Cp4.1LG07g09290 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g09290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Thylakoid lumen 18.3 kDa protein
Location	Cp4.1LG07 : 8241610 .. 8244978 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAACACTATTCGTCCCTACCACTCGATTTCTTATGGAACTCACAGATCTTCGTCTCCATTTTTCGTCTGAATCTCTTCAATTCCTATGGAAACCATTCTCTCTCCTCACTCTCTCTCTCCTCTCTTCAACCCTAACCCTAAACCTTCCACTTCCAAGAATCTCTTCCCCATTTCCTCCCAATCCAGATCAAAATTTCAATGTTTCTGTAAACCTATTTCCCTTTCTCCCAAATCTCTCAAATCTTCTCTCCCAGTTCCTTCAATTTGGCTCTCCCATCTCCAACATGGCCTCGCGGCGCTGTCGATTTCTTTGGCGCTCAACTTCTCCCCGTTGTTGGCCGGTGGGATTGCCGTAGCGTCTGAGTTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCTGGAGTTCTCAGTAGGGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTTGAGGAAGAATTTTCACATCGATTTCGTCACTGTTAGAAAGCTCACTGTGAGTTCTCTGCCTTTGAATTCTTGAGAGCGAAACTAAATTTGTGTTGTTCGGAGAATCTATGGGTTGAATGTTTAATGTAGATATATAGTTATAGAATATTTTGAACTTTTGTTTATCATGGGAAGAAAATGGTAATGATCTGGTGTATGTTTATGACAATTTGATGATCTTTCTGAGACCCATTTTTAGAAAGTGGCCATCATATTGTGATGGGTTGTTTAAAATGGTGGCCACCATATTGAGAAATACCTTCTCTTGTCTAAAGTTTTGGTTCAAGTCTCAAGTGAAAAGTTAATATTGTCTCTAGAGGATGGTTTTAATAGTCCAAGCCCATAGTTCCTACACCTTTAAGAATGCTTTGTATACTCATTCTTAACCAATGTTAGATCTCACAATCCACCTTCTTTGGAGCTCAGCGATCTCGTTCCCCTCTCCAATCGATGTGGGACCCCCTAATCGACCCCCCTTCGGGGCCCAACGTCATTGCTGGCACATCGCTTGGTGTCCACCCTCCTTTGGGTTCAGTCTACTTGTTGGCACATCGTCCAGTGTCTAGCTTTGATACCATTTGTAACAGCCCAAGCCCAAGCCCAAGCCCATTGCTAGCAAATATTGTCCTCTTTGGATAGCCCCTTTTCGAGCGCTTCCCCTTAAGGTTTTTAAAACGGATCTCCTAGGAGAGGTTTCTACACTCTCATAAAGAATACTTTGTTCTTCTCCCTAACTAATGTGAGATCTCACAATCCACCCCCTTCGGAGTCCACCATCCTTGCTGGCACTCGTTCACCTCTCCAATCGACGTGGGATCCCCAATCCACCCCCCTTTGGGGCCCAGCGTCCTCGTTGGCACACCACTTGATGTCCACCCCCCTTTCAGGGTTCAGCCTCCTCGCTGGCACATTGCCTGGTGTCTGGCTCTGATACCATTTGTAACAACCCAAGTCCACCACTAGCAGATATTGTCCTTTTTGGGTTTTCCCATTCGGGCTTCCCTTCAAGGTTTTTAAAACTAGTCTTATAGAGAGAGGTTTCCACACCCTTATAAAGAATGATTTGTTTTACTCTCCAACCAATGTGGGATCTCACAATGGTCTTCCTCAAGGAATAGTAAGGTGGGCCATGAGCACAAGAAACATAGGTTAAATTATAAGTTTACGCTTTGATCTCTTAAGTTTGTGTCTAAAGGGTCCCGAAACGTTATGAACTGCTGATTGTAGAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGATGGTATCCCACTGTGGAAGACGGCAACAATAAAGGCATAGTTGTGCTTGTCACCAGTCAAAAGGAAGGAGCCATTACTGGTGGCCCTGCTTTTATCCAAGCTGTTGGAGAAAACATTCTTGATGCCACAGTTACAGAGAACCTCCCAGGTAAACTAAGCTAACCACCACTTCTTCCACTTATTTCACTCTTCACTCTCCAAGCTAACAATTTCTACCATTTCTTGCTTAAATTGTAACACATTGCAACTAGTAGATGCCTTAACTATACTCGTAGTCGTGTCTCCGTGTTTATGCGAGTTGACCTTGCATATGAGTTTCTCGACTTCAAAGGAAAAGAAAACCACAAACAAACTTGTATGTAGCTTAGCACGTGTCAATATCCCAACTAGTGTTGTTGTTTCTAGTAGGCCTGAGAGCTCTAAAAATGTCGAATAGGTCAAGAACTTGTTAAACGCAAAATGAAAAGTTTAAGGATTTATTAGACATTTTTTGAAGCCTAGAAACCAAATAGACACGAATCTCAGAGTTCAGGAACTTGTTAGACACAAATTTGATGAACTTCATCTTAATATTGTTCTTGGTTGCTTTTGCTCAAACTTCTGATACTAAATGTAACAGTCCAAGTCTACCGTGGGTAGATATTGTCCTATTTGGGCTTTTCCTTCCAAGCTTTTCCCAAGGTTTTAAAACGTGTCTGCTAGGAAGAGGTTTCCACACATTCGTTCCCCTCTCCAATCGATGTGATCCACCCCCTTGGGGCTCAACGTCCTCGTTGGCACACTGCTTAGTGTCTGGCTCTGATACCATTTGTAATAGCTCAAGCCTACCGCTAGCAGATATTGCCTTTTTTGGGCTTGATACCATTTGTCCAAGCTCACCGCTAGCAGATATTGTTCTCTATGGGCTTTCCCTTTCGGGTTTCCCCTCAAAGTTTTAAAATGCGTTTGCTTGGCCCTGGAGGGAGAGAACGAAATATTCTTTATAAGAGTGTACAAACCTCTCTCTAGCAGACGTGTTTTAAAACTGTGAGGTTGACGGTGATACATAATGGACCAAAACGGACAATATCTATTAGCGGTGGATTTGAGCTGTTACACTAAAACACCGTGATGAATGCATCAAAGAAGTGAATAATGCTTGTAGTTGCTACTTCATTTTTTAAACTGCAGGGTGAGTAAGGTTTGTTATGTAACTGCAGTATTAGCTACTGATGAAAAATACAATGAAGCCATATATAGCAGTGCGAAACGGCTAGTTGCTGCCATTGATGGCTTGCCAGATCCTGGAGGTCCTTCATTCAAGGAAAATAAGCGAGAATCTAACTTCAAATCAAGGGAAGAAACAGAGGAGAAAAGAGGTCAGTTTTCTCTTGTTGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTGAAACAAACATGTAAGAGCCAGATCTTCCCATCTATTTCCTTCACATTCAAATGTATAAATTTGATGCTGTATGATCGCCACAAGATGATTTGCAAGAAACCTGCTATGAAATATAGTTGAGTTTTTTTTTGGTT

