Lsi11G005080 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi11G005080
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionThylakoid lumen 18.3 kDa family protein
Locationchr11 : 5406248 .. 5408531 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACCATTTTCTCTCCCCACTCTCTCTCTCCTCTCCTAAACCCCAAACCTTCTTCTTCCAAGAATTTCTTGCCCTATTCCTTCCAAACCAGAACAAATCTTGTTTCTCTCTCTAAACCCATTTCCTTCTCCCTCAAAACCCCTTCTCCTCCGAAGTCTCTCCGATCATCTCTCCCAGTTCCTTCGACTTGGTTCTCCCATCTCCAACATGGGCTGGCGGCGGTAGCGATTTCTTTGGCGCTTAACTTTTCCCCATTGTTGGCCGCCCATAATGCCCTAGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAATCGCATGTGGTGGACGATGCCGGAGTTCTCAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACAGATTTGGAGTCGAGGAAGAATTTTCATATTGATTTCGTCACTGTTAGAAAGCTCACTGTAAGTTCTTTTCTTTTATCTCCCTTCAAATTCTAGTGAGAGAAATTAAACACTTGTGGTTCAGAAAAGCTGTTGGGTCATGAATGTCCATTTTACTCTGCTGTGATCCAAATGGTAGAACAATTCTTGAAGAGTATCTTTTACAGTGGAATGATTCTAATTTAGATGAATTTGTTGATGAACTTGGTGTATGTTTATGAAAATTTGAAAATATTTATAAGATACATGATCGGAAAATGGGCATCATTTTGTGATGGCTTGTTTCAAATGAAGGCACACCACAAGACTTTGTCTAGAAATACCTTCCCTAGTCTGAAGGTTTTGGTTCAAGCTCTTAAAAGAAACTTTTTTTTTTCTTTTCAAAACTTGACAAAATTTAAAAAAAAAAAAATATATATATATATATATATATATATAGGTGGAGCACGAAATTAGTGTTTATAAGCTTAATTTTTAAAACTAAGTGGTTATCAAACGAGGCTTTGATGCTCCGTAAGGTCTCTCAAGGTTAGTCTTGTGCAAGGAGTGTCTATGATATATAAAAAAAAGAAAAGTATATTTTTGGTCCCTAGATTTTGGGTCTAATTTCTATTTGGTTCCTGAGTTTCAAATTGTTACACATTTAGTTCTTAAGTTTTAAATTTGGTTTCAATTTAATTTCTAAGGTTTCAAACTGTTACAATTATATCATTGGCATTTGAATTTTGTTTCAATTTGGTCTGAGTGTTTCATGAAAAGTTGAGGTTAAAAATGTAAAATCTTGAAACATAAGGATCAAATTGAAATAAAATTCAAATCTCAATGGTAAAATTACAATATTTTGAAACTTAGAGGCTAAATTGAAACCAAACTGAAAACTTAAGGACTAAATGTGTAACATTTTGAAAGAACTAAATAGAAACTAAATCCAAAATCTAGGGACCAAAAAAGTATTTTTCCTTAAAAATATATATATATACATATATACTAAGATATGAAATGAAAAGGGAGATGTATGAAATCTGATATGAATTTATAAACTGTTGGCTGTAGAGCAAAGCTGATGCATTTGAGTATGCCGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGTGAAAATATTCTTGATGCCACTGTAACAGAGAATCTTCCAGGTTAACTAACTACCACTTCTTCAACTTATTTCATTCTTCACTGTCATCAACATTGAACAAACAAAACTCCCACCTAAATCTGCTAGTGCTATTTCATCAGCCTCTTCACCCATTAATTTCTACTACCTCTCTTGCTGAACTTAAATTGTAACACATTACAACTAGTAGATGCCTCAAGTGCACTCGTATCTTGTCAAGTCACTGTTGTTTATAAGTTTATCAATTTCAGAGGAAAAGATAACCGCAAACAATCTCGTATCTTAGCAGGTGTCAATATCCTTCCCAGCTAGTAGTTGTGAATTATGCTACTTTGTTGTTTTTCAAACTGCAACTGACTAAGATTGTTCTTATCTAACTGCAGTCTTAGCTACTGATGAAAAGTATAACGAAGCCATATATAGCAGTGCAAAGCGGTTAGTTGCTGCCATTGATGGCCTTCCAGATCCGGGTGGTCCTTCAATTAAGGATAATAAACGCGAATCCAACTTCAAAACAAGGGAAGAGACCGAGGAGAAACGAGGACAGTTTACTCTTGTAGTTGGAGGTTTGTTAGTGATAGCCTTCGTTGTTCCTATGGCTCAGTACTATGCTTATGTATCCAGGAAGTAA

