CsGy2G003690 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G003690
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	UPF0603 protein At1g54780, chloroplastic
Location	Chr2 : 2503655 .. 2507606 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAATGAAAGAAATTAGACAGAGTGAAGCTGTTTTGAGGATGAAATGCCTCTTGGATTTGGAATTCAAAGAAGTAGGCGCCGGAAAGCAGAGGGTGGTGGGGGGAGGGACGGGGGACGTGGGGTTTTGGTGAGGGTTTGGAGGGTGGTGGATGCATAAAGAAAGAGGAATGGCCATAGAGAAATGAGGATAGCTTTCATATCCTCAATGAAAGAAAAAGGAAACTTTACTTGGGATTGTTTTATTCAAATTATTCAAAAGCAACCATTGATTTAAACTTCATCTTCCAAAAGGTTCCCTTTGAATATGAAAATGCATTTTCTTCTTTTATTTTTTTATTCACATATTGAAATAATAATAGTAATATATTGGTATAGTTTATAGTGTGAACAAAAGAAATATGGTATTTTATTGTGATAGTACTACAAAAATCATATGGTGAATTTGGTTGAATTCAATGGAGTTTAATATTTAACAATCTACTTACGAAGTCACTACGATAAAAGTGATTTCTTCAAATCTAAACACAAACTTAGTCAGTAGTGATAAGCGAGTTTAAAAAAATCAATCTCTCCCTCCCCACATGGATTGAACCAAATTTTGTTTTCAAAATTGAGTTAAACTCTTGTCTTGTCGGTCATGAAATATATTTTTTATCTCTGTCATTTACTTTTAAATAGGGTATTTTCAAATATAATAAAAAAATGATAAGATATTTATCTGAATAACAAAATTTTGAAAAATAATAAATATATACAAAAAGAGTATACATATATGAGGGGAAAAAATGAACAAAAAACAATTATCCATCAATGAAAATGTAGTTGAGGATCAAAATGATCTCAAAACTTTTTCATGGCTCTCATATAAACACTATCCATACTCACAAGAGTACTTTGTCCCTACCAAACATAATCCAAACCACTCAATTTCTCATGGAACCAACAGATCTTCACTCCCATTTTCCCTCTCCATTCCATGTCTCACCATATCTGAATCTCTTCTTCGTCTTCCTATGGAAACCATTCTCTCTCCTTACTCTCTTTCTCCTATTCTCAATCCCAAACCTTCCTCTTCCAAGAATCCTTCCCTCTATCATTCCACCCAACCCAGATCAAATCTTGCTTCTTTATCAAAACCCATTTCACTTTCTCTCAAAACCCCTTCTCCTCCCAAGTCTCTCCGTTCATCTCTCCCATTTCCTTCCACTTGGTTCTCCCATCTCCAACATGGGTTGGCGGCTGTAGCCATTTCTTTGGCGCTTAATTTTTCCCCGTTGTTGGCTGGTCATAATGCTCTAGCGTCTGAATTTGATGTTCTCAGTGATGGGCCGCCGAAGGAAACACATTTGGTGGACGATGCTGGAGTTCTTAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGATGAGGAAGAATTTTCATATTGATTTCGTCACTGTTAGAAAGCTCACTGTAAGTTGTTTTCTTTTATCTCCCCTTCAAATTCTAGAGAGAGAAACTGAATTCTTGTGGTTTGGAAAAGCTGTTGGGTCTTGAATGATCATTTTACTCTGCTGCGATCCAATTTGTAGAACTATTCTTGAAGTGTTTCCTTTACAGTGGAATAATTATAATTTAGAAGAATCTGTTGATGAACTTGGGGTATGTTTATAGAATTTGGAAATGTTTATAATATACATTATCAGAATGTAGGCATCATTTTGTGATGGCTTGTTTAAAATGAAGGCCATCAGAAGATTTGTAATCTCTTAAATTTACCTTTGCTGTTCTAAGGTCTTGGTTCAAGACCCGAAAGAAACCCTCGAATTCTTGGTCAAAGTTCAAAAGTAAAAAAGCCTACTTTTTTAGTTTTTAAAACCTGACTTAATTTTTAAAAGCATCATAGAAACTAGAAACTGGGTAACAAAGGATAGAAACTTATAGGTGGAATGGAGAATGTGTTTTATGAGCTTAACTATTAAAGACCAAACGATTATCAAATAAGGCCGTGATAACCCGTATTGTCTCTCAAGAGTAGTCTTCGGTGGGGAAAGCTTCTCCAAATAGTGAACCTATGGTATTATGTACACACTAAAATAATGAAAAGGGAGATGTACGAAGTCTGATATGAATTAATAACCTGGTGGCCGTAGAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGCTGGTATCCCACGGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCTATTACTGGTGGCCCTGCCTTTATCCAAGCTGTTGGAGAAAATATTCTTGATGCCACAGTAACAGAGAATCTCCCAGGTAAACTAACTACCACTTATTTCACTCTTCACTCTCATCACATTGAACAAAACTCCCACCTCAAGCAGTTATTTTAATTTCCTCAGCCTTTTCAGCCAACAATTTCTACTACCTCTTTCTAAACTTCATTTTTAACTCATTCACAACTAGTAGATGCCTTAAATCTACTTGTATCTTATAGTTGAACTTCAAAGTGAGTGTATGTGTTTGATGTGACGATCTCGTATCCCATCATGTGTCAATATCCTTCCCAACTAGTAGTTATTACTTCATTGTTTTTCAAACTGTAACTAACTAAGATTGTTGCTTGTGTAACTGCAGTCTTAGCTACCGATGAAAAATATAATGAAGCCATATACAGCAGTGCAAAGCGGCTAGTGGCTGCCATTGATGGCCTTCCAGATACAGGTGGCCCTTCATTTAAAGATAATAAGCGTGAATCGAACTTCAAAACAAGGGAAGAAACCGAGGAGAAACGAGGACAGTTTACTCTTGTAGTTGGAGGTTTGTTAGTCATAGCCTTTATTGTTCCTATGGCTCAATACTATGCTTATATATCCAAGAAGTAACAGAAATGTGTAAGAGGCAGATCTTCCCATCTATTTTTTTCTCATTCAAATGTATAACATTGATGTTGTACAAAGAGGATCGCTACAAGATGATTGGCAAGAAACCTGTTATAAAACAAGAGTTTGAGTTATTTCTATGGCTATCACCTTTAATTTCAAGAAGATTTTTATCCACCCTTAAGTTAACTTTTCACATTTTCAAGACTAAGAGAGAAAGAGAGAGTGTACCTCTCTATGATGTTCCAAGAATTGTTTAAAATCATTATAATTTTTTTATTTAGGTACACAATATATACAGTGTCTAAACGTAAGTGCATTGTTGGTCGTATCTTTATTTCACTTCCCTACATTTAGACACATTAGGATGGCAAAGATATCATGGAGATGAAATTTATAAAATCAAGCCTAGAACTTGAGCTTGAGAAGGAAAGGCATTTTGTCTGAGAAGGGTGGATCAGAATACTTTCCAGTGAGTATTTGTGATGACACATACTTATTTGCAGCTTCACTGTAATGAATTCCATCCCAATTGATGTACTCCGAGCTATCATCACATCCTTTCGCTGTGACCACTGTGCCGTTCAATATCTTAGTTTGCCCACAGATGATTCTGCTGTCGTAGTTGAGTGGTGGACCTCCATAGCCACAACAAGCCATAATAGGTTGTTCAAAACCTGCCAACAACCAATGCAAAAAGTTGTTTCGTCACATGATTAACAGCAAATTAGGCCAAATTATGTACACAAAAACACTCTAAGATGCTAACCGAATCGGGAATAATTGGCAATGAGATTGGATTTTATTGTATAGATATCAACATATGTGACATTCGTATCTGTATATTCTTCTTGTAGTTCTTTGCAGAGAGCATGGAGTTGTAGATTGAAAAGCTTGGCAGCTTGGTTGTGCGAACTGACGCATCCAAGTTCATCAAGGTTTGATGGGTCAGTTCCGAATCTAGCAACATTTTGAGCCAAACATCCAAGAGGACCAGTGTTGTGTATCCAGAAATTCCTAGCCCCTTGGTCGTACAATTTCTGAA