mRNA sequence

GTAACACTATTCGTCCCTACCACTCGATTTCTTATGGAACTCACAGATCTTCGTCTCCATTTTTCGTCTGAATCTCTTCAATTCCTATGGAAACCATTCTCTCTCCTCACTCTCTCTCTCCTCTCTTCAACCCTAACCCTAAACCTTCCACTTCCAAGAATCTCTTCCCCATTTCCTCCCAATCCAGATCAAAATTTCAATGTTTCTGTAAACCTATTTCCCTTTCTCCCAAATCTCTCAAATCTTCTCTCCCAGTTCCTTCAATTTGGCTCTCCCATCTCCAACATGGCCTCGCGGCGCTGTCGATTTCTTTGGCGCTCAACTTCTCCCCGTTGTTGGCCGGTGGGATTGCCGTAGCGTCTGAGTTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCTGGAGTTCTCAGTAGGGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTTGAGGAAGAATTTTCACATCGATTTCGTCACTGTTAGAAAGCTCACTCGATGGTATCCCACTGTGGAAGACGGCAACAATAAAGGCATAGTTGTGCTTGTCACCAGTCAAAAGGAAGGAGCCATTACTGGTGGCCCTGCTTTTATCCAAGCTGTTGGAGAAAACATTCTTGATGCCACAGTTACAGAGAACCTCCCAGTATTAGCTACTGATGAAAAATACAATGAAGCCATATATAGCAGTGCGAAACGGCTAGTTGCTGCCATTGATGGCTTGCCAGATCCTGGAGGTCCTTCATTCAAGGAAAATAAGCGAGAATCTAACTTCAAATCAAGGGAAGAAACAGAGGAGAAAAGAGGTCAGTTTTCTCTTGTTGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTGAAACAAACATGTAAGAGCCAGATCTTCCCATCTATTTCCTTCACATTCAAATGTATAAATTTGATGCTGTATGATCGCCACAAGATGATTTGCAAGAAACCTGCTATGAAATATAGTTGAGTTTTTTTTTGGTT

Coding sequence (CDS)

ATGGAAACCATTCTCTCTCCTCACTCTCTCTCTCCTCTCTTCAACCCTAACCCTAAACCTTCCACTTCCAAGAATCTCTTCCCCATTTCCTCCCAATCCAGATCAAAATTTCAATGTTTCTGTAAACCTATTTCCCTTTCTCCCAAATCTCTCAAATCTTCTCTCCCAGTTCCTTCAATTTGGCTCTCCCATCTCCAACATGGCCTCGCGGCGCTGTCGATTTCTTTGGCGCTCAACTTCTCCCCGTTGTTGGCCGGTGGGATTGCCGTAGCGTCTGAGTTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCTGGAGTTCTCAGTAGGGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTTGAGGAAGAATTTTCACATCGATTTCGTCACTGTTAGAAAGCTCACTCGATGGTATCCCACTGTGGAAGACGGCAACAATAAAGGCATAGTTGTGCTTGTCACCAGTCAAAAGGAAGGAGCCATTACTGGTGGCCCTGCTTTTATCCAAGCTGTTGGAGAAAACATTCTTGATGCCACAGTTACAGAGAACCTCCCAGTATTAGCTACTGATGAAAAATACAATGAAGCCATATATAGCAGTGCGAAACGGCTAGTTGCTGCCATTGATGGCTTGCCAGATCCTGGAGGTCCTTCATTCAAGGAAAATAAGCGAGAATCTAACTTCAAATCAAGGGAAGAAACAGAGGAGAAAAGAGGTCAGTTTTCTCTTGTTGTTGGAGGTTTGTTAGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTGA

Protein sequence

METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPKSLKSSLPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTRWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK

Homology

[Close]

BLAST of Cp4.1LG07g09290 vs. Swiss-Prot
Match: U603_ARATH (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 6.8e-97
Identity = 196/293 (66.89%), Postives = 231/293 (78.84%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPIS-SQSRSKFQCFCKPISLSPKSLKSSLPVPS 60
           MET+LSP +LSP    NPKP +     P S S S SK   F  P  LS +  K   P   
Sbjct: 1   METLLSPRALSPPL--NPKPLSLHQTKPTSHSLSLSKPTTFSGPKHLSTRFTK---PESR 60

Query: 61  IWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTK 120
            WL   + GLAAL++SL L FSP+   G A+ASEF++LNDGPPKE+++VDDAGVLSRVTK
Sbjct: 61  NWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLSRVTK 120

Query: 121 SDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGIVVLVT 180
           SDLK+LL+DLE RK   ++F+TVRKLT              +WYP++E+GNNKGIVVL+T
Sbjct: 121 SDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLIT 180

Query: 181 SQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDP 240
           SQKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAIDG PDP
Sbjct: 181 SQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDGQPDP 240

