CmoCh16G003360 (gene) Cucurbita moschata (Rifu)

NameCmoCh16G003360
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTrypsin inhibitor 1
LocationCmo_Chr16 : 1563756 .. 1563995 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTGGAAAAGAGGTGCTTTAATTGCCATGGTGGGGCTGTTGCTGATGGCGGCTTTTGCAGAGTCCGCCGCCGTCCATGGCGGCGAAGTGATTCAGCTAGTTTCCGACGGAGTGAATGATTTCCCAAGGAAGATGATGAACGGTGCCCGAGGTTGCCCTAGAATCCTTATGGAGTGCGAAGTGGATTCCGACTGCCTTCCTGGTTGCATATGCCGGCCCAACGGCTTCTGTGGTTGA

mRNA sequence

ATGGAGTGGAAAAGAGGTGCTTTAATTGCCATGGTGGGGCTGTTGCTGATGGCGGCTTTTGCAGAGTCCGCCGCCGTCCATGGCGGCGAAGTGATTCAGCTAGTTTCCGACGGAGTGAATGATTTCCCAAGGAAGATGATGAACGGTGCCCGAGGTTGCCCTAGAATCCTTATGGAGTGCGAAGTGGATTCCGACTGCCTTCCTGGTTGCATATGCCGGCCCAACGGCTTCTGTGGTTGA

Coding sequence (CDS)

ATGGAGTGGAAAAGAGGTGCTTTAATTGCCATGGTGGGGCTGTTGCTGATGGCGGCTTTTGCAGAGTCCGCCGCCGTCCATGGCGGCGAAGTGATTCAGCTAGTTTCCGACGGAGTGAATGATTTCCCAAGGAAGATGATGAACGGTGCCCGAGGTTGCCCTAGAATCCTTATGGAGTGCGAAGTGGATTCCGACTGCCTTCCTGGTTGCATATGCCGGCCCAACGGCTTCTGTGGTTGA
BLAST of CmoCh16G003360 vs. Swiss-Prot
Match: ITR1_TRIKI (Trypsin inhibitor 1 OS=Trichosanthes kirilowii PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-16
Identity = 41/65 (63.08%), Postives = 46/65 (70.77%), Query Frame = 1

Query: 17 MAAFAESAAVHGG--EVIQLVSDGVNDFPRKMMNGARGCPRILMECEVDSDCLPGCICRP 76
          MAAF ESA    G  EVIQLVSDGVN++  KMM G   CPRILM C+V+ DCL GC C  
Sbjct: 1  MAAFVESARAGAGADEVIQLVSDGVNEYSEKMMEGVVACPRILMPCKVNDDCLRGCKCLS 60

Query: 77 NGFCG 80
          NG+CG
Sbjct: 61 NGYCG 65

BLAST of CmoCh16G003360 vs. Swiss-Prot
Match: ITR5_LUFAE (Trypsin inhibitor 5 OS=Luffa aegyptiaca PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-13
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1

Query: 17 MAAFAESAAVHGGEVIQLVSDGVNDFPRKMMNGARG--CPRILMECEVDSDCLPGCICRP 76
          MA+ AES+ V   EVI+L+SDG ND PRK+M+G  G  CPRILM C+ D DC+  C C  
Sbjct: 1  MASVAESSGVV--EVIELISDGGNDLPRKIMSGRHGGICPRILMPCKTDDDCMLDCRCLS 60

Query: 77 NGFCG 80
          NG+CG
Sbjct: 61 NGYCG 63

BLAST of CmoCh16G003360 vs. Swiss-Prot
Match: ITR2_ECBEL (Trypsin inhibitor 2 OS=Ecballium elaterium PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 2.9e-08
Identity = 22/28 (78.57%), Postives = 24/28 (85.71%), Query Frame = 1

Query: 52 GCPRILMECEVDSDCLPGCICRPNGFCG 80
          GCPRILM C+ DSDCL GC+C PNGFCG
Sbjct: 1  GCPRILMRCKQDSDCLAGCVCGPNGFCG 28