mRNA sequence

TGGAATGAAAGAAATTAGACAGAGTGAAGCTGTTTTGAGGATGAAATGCCTCTTGGATTTGGAATTCAAAGAAGTAGGCGCCGGAAAGCAGAGGGTGGTGGGGGGAGGGACGGGGGACGTGGGGTTTTGGTGAGGGTTTGGAGGGTGGTGGATGCATAAAGAAAGAGGAATGGCCATAGAGAAATGAGGATAGCTTTCATATCCTCAATGAAAGAAAAAGGAAACTTTACTTGGGATTGTTTTATTCAAATTATTCAAAAGCAACCATTGATTTAAACTTCATCTTCCAAAAGGTTCCCTTTGAATATGAAAATGCATTTTCTTCTTTTATTTTTTTATTCACATATTGAAATAATAATAGTAATATATTGGTATAGTTTATAGTGTGAACAAAAGAAATATGGTATTTTATTGTGATAGTACTACAAAAATCATATGGTGAATTTGGTTGAATTCAATGGAGTTTAATATTTAACAATCTACTTACGAAGTCACTACGATAAAAGTGATTTCTTCAAATCTAAACACAAACTTAGTCAGTAGTGATAAGCGAGTTTAAAAAAATCAATCTCTCCCTCCCCACATGGATTGAACCAAATTTTGTTTTCAAAATTGAGTTAAACTCTTGTCTTGTCGGTCATGAAATATATTTTTTATCTCTGTCATTTACTTTTAAATAGGGTATTTTCAAATATAATAAAAAAATGATAAGATATTTATCTGAATAACAAAATTTTGAAAAATAATAAATATATACAAAAAGAGTATACATATATGAGGGGAAAAAATGAACAAAAAACAATTATCCATCAATGAAAATGTAGTTGAGGATCAAAATGATCTCAAAACTTTTTCATGGCTCTCATATAAACACTATCCATACTCACAAGAGTACTTTGTCCCTACCAAACATAATCCAAACCACTCAATTTCTCATGGAACCAACAGATCTTCACTCCCATTTTCCCTCTCCATTCCATGTCTCACCATATCTGAATCTCTTCTTCGTCTTCCTATGGAAACCATTCTCTCTCCTTACTCTCTTTCTCCTATTCTCAATCCCAAACCTTCCTCTTCCAAGAATCCTTCCCTCTATCATTCCACCCAACCCAGATCAAATCTTGCTTCTTTATCAAAACCCATTTCACTTTCTCTCAAAACCCCTTCTCCTCCCAAGTCTCTCCGTTCATCTCTCCCATTTCCTTCCACTTGGTTCTCCCATCTCCAACATGGGTTGGCGGCTGTAGCCATTTCTTTGGCGCTTAATTTTTCCCCGTTGTTGGCTGGTCATAATGCTCTAGCGTCTGAATTTGATGTTCTCAGTGATGGGCCGCCGAAGGAAACACATTTGGTGGACGATGCTGGAGTTCTTAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGATGAGGAAGAATTTTCATATTGATTTCGTCACTGTTAGAAAGCTCACTTGGAATAATTATAATTTAGAAGAATCTGTTGATGAACTTGGGAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGCTGGTATCCCACGGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCTATTACTGGTGGCCCTGCCTTTATCCAAGCTGTTGGAGAAAATATTCTTGATGCCACAGTAACAGAGAATCTCCCAGTCTTAGCTACCGATGAAAAATATAATGAAGCCATATACAGCAGTGCAAAGCGGCTAGTGGCTGCCATTGATGGCCTTCCAGATACAGGTGGCCCTTCATTTAAAGATAATAAGCGTGAATCGAACTTCAAAACAAGGGAAGAAACCGAGGAGAAACGAGGACAGTTTACTCTTGTAGTTGGAGGTTTGTTAGTCATAGCCTTTATTGTTCCTATGGCTCAATACTATGCTTATATATCCAAGAAGTAACAGAAATGTGTAAGAGGCAGATCTTCCCATCTATTTTTTTCTCATTCAAATGTATAACATTGATGTTGTACAAAGAGGATCGCTACAAGATGATTGGCAAGAAACCTGTTATAAAACAAGAGTTTGAGTTATTTCTATGGCTATCACCTTTAATTTCAAGAAGATTTTTATCCACCCTTAAGTTAACTTTTCACATTTTCAAGACTAAGAGAGAAAGAGAGAGTGTACCTCTCTATGATGTTCCAAGAATTGTTTAAAATCATTATAATTTTTTTATTTAGGTACACAATATATACAGTGTCTAAACGTAAGTGCATTGTTGGTCGTATCTTTATTTCACTTCCCTACATTTAGACACATTAGGATGGCAAAGATATCATGGAGATGAAATTTATAAAATCAAGCCTAGAACTTGAGCTTGAGAAGGAAAGGCATTTTGTCTGAGAAGGGTGGATCAGAATACTTTCCAGTGAGTATTTGTGATGACACATACTTATTTGCAGCTTCACTGTAATGAATTCCATCCCAATTGATGTACTCCGAGCTATCATCACATCCTTTCGCTGTGACCACTGTGCCGTTCAATATCTTAGTTTGCCCACAGATGATTCTGCTGTCGTAGTTGAGTGGTGGACCTCCATAGCCACAACAAGCCATAATAGGTTGTTCAAAACCTGCCAACAACCAATGCAAAAAGTTGTTTCGTCACATGATTAACAGCAAATTAGGCCAAATTATGTACACAAAAACACTCTAAGATGCTAACCGAATCGGGAATAATTGGCAATGAGATTGGATTTTATTGTATAGATATCAACATATGTGACATTCGTATCTGTATATTCTTCTTGTAGTTCTTTGCAGAGAGCATGGAGTTGTAGATTGAAAAGCTTGGCAGCTTGGTTGTGCGAACTGACGCATCCAAGTTCATCAAGGTTTGATGGGTCAGTTCCGAATCTAGCAACATTTTGAGCCAAACATCCAAGAGGACCAGTGTTGTGTATCCAGAAATTCCTAGCCCCTTGGTCGTACAATTTCTGAA