Query: 241 GGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           GGP+ K++KRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 GGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

[Close]

BLAST of Cp4.1LG07g09290 vs. Swiss-Prot
Match: U603_ORYSI (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_19898 PE=3 SV=2)

HSP 1 Score: 343.2 bits (879), Expect = 2.7e-93
Identity = 192/309 (62.14%), Postives = 229/309 (74.11%), Query Frame = 1


Query: 1   METILSPHSL-SPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPKSLKSSLPVPS 60
           MET+LSP +L SPL     KP++       SS S ++    C        +L+   P P 
Sbjct: 1   METLLSPSTLLSPLRGSKKKPASPAASASSSSSSPARSVVSC--------ALRRQQPPPQ 60

Query: 61  I----------------WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPK 120
                            W + LQHGLAA ++SLA++ +P  A   AVASEFDVLN GPP+
Sbjct: 61  AVAAWRGDGGRGGGVGSWATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPE 120

Query: 121 ESHLVDDAGVLSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWY 180
           ++++VDDAGVLSRVTKSD+KRL+ DLE RKN  I+F+TVRKLT              +WY
Sbjct: 121 DTYVVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWY 180

Query: 181 PTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIY 240
           PTVE+GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY
Sbjct: 181 PTVEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIY 240

Query: 241 SSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMA 279
           ++AKRL AAIDGLPDPGGP+FK+NKRESNFK++EETEEKRGQF+LVVGGLLVIAFVVPMA
Sbjct: 241 TTAKRLAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMA 299

[Close]

BLAST of Cp4.1LG07g09290 vs. Swiss-Prot
Match: U603_ORYSJ (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0401100 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.7e-93
Identity = 192/309 (62.14%), Postives = 229/309 (74.11%), Query Frame = 1


Query: 1   METILSPHSL-SPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPKSLKSSLPVPS 60
           MET+LSP +L SPL     KP++       SS S ++    C        +L+   P P 
Sbjct: 1   METLLSPSTLLSPLRGSKKKPASPAASASSSSSSPARSVVSC--------ALRRQQPPPQ 60

Query: 61  I----------------WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPK 120
                            W + LQHGLAA ++SLA++ +P  A   AVASEFDVLN GPP+
Sbjct: 61  AVAAWRGDGGRGGGVGSWATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPE 120

Query: 121 ESHLVDDAGVLSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWY 180
           ++++VDDAGVLSRVTKSD+KRL+ DLE RKN  I+F+TVRKLT              +WY
Sbjct: 121 DTYVVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWY 180

Query: 181 PTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIY 240
           PTVE+GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY
Sbjct: 181 PTVEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIY 240

Query: 241 SSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMA 279
           ++AKRL AAIDGLPDPGGP+FK+NKRESNFK++EETEEKRGQF+LVVGGLLVIAFVVPMA
Sbjct: 241 TTAKRLAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMA 299

[Close]

BLAST of Cp4.1LG07g09290 vs. TrEMBL
Match: A0A0A0LGA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020910 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.2e-122
Identity = 239/298 (80.20%), Postives = 257/298 (86.24%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLS------PKSLKSS 60
           METILSP+SLSP+ NP P  S + +L+  S+Q RS      KPISLS      PKSL+SS
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYH-STQPRSNLASLSKPISLSLKTPSPPKSLRSS 60

Query: 61  LPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVL 120
           LP PS W SHLQHGLAA++ISLALNFSPLLAG  A+ASEFDVL+DGPPKE+HLVDDAGVL
Sbjct: 61  LPFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGI 180
           SRVTKSDLKRLLTDLE+RKNFHIDFVTVRKLT              RWYPTVEDGNNKGI
Sbjct: 121 SRVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240
           VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID
Sbjct: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240

Query: 241 GLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           GLPD GGPSFK+NKRESNFK+REETEEKRGQF+LVVGGLLVIAF+VPMAQYYAY+SKK
Sbjct: 241 GLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQYYAYISKK 297

[Close]