BLAST of CmoCh16G003360 vs. Swiss-Prot
Match: ITR2_BRYDI (Trypsin inhibitor 2 OS=Bryonia dioica PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.4e-08
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 1

Query: 51 RGCPRILMECEVDSDCLPGCICRPNGFCG 80
          RGCPRILM C+ DSDCL GC+C+ NG+CG
Sbjct: 1  RGCPRILMRCKRDSDCLAGCVCQKNGYCG 29

BLAST of CmoCh16G003360 vs. Swiss-Prot
Match: ITR4_CYCPE (Trypsin inhibitor 4 OS=Cyclanthera pedata PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.2e-07
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = 1

Query: 51 RGCPRILMECEVDSDCLPGCICRPNGFCG 80
          R CPRILMEC+ DSDCL  CIC+ NGFCG
Sbjct: 1  RICPRILMECKADSDCLAQCICQENGFCG 29

BLAST of CmoCh16G003360 vs. TrEMBL
Match: A0A0A0KY34_CUCSA (Trypsin inhibitor 1 OS=Cucumis sativus GN=Csa_4G000810 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.5e-19
Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 1

Query: 1  MEWKRGALIAMVGLLLMAAFAESAAVH-GGEVIQLVSDGVNDFPRKM-MNGARGCPRILM 60
          MEWK+ AL+AM+G+LLMA F ES  +    E+IQLVSDGVN++ + +  + A GCPRILM
Sbjct: 1  MEWKKIALVAMMGMLLMATFTESVGLGVDEEIIQLVSDGVNEYSQNIGKDTAPGCPRILM 60

Query: 61 ECEVDSDCLPGCICRPNGFCG 80
          +C+ DSDC PGC C+P G+CG
Sbjct: 61 KCKTDSDCYPGCTCKPMGYCG 81

BLAST of CmoCh16G003360 vs. TrEMBL
Match: A0A0A0KT01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000805 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.1e-12
Identity = 42/82 (51.22%), Postives = 51/82 (62.20%), Query Frame = 1

Query: 1  MEWKRGALIAMVGLLLMAAFAES--AAVHGGEVIQLVSDGVNDFPRKMMN-GARGCPRIL 60
          MEWK+  ++A+VG+L+MAA  E   AA+    V  L     N+ PRKMMN   R CPRIL
Sbjct: 1  MEWKKIGMLAVVGMLVMAALVEDCHAAIESESVKGL---NKNELPRKMMNEETRMCPRIL 60

Query: 61 MECEVDSDCLPGCICRPNGFCG 80
           EC  D DC+  CIC  NGFCG
Sbjct: 61 EECTTDDDCMNDCICLSNGFCG 79

BLAST of CmoCh16G003360 vs. TrEMBL
Match: A0A0A7HIA9_9ROSI (TIPRE5 (Fragment) OS=Momordica friesiorum GN=TIPRE5 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-06
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1

Query: 10 AMVGLLLMAAFAESAAVHGGEVIQLVSDGVNDFPRKMMNGA------RGCPRILMECEVD 69
          A+V ++L+A  A+S   +GG+ I L+S+G     + + +G       R CP+IL  C  D
Sbjct: 3  ALVAMMLVATSADS---NGGDTIHLISNGRAQTGQDINSGGVYSEEQRACPKILKRCRRD 62

Query: 70 SDCLPGCICRPNGFCG 80
          SDC   C+C+ NG+CG
Sbjct: 63 SDCPGACVCQDNGYCG 75

BLAST of CmoCh16G003360 vs. TrEMBL
Match: A0A0A7HF87_9ROSI (TIPTOP4 protein OS=Momordica subangulata GN=TIPTOP4 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.2e-06
Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 1

