Cucsa.097530 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAGATGGTGTCAAGAAAGAGAGAGAAGCAAAGAAGGAAAAAATAATGGAGTGGAAAAAAGTTGCTTTAGTTGCAATGATGGGGATGTTGCTTATGGCTACTTTTACAGAGTCAGTCGGTTTGGGCGTGGATGAGGAGATCATTCAATTAGTTTCGGACGGGCTGAATGAGTACTCACAAAATATTGGAAAGGAAACTGTAGGCTGCCCTCGAATCCTTATGCCGTGTAAATCCGACCACGACTGCTTAAGTGGCTGCACTTGCAAACGAAACGGCTATTGTGGTTGACTCCTAGCCGTGATGTTTCGTTCGGATCTTCTACGGTGTCTTTGTTTGTGTGTGTTTTCTATTTTATGAAAATAAATGCATGGTTGTTGTGTGTCTTTCTCATCACTCTTTTCTCTCGTGTGTATGAGTTAGTGTGATCATATCAGTGGCATGCCTGATATCCCATCAAGCTGTTTTGTTGTAATATTTATTATGCTCTCTATCTCACTATGGTCTTTGAGGATATCTTCCCTATCTCCTTCCATCAACTTTAAGTTTCATTTTCTTTAACCATTCTTCCATGAATTTAAAGTTTTATTTTTTTTAACCATTAAATACTCAAAGATTAACTGTTAATCACTCAAAATTCATTTTTTTTAAACTATAGTTTTGAGTGTTTATCATATACTACATCATTTTATATAACAAACACCTTCACGTGGATGTGGGCAAATCATAGTGAAGCTTGAGAGGTTTCTTTGAA TGAGATGGTGTCAAGAAAGAGAGAGAAGCAAAGAAGGAAAAAATAATGGAGTGGAAAAAAGTTGCTTTAGTTGCAATGATGGGGATGTTGCTTATGGCTACTTTTACAGAGTCAGTCGGTTTGGGCGTGGATGAGGAGATCATTCAATTAGTTTCGGACGGGCTGAATGAGTACTCACAAAATATTGGAAAGGAAACTGTAGGCTGCCCTCGAATCCTTATGCCGTGTAAATCCGACCACGACTGCTTAAGTGGCTGCACTTGCAAACGAAACGGCTATTGTGGTTGACTCCTAGCCGTGATGTTTCGTTCGGATCTTCTACGGTGTCTTTGTTTGTGTGTGTTTTCTATTTTATGAAAATAAATGCATGGTTGTTGTGTGTCTTTCTCATCACTCTTTTCTCTCGTGTGTATGAGTTAGTGTGATCATATCAGTGGCATGCCTGATATCCCATCAAGCTGTTTTGTTGTAATATTTATTATGCTCTCTATCTCACTATGGTCTTTGAGGATATCTTCCCTATCTCCTTCCATCAACTTTAAGTTTCATTTTCTTTAACCATTCTTCCATGAATTTAAAGTTTTATTTTTTTTAACCATTAAATACTCAAagattaactgttaatcactcaaaattcattttttttaaactatagttttgagtgtttatcatatactacatcattttataTAACAAACACCTTCACGTGGATGTGGGCAAATCATAGTGAAGCTTGAGAGGTTTCTTTGAA ATGGAGTGGAAAAAAGTTGCTTTAGTTGCAATGATGGGGATGTTGCTTATGGCTACTTTTACAGAGTCAGTCGGTTTGGGCGTGGATGAGGAGATCATTCAATTAGTTTCGGACGGGCTGAATGAGTACTCACAAAATATTGGAAAGGAAACTGTAGGCTGCCCTCGAATCCTTATGCCGTGTAAATCCGACCACGACTGCTTAAGTGGCTGCACTTGCAAACGAAACGGCTATTGTGGTTGA MEWKKVALVAMMGMLLMATFTESVGLGVDEEIIQLVSDGLNEYSQNIGKETVGCPRILMPCKSDHDCLSGCTCKRNGYCG*
BLAST of Cucsa.097530 vs. Swiss-Prot
Match: ITR1_TRIKI (Trypsin inhibitor 1 OS=Trichosanthes kirilowii PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 5.0e-16 Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 1
BLAST of Cucsa.097530 vs. Swiss-Prot
Match: ITR5_LUFAE (Trypsin inhibitor 5 OS=Luffa aegyptiaca PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.8e-10 Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 1
BLAST of Cucsa.097530 vs. Swiss-Prot
Match: ITR2_BRYDI (Trypsin inhibitor 2 OS=Bryonia dioica PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 8.5e-08 Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 1
BLAST of Cucsa.097530 vs. Swiss-Prot
Match: ITR2_ECBEL (Trypsin inhibitor 2 OS=Ecballium elaterium PE=1 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 1.2e-06 Identity = 20/28 (71.43%), Postives = 22/28 (78.57%), Query Frame = 1
BLAST of Cucsa.097530 vs. Swiss-Prot
Match: ITR1_MOMRE (Trypsin inhibitor 1 OS=Momordica repens PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.1e-06 Identity = 20/27 (74.07%), Postives = 21/27 (77.78%), Query Frame = 1
BLAST of Cucsa.097530 vs. TrEMBL