BLAST of Cp4.1LG07g09290 vs. TrEMBL
Match: A0A0D2SSZ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G294200 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 9.2e-109
Identity = 218/297 (73.40%), Postives = 240/297 (80.81%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPKSLKSSLPVPSI 60
           METILS HSL P+ NP  K S SKNL   S Q R       KPI+ +P    S L  PS+
Sbjct: 1   METILSSHSLHPILNP--KASISKNLLLPSQQPRPASLFLSKPITCTPNKPTSQLVKPSL 60

Query: 61  -----WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
                W  H Q GLAAL+ISLALNFSP+L  G A+ASEFDV+N+GPPKES++VDDA VLS
Sbjct: 61  AEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGIV 180
           RVTKSDLKRLL+DLE RKNFHI+F+TVRKLT              RWYPT+E+G+NKGIV
Sbjct: 121 RVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           LPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Cp4.1LG07g09290 vs. TrEMBL
Match: A0A0B0PCT8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_05899 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.2e-108
Identity = 219/297 (73.74%), Postives = 241/297 (81.14%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPK-----SLKSSL 60
           METILS HSL P+ NP  K S SKNL   S Q R       KPI+ + K     S+K SL
Sbjct: 1   METILSSHSLHPILNP--KASISKNLLLPSQQPRPASLFLSKPITCTLKKPTSQSVKPSL 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
             P  W  H Q GLAAL+ISLALNFSP+L  G A+ASEFDV+N+GPPKES++VDDA VLS
Sbjct: 61  AEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGIV 180
           RVTKSDLKRLL+DLE RKNFHI+F+TVRKLT              RWYPT+E+G+NKGIV
Sbjct: 121 RVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           LPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Cp4.1LG07g09290 vs. TrEMBL
Match: M5WJ69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009374mg PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.9e-108
Identity = 214/297 (72.05%), Postives = 244/297 (82.15%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPK-----SLKSSL 60
           METILS  SLSPLFNP  KPS+ K     S Q  SK     KPI+ S K     SLK+SL
Sbjct: 1   METILSSPSLSPLFNP--KPSSPKTFLSPSLQPNSKSLLLTKPITSSLKKQSVPSLKTSL 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
           P+P  W S+ Q GLAAL++SLALNF PLL  G A+ASEFDVLN+GPPK+S++VDDAGVLS
Sbjct: 61  PIPKDWFSYAQQGLAALALSLALNFCPLLPSGNALASEFDVLNEGPPKDSYVVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGIV 180
           RVTKSD+KRL+++LE +KNFHI+F+TVRKLT              RWYP+VE+GNNKGIV
Sbjct: 121 RVTKSDIKRLMSELEYKKNFHINFITVRKLTSKADAFEYADQVLERWYPSVEEGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGAITGGPAF+QAVGE ILDATV+ENLPVLAT+EKYNEAI+SSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAITGGPAFVQAVGETILDATVSENLPVLATEEKYNEAIFSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           LPDPGGP   +NKRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 241 LPDPGGPKLNDNKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 295

[Close]

BLAST of Cp4.1LG07g09290 vs. TrEMBL
Match: A0A061F263_THECC (Thylakoid lumen 18.3 kDa protein OS=Theobroma cacao GN=TCM_026607 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.3e-107
Identity = 219/297 (73.74%), Postives = 240/297 (80.81%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPK-----SLKSSL 60
           METILS HSLSP+ NP  K STSK+L   S Q RS      KP + + K     SLK SL
Sbjct: 1   METILSSHSLSPILNP--KASTSKSLLSPSIQPRSASLPLSKPFTCALKKQTSQSLKPSL 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
             P  W  H Q GLAAL+ISLALNFSP+L  G A ASEFDV+N+GPPK+S++ DDA VLS
Sbjct: 61  AEPKTWFVHAQRGLAALAISLALNFSPVLHTGNAWASEFDVINEGPPKDSYVFDDANVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGIV 180
           RVTKSDL++LL+DLE RK FHI+FVTVRKLT              RWYPT+E+GNNKGIV
Sbjct: 121 RVTKSDLRQLLSDLESRKTFHINFVTVRKLTSKADAFEYADQVLERWYPTLEEGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGA+TGGPAFI+AVGE ILDATV+ENLPVLATDEKYNEAIYSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAVTGGPAFIEAVGEKILDATVSENLPVLATDEKYNEAIYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           LPDPGGP FKENK+ESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPKFKENKKESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Cp4.1LG07g09290 vs. TAIR10
Match: AT1G54780.1 (AT1G54780.1 thylakoid lumen 18.3 kDa protein)