Query: 1  MEWKRGALIAMVGLLLMAAFAESAAVHGGEVIQLVSDGVNDFPRKMMNGARGCPRILMEC 60
          ME K+  L+ +V ++L+A    S   + G+   L+SDG        +NG   CP+IL  C
Sbjct: 1  MESKKILLVVLVAMMLVAT---STCFNDGDTTDLISDGRAQMD---INGG-ACPKILQRC 60

Query: 61 EVDSDCLPGCICRPNGFCG 80
            DSDC   CICR NG+CG
Sbjct: 61 RRDSDCPSACICRGNGYCG 72

BLAST of CmoCh16G003360 vs. TrEMBL
Match: A0A0A7HG47_9ROSI (TIPRE1 (Fragment) OS=Momordica anigosantha GN=TIPRE1 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.1e-06
Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 1

Query: 14 LLLMAAFAESAAVHGGEVIQLVSDGVNDFPRKMMNGA------RGCPRILMECEVDSDCL 73
          L+ M   A SA  +GG+ I L+S+G     + + +G       R CP+IL  C  DSDC 
Sbjct: 4  LVAMMLVATSADFNGGDTIHLISNGRAQTGQDINSGGVYSEEQRACPKILKRCRRDSDCP 63

Query: 74 PGCICRPNGFCG 80
            C+C+ NG+CG
Sbjct: 64 GACVCQDNGYCG 75

BLAST of CmoCh16G003360 vs. NCBI nr
Match: gi|700197603|gb|KGN52761.1| (Trypsin inhibitor 1 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-18
Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 1

Query: 1  MEWKRGALIAMVGLLLMAAFAESAAVH-GGEVIQLVSDGVNDFPRKM-MNGARGCPRILM 60
          MEWK+ AL+AM+G+LLMA F ES  +    E+IQLVSDGVN++ + +  + A GCPRILM
Sbjct: 1  MEWKKIALVAMMGMLLMATFTESVGLGVDEEIIQLVSDGVNEYSQNIGKDTAPGCPRILM 60

Query: 61 ECEVDSDCLPGCICRPNGFCG 80
          +C+ DSDC PGC C+P G+CG
Sbjct: 61 KCKTDSDCYPGCTCKPMGYCG 81

BLAST of CmoCh16G003360 vs. NCBI nr
Match: gi|8134511|sp|Q43667.1|ITR1_TRIKI (RecName: Full=Trypsin inhibitor 1; AltName: Full=TTII; AltName: Full=Trypsin inhibitor I; Flags: Precursor)

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-14
Identity = 41/65 (63.08%), Postives = 46/65 (70.77%), Query Frame = 1

Query: 17 MAAFAESAAVHGG--EVIQLVSDGVNDFPRKMMNGARGCPRILMECEVDSDCLPGCICRP 76
          MAAF ESA    G  EVIQLVSDGVN++  KMM G   CPRILM C+V+ DCL GC C  
Sbjct: 1  MAAFVESARAGAGADEVIQLVSDGVNEYSEKMMEGVVACPRILMPCKVNDDCLRGCKCLS 60

Query: 77 NGFCG 80
          NG+CG
Sbjct: 61 NGYCG 65

BLAST of CmoCh16G003360 vs. NCBI nr
Match: gi|778697386|ref|XP_011654311.1| (PREDICTED: uncharacterized protein LOC105435333 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 7.3e-12
Identity = 42/82 (51.22%), Postives = 51/82 (62.20%), Query Frame = 1

Query: 1   MEWKRGALIAMVGLLLMAAFAES--AAVHGGEVIQLVSDGVNDFPRKMMN-GARGCPRIL 60
           MEWK+  ++A+VG+L+MAA  E   AA+    V  L     N+ PRKMMN   R CPRIL
Sbjct: 126 MEWKKIGMLAVVGMLVMAALVEDCHAAIESESVKGL---NKNELPRKMMNEETRMCPRIL 185