Coding sequence (CDS)

ATGAACAAAAAACAATTATCCATCAATGAAAATGTAGTTGAGGATCAAAATGATCTCAAAACTTTTTCATGGCTCTCATATAAACACTATCCATACTCACAAGAGTACTTTGTCCCTACCAAACATAATCCAAACCACTCAATTTCTCATGGAACCAACAGATCTTCACTCCCATTTTCCCTCTCCATTCCATGTCTCACCATATCTGAATCTCTTCTTCGTCTTCCTATGGAAACCATTCTCTCTCCTTACTCTCTTTCTCCTATTCTCAATCCCAAACCTTCCTCTTCCAAGAATCCTTCCCTCTATCATTCCACCCAACCCAGATCAAATCTTGCTTCTTTATCAAAACCCATTTCACTTTCTCTCAAAACCCCTTCTCCTCCCAAGTCTCTCCGTTCATCTCTCCCATTTCCTTCCACTTGGTTCTCCCATCTCCAACATGGGTTGGCGGCTGTAGCCATTTCTTTGGCGCTTAATTTTTCCCCGTTGTTGGCTGGTCATAATGCTCTAGCGTCTGAATTTGATGTTCTCAGTGATGGGCCGCCGAAGGAAACACATTTGGTGGACGATGCTGGAGTTCTTAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGATGAGGAAGAATTTTCATATTGATTTCGTCACTGTTAGAAAGCTCACTTGGAATAATTATAATTTAGAAGAATCTGTTGATGAACTTGGGAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGCTGGTATCCCACGGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCTATTACTGGTGGCCCTGCCTTTATCCAAGCTGTTGGAGAAAATATTCTTGATGCCACAGTAACAGAGAATCTCCCAGTCTTAGCTACCGATGAAAAATATAATGAAGCCATATACAGCAGTGCAAAGCGGCTAGTGGCTGCCATTGATGGCCTTCCAGATACAGGTGGCCCTTCATTTAAAGATAATAAGCGTGAATCGAACTTCAAAACAAGGGAAGAAACCGAGGAGAAACGAGGACAGTTTACTCTTGTAGTTGGAGGTTTGTTAGTCATAGCCTTTATTGTTCCTATGGCTCAATACTATGCTTATATATCCAAGAAGTAA