HSP 1 Score: 355.1 bits (910), Expect = 3.8e-98
Identity = 196/293 (66.89%), Postives = 231/293 (78.84%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPIS-SQSRSKFQCFCKPISLSPKSLKSSLPVPS 60
           MET+LSP +LSP    NPKP +     P S S S SK   F  P  LS +  K   P   
Sbjct: 1   METLLSPRALSPPL--NPKPLSLHQTKPTSHSLSLSKPTTFSGPKHLSTRFTK---PESR 60

Query: 61  IWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLSRVTK 120
            WL   + GLAAL++SL L FSP+   G A+ASEF++LNDGPPKE+++VDDAGVLSRVTK
Sbjct: 61  NWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLSRVTK 120

Query: 121 SDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGIVVLVT 180
           SDLK+LL+DLE RK   ++F+TVRKLT              +WYP++E+GNNKGIVVL+T
Sbjct: 121 SDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLIT 180

Query: 181 SQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDP 240
           SQKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAIDG PDP
Sbjct: 181 SQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDGQPDP 240

Query: 241 GGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           GGP+ K++KRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 GGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

[Close]

BLAST of Cp4.1LG07g09290 vs. NCBI nr
Match: gi|659070442|ref|XP_008455096.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo])

HSP 1 Score: 461.5 bits (1186), Expect = 1.1e-126
Identity = 250/298 (83.89%), Postives = 260/298 (87.25%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLS------PKSLKSS 60
           METILSPHSLSPL NP  KPS+SKNL   S+Q RS      KPISLS      PKSL+SS
Sbjct: 1   METILSPHSLSPLLNP--KPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSS 60

Query: 61  LPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVL 120
           LPVPS W SHLQHGLAA++ISLALNFSPLLAG  A+ASEFDVLNDGPPKE+H+VDDAGVL
Sbjct: 61  LPVPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGI 180
           SRVTKSDLKRLLTDLE RKNFHIDFVTVRKLT              RWYPTVEDGNNKGI
Sbjct: 121 SRVTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240
           VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID
Sbjct: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240

Query: 241 GLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           GLPDPGGPSFK+NKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GLPDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]

BLAST of Cp4.1LG07g09290 vs. NCBI nr
Match: gi|449442857|ref|XP_004139197.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis sativus])

HSP 1 Score: 446.0 bits (1146), Expect = 4.7e-122
Identity = 239/298 (80.20%), Postives = 257/298 (86.24%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLS------PKSLKSS 60
           METILSP+SLSP+ NP P  S + +L+  S+Q RS      KPISLS      PKSL+SS
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYH-STQPRSNLASLSKPISLSLKTPSPPKSLRSS 60

Query: 61  LPVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVL 120
           LP PS W SHLQHGLAA++ISLALNFSPLLAG  A+ASEFDVL+DGPPKE+HLVDDAGVL
Sbjct: 61  LPFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGI 180
           SRVTKSDLKRLLTDLE+RKNFHIDFVTVRKLT              RWYPTVEDGNNKGI
Sbjct: 121 SRVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240
           VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID
Sbjct: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240

Query: 241 GLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           GLPD GGPSFK+NKRESNFK+REETEEKRGQF+LVVGGLLVIAF+VPMAQYYAY+SKK
Sbjct: 241 GLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQYYAYISKK 297

[Close]