Query: 61  MECEVDSDCLPGCICRPNGFCG 80
            EC  D DC+  CIC  NGFCG
Sbjct: 186 EECTTDDDCMNDCICLSNGFCG 204

BLAST of CmoCh16G003360 vs. NCBI nr
Match: gi|700197602|gb|KGN52760.1| (hypothetical protein Csa_4G000805 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 7.3e-12
Identity = 42/82 (51.22%), Postives = 51/82 (62.20%), Query Frame = 1

Query: 1  MEWKRGALIAMVGLLLMAAFAES--AAVHGGEVIQLVSDGVNDFPRKMMN-GARGCPRIL 60
          MEWK+  ++A+VG+L+MAA  E   AA+    V  L     N+ PRKMMN   R CPRIL
Sbjct: 1  MEWKKIGMLAVVGMLVMAALVEDCHAAIESESVKGL---NKNELPRKMMNEETRMCPRIL 60

Query: 61 MECEVDSDCLPGCICRPNGFCG 80
           EC  D DC+  CIC  NGFCG
Sbjct: 61 EECTTDDDCMNDCICLSNGFCG 79

BLAST of CmoCh16G003360 vs. NCBI nr
Match: gi|462426|sp|P34950.1|ITR5_LUFAE (RecName: Full=Trypsin inhibitor 5; AltName: Full=TGT-II; AltName: Full=Trypsin inhibitor II; Flags: Precursor)

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-11
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1

Query: 17 MAAFAESAAVHGGEVIQLVSDGVNDFPRKMMNGARG--CPRILMECEVDSDCLPGCICRP 76
          MA+ AES+ V   EVI+L+SDG ND PRK+M+G  G  CPRILM C+ D DC+  C C  
Sbjct: 1  MASVAESSGVV--EVIELISDGGNDLPRKIMSGRHGGICPRILMPCKTDDDCMLDCRCLS 60

Query: 77 NGFCG 80
          NG+CG
Sbjct: 61 NGYCG 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ITR1_TRIKI2.2e-1663.08Trypsin inhibitor 1 OS=Trichosanthes kirilowii PE=3 SV=1[more]
ITR5_LUFAE1.3e-1356.92Trypsin inhibitor 5 OS=Luffa aegyptiaca PE=1 SV=1[more]
ITR2_ECBEL2.9e-0878.57Trypsin inhibitor 2 OS=Ecballium elaterium PE=1 SV=2[more]
ITR2_BRYDI6.4e-0872.41Trypsin inhibitor 2 OS=Bryonia dioica PE=1 SV=1[more]
ITR4_CYCPE3.2e-0775.86Trypsin inhibitor 4 OS=Cyclanthera pedata PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KY34_CUCSA9.5e-1958.02Trypsin inhibitor 1 OS=Cucumis sativus GN=Csa_4G000810 PE=3 SV=1[more]
A0A0A0KT01_CUCSA5.1e-1251.22Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000805 PE=3 SV=1[more]
A0A0A7HIA9_9ROSI3.2e-0638.16TIPRE5 (Fragment) OS=Momordica friesiorum GN=TIPRE5 PE=3 SV=1[more]
A0A0A7HF87_9ROSI3.2e-0640.51TIPTOP4 protein OS=Momordica subangulata GN=TIPTOP4 PE=3 SV=1[more]
A0A0A7HG47_9ROSI7.1e-0638.89TIPRE1 (Fragment) OS=Momordica anigosantha GN=TIPRE1 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700197603|gb|KGN52761.1|1.4e-1858.02Trypsin inhibitor 1 [Cucumis sativus][more]
gi|8134511|sp|Q43667.1|ITR1_TRIKI3.5e-1463.08RecName: Full=Trypsin inhibitor 1; AltName: Full=TTII; AltName: Full=Trypsin inh... [more]
gi|778697386|ref|XP_011654311.1|7.3e-1251.22PREDICTED: uncharacterized protein LOC105435333 [Cucumis sativus][more]
gi|700197602|gb|KGN52760.1|7.3e-1251.22hypothetical protein Csa_4G000805 [Cucumis sativus][more]
gi|462426|sp|P34950.1|ITR5_LUFAE2.1e-1156.92RecName: Full=Trypsin inhibitor 5; AltName: Full=TGT-II; AltName: Full=Trypsin i... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000737Prot_inh_squash
IPR011052Proteinase_amylase_inhib_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004867serine-type endopeptidase inhibitor activity
GO:0004866endopeptidase inhibitor activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010466 negative regulation of peptidase activity
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004867 serine-type endopeptidase inhibitor activity
molecular_function GO:0004866 endopeptidase inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G003360.1CmoCh16G003360.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000737Proteinase inhibitor I7, squashPFAMPF00299Squashcoord: 51..79
score: 5.3
IPR000737Proteinase inhibitor I7, squashPROSITEPS00286SQUASH_INHIBITORcoord: 53..72
scor
IPR011052Proteinase/amylase inhibitor domainunknownSSF57027Plant inhibitors of proteinases and amylasescoord: 50..79
score: 5.02
NoneNo IPR availableSMARTSM00286PTI_1coord: 51..79
score: 2.4