Match: A0A0A0KY34_CUCSA (Trypsin inhibitor 1 OS=Cucumis sativus GN=Csa_4G000810 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 4.5e-32 Identity = 69/81 (85.19%), Postives = 73/81 (90.12%), Query Frame = 1
BLAST of Cucsa.097530 vs. TrEMBL
Match: A0A0A0KT01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000805 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 6.3e-10 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1
BLAST of Cucsa.097530 vs. TrEMBL
Match: Q9S8D2_CUCME (CMETI-B=TRYPSIN inhibitor OS=Cucumis melo PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.5e-08 Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 1
BLAST of Cucsa.097530 vs. TrEMBL
Match: A0A0A7HF87_9ROSI (TIPTOP4 protein OS=Momordica subangulata GN=TIPTOP4 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-07 Identity = 34/80 (42.50%), Postives = 45/80 (56.25%), Query Frame = 1
BLAST of Cucsa.097530 vs. TrEMBL
Match: A0A0A7HF87_9ROSI (TIPTOP4 protein OS=Momordica subangulata GN=TIPTOP4 PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 8.9e-04 Identity = 23/54 (42.59%), Postives = 29/54 (53.70%), Query Frame = 1
HSP 2 Score: 50.8 bits (120), Expect = 8.9e-04 Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 1
HSP 3 Score: 50.4 bits (119), Expect = 1.2e-03 Identity = 23/54 (42.59%), Postives = 29/54 (53.70%), Query Frame = 1
HSP 4 Score: 50.4 bits (119), Expect = 1.2e-03 Identity = 23/54 (42.59%), Postives = 29/54 (53.70%), Query Frame = 1
HSP 5 Score: 50.1 bits (118), Expect = 1.5e-03 Identity = 23/54 (42.59%), Postives = 29/54 (53.70%), Query Frame = 1
HSP 6 Score: 48.9 bits (115), Expect = 3.4e-03 Identity = 22/54 (40.74%), Postives = 28/54 (51.85%), Query Frame = 1
HSP 7 Score: 62.0 bits (149), Expect = 3.8e-07 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 1
BLAST of Cucsa.097530 vs. NCBI nr
Match: gi|700197603|gb|KGN52761.1| (Trypsin inhibitor 1 [Cucumis sativus]) HSP 1 Score: 144.8 bits (364), Expect = 6.5e-32 Identity = 69/81 (85.19%), Postives = 73/81 (90.12%), Query Frame = 1
BLAST of Cucsa.097530 vs. NCBI nr
Match: gi|8134511|sp|Q43667.1|ITR1_TRIKI (RecName: Full=Trypsin inhibitor 1; AltName: Full=TTII; AltName: Full=Trypsin inhibitor I; Flags: Precursor) HSP 1 Score: 84.7 bits (208), Expect = 8.0e-14 Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 1
BLAST of Cucsa.097530 vs. NCBI nr
Match: gi|778697386|ref|XP_011654311.1| (PREDICTED: uncharacterized protein LOC105435333 [Cucumis sativus]) HSP 1 Score: 71.2 bits (173), Expect = 9.1e-10 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1
BLAST of Cucsa.097530 vs. NCBI nr
Match: gi|778697386|ref|XP_011654311.1| (PREDICTED: uncharacterized protein LOC105435333 [Cucumis sativus]) HSP 1 Score: 68.9 bits (167), Expect = 4.5e-09 Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 1
HSP 2 Score: 71.2 bits (173), Expect = 9.1e-10 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1
BLAST of Cucsa.097530 vs. NCBI nr
Match: gi|462426|sp|P34950.1|ITR5_LUFAE (RecName: Full=Trypsin inhibitor 5; AltName: Full=TGT-II; AltName: Full=Trypsin inhibitor II; Flags: Precursor) HSP 1 Score: 66.2 bits (160), Expect = 2.9e-08 Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |