CmoCh12G011070 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G011070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Thylakoid lumen 18.3 kDa protein
Location	Cmo_Chr12 : 10097972 .. 10101570 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGTTCGTCCCTACCACTCAATTTCTTATGGAACTCACAGATTTTCGTCTCCATTTTTCGTCTGAATCTCTTCAATTCCTATGGAAACCATTCTCTTTCCTCACTCTCTCTCTCCTCTCTTCAACCCTAACCCTAACCCTTCCACTTCCAAGAATCTCTTCCCCGTTTCCTCCCAATCCAGATCAAAATTTCAATGTTTCTGTAAACCTATTTCTGTTTCGCCCAAATCTCTCAAATCTTCTCTCCCAGTTCCTTCGATTTGGCTCTCCCATCTCCAACATGGCCTCGCGGCGCTGTCGATTTCTTTGGCGCTCAACTTCTCCCCGTTGTTGGCCGGTGGGATTGCCGTAGCGTCTGAGTTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCTGGAGTTCTCAGTAGGGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTTGAGGAAGAATTTTCATATCGATTTCGTCACTGTTAGAAAGCTCACTGTGAGTTCTCTGCCTTTGAATTCTTGAGAGCGAAACTAAATTTGTGTTGTTCGGAGAATCTATGGGTTGAATGTTTAATGCAGATATATAGTTATAGAATAATTTGAACTTTTGTTTATCATGGGAAGAAAATGGTAATGATCTGGTGTATGTTTATGAGAATTTGATAATCTTTCTGAGACCCATTTTTAGAAAGTGGGCATCATATTGTGATGGGTTGTTTAAAATGATGGCCACAATATTGAGAAATACCTTCTCTGGTCTAAAGTCTTGGCTACTCACATATTGTCCTTTTGGATTTTTTCTTTCGGATTTTTCTAAGGAGAGGTTCCCATATCTTTATAAAGAATGAATTGTATACTCCTCAACTAATGTGAGGTCTCACAATCCACCCCCTTTGGAGCCCAGCGTCATCGTTCCCCTCTCCAATTGATGTGGGACCCCCTAATCGACCCCCCTTCGGGACCCAGCGTCCTCGTTCCCCTCTCCAATTGATGTGGGACTCCCTAATCGACCCCCCTTCGGGGCCCAGCGTCCTCGTTCCCCTCTCCAATTGATGTAAGATCCCCTAATCGACCCCCCTTCGGGGCCCAACGTCCTCGTTCCCCTCTCCAATTGATGTGGGACCCCCTAATCGACCCCCCTTCGGGGCCCAACGTCAGTGCTGGCACATCGCCTAGTGTCCACCCTCCTTTGGGGTTCAATCTCCTTGTTGGCACATCGTCCTCTGATACCATTTGTAACAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCATTGCTAGCAGATATTGTCCTCTTTGGACAGCCTCTTTTCGAGCGCTTCCCTTAAGGTTTTTAAAACGGATCTCCTAAGGGGAGGTTTCTACACCTTCATAAAGAATACTTTGTTCTTCTCCCTAACTGATGTGAGATCTCACAATCCACCCCCTTCGGAGTCCACTATCCTTGCTAGCACTCGTTCACCTCTCCAATCAACGTGGGATCCCCAATCCACCCCCCTTTGGGGCCCAGCGTCCTCGTAGGCACACCACCTGATGTCCACCCCCCTTTCAGGGTTCAGCCTCCTCGCTGGCACATTGCCTGGTGTCTAGCTCTGATACCATTTGTAACAGTCCAAGTCCACCGCTAGCAGATATTGTCCTTTTTTGGTTTTCCCATTCGGGCTTCCCTTCAAGGTTTTTAAAACTAGTCTTCTAGGTAAAGGTTTCCACACCCTTATAAAAAATGATTTGTTCTACTCCCCAACCAATGTGGGATCTCACAATGGTCTTCCTCAAAGAGTAGTAAGGTGGGCCATGAGCACAAGAAACATAGGTTAAATTATAAGTTTACGCTTTGATCACTTAAGTTTGTGTCTAAAGGGTCCCGAAACGTTATGAACTGCTGATTGTAGAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGATGGTATCCCACTGTGGAAGACGGCAACAATAAGGGCATAGTTGTGCTTGTCACCAGTCAAAAGGAAGGAGCCATTACTGGTGGCCCTGCGTTTATCCAAGCTGTTGGAGAAAACATTCTTGATGCCACAGTAACCGAGAATCTCCCAGGTAAACTAAGCTAACTACCACTTATTTCACTCTTCACTTTCCAAGCTACAATTTCTACCATTTCTTGCTTAAATTGAACACATTACAACTAGTAGATGCCTTAACTATACTCGTAGTCGTGTCTCCGTGTTTATGCGAGTTGACCTTGCATATGAGTTTCTCGACTTCAAAGGAAAAGAAAACCACAAACAAACTTGTATGTATCTTAGCACGTGTCAATATCCCAACTAGCGTTGTTGTTTCTACTAGGTCTGTGAGCTCTAAAAACGTCGAATATGTTGAGGACTCGTTAAACACAAATGAAAAGTTTCTGGATTTATTAGACATTGTTTGAAGCCTAGAAACCAAATAGACACGAATCTCATAGTTCAGGGACTTGTTAGGCACAAACTTGAGGAACTTCATCTTAATATTGTTCTCGGTTGCTTTTGCTCTAAGCTCTGATACTAAATGTAACCGTCCAAACCCACCGCTAGCAGATATTGCCCTTTTTGGGCTTTCTTTTCCGGGCTTCCCCGCAAGGTTTTAAAACATGTTTGCTAGGAAGAGGTTTCCACACCTTTCCCCTCTCCAATCGATGTGGGATCTCACAATCCACCCCGTTGGTGGTTCAACGTCCTTGCTAGCATATTGCCCGGTGTCTAGCTTTGATACCATTTGTAACAGTCCAAGTTCACCGCTAGCAGTTATTGTCTTCTTTGGGCTTTCACTTCCGGGTCTCTCCTTGAGGTTTTAAAACGTGTTTGCTGGGTCTTGAAGGGGGAGTACGAAACATTCTTTATAGGGGTGTAGAAACCTTTCTCTAGCAGACGCGTTTTAAAACTGTGAGACTGACGGTGATACATAACGGGCCAAAGCGGACAATATCTATTAGTGTGGGCTTGAGACGTTACACTAAAACACTAAAACACCAGGATGAATGCATCAAAGAAGTGAATAATATGCTTGTAGTTGCTACTTCATTTATGAAACTGCAGGGTGAGTAAGGTTTGTTATGTAACTGCAGTATTAGCTACCGATGAAAAATACAATGAAGCCATATATAGCAGTGCGAAACGGCTAGTTGCTGCCATTGATGGCTTGCCAGATCCTGGAGGTCCTTCATTCAAGGAAAATAAGCGAGAATCTAACTTCAAATCAAGGGAAGAAACAGAGGAGAAAAGAGGTCAGTTTTCTCTTGTTGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTGAAAGAAACATGTAAGACCCAGATCTTCCCATCTATTTCCTTCACATTCAAGTGTATAAATTTGATGCTGTATGATCGCTACAAGATGATTTGCAAGAAACCTGTTATGAAACATAGTTGAGTTTTTTTGTTCTTCTTGTTCTTCATCTTCTAGGCCTACCCTTTCCTTTTTGTTCATTTTGTTTTTAACAATTAGGATATTGGAGGTTCGAGATATTCACGGGCAAAGACAGAGAA

mRNA sequence

AGTGTTCGTCCCTACCACTCAATTTCTTATGGAACTCACAGATTTTCGTCTCCATTTTTCGTCTGAATCTCTTCAATTCCTATGGAAACCATTCTCTTTCCTCACTCTCTCTCTCCTCTCTTCAACCCTAACCCTAACCCTTCCACTTCCAAGAATCTCTTCCCCGTTTCCTCCCAATCCAGATCAAAATTTCAATGTTTCTGTAAACCTATTTCTGTTTCGCCCAAATCTCTCAAATCTTCTCTCCCAGTTCCTTCGATTTGGCTCTCCCATCTCCAACATGGCCTCGCGGCGCTGTCGATTTCTTTGGCGCTCAACTTCTCCCCGTTGTTGGCCGGTGGGATTGCCGTAGCGTCTGAGTTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCTGGAGTTCTCAGTAGGGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTTGAGGAAGAATTTTCATATCGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGATGGTATCCCACTGTGGAAGACGGCAACAATAAGGGCATAGTTGTGCTTGTCACCAGTCAAAAGGAAGGAGCCATTACTGGTGGCCCTGCGTTTATCCAAGCTGTTGGAGAAAACATTCTTGATGCCACAGTAACCGAGAATCTCCCAGTATTAGCTACCGATGAAAAATACAATGAAGCCATATATAGCAGTGCGAAACGGCTAGTTGCTGCCATTGATGGCTTGCCAGATCCTGGAGGTCCTTCATTCAAGGAAAATAAGCGAGAATCTAACTTCAAATCAAGGGAAGAAACAGAGGAGAAAAGAGGTCAGTTTTCTCTTGTTGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTGAAAGAAACATGTAAGACCCAGATCTTCCCATCTATTTCCTTCACATTCAAGTGTATAAATTTGATGCTGTATGATCGCTACAAGATGATTTGCAAGAAACCTGTTATGAAACATAGTTGAGTTTTTTTGTTCTTCTTGTTCTTCATCTTCTAGGCCTACCCTTTCCTTTTTGTTCATTTTGTTTTTAACAATTAGGATATTGGAGGTTCGAGATATTCACGGGCAAAGACAGAGAA

Coding sequence (CDS)

ATGGAAACCATTCTCTTTCCTCACTCTCTCTCTCCTCTCTTCAACCCTAACCCTAACCCTTCCACTTCCAAGAATCTCTTCCCCGTTTCCTCCCAATCCAGATCAAAATTTCAATGTTTCTGTAAACCTATTTCTGTTTCGCCCAAATCTCTCAAATCTTCTCTCCCAGTTCCTTCGATTTGGCTCTCCCATCTCCAACATGGCCTCGCGGCGCTGTCGATTTCTTTGGCGCTCAACTTCTCCCCGTTGTTGGCCGGTGGGATTGCCGTAGCGTCTGAGTTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCTGGAGTTCTCAGTAGGGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTTGAGGAAGAATTTTCATATCGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGATGGTATCCCACTGTGGAAGACGGCAACAATAAGGGCATAGTTGTGCTTGTCACCAGTCAAAAGGAAGGAGCCATTACTGGTGGCCCTGCGTTTATCCAAGCTGTTGGAGAAAACATTCTTGATGCCACAGTAACCGAGAATCTCCCAGTATTAGCTACCGATGAAAAATACAATGAAGCCATATATAGCAGTGCGAAACGGCTAGTTGCTGCCATTGATGGCTTGCCAGATCCTGGAGGTCCTTCATTCAAGGAAAATAAGCGAGAATCTAACTTCAAATCAAGGGAAGAAACAGAGGAGAAAAGAGGTCAGTTTTCTCTTGTTGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTGA

Homology

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BLAST of CmoCh12G011070 vs. Swiss-Prot
Match: U603_ARATH (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE=1 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 2.9e-106
Identity = 206/292 (70.55%), Postives = 242/292 (82.88%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           MET+L P +LSP  NP P  S  +      S S SK   F  P  +S +  K   P    
Sbjct: 1   METLLSPRALSPPLNPKPL-SLHQTKPTSHSLSLSKPTTFSGPKHLSTRFTK---PESRN 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           WL   + GLAAL++SL L FSP+   G A+ASEF++LNDGPPKE+++VDDAGVLSRVTKS
Sbjct: 61  WLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGIVVL+TS
Sbjct: 121 DLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLITS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAIDG PDPG
Sbjct: 181 QKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDGQPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           GP+ K++KRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 GPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

[Close]

BLAST of CmoCh12G011070 vs. Swiss-Prot
Match: U603_ORYSI (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_19898 PE=3 SV=2)

HSP 1 Score: 375.6 bits (963), Expect = 5.1e-103
Identity = 206/302 (68.21%), Postives = 244/302 (80.79%), Query Frame = 1


Query: 1   METILFPHSL-SPLFNPNPNPSTSKNLFPVSSQS--RSKFQCFCKPISVSPKSLKS---- 60
           MET+L P +L SPL      P++       SS S  RS   C  +     P+++ +    
Sbjct: 1   METLLSPSTLLSPLRGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAWRGD 60

Query: 61  ---SLPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDD 120
                 V S W + LQHGLAA ++SLA++ +P  A   AVASEFDVLN GPP+++++VDD
Sbjct: 61  GGRGGGVGS-WATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPEDTYVVDD 120

Query: 121 AGVLSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGN 180
           AGVLSRVTKSD+KRL+ DLE RKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+GN
Sbjct: 121 AGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGN 180

Query: 181 NKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLV 240
           NKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++AKRL 
Sbjct: 181 NKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKRLA 240

Query: 241 AAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVS 293
           AAIDGLPDPGGP+FK+NKRESNFK++EETEEKRGQF+LVVGGLLVIAFVVPMAQYYAY+S
Sbjct: 241 AAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYIS 299

[Close]

BLAST of CmoCh12G011070 vs. Swiss-Prot
Match: U603_ORYSJ (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0401100 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.1e-103
Identity = 206/302 (68.21%), Postives = 244/302 (80.79%), Query Frame = 1


Query: 1   METILFPHSL-SPLFNPNPNPSTSKNLFPVSSQS--RSKFQCFCKPISVSPKSLKS---- 60
           MET+L P +L SPL      P++       SS S  RS   C  +     P+++ +    
Sbjct: 1   METLLSPSTLLSPLRGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAWRGD 60

Query: 61  ---SLPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDD 120
                 V S W + LQHGLAA ++SLA++ +P  A   AVASEFDVLN GPP+++++VDD
Sbjct: 61  GGRGGGVGS-WATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPEDTYVVDD 120

Query: 121 AGVLSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGN 180
           AGVLSRVTKSD+KRL+ DLE RKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+GN
Sbjct: 121 AGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGN 180

Query: 181 NKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLV 240
           NKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++AKRL 
Sbjct: 181 NKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKRLA 240

Query: 241 AAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVS 293
           AAIDGLPDPGGP+FK+NKRESNFK++EETEEKRGQF+LVVGGLLVIAFVVPMAQYYAY+S
Sbjct: 241 AAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYIS 299

[Close]

BLAST of CmoCh12G011070 vs. TrEMBL
Match: A0A0A0LGA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020910 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 2.8e-132
Identity = 251/298 (84.23%), Postives = 271/298 (90.94%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVS------PKSLKSS 60
           METIL P+SLSP+ NP P+ S + +L+  S+Q RS      KPIS+S      PKSL+SS
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYH-STQPRSNLASLSKPISLSLKTPSPPKSLRSS 60

Query: 61  LPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVL 120
           LP PS W SHLQHGLAA++ISLALNFSPLLAG  A+ASEFDVL+DGPPKE+HLVDDAGVL
Sbjct: 61  LPFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI
Sbjct: 121 SRVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240
           VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID
Sbjct: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240

Query: 241 GLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           GLPD GGPSFK+NKRESNFK+REETEEKRGQF+LVVGGLLVIAF+VPMAQYYAY+SKK
Sbjct: 241 GLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQYYAYISKK 297

[Close]

BLAST of CmoCh12G011070 vs. TrEMBL
Match: A0A0D2SSZ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G294200 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.3e-118
Identity = 230/297 (77.44%), Postives = 252/297 (84.85%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           METIL  HSL P+ NP    S SKNL   S Q R       KPI+ +P    S L  PS+
Sbjct: 1   METILSSHSLHPILNPKA--SISKNLLLPSQQPRPASLFLSKPITCTPNKPTSQLVKPSL 60

Query: 61  -----WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
                W  H Q GLAAL+ISLALNFSP+L  G A+ASEFDV+N+GPPKES++VDDA VLS
Sbjct: 61  AEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDLKRLL+DLE RKNFHI+F+TVRKLTSKADAFEYADQVLERWYPT+E+G+NKGIV
Sbjct: 121 RVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           LPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of CmoCh12G011070 vs. TrEMBL
Match: A0A0B0PCT8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_05899 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 1.8e-118
Identity = 231/297 (77.78%), Postives = 253/297 (85.19%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPK-----SLKSSL 60
           METIL  HSL P+ NP    S SKNL   S Q R       KPI+ + K     S+K SL
Sbjct: 1   METILSSHSLHPILNPKA--SISKNLLLPSQQPRPASLFLSKPITCTLKKPTSQSVKPSL 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
             P  W  H Q GLAAL+ISLALNFSP+L  G A+ASEFDV+N+GPPKES++VDDA VLS
Sbjct: 61  AEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDLKRLL+DLE RKNFHI+F+TVRKLTSKADAFEYADQVLERWYPT+E+G+NKGIV
Sbjct: 121 RVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           LPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of CmoCh12G011070 vs. TrEMBL
Match: M5WJ69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009374mg PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 8.7e-118
Identity = 226/297 (76.09%), Postives = 256/297 (86.20%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPK-----SLKSSL 60
           METIL   SLSPLFNP P  S+ K     S Q  SK     KPI+ S K     SLK+SL
Sbjct: 1   METILSSPSLSPLFNPKP--SSPKTFLSPSLQPNSKSLLLTKPITSSLKKQSVPSLKTSL 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
           P+P  W S+ Q GLAAL++SLALNF PLL  G A+ASEFDVLN+GPPK+S++VDDAGVLS
Sbjct: 61  PIPKDWFSYAQQGLAALALSLALNFCPLLPSGNALASEFDVLNEGPPKDSYVVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSD+KRL+++LE +KNFHI+F+TVRKLTSKADAFEYADQVLERWYP+VE+GNNKGIV
Sbjct: 121 RVTKSDIKRLMSELEYKKNFHINFITVRKLTSKADAFEYADQVLERWYPSVEEGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGAITGGPAF+QAVGE ILDATV+ENLPVLAT+EKYNEAI+SSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAITGGPAFVQAVGETILDATVSENLPVLATEEKYNEAIFSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           LPDPGGP   +NKRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 241 LPDPGGPKLNDNKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 295

[Close]