mRNA sequence

ATGGAAACCATTTTCTCTCCCCACTCTCTCTCTCCTCTCCTAAACCCCAAACCTTCTTCTTCCAAGAATTTCTTGCCCTATTCCTTCCAAACCAGAACAAATCTTGTTTCTCTCTCTAAACCCATTTCCTTCTCCCTCAAAACCCCTTCTCCTCCGAAGTCTCTCCGATCATCTCTCCCAGTTCCTTCGACTTGGTTCTCCCATCTCCAACATGGGCTGGCGGCGGTAGCGATTTCTTTGGCGCTTAACTTTTCCCCATTGTTGGCCGCCCATAATGCCCTAGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAATCGCATGTGGTGGACGATGCCGGAGTTCTCAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACAGATTTGGAGTCGAGGAAGAATTTTCATATTGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCCGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGTGAAAATATTCTTGATGCCACTGTAACAGAGAATCTTCCAGTAGATGCCTCAAGTGCACTCGTATCTTGTCAAGTCACTGTTGTTTATAAGTTTATCAATTTCAGAGGAAAAGATAACCGCAAACAATCTCGTATCTTAGCAGTCTTAGCTACTGATGAAAAGTATAACGAAGCCATATATAGCAGTGCAAAGCGGTTAGTTGCTGCCATTGATGGCCTTCCAGATCCGGGTGGTCCTTCAATTAAGGATAATAAACGCGAATCCAACTTCAAAACAAGGGAAGAGACCGAGGAGAAACGAGGACAGTTTACTCTTGTAGTTGGAGGTTTGTTAGTGATAGCCTTCGTTGTTCCTATGGCTCAGTACTATGCTTATGTATCCAGGAAGTAA

Coding sequence (CDS)

ATGGAAACCATTTTCTCTCCCCACTCTCTCTCTCCTCTCCTAAACCCCAAACCTTCTTCTTCCAAGAATTTCTTGCCCTATTCCTTCCAAACCAGAACAAATCTTGTTTCTCTCTCTAAACCCATTTCCTTCTCCCTCAAAACCCCTTCTCCTCCGAAGTCTCTCCGATCATCTCTCCCAGTTCCTTCGACTTGGTTCTCCCATCTCCAACATGGGCTGGCGGCGGTAGCGATTTCTTTGGCGCTTAACTTTTCCCCATTGTTGGCCGCCCATAATGCCCTAGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAATCGCATGTGGTGGACGATGCCGGAGTTCTCAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACAGATTTGGAGTCGAGGAAGAATTTTCATATTGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCCGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGTGAAAATATTCTTGATGCCACTGTAACAGAGAATCTTCCAGTAGATGCCTCAAGTGCACTCGTATCTTGTCAAGTCACTGTTGTTTATAAGTTTATCAATTTCAGAGGAAAAGATAACCGCAAACAATCTCGTATCTTAGCAGTCTTAGCTACTGATGAAAAGTATAACGAAGCCATATATAGCAGTGCAAAGCGGTTAGTTGCTGCCATTGATGGCCTTCCAGATCCGGGTGGTCCTTCAATTAAGGATAATAAACGCGAATCCAACTTCAAAACAAGGGAAGAGACCGAGGAGAAACGAGGACAGTTTACTCTTGTAGTTGGAGGTTTGTTAGTGATAGCCTTCGTTGTTCCTATGGCTCAGTACTATGCTTATGTATCCAGGAAGTAA