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G003360Cucurbita pepo (Zucchini)cmocpeB311
CmoCh16G003360Cucurbita pepo (Zucchini)cmocpeB321
CmoCh16G003360Bottle gourd (USVL1VR-Ls)cmolsiB291
CmoCh16G003360Bottle gourd (USVL1VR-Ls)cmolsiB298
CmoCh16G003360Cucumber (Gy14) v2cgybcmoB471
CmoCh16G003360Cucumber (Gy14) v2cgybcmoB732
CmoCh16G003360Melon (DHL92) v3.6.1cmomedB349
CmoCh16G003360Melon (DHL92) v3.6.1cmomedB317
CmoCh16G003360Melon (DHL92) v3.6.1cmomedB341
CmoCh16G003360Silver-seed gourdcarcmoB0258
CmoCh16G003360Silver-seed gourdcarcmoB0402
CmoCh16G003360Silver-seed gourdcarcmoB0509
CmoCh16G003360Cucumber (Chinese Long) v3cmocucB0369
CmoCh16G003360Cucumber (Chinese Long) v3cmocucB0391
CmoCh16G003360Cucumber (Chinese Long) v3cmocucB0408
CmoCh16G003360Cucumber (Chinese Long) v3cmocucB0409
CmoCh16G003360Watermelon (97103) v2cmowmbB316
CmoCh16G003360Watermelon (97103) v2cmowmbB333
CmoCh16G003360Wax gourdcmowgoB0444
CmoCh16G003360Cucurbita moschata (Rifu)cmocmoB010
CmoCh16G003360Cucurbita moschata (Rifu)cmocmoB096
CmoCh16G003360Cucurbita moschata (Rifu)cmocmoB286
CmoCh16G003360Cucurbita moschata (Rifu)cmocmoB296
CmoCh16G003360Cucumber (Gy14) v1cgycmoB0219
CmoCh16G003360Cucumber (Gy14) v1cgycmoB0625
CmoCh16G003360Cucumber (Gy14) v1cgycmoB0964
CmoCh16G003360Cucurbita maxima (Rimu)cmacmoB133
CmoCh16G003360Cucurbita maxima (Rimu)cmacmoB502
CmoCh16G003360Cucurbita maxima (Rimu)cmacmoB701
CmoCh16G003360Wild cucumber (PI 183967)cmocpiB336
CmoCh16G003360Wild cucumber (PI 183967)cmocpiB344
CmoCh16G003360Cucumber (Chinese Long) v2cmocuB328
CmoCh16G003360Cucumber (Chinese Long) v2cmocuB337
CmoCh16G003360Cucumber (Chinese Long) v2cmocuB338
CmoCh16G003360Melon (DHL92) v3.5.1cmomeB304
CmoCh16G003360Melon (DHL92) v3.5.1cmomeB280