BLAST of CmoCh12G011070 vs. TrEMBL
Match: A0A061F263_THECC (Thylakoid lumen 18.3 kDa protein OS=Theobroma cacao GN=TCM_026607 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.9e-117
Identity = 231/297 (77.78%), Postives = 252/297 (84.85%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPK-----SLKSSL 60
           METIL  HSLSP+ NP    STSK+L   S Q RS      KP + + K     SLK SL
Sbjct: 1   METILSSHSLSPILNPKA--STSKSLLSPSIQPRSASLPLSKPFTCALKKQTSQSLKPSL 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
             P  W  H Q GLAAL+ISLALNFSP+L  G A ASEFDV+N+GPPK+S++ DDA VLS
Sbjct: 61  AEPKTWFVHAQRGLAALAISLALNFSPVLHTGNAWASEFDVINEGPPKDSYVFDDANVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDL++LL+DLE RK FHI+FVTVRKLTSKADAFEYADQVLERWYPT+E+GNNKGIV
Sbjct: 121 RVTKSDLRQLLSDLESRKTFHINFVTVRKLTSKADAFEYADQVLERWYPTLEEGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGA+TGGPAFI+AVGE ILDATV+ENLPVLATDEKYNEAIYSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAVTGGPAFIEAVGEKILDATVSENLPVLATDEKYNEAIYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           LPDPGGP FKENK+ESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPKFKENKKESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of CmoCh12G011070 vs. TAIR10
Match: AT1G54780.1 (AT1G54780.1 thylakoid lumen 18.3 kDa protein)

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-107
Identity = 206/292 (70.55%), Postives = 242/292 (82.88%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           MET+L P +LSP  NP P  S  +      S S SK   F  P  +S +  K   P    
Sbjct: 1   METLLSPRALSPPLNPKPL-SLHQTKPTSHSLSLSKPTTFSGPKHLSTRFTK---PESRN 60

Query: 61  WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKS 120
           WL   + GLAAL++SL L FSP+   G A+ASEF++LNDGPPKE+++VDDAGVLSRVTKS
Sbjct: 61  WLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLSRVTKS 120

Query: 121 DLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTS 180
           DLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGIVVL+TS
Sbjct: 121 DLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLITS 180

Query: 181 QKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPG 240
           QKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAIDG PDPG
Sbjct: 181 QKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDGQPDPG 240

Query: 241 GPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           GP+ K++KRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 GPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

[Close]

BLAST of CmoCh12G011070 vs. NCBI nr
Match: gi|659070442|ref|XP_008455096.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo])

HSP 1 Score: 492.7 bits (1267), Expect = 4.6e-136
Identity = 261/298 (87.58%), Postives = 272/298 (91.28%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVS------PKSLKSS 60
           METIL PHSLSPL NP P  S+SKNL   S+Q RS      KPIS+S      PKSL+SS
Sbjct: 1   METILSPHSLSPLLNPKP--SSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSS 60

Query: 61  LPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVL 120
           LPVPS W SHLQHGLAA++ISLALNFSPLLAG  A+ASEFDVLNDGPPKE+H+VDDAGVL
Sbjct: 61  LPVPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI
Sbjct: 121 SRVTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240
           VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID
Sbjct: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240

Query: 241 GLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           GLPDPGGPSFK+NKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GLPDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]

BLAST of CmoCh12G011070 vs. NCBI nr
Match: gi|449442857|ref|XP_004139197.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 4.0e-132
Identity = 251/298 (84.23%), Postives = 271/298 (90.94%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVS------PKSLKSS 60
           METIL P+SLSP+ NP P+ S + +L+  S+Q RS      KPIS+S      PKSL+SS
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYH-STQPRSNLASLSKPISLSLKTPSPPKSLRSS 60

Query: 61  LPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVL 120
           LP PS W SHLQHGLAA++ISLALNFSPLLAG  A+ASEFDVL+DGPPKE+HLVDDAGVL
Sbjct: 61  LPFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI
Sbjct: 121 SRVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240
           VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID
Sbjct: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240

Query: 241 GLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           GLPD GGPSFK+NKRESNFK+REETEEKRGQF+LVVGGLLVIAF+VPMAQYYAY+SKK
Sbjct: 241 GLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQYYAYISKK 297

[Close]