Protein sequence

METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK
BLAST of Lsi11G005080 vs. Swiss-Prot
Match: U603_ARATH (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE=1 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 4.6e-84
Identity = 188/332 (56.63%), Postives = 223/332 (67.17%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSL--RSS 60
           MET+ SP +LSP LNPKP S     P S       +SLSKP +FS      PK L  R +
Sbjct: 1   METLLSPRALSPPLNPKPLSLHQTKPTSHS-----LSLSKPTTFS-----GPKHLSTRFT 60

Query: 61  LPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVL 120
            P    W    + GLAA+A+SL L FSP+     ALASEF++LNDGPPKE++VVDDAGVL
Sbjct: 61  KPESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGI
Sbjct: 121 SRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGK 240
           VVL+TSQKEGAITGGPAFI+AVGENILDATV+ENLPV A+    +     VY        
Sbjct: 181 VVLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYN---EAVYS------- 240

Query: 241 DNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETE 300
                 R++A +             +KR                      SNFKT+EET+
Sbjct: 241 ---SAKRLVAAIDGQPDPGGPTVKDSKRE---------------------SNFKTKEETD 285

Query: 301 EKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EKRGQF+LVVGGLLVIAFVVPMAQY+AYVSRK
Sbjct: 301 EKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

BLAST of Lsi11G005080 vs. Swiss-Prot
Match: U603_ORYSI (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_19898 PE=3 SV=2)

HSP 1 Score: 235.3 bits (599), Expect = 9.3e-61
Identity = 142/274 (51.82%), Postives = 183/274 (66.79%), Query Frame = 1

Query: 1   METIFSPHSL-SPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSL 60
           MET+ SP +L SPL   + S  K   P +  + ++       +S +L+   PP    ++ 
Sbjct: 1   METLLSPSTLLSPL---RGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAW 60

Query: 61  PVPS-------TWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVV 120
                      +W + LQHGLAA A+SLA++ +P  A   A+ASEFDVLN GPP++++VV
Sbjct: 61  RGDGGRGGGVGSWATFLQHGLAAAALSLAISMAPAPAP--AVASEFDVLNGGPPEDTYVV 120

Query: 121 DDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVED 180
           DDAGVLSRVTKSD+KRL+ DLESRKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+
Sbjct: 121 DDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEE 180

Query: 181 GNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKF 240
           GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPV A+    +  +    K 
Sbjct: 181 GNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKR 240

Query: 241 I-----------NFRGKDNRKQSRILAVLATDEK 256
           +               KDN+++S       T+EK
Sbjct: 241 LAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEK 269

BLAST of Lsi11G005080 vs. Swiss-Prot
Match: U603_ORYSJ (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0401100 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 9.3e-61
Identity = 142/274 (51.82%), Postives = 183/274 (66.79%), Query Frame = 1

Query: 1   METIFSPHSL-SPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSL 60
           MET+ SP +L SPL   + S  K   P +  + ++       +S +L+   PP    ++ 
Sbjct: 1   METLLSPSTLLSPL---RGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAW 60

Query: 61  PVPS-------TWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVV 120
                      +W + LQHGLAA A+SLA++ +P  A   A+ASEFDVLN GPP++++VV
Sbjct: 61  RGDGGRGGGVGSWATFLQHGLAAAALSLAISMAPAPAP--AVASEFDVLNGGPPEDTYVV 120

Query: 121 DDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVED 180
           DDAGVLSRVTKSD+KRL+ DLESRKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+
Sbjct: 121 DDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEE 180

Query: 181 GNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKF 240
           GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPV A+    +  +    K 
Sbjct: 181 GNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKR 240

Query: 241 I-----------NFRGKDNRKQSRILAVLATDEK 256
           +               KDN+++S       T+EK
Sbjct: 241 LAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEK 269

