ClCG09G005290 (gene) Watermelon (Charleston Gray)

Overview
NameClCG09G005290
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionZinc finger protein 6
LocationCG_Chr09 : 4678197 .. 4678706 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAATCAAAACCCCTCCTCTTCCATTCTAAAGATTTTCGGCTTCCCATTGGTCGAGCCCGACGACAATCCGCCGGAGACACCCGACGCCGTCGACACCAAATCCAACGACGACAGAAAGTTCCGCTGCCAATTCTGCCGCCGAGTTTTCGCCAATTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCTCTTTATTTTCATGCCGCCGCACCCCGACCGCCGTCGCTTTGCTCCAGCGTTTTCCCGGCCAACATTGGTGGCGGCGGCGGTGGTGGTGGTTCTAGAATTCTGCCTCGGAACGGTAACGGCTATTTTGCGGCGGGGGCGTACGGTCGCGTATCGGCGTCATCAGGGCGTTGGATGTTTGGGAATTCGGGTGAAGGAAAAAGGGAAAATTCAGGGTGTAAATTGGGAGGTGAAAAGGGATTATGTGTTGATCTTCATCTTAAACTTTCTCCATCTAATTCATCAAATTAA

mRNA sequence

ATGTCCAATCAAAACCCCTCCTCTTCCATTCTAAAGATTTTCGGCTTCCCATTGGTCGAGCCCGACGACAATCCGCCGGAGACACCCGACGCCGTCGACACCAAATCCAACGACGACAGAAAGTTCCGCTGCCAATTCTGCCGCCGAGTTTTCGCCAATTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCTCTTTATTTTCATGCCGCCGCACCCCGACCGCCGTCGCTTTGCTCCAGCGTTTTCCCGGCCAACATTGGTGGCGGCGGCGGTGGTGGTGGTTCTAGAATTCTGCCTCGGAACGGTAACGGCTATTTTGCGGCGGGGGCGTACGGTCGCGTATCGGCGTCATCAGGGCGTTGGATGTTTGGGAATTCGGGTGAAGGAAAAAGGGAAAATTCAGGGTGTAAATTGGGAGGTGAAAAGGGATTATGTGTTGATCTTCATCTTAAACTTTCTCCATCTAATTCATCAAATTAA

Coding sequence (CDS)

ATGTCCAATCAAAACCCCTCCTCTTCCATTCTAAAGATTTTCGGCTTCCCATTGGTCGAGCCCGACGACAATCCGCCGGAGACACCCGACGCCGTCGACACCAAATCCAACGACGACAGAAAGTTCCGCTGCCAATTCTGCCGCCGAGTTTTCGCCAATTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCTCTTTATTTTCATGCCGCCGCACCCCGACCGCCGTCGCTTTGCTCCAGCGTTTTCCCGGCCAACATTGGTGGCGGCGGCGGTGGTGGTGGTTCTAGAATTCTGCCTCGGAACGGTAACGGCTATTTTGCGGCGGGGGCGTACGGTCGCGTATCGGCGTCATCAGGGCGTTGGATGTTTGGGAATTCGGGTGAAGGAAAAAGGGAAAATTCAGGGTGTAAATTGGGAGGTGAAAAGGGATTATGTGTTGATCTTCATCTTAAACTTTCTCCATCTAATTCATCAAATTAA

Protein sequence

MSNQNPSSSILKIFGFPLVEPDDNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHAAAPRPPSLCSSVFPANIGGGGGGGGSRILPRNGNGYFAAGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCVDLHLKLSPSNSSN
Homology
[Close]
BLAST of ClCG09G005290 vs. Swiss-Prot
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 69/195 (35.38%), Postives = 85/195 (43.59%), Query Frame = 1 

Query: 8   SSILKIFGFPLVEPDD--NPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQNAHK 67
           +S LK+FG  L+E     N    P       ++ RK+ CQ+C R FANSQALGGHQNAHK
Sbjct: 5   TSSLKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHK 64

Query: 68  RERQRAKRALY-----------FH--------AAAPRPPSLCSSVFPANIGGGGGGGGSR 127
           +ERQ  KRA             FH        A AP P  L     P ++        S+
Sbjct: 65  KERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHPPPHMMLSPSSSSSK 124

Query: 128 IL------PRNGNGYF--AAGAYG---RVSASSGRWMFGNSGEGKR------ENSGCKLG 165
            L       +N  GYF    G YG      A   +   G+  E +R       +SG KL 
Sbjct: 125 WLYGEHMSSQNAVGYFHGGRGLYGGGMESMAGEVKTHGGSLPEMRRFAGDSDRSSGIKL- 184

[Close]
BLAST of ClCG09G005290 vs. Swiss-Prot
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-10
Identity = 33/66 (50.00%), Postives = 36/66 (54.55%), Query Frame = 1 

Query: 23  DNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR---ALYFHA 82
           D   E     D  +N++R+F C +C R F  SQALGGHQNAHKRERQ AKR     Y H 
Sbjct: 76  DKDKEKDKDKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHH 135

Query: 83  AAPRPP 86
             P  P
Sbjct: 136 HQPHDP 141

[Close]
BLAST of ClCG09G005290 vs. Swiss-Prot
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.5e-10
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1 

Query: 2  SNQNPSSSILKIFGFPLVEPDDNPP-ETPDAVDTKSNDD-----RKFRCQFCRRVFANSQ 61
          S+ + S   +K+FGF L+     P   T ++V + +N       ++  CQ+C + FANSQ
Sbjct: 14 SSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQ 73

Query: 62 ALGGHQNAHKRERQRAKR 74
          ALGGHQNAHK+ER + KR
Sbjct: 74 ALGGHQNAHKKERLKKKR 91

[Close]
BLAST of ClCG09G005290 vs. Swiss-Prot
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 1 

Query: 5  NPSSSILKIFGFPL------VEPDDNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALG 64
          +P    +++FGF         E  DN  E  +++    N +++F+C +C R F  SQALG
Sbjct: 13 SPKERPIRLFGFEFGASHEESESKDNYNENNESIKD-DNKEKRFKCHYCFRNFPTSQALG 72

Query: 65 GHQNAHKRERQRAKR-ALYFHAAA 82
          GHQNAHKRERQ+ KR  L+ +AAA
Sbjct: 73 GHQNAHKRERQQTKRFNLHSNAAA 95

[Close]
BLAST of ClCG09G005290 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 43/113 (38.05%), Postives = 56/113 (49.56%), Query Frame = 1 

Query: 20  EPDDNPPETPD-AVDTKS-NDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL-- 79
           E ++   +T D + D  S + +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  
Sbjct: 67  EEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSS 126

Query: 80  YFHAAAPRP------PSLCSSVFPANIGGGGGGGGSRILPRNGNGYFAAGAYG 123
           YF+     P      PS  +    A    GG   G +      +GY+   +YG
Sbjct: 127 YFYHPDNNPYSYRHYPSWTNGPLTAARSYGGFSSGPK-----PSGYYTRPSYG 174

[Close]
BLAST of ClCG09G005290 vs. TrEMBL
Match: A0A0A0K5R1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G406990 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.5e-69
Identity = 144/175 (82.29%), Postives = 146/175 (83.43%), Query Frame = 1 

Query: 1   MSNQNPSSSILKIFGFPLVEPDDNPPETPD----AVDTKSNDDRKFRCQFCRRVFANSQA 60
           MSN NPSS ILK+FGFPLVE DDNPPETPD    A  T S DDRKFRCQFCRRVFANSQA
Sbjct: 1   MSNHNPSS-ILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQA 60

Query: 61  LGGHQNAHKRERQRAKRALYFHAAAPRPPSLCSSVFPANIGGGGGGGGSRILPR--NGNG 120
           LGGHQNAHKRERQRAKRALYFHAAA RPPSL SSVFP+NI  GG GG SRIL R  N NG
Sbjct: 61  LGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNI--GGDGGASRILHRNNNSNG 120

Query: 121 YFA-AGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCVDLHLKLSPSNSS 169
           YF    AYG VSASSGRWMFGNS EG  ENSGCKLGGEKGLCVDLHLKLSPSNSS
Sbjct: 121 YFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSS 172

[Close]
BLAST of ClCG09G005290 vs. TrEMBL
Match: F6H746_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-18
Identity = 76/192 (39.58%), Postives = 97/192 (50.52%), Query Frame = 1 

Query: 2   SNQNPSSSILKIFGFPLVEPDDNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQ 61
           S+ + SSS++K+FGFP+ E D+  P TP    +   D RKF CQ+CRR FANSQALGGHQ
Sbjct: 28  SSSSSSSSVMKLFGFPVTEADE-APLTP----SNDADIRKFECQYCRREFANSQALGGHQ 87

