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFL 148

Query: 84  NSTSSLPPPS-----AAVIWSAGRAPPLEYGMSMQAPPLVGGGNVNGESNGV 123
           N+      PS      +     G   P  Y  +  APP      +NG   G+
Sbjct: 149 NNHHHRHYPSWTTEARSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPLGL 200

[Close]
BLAST of Lsi09G014690 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09
Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 1 

Query: 2   MKLFGFSLTAS--TTDRANLGAPCSNHN-------KRFECQFCGREFANSQALGGHQNAH 61
           +KLFGF L +   T +     +  S+ N       KR ECQ+CG+EFANSQALGGHQNAH
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

Query: 62  KRERQLAKQLLPFQPSKHSRNFLNSTSSLP 83
           K+ER L K+ L  Q  + S  +  +    P
Sbjct: 83  KKER-LKKKRLQLQARRASIGYYLTNHQQP 111

[Close]
BLAST of Lsi09G014690 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 

Query: 25  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 62
           +HN+RFEC +C R F  SQALGGHQNAHKRERQLAK+
Sbjct: 86  SHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKR 122

[Close]
BLAST of Lsi09G014690 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-08
Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 1 

Query: 2  MKLFGFSLTASTTDRA--------NLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHK 61
          ++LFGF   AS  +          N      N  KRF+C +C R F  SQALGGHQNAHK
Sbjct: 19 IRLFGFEFGASHEESESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNAHK 78

[Close]
BLAST of Lsi09G014690 vs. TrEMBL
Match: A0A0A0KI02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-50
Identity = 108/136 (79.41%), Postives = 114/136 (83.82%), Query Frame = 1 

Query: 1   MMKLFGFSLTASTTDR---ANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60
           MMKLFGFS+TASTT      NLGAPC NHNKRFECQFCGREFANSQALGGHQNAHKRERQ
Sbjct: 1   MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60

Query: 61  LAKQLLPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPLEYGMSMQA-PPLVGGGNVN 120
           LAKQLLP QP+KHSRNFL ST   PP S   IWSAGRAPP +YG+ +QA P +VGGG VN
Sbjct: 61  LAKQLLPLQPTKHSRNFLAST---PPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVN 120

Query: 121 GESNGVDLHLSLAPSS 133
            ESNGVDLHLSLAPSS
Sbjct: 121 RESNGVDLHLSLAPSS 133

[Close]
BLAST of Lsi09G014690 vs. TrEMBL
Match: A0A067KMC9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13000 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-11
Identity = 61/178 (34.27%), Postives = 84/178 (47.19%), Query Frame = 1 

Query: 2   MKLFGFSLTASTTDRANL------GAPCSN-HNKRFECQFCGREFANSQALGGHQNAHKR 61
           +KLFGF++  + TD  N+      G+P S+   +++ECQ+C REFANSQALGGHQNAHK+
Sbjct: 20  LKLFGFNILENNTDNNNISSKSPSGSPESDTETRKYECQYCCREFANSQALGGHQNAHKK 79

Query: 62  ERQLAKQL-----LPFQPSKHSRNFLNSTSSLPP--------PSAAVIWSAGRAPPLEY- 121
           ERQL K+        F  S    +  ++ S LPP        P+   +    ++PP  Y 
Sbjct: 80  ERQLLKRAQIQASRNFAASYVPNSMFSNFSPLPPHLLPPAVVPAPPQLIQQHQSPPWFYT 139

Query: 122 ------GMSMQAPPLVG------------------------GGNVNGESNGVDLHLSL 129
                  MS   P L+                         GGN   +  G+DLHLSL
Sbjct: 140 TSSYMSRMSHARPSLISGPGEGLGVYARISPEKWSEFAGEDGGNHRDKGLGLDLHLSL 197

[Close]
BLAST of Lsi09G014690 vs. TrEMBL
Match: A0A067K6I8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18960 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-11
Identity = 60/152 (39.47%), Postives = 79/152 (51.97%), Query Frame = 1 

Query: 2   MKLFGFSLTASTTDRANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAK- 61
           ++LFGF++T    +++++ A    ++KRFECQ+C R FANSQALGGHQNAHKRER  AK 
Sbjct: 18  LRLFGFTVT--DCEKSSVTA----YSKRFECQYCHRGFANSQALGGHQNAHKRERGRAKR 77

Query: 62  -QLLPFQPSKHSRNFLNSTSSLPPPSA---------AVIWSAGRAPPLEYGMSM------ 121
            Q    Q    +   +   S+   PS+         A +     APP   G         
Sbjct: 78  AQFTKVQRLITAIPIITKDSTGSRPSSICGSTGAGIATVSLCAPAPPSTGGAPQVVGPSG 137