BLAST of Lsi11G005080 vs. TrEMBL
Match: A0A0J8CJ46_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g083420 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 3.6e-112
Identity = 224/330 (67.88%), Postives = 259/330 (78.48%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI SP + SPLLNPKPSS+++FL   FQ R+N +  +KPIS+SLK         SSL 
Sbjct: 1   METILSPPTFSPLLNPKPSSTRSFLSPCFQPRSNSLPSTKPISYSLKKHISLPQKSSSLS 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
           +P+ W S +QHGLAA+A+SLALNFSP+L +  A ASEFDV+NDGPPKES+VVDDAGVLSR
Sbjct: 61  IPNNWLSPIQHGLAALALSLALNFSPILPSGLANASEFDVVNDGPPKESYVVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLESRKNF I+F+TVRKLTSKADAFEYADQVLE+WYP++E G+NKGIVV
Sbjct: 121 VTKSDLKRLLTDLESRKNFRINFITVRKLTSKADAFEYADQVLEKWYPSLEQGDNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDN 240
           LVTSQKEGA+TGGP+F++AVGE                 A VS               DN
Sbjct: 181 LVTSQKEGAVTGGPSFVKAVGE-------------SILDATVS---------------DN 240

Query: 241 RKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEK 300
                 L VLAT+EKYNEA+YS+AKRLVAAIDGLPDPGGP  ++NKRESNFKT+EETEEK
Sbjct: 241 ------LPVLATEEKYNEAVYSTAKRLVAAIDGLPDPGGPKFQENKRESNFKTKEETEEK 296

Query: 301 RGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           RGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 RGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

BLAST of Lsi11G005080 vs. TrEMBL
Match: A0A061F263_THECC (Thylakoid lumen 18.3 kDa protein OS=Theobroma cacao GN=TCM_026607 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 6.8e-111
Identity = 224/330 (67.88%), Postives = 256/330 (77.58%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI S HSLSP+LNPK S+SK+ L  S Q R+  + LSKP + +LK  +  +SL+ SL 
Sbjct: 1   METILSSHSLSPILNPKASTSKSLLSPSIQPRSASLPLSKPFTCALKKQTS-QSLKPSLA 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
            P TWF H Q GLAA+AISLALNFSP+L   NA ASEFDV+N+GPPK+S+V DDA VLSR
Sbjct: 61  EPKTWFVHAQRGLAALAISLALNFSPVLHTGNAWASEFDVINEGPPKDSYVFDDANVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDL++LL+DLESRK FHI+FVTVRKLTSKADAFEYADQVLERWYPT+E+GNNKGIVV
Sbjct: 121 VTKSDLRQLLSDLESRKTFHINFVTVRKLTSKADAFEYADQVLERWYPTLEEGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDN 240
           LVTSQKEGA+TGGPAFI+AVG                             K ++    +N
Sbjct: 181 LVTSQKEGAVTGGPAFIEAVG----------------------------EKILDATVSEN 240

Query: 241 RKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEK 300
                 L VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGP  K+NK+ESNFK+REETEEK
Sbjct: 241 ------LPVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPKFKENKKESNFKSREETEEK 295

Query: 301 RGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           RGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 RGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

BLAST of Lsi11G005080 vs. TrEMBL
Match: A0A0B2Q4D9_GLYSO (UPF0603 protein, chloroplastic OS=Glycine soja GN=glysoja_012126 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 7.1e-108
Identity = 222/333 (66.67%), Postives = 255/333 (76.58%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           M TIF PHSLSPLLN KPS S+  L  S Q ++N +  SKPI  SL+        ++S P
Sbjct: 1   MGTIFPPHSLSPLLNIKPSPSRILLAPSPQPKSNSLFCSKPIVSSLRKN------QTSSP 60