BLAST of Cp4.1LG07g09290 vs. NCBI nr
Match: gi|1009117133|ref|XP_015875151.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 402.1 bits (1032), Expect = 7.7e-109
Identity = 218/297 (73.40%), Postives = 246/297 (82.83%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPK-----SLKSSL 60
           METILS HSLSPL NP    ST+K L   S +S S F    KPI+ S K     SLK S 
Sbjct: 1   METILSSHSLSPLLNPK-TCSTTKTLLSPSLRSNSLF--LAKPITSSLKKQTSQSLKPSS 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
           P+P+ W S+ Q GLAAL++SLALNFSP+LA G A+ASEFD+LN+GPPK+S+LVDDAGVLS
Sbjct: 61  PIPTSWFSYAQQGLAALALSLALNFSPVLASGSALASEFDILNEGPPKDSYLVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGIV 180
           RVT++DL+ LL+DLE RKN HI+F+TVRKLT              RWYP++E+GNNKGIV
Sbjct: 121 RVTRTDLRNLLSDLESRKNLHINFITVRKLTSKADAFEYADQVLERWYPSIEEGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGAITGGPAF+QAVGEN+LDATV+ENLPVLATDEKYNEAI SSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAITGGPAFVQAVGENVLDATVSENLPVLATDEKYNEAIISSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           LPDPGGP+FKENKRESNFK +EETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPTFKENKRESNFKRKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 294

[Close]

BLAST of Cp4.1LG07g09290 vs. NCBI nr
Match: gi|823196841|ref|XP_012493059.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Gossypium raimondii])

HSP 1 Score: 401.4 bits (1030), Expect = 1.3e-108
Identity = 218/297 (73.40%), Postives = 240/297 (80.81%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPKSLKSSLPVPSI 60
           METILS HSL P+ NP  K S SKNL   S Q R       KPI+ +P    S L  PS+
Sbjct: 1   METILSSHSLHPILNP--KASISKNLLLPSQQPRPASLFLSKPITCTPNKPTSQLVKPSL 60

Query: 61  -----WLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
                W  H Q GLAAL+ISLALNFSP+L  G A+ASEFDV+N+GPPKES++VDDA VLS
Sbjct: 61  AEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGIV 180
           RVTKSDLKRLL+DLE RKNFHI+F+TVRKLT              RWYPT+E+G+NKGIV
Sbjct: 121 RVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           LPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Cp4.1LG07g09290 vs. NCBI nr
Match: gi|728841778|gb|KHG21221.1| (hypothetical protein F383_05899 [Gossypium arboreum])

HSP 1 Score: 401.0 bits (1029), Expect = 1.7e-108
Identity = 219/297 (73.74%), Postives = 241/297 (81.14%), Query Frame = 1


Query: 1   METILSPHSLSPLFNPNPKPSTSKNLFPISSQSRSKFQCFCKPISLSPK-----SLKSSL 60
           METILS HSL P+ NP  K S SKNL   S Q R       KPI+ + K     S+K SL
Sbjct: 1   METILSSHSLHPILNP--KASISKNLLLPSQQPRPASLFLSKPITCTLKKPTSQSVKPSL 60

Query: 61  PVPSIWLSHLQHGLAALSISLALNFSPLLAGGIAVASEFDVLNDGPPKESHLVDDAGVLS 120
             P  W  H Q GLAAL+ISLALNFSP+L  G A+ASEFDV+N+GPPKES++VDDA VLS
Sbjct: 61  AEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANVLS 120

Query: 121 RVTKSDLKRLLTDLELRKNFHIDFVTVRKLT--------------RWYPTVEDGNNKGIV 180
           RVTKSDLKRLL+DLE RKNFHI+F+TVRKLT              RWYPT+E+G+NKGIV
Sbjct: 121 RVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAIDG
Sbjct: 181 VLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 279
           LPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 LPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g09290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
U603_ARATH	6.8e-97	66.89	UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE...	[more]
U603_ORYSI	2.7e-93	62.14	UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_1...	[more]
U603_ORYSJ	2.7e-93	62.14	UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=O...	[more]