Query: 122 ----QAPPLVGGGNVNGESNGVDLHLSLAPSS 133
                APPL+   N NG  + VDLHL LAP S
Sbjct: 138 VGLRSAPPLIAQVN-NGADDDVDLHLRLAPYS 162

[Close]
BLAST of Lsi09G014690 vs. TrEMBL
Match: A0A151RXK5_CAJCA (Zinc finger protein 6 OS=Cajanus cajan GN=KK1_031078 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-11
Identity = 60/147 (40.82%), Postives = 74/147 (50.34%), Query Frame = 1 

Query: 2   MKLFGFSLTASTTDRANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 61
           +KLFG  LT    D            KRF+C FC REFANSQALGGHQNAHKRER+    
Sbjct: 22  LKLFGIPLTPPDYDY-------EVDIKRFKCHFCFREFANSQALGGHQNAHKRERK-KTA 81

Query: 62  LLPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPL-------------EYGMSMQAPP 121
           L PF   +H++ F       PP   A++   G + PL              +G+    P 
Sbjct: 82  LSPFGTYRHNQRF------TPPSPNAIMLPHGGSGPLVCPRGPWLSWDDAHHGVRFVRPM 141

Query: 122 LVGGGNVNGESNG---VDLHLSLAPSS 133
               GN NG+ NG   VDL+LSLA +S
Sbjct: 142 ---DGNDNGDDNGSDDVDLNLSLANTS 151

[Close]
BLAST of Lsi09G014690 vs. TrEMBL
Match: A0A0A0KRQ5_CUCSA (Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucumis sativus GN=Gl-3 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-11
Identity = 68/191 (35.60%), Postives = 89/191 (46.60%), Query Frame = 1 

Query: 2   MKLFGFSLTA------STTDRANLGAPC-SNHNKRFECQFCGREFANSQALGGHQNAHKR 61
           +KLFGF +        ST   ++ GA   S+ ++++ECQ+C REFANSQALGGHQNAHK+
Sbjct: 22  LKLFGFDVQEDLDQDDSTPTSSDSGAAVPSSGDRKYECQYCYREFANSQALGGHQNAHKK 81

Query: 62  ERQLAK--QLLPFQPSKHSRNFLNSTSSLPP---PSAAVIWSAG------RAPP------ 121
           ERQ  K  QL   + +   RN + +  + PP   PSAAV  S+       RAPP      
Sbjct: 82  ERQQLKRAQLQASRNAAVFRNPIVAAFAPPPHLLPSAAVTASSSWPVYIPRAPPQFQVSH 141

Query: 122 -------LEYGMSMQAPP-----------------------------LVGGGNVNGESNG 133
                    YG    APP                              V GG    +  G
Sbjct: 142 GCVFTPSSSYGGGGDAPPPPSPPDFFTMGSRSSHGMVDAPMSLSRFSKVDGGTAFDDGPG 201

[Close]
BLAST of Lsi09G014690 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-12
Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 1 

Query: 2   MKLFGFSLTASTT-----DRANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRER 61
           +KLFG +L  +T+          G+   + ++++ECQ+C REFANSQALGGHQNAHK+ER
Sbjct: 8   LKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Query: 62  QLAK--QLLPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPLEYGMSMQAPP 109
           QL K  Q+L  +      NF   T+ L    A          PL + +S   PP
Sbjct: 68  QLLKRAQMLATRGLPRHHNFHPHTNPLLSAFA----------PLPHLLSQPHPP 111

[Close]
BLAST of Lsi09G014690 vs. TAIR10
Match: AT2G41940.1 (AT2G41940.1 zinc finger protein 8)

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11
Identity = 45/112 (40.18%), Postives = 55/112 (49.11%), Query Frame = 1 

Query: 24  SNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ------LLPFQP--SKHSRNFL 83
           +N+N+RFEC +C R F  SQALGGHQNAHKRERQ AK+      L   QP    H   FL
Sbjct: 89  NNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFL 148

Query: 84  NSTSSLPPPS-----AAVIWSAGRAPPLEYGMSMQAPPLVGGGNVNGESNGV 123
           N+      PS      +     G   P  Y  +  APP      +NG   G+
Sbjct: 149 NNHHHRHYPSWTTEARSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPLGL 200

[Close]
BLAST of Lsi09G014690 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 64.3 bits (155), Expect = 6.4e-11
Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 1 

Query: 2   MKLFGFSLTAS--TTDRANLGAPCSNHN-------KRFECQFCGREFANSQALGGHQNAH 61
           +KLFGF L +   T +     +  S+ N       KR ECQ+CG+EFANSQALGGHQNAH
Sbjct: 23  IKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAH 82