Query: 61  VPST---WFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGV 120
            PS+   W +H Q GLAA+AISLALNFSP+L   NALASEFDVLN+GPPK+S+V DDAGV
Sbjct: 61  KPSSGTSWLAHAQQGLAALAISLALNFSPVLFNGNALASEFDVLNEGPPKDSYVFDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVT+SDLK+LL+DLESRKNF I+F+TVRKLTSKADAFEYADQVLERWYP+VE+GNNKG
Sbjct: 121 LSRVTRSDLKQLLSDLESRKNFRINFITVRKLTSKADAFEYADQVLERWYPSVEEGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRG 240
           IVVLVTSQKEGA+TGGPAF++AVG                             K ++   
Sbjct: 181 IVVLVTSQKEGAVTGGPAFVEAVG----------------------------EKILDATV 240

Query: 241 KDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREET 300
            +N      L VLATDEKYNEAI+S+AKRL AAIDGLPDPGGP++KDNKRESNFKT+EET
Sbjct: 241 SEN------LPVLATDEKYNEAIFSTAKRLAAAIDGLPDPGGPTVKDNKRESNFKTKEET 293

Query: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSKK 293

BLAST of Lsi11G005080 vs. TrEMBL
Match: C6TM31_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G157100 PE=2 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.7e-107
Identity = 221/333 (66.37%), Postives = 254/333 (76.28%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           M TIF PHSLSPLLN KPS S+  L    Q ++N +  SKPI  SL+        ++S P
Sbjct: 1   MGTIFPPHSLSPLLNIKPSPSRILLAPCPQPKSNSLFCSKPIVSSLRKN------QTSSP 60

Query: 61  VPST---WFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGV 120
            PS+   W +H Q GLAA+AISLALNFSP+L   NALASEFDVLN+GPPK+S+V DDAGV
Sbjct: 61  KPSSGTSWLAHAQQGLAALAISLALNFSPVLFNGNALASEFDVLNEGPPKDSYVFDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVT+SDLK+LL+DLESRKNF I+F+TVRKLTSKADAFEYADQVLERWYP+VE+GNNKG
Sbjct: 121 LSRVTRSDLKQLLSDLESRKNFRINFITVRKLTSKADAFEYADQVLERWYPSVEEGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRG 240
           IVVLVTSQKEGA+TGGPAF++AVG                             K ++   
Sbjct: 181 IVVLVTSQKEGAVTGGPAFVEAVG----------------------------EKILDATV 240

Query: 241 KDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREET 300
            +N      L VLATDEKYNEAI+S+AKRL AAIDGLPDPGGP++KDNKRESNFKT+EET
Sbjct: 241 SEN------LPVLATDEKYNEAIFSTAKRLAAAIDGLPDPGGPTVKDNKRESNFKTKEET 293

Query: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSKK 293

BLAST of Lsi11G005080 vs. TrEMBL
Match: I1NIW9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G231600 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 7.8e-107
Identity = 222/333 (66.67%), Postives = 253/333 (75.98%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLK---TPSPPKSLRS 60
           M TIF PHSLSPLLN KPS S+  L  S Q ++N +  SKPI  SL+   T SP  S  +
Sbjct: 1   MGTIFPPHSLSPLLNIKPSPSRILLAPSPQPKSNSLFCSKPIVSSLRKNQTLSPKPSSGT 60

Query: 61  SLPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGV 120
           S      W +H Q GLAA+AISLALNFSP+L   NALASEFDVLN+GPPK+S+V DDAGV
Sbjct: 61  S------WLAHAQQGLAALAISLALNFSPVLFNGNALASEFDVLNEGPPKDSYVFDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVT+SDLK+LL+DLESRKNF I+F+TVRKLTSKADAFEYADQVLERWYP+VE+GN KG
Sbjct: 121 LSRVTRSDLKQLLSDLESRKNFRINFITVRKLTSKADAFEYADQVLERWYPSVEEGNKKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRG 240
           IVVLVTSQKEGA+TGGPAF++AVG                             K ++   
Sbjct: 181 IVVLVTSQKEGAVTGGPAFVEAVG----------------------------EKILDATV 240