Query: 62  NAHKRERQRAKRALY-------FHAAAPRPPSLCSSVFPANIGGGGGGGGSR-------- 121
           NAHK+ERQRAKRA +       F AA P   +      P    GG    GS         
Sbjct: 88  NAHKKERQRAKRAQFQTDHHRRFAAAVPILTAHAVRSGPFICAGGSSSMGSAARFRSSPE 147

Query: 122 ----------ILPRNGNGYFAAGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCV 169
                     +LP    G       GR     GR M  + G G+  + G ++       V
Sbjct: 148 CCVWSPGPPPMLPAPSAGVPYCFYLGR---QQGRPM--SVGPGELGHGGGEVSERAD--V 207

[Close]
BLAST of ClCG09G005290 vs. TrEMBL
Match: A0A061DR16_THECC (Zinc finger protein 6, putative OS=Theobroma cacao GN=TCM_004765 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-15
Identity = 74/188 (39.36%), Postives = 89/188 (47.34%), Query Frame = 1 

Query: 2   SNQNPSSSILKIFGFPLVEPDDNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQ 61
           S+Q PSSS LK+FGF L E D    E  +  +    + RKF C FC RVFANSQALGGHQ
Sbjct: 21  SDQKPSSS-LKLFGFSLTEQD----EILEKAEEDFGESRKFECPFCHRVFANSQALGGHQ 80

Query: 62  NAHKRERQRAKRA--------------LYFHAAAPRPPSLCSSVFPANIGGGGGG----- 121
           NAHKRERQRA+RA              L  HA    PP     +FP+ +     G     
Sbjct: 81  NAHKRERQRARRAQFNSHQRYIAAAPVLSSHAVRSMPP-----MFPSGLSSNSTGKFVSQ 140

Query: 122 -----GGSRILPRNGNGYFAAGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCVD 166
                    +LP   + Y       R+  +        +     E SG KL  E  + VD
Sbjct: 141 PGYCPSRPLLLPSTPSQY-----PPRIYIAQPLHFATVADSSFTEFSG-KL-PEADIGVD 191

[Close]
BLAST of ClCG09G005290 vs. TrEMBL
Match: B9RNH9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1348010 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.7e-15
Identity = 66/185 (35.68%), Postives = 92/185 (49.73%), Query Frame = 1 

Query: 2   SNQNPSSSILKIFGFPLVEPDDNPPETPDAVDTK--SNDDRKFRCQFCRRVFANSQALGG 61
           S+  PSS+ LK+FGF L+E + +  ++ +   +   S + RKF C FC R FANSQALGG
Sbjct: 12  SHHKPSSA-LKLFGFTLIEHEQDVAKSGETTSSNCSSVEIRKFECHFCGRAFANSQALGG 71

Query: 62  HQNAHKRERQRAKRALYF--------------HAAAPRPPS-LCSSVFPANIGGGGGGGG 121
           HQNAHKRERQRA+RA Y               HA    P S +CS+   ++     G   
Sbjct: 72  HQNAHKRERQRARRAQYHCDRRLMAAAPVVSSHAMKATPNSTICSAGLISSSDHFAGAKL 131

Query: 122 SRILPRNGNG----YFAAGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCVDLHL 166
               P NG      +  + A  R+       +   S     E +  KL  ++ + +DL L
Sbjct: 132 RPPQPSNGQARPLLFAPSSAASRIYVGPPLRLAATSMPSFAEFNPAKLLSDQEVEIDLCL 191

[Close]
BLAST of ClCG09G005290 vs. TrEMBL
Match: V7CYJ0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G211400g PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.7e-15
Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = 1 

Query: 3  NQNPSSSILKIFGFPLVEPDDNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQN 62
          N    SS  K+FGFPL E ++      D       +DRKFRC +C+RVFANSQALGGHQN
Sbjct: 4  NHKTKSSAPKLFGFPLTELEEFAERKYDV-----GEDRKFRCHYCKRVFANSQALGGHQN 63

Query: 63 AHKRERQRAKR-ALYFHAAAPRPPSLCS 90
          AHK+ERQRA+R  ++ H  +  PPS  S
Sbjct: 64 AHKKERQRARRFQIHHHRRSSVPPSSAS 86