Query: 62  KRERQLAKQLLPFQPSKHSRNFLNSTSSLP 83
           K+ER L K+ L  Q  + S  +  +    P
Sbjct: 83  KKER-LKKKRLQLQARRASIGYYLTNHQQP 111

[Close]
BLAST of Lsi09G014690 vs. TAIR10
Match: AT3G58070.1 (AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 6.4e-11
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 

Query: 25  NHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 62
           +HN+RFEC +C R F  SQALGGHQNAHKRERQLAK+
Sbjct: 86  SHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKR 122

[Close]
BLAST of Lsi09G014690 vs. TAIR10
Match: AT1G68360.1 (AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09
Identity = 35/85 (41.18%), Postives = 48/85 (56.47%), Query Frame = 1 

Query: 28  KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLLPFQPSKHSRNFLNSTSSLPPPSAA 87
           +++ECQ+C REF NSQALGGHQNAHK+ERQ  K+         + NF N+ S+       
Sbjct: 71  RKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGSASQFLRNP 130

Query: 88  VIWSAGRAPPLEYGMSMQAPPLVGG 113
           ++  +  APP     S   P  +GG
Sbjct: 131 IV--SAFAPPPHLLSSSAVPQPMGG 153

[Close]
BLAST of Lsi09G014690 vs. NCBI nr
Match: gi|700192197|gb|KGN47401.1| (hypothetical protein Csa_6G312040 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 2.3e-50
Identity = 108/136 (79.41%), Postives = 114/136 (83.82%), Query Frame = 1 

Query: 1   MMKLFGFSLTASTTDR---ANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60
           MMKLFGFS+TASTT      NLGAPC NHNKRFECQFCGREFANSQALGGHQNAHKRERQ
Sbjct: 1   MMKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60

Query: 61  LAKQLLPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPLEYGMSMQA-PPLVGGGNVN 120
           LAKQLLP QP+KHSRNFL ST   PP S   IWSAGRAPP +YG+ +QA P +VGGG VN
Sbjct: 61  LAKQLLPLQPTKHSRNFLAST---PPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVN 120

Query: 121 GESNGVDLHLSLAPSS 133
            ESNGVDLHLSLAPSS
Sbjct: 121 RESNGVDLHLSLAPSS 133

[Close]
BLAST of Lsi09G014690 vs. NCBI nr
Match: gi|449464754|ref|XP_004150094.1| (PREDICTED: zinc finger protein 6-like [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 8.6e-50
Identity = 107/135 (79.26%), Postives = 113/135 (83.70%), Query Frame = 1 

Query: 2   MKLFGFSLTASTTDR---ANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 61
           MKLFGFS+TASTT      NLGAPC NHNKRFECQFCGREFANSQALGGHQNAHKRERQL
Sbjct: 1   MKLFGFSVTASTTSTDGATNLGAPCPNHNKRFECQFCGREFANSQALGGHQNAHKRERQL 60

Query: 62  AKQLLPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPLEYGMSMQA-PPLVGGGNVNG 121
           AKQLLP QP+KHSRNFL ST   PP S   IWSAGRAPP +YG+ +QA P +VGGG VN 
Sbjct: 61  AKQLLPLQPTKHSRNFLAST---PPSSTVGIWSAGRAPPPKYGIQVQARPAVVGGGEVNR 120

Query: 122 ESNGVDLHLSLAPSS 133
           ESNGVDLHLSLAPSS
Sbjct: 121 ESNGVDLHLSLAPSS 132

[Close]
BLAST of Lsi09G014690 vs. NCBI nr
Match: gi|659117022|ref|XP_008458383.1| (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-46
Identity = 102/136 (75.00%), Postives = 111/136 (81.62%), Query Frame = 1 

Query: 1   MMKLFGFSLTASTTDRAN---LGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQ 60
           MMKLFGFS+TASTT       LGAPC NH+KRFECQFCGREFANSQALGGHQNAHKRERQ
Sbjct: 1   MMKLFGFSVTASTTTTEGAIKLGAPCPNHDKRFECQFCGREFANSQALGGHQNAHKRERQ 60

Query: 61  LAKQLLPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPLEYGMSMQA-PPLVGGGNVN 120
           LAKQLLP  P+KHSRNF  ST    PPS   IWSAGRAPP + G+ +QA P +VGGG+V+
Sbjct: 61  LAKQLLPLHPTKHSRNFFTST----PPSTIGIWSAGRAPPPKDGIQVQARPAVVGGGDVS 120