Query: 241 KDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREET 300
            +N      L VLATDEKYNEAI+S+AKRL AAIDGLPDPGGP++KDNKRESNFKT+EET
Sbjct: 241 SEN------LPVLATDEKYNEAIFSTAKRLAAAIDGLPDPGGPTVKDNKRESNFKTKEET 293

Query: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSKK 293

BLAST of Lsi11G005080 vs. TAIR10
Match: AT1G54780.1 (AT1G54780.1 thylakoid lumen 18.3 kDa protein)

HSP 1 Score: 312.8 bits (800), Expect = 2.6e-85
Identity = 188/332 (56.63%), Postives = 223/332 (67.17%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSL--RSS 60
           MET+ SP +LSP LNPKP S     P S       +SLSKP +FS      PK L  R +
Sbjct: 1   METLLSPRALSPPLNPKPLSLHQTKPTSHS-----LSLSKPTTFS-----GPKHLSTRFT 60

Query: 61  LPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVL 120
            P    W    + GLAA+A+SL L FSP+     ALASEF++LNDGPPKE++VVDDAGVL
Sbjct: 61  KPESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGI
Sbjct: 121 SRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGK 240
           VVL+TSQKEGAITGGPAFI+AVGENILDATV+ENLPV A+    +     VY        
Sbjct: 181 VVLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYN---EAVYS------- 240

Query: 241 DNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETE 300
                 R++A +             +KR                      SNFKT+EET+
Sbjct: 241 ---SAKRLVAAIDGQPDPGGPTVKDSKRE---------------------SNFKTKEETD 285

Query: 301 EKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EKRGQF+LVVGGLLVIAFVVPMAQY+AYVSRK
Sbjct: 301 EKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

BLAST of Lsi11G005080 vs. NCBI nr
Match: gi|731328366|ref|XP_010675007.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 412.9 bits (1060), Expect = 5.2e-112
Identity = 224/330 (67.88%), Postives = 259/330 (78.48%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI SP + SPLLNPKPSS+++FL   FQ R+N +  +KPIS+SLK         SSL 
Sbjct: 1   METILSPPTFSPLLNPKPSSTRSFLSPCFQPRSNSLPSTKPISYSLKKHISLPQKSSSLS 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
           +P+ W S +QHGLAA+A+SLALNFSP+L +  A ASEFDV+NDGPPKES+VVDDAGVLSR
Sbjct: 61  IPNNWLSPIQHGLAALALSLALNFSPILPSGLANASEFDVVNDGPPKESYVVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLESRKNF I+F+TVRKLTSKADAFEYADQVLE+WYP++E G+NKGIVV
Sbjct: 121 VTKSDLKRLLTDLESRKNFRINFITVRKLTSKADAFEYADQVLEKWYPSLEQGDNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDN 240
           LVTSQKEGA+TGGP+F++AVGE                 A VS               DN
Sbjct: 181 LVTSQKEGAVTGGPSFVKAVGE-------------SILDATVS---------------DN 240

Query: 241 RKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEK 300
                 L VLAT+EKYNEA+YS+AKRLVAAIDGLPDPGGP  ++NKRESNFKT+EETEEK
Sbjct: 241 ------LPVLATEEKYNEAVYSTAKRLVAAIDGLPDPGGPKFQENKRESNFKTKEETEEK 296

Query: 301 RGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           RGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 RGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

BLAST of Lsi11G005080 vs. NCBI nr
Match: gi|590643887|ref|XP_007030928.1| (Thylakoid lumen 18.3 kDa protein [Theobroma cacao])

HSP 1 Score: 408.7 bits (1049), Expect = 9.8e-111
Identity = 224/330 (67.88%), Postives = 256/330 (77.58%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI S HSLSP+LNPK S+SK+ L  S Q R+  + LSKP + +LK  +  +SL+ SL 
Sbjct: 1   METILSSHSLSPILNPKASTSKSLLSPSIQPRSASLPLSKPFTCALKKQTS-QSLKPSLA 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
            P TWF H Q GLAA+AISLALNFSP+L   NA ASEFDV+N+GPPK+S+V DDA VLSR
Sbjct: 61  EPKTWFVHAQRGLAALAISLALNFSPVLHTGNAWASEFDVINEGPPKDSYVFDDANVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDL++LL+DLESRK FHI+FVTVRKLTSKADAFEYADQVLERWYPT+E+GNNKGIVV
Sbjct: 121 VTKSDLRQLLSDLESRKTFHINFVTVRKLTSKADAFEYADQVLERWYPTLEEGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDN 240
           LVTSQKEGA+TGGPAFI+AVG                             K ++    +N
Sbjct: 181 LVTSQKEGAVTGGPAFIEAVG----------------------------EKILDATVSEN 240

Query: 241 RKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEK 300
                 L VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGP  K+NK+ESNFK+REETEEK
Sbjct: 241 ------LPVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPKFKENKKESNFKSREETEEK 295

Query: 301 RGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           RGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 RGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

BLAST of Lsi11G005080 vs. NCBI nr
Match: gi|734362466|gb|KHN16150.1| (UPF0603 protein, chloroplastic [Glycine soja])

HSP 1 Score: 398.7 bits (1023), Expect = 1.0e-107
Identity = 222/333 (66.67%), Postives = 255/333 (76.58%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           M TIF PHSLSPLLN KPS S+  L  S Q ++N +  SKPI  SL+        ++S P
Sbjct: 1   MGTIFPPHSLSPLLNIKPSPSRILLAPSPQPKSNSLFCSKPIVSSLRKN------QTSSP 60

Query: 61  VPST---WFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGV 120
            PS+   W +H Q GLAA+AISLALNFSP+L   NALASEFDVLN+GPPK+S+V DDAGV
Sbjct: 61  KPSSGTSWLAHAQQGLAALAISLALNFSPVLFNGNALASEFDVLNEGPPKDSYVFDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVT+SDLK+LL+DLESRKNF I+F+TVRKLTSKADAFEYADQVLERWYP+VE+GNNKG
Sbjct: 121 LSRVTRSDLKQLLSDLESRKNFRINFITVRKLTSKADAFEYADQVLERWYPSVEEGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRG 240
           IVVLVTSQKEGA+TGGPAF++AVG                             K ++   
Sbjct: 181 IVVLVTSQKEGAVTGGPAFVEAVG----------------------------EKILDATV 240

Query: 241 KDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREET 300
            +N      L VLATDEKYNEAI+S+AKRL AAIDGLPDPGGP++KDNKRESNFKT+EET
Sbjct: 241 SEN------LPVLATDEKYNEAIFSTAKRLAAAIDGLPDPGGPTVKDNKRESNFKTKEET 293

Query: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSKK 293

BLAST of Lsi11G005080 vs. NCBI nr
Match: gi|359806324|ref|NP_001241481.1| (uncharacterized protein LOC100813027 [Glycine max])

HSP 1 Score: 396.7 bits (1018), Expect = 3.9e-107
Identity = 221/333 (66.37%), Postives = 254/333 (76.28%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           M TIF PHSLSPLLN KPS S+  L    Q ++N +  SKPI  SL+        ++S P
Sbjct: 1   MGTIFPPHSLSPLLNIKPSPSRILLAPCPQPKSNSLFCSKPIVSSLRKN------QTSSP 60

Query: 61  VPST---WFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGV 120
            PS+   W +H Q GLAA+AISLALNFSP+L   NALASEFDVLN+GPPK+S+V DDAGV
Sbjct: 61  KPSSGTSWLAHAQQGLAALAISLALNFSPVLFNGNALASEFDVLNEGPPKDSYVFDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVT+SDLK+LL+DLESRKNF I+F+TVRKLTSKADAFEYADQVLERWYP+VE+GNNKG
Sbjct: 121 LSRVTRSDLKQLLSDLESRKNFRINFITVRKLTSKADAFEYADQVLERWYPSVEEGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRG 240
           IVVLVTSQKEGA+TGGPAF++AVG                             K ++   
Sbjct: 181 IVVLVTSQKEGAVTGGPAFVEAVG----------------------------EKILDATV 240