[Close]
BLAST of ClCG09G005290 vs. TAIR10
Match: AT1G67030.1 (AT1G67030.1 zinc finger protein 6)

HSP 1 Score: 77.8 bits (190), Expect = 7.2e-15
Identity = 69/195 (35.38%), Postives = 85/195 (43.59%), Query Frame = 1 

Query: 8   SSILKIFGFPLVEPDD--NPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQNAHK 67
           +S LK+FG  L+E     N    P       ++ RK+ CQ+C R FANSQALGGHQNAHK
Sbjct: 5   TSSLKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHK 64

Query: 68  RERQRAKRALY-----------FH--------AAAPRPPSLCSSVFPANIGGGGGGGGSR 127
           +ERQ  KRA             FH        A AP P  L     P ++        S+
Sbjct: 65  KERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHPPPHMMLSPSSSSSK 124

Query: 128 IL------PRNGNGYF--AAGAYG---RVSASSGRWMFGNSGEGKR------ENSGCKLG 165
            L       +N  GYF    G YG      A   +   G+  E +R       +SG KL 
Sbjct: 125 WLYGEHMSSQNAVGYFHGGRGLYGGGMESMAGEVKTHGGSLPEMRRFAGDSDRSSGIKL- 184

[Close]
BLAST of ClCG09G005290 vs. TAIR10
Match: AT2G41940.1 (AT2G41940.1 zinc finger protein 8)

HSP 1 Score: 65.9 bits (159), Expect = 2.8e-11
Identity = 33/66 (50.00%), Postives = 36/66 (54.55%), Query Frame = 1 

Query: 23  DNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR---ALYFHA 82
           D   E     D  +N++R+F C +C R F  SQALGGHQNAHKRERQ AKR     Y H 
Sbjct: 76  DKDKEKDKDKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHH 135

Query: 83  AAPRPP 86
             P  P
Sbjct: 136 HQPHDP 141

[Close]
BLAST of ClCG09G005290 vs. TAIR10
Match: AT1G10480.1 (AT1G10480.1 zinc finger protein 5)

HSP 1 Score: 65.5 bits (158), Expect = 3.7e-11
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1 

Query: 2  SNQNPSSSILKIFGFPLVEPDDNPP-ETPDAVDTKSNDD-----RKFRCQFCRRVFANSQ 61
          S+ + S   +K+FGF L+     P   T ++V + +N       ++  CQ+C + FANSQ
Sbjct: 14 SSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQ 73

Query: 62 ALGGHQNAHKRERQRAKR 74
          ALGGHQNAHK+ER + KR
Sbjct: 74 ALGGHQNAHKKERLKKKR 91

[Close]
BLAST of ClCG09G005290 vs. TAIR10
Match: AT5G06650.1 (AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 6.3e-11
Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 1 

Query: 5  NPSSSILKIFGFPL------VEPDDNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALG 64
          +P    +++FGF         E  DN  E  +++    N +++F+C +C R F  SQALG
Sbjct: 13 SPKERPIRLFGFEFGASHEESESKDNYNENNESIKD-DNKEKRFKCHYCFRNFPTSQALG 72

Query: 65 GHQNAHKRERQRAKR-ALYFHAAA 82
          GHQNAHKRERQ+ KR  L+ +AAA
Sbjct: 73 GHQNAHKRERQQTKRFNLHSNAAA 95

[Close]
BLAST of ClCG09G005290 vs. TAIR10
Match: AT3G58070.1 (AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 43/113 (38.05%), Postives = 56/113 (49.56%), Query Frame = 1 

Query: 20  EPDDNPPETPD-AVDTKS-NDDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL-- 79
           E ++   +T D + D  S + +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  
Sbjct: 67  EEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSS 126

Query: 80  YFHAAAPRP------PSLCSSVFPANIGGGGGGGGSRILPRNGNGYFAAGAYG 123
           YF+     P      PS  +    A    GG   G +      +GY+   +YG
Sbjct: 127 YFYHPDNNPYSYRHYPSWTNGPLTAARSYGGFSSGPK-----PSGYYTRPSYG 174

[Close]
BLAST of ClCG09G005290 vs. NCBI nr
Match: gi|659101532|ref|XP_008451655.1| (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 6.2e-77
Identity = 151/175 (86.29%), Postives = 154/175 (88.00%), Query Frame = 1 

Query: 1   MSNQNPSSSILKIFGFPLVEPDDNPPETPDAV----DT--KSNDDRKFRCQFCRRVFANS 60
           MSN NPSS ILK+FGFPLVE DDNPPETPD V    DT   S+DDRKFRCQFCRRVFANS
Sbjct: 1   MSNHNPSS-ILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANS 60

Query: 61  QALGGHQNAHKRERQRAKRALYFHAAAPRPPSLCSSVFPANIGGGGGGGGSRILPRNGNG 120
           QALGGHQNAHKRERQRAKRALYFHAAA RPPSL SSVFP+N GG GGGGGSRILPRNGNG
Sbjct: 61  QALGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNFGGDGGGGGSRILPRNGNG 120

Query: 121 YFA-AGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCVDLHLKLSPSNSS 169
           YFA   AYG VSASSGRWMFGNS EGK ENSGCKLGGEKGLCVDLHLKLSPSNSS
Sbjct: 121 YFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGLCVDLHLKLSPSNSS 174

[Close]
BLAST of ClCG09G005290 vs. NCBI nr
Match: gi|778730418|ref|XP_011659780.1| (PREDICTED: zinc finger protein 6-like [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 2.1e-69
Identity = 144/175 (82.29%), Postives = 146/175 (83.43%), Query Frame = 1 

Query: 1   MSNQNPSSSILKIFGFPLVEPDDNPPETPD----AVDTKSNDDRKFRCQFCRRVFANSQA 60
           MSN NPSS ILK+FGFPLVE DDNPPETPD    A  T S DDRKFRCQFCRRVFANSQA
Sbjct: 1   MSNHNPSS-ILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQA 60

Query: 61  LGGHQNAHKRERQRAKRALYFHAAAPRPPSLCSSVFPANIGGGGGGGGSRILPR--NGNG 120
           LGGHQNAHKRERQRAKRALYFHAAA RPPSL SSVFP+NI  GG GG SRIL R  N NG
Sbjct: 61  LGGHQNAHKRERQRAKRALYFHAAALRPPSLYSSVFPSNI--GGDGGASRILHRNNNSNG 120

Query: 121 YFA-AGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCVDLHLKLSPSNSS 169
           YF    AYG VSASSGRWMFGNS EG  ENSGCKLGGEKGLCVDLHLKLSPSNSS
Sbjct: 121 YFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGLCVDLHLKLSPSNSS 172

[Close]
BLAST of ClCG09G005290 vs. NCBI nr
Match: gi|731388268|ref|XP_010649539.1| (PREDICTED: zinc finger protein 6-like [Vitis vinifera])

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-18
Identity = 76/192 (39.58%), Postives = 97/192 (50.52%), Query Frame = 1 

Query: 2   SNQNPSSSILKIFGFPLVEPDDNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQ 61
           S+ + SSS++K+FGFP+ E D+  P TP    +   D RKF CQ+CRR FANSQALGGHQ
Sbjct: 57  SSSSSSSSVMKLFGFPVTEADE-APLTP----SNDADIRKFECQYCRREFANSQALGGHQ 116

Query: 62  NAHKRERQRAKRALY-------FHAAAPRPPSLCSSVFPANIGGGGGGGGSR-------- 121
           NAHK+ERQRAKRA +       F AA P   +      P    GG    GS         
Sbjct: 117 NAHKKERQRAKRAQFQTDHHRRFAAAVPILTAHAVRSGPFICAGGSSSMGSAARFRSSPE 176

Query: 122 ----------ILPRNGNGYFAAGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCV 169
                     +LP    G       GR     GR M  + G G+  + G ++       V
Sbjct: 177 CCVWSPGPPPMLPAPSAGVPYCFYLGR---QQGRPM--SVGPGELGHGGGEVSERAD--V 236

[Close]
BLAST of ClCG09G005290 vs. NCBI nr
Match: gi|590719449|ref|XP_007051057.1| (Zinc finger protein 6, putative [Theobroma cacao])

HSP 1 Score: 90.5 bits (223), Expect = 3.0e-15
Identity = 74/188 (39.36%), Postives = 89/188 (47.34%), Query Frame = 1 

Query: 2   SNQNPSSSILKIFGFPLVEPDDNPPETPDAVDTKSNDDRKFRCQFCRRVFANSQALGGHQ 61
           S+Q PSSS LK+FGF L E D    E  +  +    + RKF C FC RVFANSQALGGHQ
Sbjct: 21  SDQKPSSS-LKLFGFSLTEQD----EILEKAEEDFGESRKFECPFCHRVFANSQALGGHQ 80