Query: 121 GESNGVDLHLSLAPSS 133
            ESNGVDLHLSLAPSS
Sbjct: 121 RESNGVDLHLSLAPSS 132

[Close]
BLAST of Lsi09G014690 vs. NCBI nr
Match: gi|672175470|ref|XP_008807788.1| (PREDICTED: zinc finger protein 6-like [Phoenix dactylifera])

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-14
Identity = 59/150 (39.33%), Postives = 75/150 (50.00%), Query Frame = 1 

Query: 2   MKLFGFSLTASTTDRANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 61
           M+LFGF++T    D  + G       +RFECQ+C REFANSQALGGHQNAHK+ERQ AK+
Sbjct: 9   MRLFGFAVTEPGEDD-HRGGSSGEGGRRFECQYCRREFANSQALGGHQNAHKKERQRAKR 68

Query: 62  L-----------LPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPLEYGMSM------ 121
                        P  P   +  +  + ++ PPP          APPL   +S       
Sbjct: 69  AQFHAARRFALPAPHHPLPRAAFWCPTAAASPPPPPF------PAPPLHVPLSSWPSAPP 128

Query: 122 --QAPPLVGGGNVNGESNGVDLHLSLAPSS 133
              +PP            G+DLHLSLAPSS
Sbjct: 129 PPPSPPFATDRTAADVDPGIDLHLSLAPSS 151

[Close]
BLAST of Lsi09G014690 vs. NCBI nr
Match: gi|743868952|ref|XP_010905700.1| (PREDICTED: zinc finger protein 6-like [Elaeis guineensis])

HSP 1 Score: 82.8 bits (203), Expect = 4.9e-13
Identity = 58/149 (38.93%), Postives = 73/149 (48.99%), Query Frame = 1 

Query: 2   MKLFGFSLTASTTDRANLGAPCSNHNKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ 61
           ++LFGF++T    D    G       +RFECQ+C REFANSQALGGHQNAHK+ERQ AK+
Sbjct: 9   VRLFGFAVTEPGEDDHRGGGSVEG-GRRFECQYCRREFANSQALGGHQNAHKKERQRAKR 68

Query: 62  L-----------LPFQPSKHSRNFLNSTSSLPPPSAAVIWSAGRAPPLEYGMSM------ 121
                        P  P   +  +  S ++  PP          APPL   +S       
Sbjct: 69  AQFHAARRFALPAPHHPLARAAFWCPSAATSTPPFP--------APPLHVQLSAWPCAPP 128

Query: 122 -QAPPLVGGGNVNGESNGVDLHLSLAPSS 133
             +PP   G         +DLHLSLAPSS
Sbjct: 129 PPSPPCATGRRAPDVDPEIDLHLSLAPSS 148

The following BLAST results are available for this feature:
BLAST of Lsi09G014690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP6_ARATH3.5e-1139.47Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1[more]
ZFP8_ARATH8.7e-1040.18Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1[more]
ZFP5_ARATH1.1e-0944.44Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1[more]
GIS_ARATH1.1e-0975.68Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1[more]
GIS2_ARATH3.6e-0847.06Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1[more]
BLAST of Lsi09G014690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI02_CUCSA1.6e-5079.41Uncharacterized protein OS=Cucumis sativus GN=Csa_6G312040 PE=4 SV=1[more]
A0A067KMC9_JATCU1.1e-1134.27Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13000 PE=4 SV=1[more]
A0A067K6I8_JATCU2.5e-1139.47Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18960 PE=4 SV=1[more]
A0A151RXK5_CAJCA2.5e-1140.82Zinc finger protein 6 OS=Cajanus cajan GN=KK1_031078 PE=4 SV=1[more]
A0A0A0KRQ5_CUCSA2.5e-1135.60Multicellular trichome development C2H2 zinc finger transcription factor OS=Cucu... [more]
BLAST of Lsi09G014690 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67030.12.0e-1239.47 zinc finger protein 6[more]
AT2G41940.14.9e-1140.18 zinc finger protein 8[more]
AT1G10480.16.4e-1144.44 zinc finger protein 5[more]
AT3G58070.16.4e-1175.68 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G68360.12.1e-0941.18 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of Lsi09G014690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192197|gb|KGN47401.1|2.3e-5079.41hypothetical protein Csa_6G312040 [Cucumis sativus][more]
gi|449464754|ref|XP_004150094.1|8.6e-5079.26PREDICTED: zinc finger protein 6-like [Cucumis sativus][more]
gi|659117022|ref|XP_008458383.1|2.0e-4675.00PREDICTED: zinc finger protein 6-like [Cucumis melo][more]
gi|672175470|ref|XP_008807788.1|1.5e-1439.33PREDICTED: zinc finger protein 6-like [Phoenix dactylifera][more]
gi|743868952|ref|XP_010905700.1|4.9e-1338.93PREDICTED: zinc finger protein 6-like [Elaeis guineensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0001101 response to acid chemical
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0044763 single-organism cellular process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G014690.1Lsi09G014690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 32..52
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 30..57
score: 12
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 28..56
score: 1.
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 27..58
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi09G014690Csa6G312040Cucumber (Chinese Long) v2culsiB403
Lsi09G014690CSPI06G17200Wild cucumber (PI 183967)cpilsiB405
Lsi09G014690Cucsa.069470Cucumber (Gy14) v1cgylsiB068
Lsi09G014690CmaCh17G003540Cucurbita maxima (Rimu)cmalsiB331
Lsi09G014690CmaCh08G012570Cucurbita maxima (Rimu)cmalsiB811
Lsi09G014690CmoCh08G012270Cucurbita moschata (Rifu)cmolsiB797
Lsi09G014690CmoCh17G003430Cucurbita moschata (Rifu)cmolsiB320
Lsi09G014690Cla009266Watermelon (97103) v1lsiwmB040
Lsi09G014690MELO3C021287Melon (DHL92) v3.5.1lsimeB017
Lsi09G014690ClCG06G004780Watermelon (Charleston Gray)lsiwcgB029
Lsi09G014690MELO3C021287.2Melon (DHL92) v3.6.1lsimedB019
Lsi09G014690Cla97C06G114240Watermelon (97103) v2lsiwmbB026
Lsi09G014690Bhi12G001700Wax gourdlsiwgoB012
Lsi09G014690Cp4.1LG17g00450Cucurbita pepo (Zucchini)cpelsiB247
Lsi09G014690Cp4.1LG12g03060Cucurbita pepo (Zucchini)cpelsiB101
Lsi09G014690CsGy6G016690Cucumber (Gy14) v2cgyblsiB367
Lsi09G014690Carg05531Silver-seed gourdcarlsiB061
Lsi09G014690Carg18870Silver-seed gourdcarlsiB641
Lsi09G014690CsaV3_6G022570Cucumber (Chinese Long) v3cuclsiB425
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi09G014690Cucumber (Gy14) v1cgylsiB099
Lsi09G014690Cucumber (Gy14) v1cgylsiB412
Lsi09G014690Cucurbita maxima (Rimu)cmalsiB225
Lsi09G014690Cucurbita maxima (Rimu)cmalsiB708
Lsi09G014690Cucurbita maxima (Rimu)cmalsiB741
Lsi09G014690Cucurbita moschata (Rifu)cmolsiB213
Lsi09G014690Cucurbita moschata (Rifu)cmolsiB702
Lsi09G014690Cucurbita pepo (Zucchini)cpelsiB484
Lsi09G014690Cucurbita pepo (Zucchini)cpelsiB697
Lsi09G014690Wild cucumber (PI 183967)cpilsiB087
Lsi09G014690Wild cucumber (PI 183967)cpilsiB149
Lsi09G014690Cucumber (Chinese Long) v2culsiB150
Lsi09G014690Cucumber (Chinese Long) v2culsiB089
Lsi09G014690Melon (DHL92) v3.5.1lsimeB029
Lsi09G014690Watermelon (Charleston Gray)lsiwcgB013
Lsi09G014690Watermelon (Charleston Gray)lsiwcgB017
Lsi09G014690Watermelon (97103) v1lsiwmB017
Lsi09G014690Watermelon (97103) v1lsiwmB035
Lsi09G014690Cucumber (Gy14) v2cgyblsiB082
Lsi09G014690Cucumber (Gy14) v2cgyblsiB136
Lsi09G014690Melon (DHL92) v3.6.1lsimedB032
Lsi09G014690Melon (DHL92) v3.6.1lsimedB042
Lsi09G014690Silver-seed gourdcarlsiB252
Lsi09G014690Cucumber (Chinese Long) v3cuclsiB100
Lsi09G014690Cucumber (Chinese Long) v3cuclsiB163
Lsi09G014690Cucumber (Chinese Long) v3cuclsiB265
Lsi09G014690Watermelon (97103) v2lsiwmbB011
Lsi09G014690Watermelon (97103) v2lsiwmbB015
Lsi09G014690Wax gourdlsiwgoB038
Lsi09G014690Wax gourdlsiwgoB041
Lsi09G014690Bottle gourd (USVL1VR-Ls)lsilsiB002
Lsi09G014690Bottle gourd (USVL1VR-Ls)lsilsiB006