BLAST of CmoCh12G011070 vs. NCBI nr
Match: gi|1009117133|ref|XP_015875151.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 437.2 bits (1123), Expect = 2.3e-119
Identity = 231/297 (77.78%), Postives = 259/297 (87.21%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPK-----SLKSSL 60
           METIL  HSLSPL NP    ST+K L   S +S S F    KPI+ S K     SLK S 
Sbjct: 1   METILSSHSLSPLLNPK-TCSTTKTLLSPSLRSNSLF--LAKPITSSLKKQTSQSLKPSS 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
           P+P+ W S+ Q GLAAL++SLALNFSP+LA G A+ASEFD+LN+GPPK+S+LVDDAGVLS
Sbjct: 61  PIPTSWFSYAQQGLAALALSLALNFSPVLASGSALASEFDILNEGPPKDSYLVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVT++DL+ LL+DLE RKN HI+F+TVRKLTSKADAFEYADQVLERWYP++E+GNNKGIV
Sbjct: 121 RVTRTDLRNLLSDLESRKNLHINFITVRKLTSKADAFEYADQVLERWYPSIEEGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGAITGGPAF+QAVGEN+LDATV+ENLPVLATDEKYNEAI SSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAITGGPAFVQAVGENVLDATVSENLPVLATDEKYNEAIISSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           LPDPGGP+FKENKRESNFK +EETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPTFKENKRESNFKRKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 294

[Close]

BLAST of CmoCh12G011070 vs. NCBI nr
Match: gi|951025484|ref|XP_014513692.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Vigna radiata var. radiata])

HSP 1 Score: 434.1 bits (1115), Expect = 1.9e-118
Identity = 229/294 (77.89%), Postives = 257/294 (87.41%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           M  I  PHSLSPL N  P+PS  + L   S Q +S      KPI  S +  ++S P PS 
Sbjct: 1   MGAIFPPHSLSPLLNIKPSPS--RILLAPSPQPKSNSLFCSKPIVSSLRKNQTSSPKPSC 60

Query: 61  --WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVT 120
             WLSH Q GLAAL+ISLALNFSP+L  G A+ASEFDVLN+GPP+ES++VDDAGVLSRVT
Sbjct: 61  TTWLSHAQQGLAALAISLALNFSPVLFSGNALASEFDVLNEGPPQESYVVDDAGVLSRVT 120

Query: 121 KSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLV 180
           +SDLKRLL+DLE RKNFHI+F+TVRKLTSKADAFEYADQVLERWYP+VE+GNNKGIVVL+
Sbjct: 121 RSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPSVEEGNNKGIVVLI 180

Query: 181 TSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPD 240
           TSQKEGA+TGGPAF+QAVGENILDATV+ENLPVLATDEKYNEAIYS+AKRLVAAIDGLPD
Sbjct: 181 TSQKEGAVTGGPAFVQAVGENILDATVSENLPVLATDEKYNEAIYSTAKRLVAAIDGLPD 240

Query: 241 PGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           PGGPSFK+NKRESNFK++EETEEKRGQF+LVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 PGGPSFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSKK 292

[Close]

BLAST of CmoCh12G011070 vs. NCBI nr
Match: gi|823196841|ref|XP_012493059.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Gossypium raimondii])

HSP 1 Score: 434.1 bits (1115), Expect = 1.9e-118
Identity = 230/297 (77.44%), Postives = 252/297 (84.85%), Query Frame = 1


Query: 1   METILFPHSLSPLFNPNPNPSTSKNLFPVSSQSRSKFQCFCKPISVSPKSLKSSLPVPSI 60
           METIL  HSL P+ NP    S SKNL   S Q R       KPI+ +P    S L  PS+
Sbjct: 1   METILSSHSLHPILNPKA--SISKNLLLPSQQPRPASLFLSKPITCTPNKPTSQLVKPSL 60

Query: 61  -----WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
                W  H Q GLAAL+ISLALNFSP+L  G A+ASEFDV+N+GPPKES++VDDA VLS
Sbjct: 61  AEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDLKRLL+DLE RKNFHI+F+TVRKLTSKADAFEYADQVLERWYPT+E+G+NKGIV
Sbjct: 121 RVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 293
           LPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