Query: 62  NAHKRERQRAKRA--------------LYFHAAAPRPPSLCSSVFPANIGGGGGG----- 121
           NAHKRERQRA+RA              L  HA    PP     +FP+ +     G     
Sbjct: 81  NAHKRERQRARRAQFNSHQRYIAAAPVLSSHAVRSMPP-----MFPSGLSSNSTGKFVSQ 140

Query: 122 -----GGSRILPRNGNGYFAAGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCVD 166
                    +LP   + Y       R+  +        +     E SG KL  E  + VD
Sbjct: 141 PGYCPSRPLLLPSTPSQY-----PPRIYIAQPLHFATVADSSFTEFSG-KL-PEADIGVD 191

[Close]
BLAST of ClCG09G005290 vs. NCBI nr
Match: gi|255548523|ref|XP_002515318.1| (PREDICTED: zinc finger protein JAGGED [Ricinus communis])

HSP 1 Score: 89.4 bits (220), Expect = 6.7e-15
Identity = 66/185 (35.68%), Postives = 92/185 (49.73%), Query Frame = 1 

Query: 2   SNQNPSSSILKIFGFPLVEPDDNPPETPDAVDTK--SNDDRKFRCQFCRRVFANSQALGG 61
           S+  PSS+ LK+FGF L+E + +  ++ +   +   S + RKF C FC R FANSQALGG
Sbjct: 12  SHHKPSSA-LKLFGFTLIEHEQDVAKSGETTSSNCSSVEIRKFECHFCGRAFANSQALGG 71

Query: 62  HQNAHKRERQRAKRALYF--------------HAAAPRPPS-LCSSVFPANIGGGGGGGG 121
           HQNAHKRERQRA+RA Y               HA    P S +CS+   ++     G   
Sbjct: 72  HQNAHKRERQRARRAQYHCDRRLMAAAPVVSSHAMKATPNSTICSAGLISSSDHFAGAKL 131

Query: 122 SRILPRNGNG----YFAAGAYGRVSASSGRWMFGNSGEGKRENSGCKLGGEKGLCVDLHL 166
               P NG      +  + A  R+       +   S     E +  KL  ++ + +DL L
Sbjct: 132 RPPQPSNGQARPLLFAPSSAASRIYVGPPLRLAATSMPSFAEFNPAKLLSDQEVEIDLCL 191