BLAST of Cp4.1LG07g09290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGA5_CUCSA	3.2e-122	80.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020910 PE=4 SV=1	[more]
A0A0D2SSZ2_GOSRA	9.2e-109	73.40	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G294200 PE=4 SV=1	[more]
A0A0B0PCT8_GOSAR	1.2e-108	73.74	Uncharacterized protein OS=Gossypium arboreum GN=F383_05899 PE=4 SV=1	[more]
M5WJ69_PRUPE	5.9e-108	72.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009374mg PE=4 SV=1	[more]
A0A061F263_THECC	1.3e-107	73.74	Thylakoid lumen 18.3 kDa protein OS=Theobroma cacao GN=TCM_026607 PE=4 SV=1	[more]

BLAST of Cp4.1LG07g09290 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54780.1	3.8e-98	66.89	thylakoid lumen 18.3 kDa protein	[more]

BLAST of Cp4.1LG07g09290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070442\|ref\|XP_008455096.1\|	1.1e-126	83.89	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo]	[more]
gi\|449442857\|ref\|XP_004139197.1\|	4.7e-122	80.20	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis sativus]	[more]
gi\|1009117133\|ref\|XP_015875151.1\|	7.7e-109	73.40	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Ziziphus jujuba]	[more]
gi\|823196841\|ref\|XP_012493059.1\|	1.3e-108	73.40	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Gossypium raimondii]	[more]
gi\|728841778\|gb\|KHG21221.1\|	1.7e-108	73.74	hypothetical protein F383_05899 [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007621	TPM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009637	response to blue light
biological_process	GO:0008150	biological_process
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0010114	response to red light
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0010218	response to far red light
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0019344	cysteine biosynthetic process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g09290.1	Cp4.1LG07g09290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007621	TPM domain	PFAM	PF04536	TPM_phosphatase	coord: 108..216 score: 1.5
None	No IPR available	PANTHER	PTHR30373	UNCHARACTERIZED	coord: 52..278 score: 8.9
None	No IPR available	PANTHER	PTHR30373:SF2	UPF0603 PROTEIN YGCG	coord: 52..278 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g09290	Cucsa.091810	Cucumber (Gy14) v1	cgycpeB0177
Cp4.1LG07g09290	CmaCh12G010900	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g09290	CmaCh05G011610	Cucurbita maxima (Rimu)	cmacpeB789
Cp4.1LG07g09290	CmoCh05G011720	Cucurbita moschata (Rifu)	cmocpeB742
Cp4.1LG07g09290	CmoCh12G011070	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g09290	Cla019859	Watermelon (97103) v1	cpewmB806
Cp4.1LG07g09290	Csa2G020910	Cucumber (Chinese Long) v2	cpecuB820
Cp4.1LG07g09290	MELO3C004307	Melon (DHL92) v3.5.1	cpemeB771
Cp4.1LG07g09290	ClCG02G016070	Watermelon (Charleston Gray)	cpewcgB733
Cp4.1LG07g09290	CSPI02G03580	Wild cucumber (PI 183967)	cpecpiB821
Cp4.1LG07g09290	Lsi11G005080	Bottle gourd (USVL1VR-Ls)	cpelsiB659
Cp4.1LG07g09290	MELO3C004307.2	Melon (DHL92) v3.6.1	cpemedB907
Cp4.1LG07g09290	CsaV3_2G004910	Cucumber (Chinese Long) v3	cpecucB1014
Cp4.1LG07g09290	CsGy2G003690	Cucumber (Gy14) v2	cgybcpeB271
Cp4.1LG07g09290	Carg17563	Silver-seed gourd	carcpeB1006
Cp4.1LG07g09290	Carg12882	Silver-seed gourd	carcpeB1256

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g09290	Cp4.1LG11g09490	Cucurbita pepo (Zucchini)	cpecpeB139

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g09290	Wax gourd	cpewgoB1027
Cp4.1LG07g09290	Wax gourd	cpewgoB1072
Cp4.1LG07g09290	Cucumber (Gy14) v2	cgybcpeB143