Query: 241 KDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREET 300
            +N      L VLATDEKYNEAI+S+AKRL AAIDGLPDPGGP++KDNKRESNFKT+EET
Sbjct: 241 SEN------LPVLATDEKYNEAIFSTAKRLAAAIDGLPDPGGPTVKDNKRESNFKTKEET 293

Query: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSKK 293

BLAST of Lsi11G005080 vs. NCBI nr
Match: gi|659070442|ref|XP_008455096.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo])

HSP 1 Score: 395.6 bits (1015), Expect = 8.6e-107
Identity = 215/266 (80.83%), Postives = 225/266 (84.59%), Query Frame = 1

Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI SPHSLSPLLNPKPSSSKN   YS Q R+NLVSLSKPIS SLKTPSPPKSLRSSLP
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSSLP 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
           VPSTWFSHLQHGLAAVAISLALNFSPLLA HNALASEFDVLNDGPPKE+HVVDDAGVLSR
Sbjct: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV
Sbjct: 121 VTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDA-----SSALVSCQVTVVYKFINF 240
           LVTSQKEGAITGGPAFIQAVGENILDATVTENLPV A     + A+ S    +V      
Sbjct: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL 240

Query: 241 RG------KDNRKQSRILAVLATDEK 256
                   KDN+++S       T+EK
Sbjct: 241 PDPGGPSFKDNKRESNFKTREETEEK 266

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
U603_ARATH4.6e-8456.63UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE... [more]
U603_ORYSI9.3e-6151.82UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_1... [more]
U603_ORYSJ9.3e-6151.82UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=O... [more]
Match NameE-valueIdentityDescription
A0A0J8CJ46_BETVU3.6e-11267.88Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g083420 PE=4 S... [more]
A0A061F263_THECC6.8e-11167.88Thylakoid lumen 18.3 kDa protein OS=Theobroma cacao GN=TCM_026607 PE=4 SV=1[more]
A0A0B2Q4D9_GLYSO7.1e-10866.67UPF0603 protein, chloroplastic OS=Glycine soja GN=glysoja_012126 PE=4 SV=1[more]
C6TM31_SOYBN2.7e-10766.37Uncharacterized protein OS=Glycine max GN=GLYMA_10G157100 PE=2 SV=1[more]
I1NIW9_SOYBN7.8e-10766.67Uncharacterized protein OS=Glycine max GN=GLYMA_20G231600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G54780.12.6e-8556.63 thylakoid lumen 18.3 kDa protein[more]
Match NameE-valueIdentityDescription
gi|731328366|ref|XP_010675007.1|5.2e-11267.88PREDICTED: UPF0603 protein At1g54780, chloroplastic [Beta vulgaris subsp. vulgar... [more]
gi|590643887|ref|XP_007030928.1|9.8e-11167.88Thylakoid lumen 18.3 kDa protein [Theobroma cacao][more]
gi|734362466|gb|KHN16150.1|1.0e-10766.67UPF0603 protein, chloroplastic [Glycine soja][more]
gi|359806324|ref|NP_001241481.1|3.9e-10766.37uncharacterized protein LOC100813027 [Glycine max][more]
gi|659070442|ref|XP_008455096.1|8.6e-10780.83PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007621TPM_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:0010206 photosystem II repair
biological_process GO:0008150 biological_process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0010114 response to red light
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009657 plastid organization
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0044436 thylakoid part
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003993 acid phosphatase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G005080.1Lsi11G005080.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007621TPM domainPFAMPF04536TPM_phosphatasecoord: 111..211
score: 2.0
NoneNo IPR availablePANTHERPTHR30373UNCHARACTERIZEDcoord: 56..214
score: 2.0E-54coord: 249..330
score: 2.0
NoneNo IPR availablePANTHERPTHR30373:SF2UPF0603 PROTEIN YGCGcoord: 56..214
score: 2.0E-54coord: 249..330
score: 2.0