The following BLAST results are available for this feature:
BLAST of ClCG09G005290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP6_ARATH1.3e-1335.38Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1[more]
ZFP8_ARATH5.0e-1050.00Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1[more]
ZFP5_ARATH6.5e-1042.31Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1[more]
GIS2_ARATH1.1e-0942.86Zinc finger protein GIS2 OS=Arabidopsis thaliana GN=GIS2 PE=2 SV=1[more]
GIS_ARATH1.9e-0938.05Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1[more]
BLAST of ClCG09G005290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5R1_CUCSA1.5e-6982.29Uncharacterized protein OS=Cucumis sativus GN=Csa_7G406990 PE=4 SV=1[more]
F6H746_VITVI2.7e-1839.58Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01390 PE=4 SV=... [more]
A0A061DR16_THECC2.1e-1539.36Zinc finger protein 6, putative OS=Theobroma cacao GN=TCM_004765 PE=4 SV=1[more]
B9RNH9_RICCO4.7e-1535.68Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1348010 PE=4 SV=1[more]
V7CYJ0_PHAVU4.7e-1552.27Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G211400g PE=4 SV=1[more]
BLAST of ClCG09G005290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67030.17.2e-1535.38 zinc finger protein 6[more]
AT2G41940.12.8e-1150.00 zinc finger protein 8[more]
AT1G10480.13.7e-1142.31 zinc finger protein 5[more]
AT5G06650.16.3e-1142.86 C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G58070.11.1e-1038.05 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of ClCG09G005290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101532|ref|XP_008451655.1|6.2e-7786.29PREDICTED: zinc finger protein 6-like [Cucumis melo][more]
gi|778730418|ref|XP_011659780.1|2.1e-6982.29PREDICTED: zinc finger protein 6-like [Cucumis sativus][more]
gi|731388268|ref|XP_010649539.1|3.8e-1839.58PREDICTED: zinc finger protein 6-like [Vitis vinifera][more]
gi|590719449|ref|XP_007051057.1|3.0e-1539.36Zinc finger protein 6, putative [Theobroma cacao][more]
gi|255548523|ref|XP_002515318.1|6.7e-1535.68PREDICTED: zinc finger protein JAGGED [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0001101 response to acid chemical
biological_process GO:1901700 response to oxygen-containing compound
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G005290.1ClCG09G005290.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 44..64
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 42..69
score: 11
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 38..68
score: 3.
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 38..69
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG09G005290Csa7G406990Cucumber (Chinese Long) v2cuwcgB526
ClCG09G005290MELO3C015943Melon (DHL92) v3.5.1mewcgB162
ClCG09G005290Cla015120Watermelon (97103) v1wcgwmB007
ClCG09G005290Cla97C09G167760Watermelon (97103) v2wcgwmbB035
ClCG09G005290Cla97C06G114240Watermelon (97103) v2wcgwmbB025
ClCG09G005290Bhi09G000786Wax gourdwcgwgoB069
ClCG09G005290CSPI06G17200Wild cucumber (PI 183967)cpiwcgB437
ClCG09G005290CSPI07G17960Wild cucumber (PI 183967)cpiwcgB555
ClCG09G005290Cucsa.205210Cucumber (Gy14) v1cgywcgB379
ClCG09G005290CmaCh17G010500Cucurbita maxima (Rimu)cmawcgB306
ClCG09G005290CmoCh08G004430Cucurbita moschata (Rifu)cmowcgB785
ClCG09G005290CmoCh17G003430Cucurbita moschata (Rifu)cmowcgB306
ClCG09G005290CmoCh17G010230Cucurbita moschata (Rifu)cmowcgB299
ClCG09G005290Lsi02G024520Bottle gourd (USVL1VR-Ls)lsiwcgB159
ClCG09G005290Cp4.1LG17g07260Cucurbita pepo (Zucchini)cpewcgB280
ClCG09G005290CsGy6G016690Cucumber (Gy14) v2cgybwcgB385
ClCG09G005290MELO3C015943.2Melon (DHL92) v3.6.1medwcgB155
ClCG09G005290Carg13368Silver-seed gourdcarwcgB0442
ClCG09G005290Carg07141Silver-seed gourdcarwcgB0108
ClCG09G005290CsaV3_7G029780Cucumber (Chinese Long) v3cucwcgB548
ClCG09G005290CsaV3_6G022570Cucumber (Chinese Long) v3cucwcgB439
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG09G005290ClCG06G004780Watermelon (Charleston Gray)wcgwcgB029
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG09G005290Cucumber (Gy14) v2cgybwcgB486
ClCG09G005290Melon (DHL92) v3.6.1medwcgB440
ClCG09G005290Silver-seed gourdcarwcgB0441
ClCG09G005290Silver-seed gourdcarwcgB0735
ClCG09G005290Silver-seed gourdcarwcgB0791
ClCG09G005290Cucumber (Chinese Long) v3cucwcgB277
ClCG09G005290Watermelon (97103) v2wcgwmbB009
ClCG09G005290Wax gourdwcgwgoB011
ClCG09G005290Watermelon (Charleston Gray)wcgwcgB006
ClCG09G005290Cucumber (Gy14) v1cgywcgB110
ClCG09G005290Cucurbita maxima (Rimu)cmawcgB219
ClCG09G005290Cucurbita maxima (Rimu)cmawcgB377
ClCG09G005290Cucurbita maxima (Rimu)cmawcgB785
ClCG09G005290Cucurbita maxima (Rimu)cmawcgB786
ClCG09G005290Cucurbita moschata (Rifu)cmowcgB204
ClCG09G005290Cucurbita moschata (Rifu)cmowcgB375
ClCG09G005290Wild cucumber (PI 183967)cpiwcgB278
ClCG09G005290Cucumber (Chinese Long) v2cuwcgB269
ClCG09G005290Melon (DHL92) v3.5.1mewcgB446
ClCG09G005290Watermelon (97103) v1wcgwmB016
ClCG09G005290Cucurbita pepo (Zucchini)cpewcgB126
ClCG09G005290Cucurbita pepo (Zucchini)cpewcgB485
ClCG09G005290Bottle gourd (USVL1VR-Ls)lsiwcgB217