The following BLAST results are available for this feature:

BLAST of CmoCh12G011070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
U603_ARATH	2.9e-106	70.55	UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE...	[more]
U603_ORYSI	5.1e-103	68.21	UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_1...	[more]
U603_ORYSJ	5.1e-103	68.21	UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=O...	[more]

BLAST of CmoCh12G011070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGA5_CUCSA	2.8e-132	84.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020910 PE=4 SV=1	[more]
A0A0D2SSZ2_GOSRA	1.3e-118	77.44	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G294200 PE=4 SV=1	[more]
A0A0B0PCT8_GOSAR	1.8e-118	77.78	Uncharacterized protein OS=Gossypium arboreum GN=F383_05899 PE=4 SV=1	[more]
M5WJ69_PRUPE	8.7e-118	76.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009374mg PE=4 SV=1	[more]
A0A061F263_THECC	1.9e-117	77.78	Thylakoid lumen 18.3 kDa protein OS=Theobroma cacao GN=TCM_026607 PE=4 SV=1	[more]

BLAST of CmoCh12G011070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54780.1	1.6e-107	70.55	thylakoid lumen 18.3 kDa protein	[more]

BLAST of CmoCh12G011070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070442\|ref\|XP_008455096.1\|	4.6e-136	87.58	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo]	[more]
gi\|449442857\|ref\|XP_004139197.1\|	4.0e-132	84.23	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis sativus]	[more]
gi\|1009117133\|ref\|XP_015875151.1\|	2.3e-119	77.78	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Ziziphus jujuba]	[more]
gi\|951025484\|ref\|XP_014513692.1\|	1.9e-118	77.89	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Vigna radiata var. radiata]	[more]
gi\|823196841\|ref\|XP_012493059.1\|	1.9e-118	77.44	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007621	TPM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0008150	biological_process
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010114	response to red light
biological_process	GO:0010218	response to far red light
biological_process	GO:0009637	response to blue light
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011070.1	CmoCh12G011070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007621	TPM domain	PFAM	PF04536	TPM_phosphatase	coord: 108..230 score: 8.9
None	No IPR available	PANTHER	PTHR30373	UNCHARACTERIZED	coord: 52..292 score: 9.3
None	No IPR available	PANTHER	PTHR30373:SF2	UPF0603 PROTEIN YGCG	coord: 52..292 score: 9.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G011070	Cucsa.091810	Cucumber (Gy14) v1	cgycmoB0174
CmoCh12G011070	CmaCh12G010900	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G011070	CmaCh05G011610	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G011070	Cla019859	Watermelon (97103) v1	cmowmB156
CmoCh12G011070	Csa2G020910	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G011070	MELO3C004307	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G011070	ClCG02G016070	Watermelon (Charleston Gray)	cmowcgB144
CmoCh12G011070	CSPI02G03580	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G011070	Lsi11G005080	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G011070	Cp4.1LG11g09490	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G011070	Cp4.1LG07g09290	Cucurbita pepo (Zucchini)	cmocpeB175
CmoCh12G011070	MELO3C004307.2	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G011070	CsaV3_2G004910	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G011070	Cla97C02G041870	Watermelon (97103) v2	cmowmbB161
CmoCh12G011070	CsGy2G003690	Cucumber (Gy14) v2	cgybcmoB170
CmoCh12G011070	Carg12882	Silver-seed gourd	carcmoB1212
CmoCh12G011070	Carg17563	Silver-seed gourd	carcmoB0973

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh12G011070	CmoCh05G011720	Cucurbita moschata (Rifu)	cmocmoB148

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G011070	Cucumber (Gy14) v2	cgybcmoB050
CmoCh12G011070	Wax gourd	cmowgoB0229