Protein sequence

MNKKQLSINENVVEDQNDLKTFSWLSYKHYPYSQEYFVPTKHNPNHSISHGTNRSSLPFSLSIPCLTISESLLRLPMETILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSLPFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLSRVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQYYAYISKK

Homology

[Close]

BLAST of CsGy2G003690 vs. NCBI nr
Match: XP_004139197.1 (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis sativus] >KGN60868.1 hypothetical protein Csa_2G020910 [Cucumis sativus])

HSP 1 Score: 563.9 bits (1452), Expect = 4.2e-157
Identity = 297/311 (95.50%), Postives = 297/311 (95.50%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS
Sbjct: 61  PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLT              SKADAFEYADQVLER
Sbjct: 121 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLT--------------SKADAFEYADQVLER 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA
Sbjct: 181 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP
Sbjct: 241 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 297

Query: 377 MAQYYAYISKK 388
           MAQYYAYISKK
Sbjct: 301 MAQYYAYISKK 297

[Close]

BLAST of CsGy2G003690 vs. NCBI nr
Match: XP_022999120.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 542.3 bits (1396), Expect = 1.3e-150
Identity = 295/359 (82.17%), Postives = 309/359 (86.07%), Query Frame = 0


Query: 32  YSQEYFVPTKHNPNHSISHGTNRSSLPFSLSIPCLTISESLLRLPMETILSPYSLSPILN 91
           + QEY    K  PNHSISHGTN  S PF L  PCLTISES L LPMETILSP++LSP+LN
Sbjct: 5   HPQEYLSLPKKIPNHSISHGTNTPSTPFPLCNPCLTISES-LHLPMETILSPHTLSPLLN 64

Query: 92  PKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPP---KSLRSSLPFPSTWFSHLQH 151
           PKPSS KN   Y S QPR +  S S PIS SLKTPSP     SLRSSLP PS WFSHLQH
Sbjct: 65  PKPSSPKNLFPY-SFQPRRHFVSFSNPISFSLKTPSPKSLRSSLRSSLPVPSNWFSHLQH 124

Query: 152 GLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLSRVTKSDLKRLLT 211
           GLAA+AISLALNFSPLLA HNALASEFDVL+DGPPKE+HLVDDAGVLSRVTKSDLKRLLT
Sbjct: 125 GLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGVLSRVTKSDLKRLLT 184

Query: 212 DLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLERWYPTVEDGNNKG 271
           DLE+RKNFHIDFVTVRKLT              SKADAFEYADQVLERWYPTVEDGNNKG
Sbjct: 185 DLELRKNFHIDFVTVRKLT--------------SKADAFEYADQVLERWYPTVEDGNNKG 244

Query: 272 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 331
           IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI
Sbjct: 245 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 304

Query: 332 DGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQYYAYISKK 388
           DGLPD GGPSFK+NKRESNFK+REETEEKRGQF+LVVGGLLVIAF+VPMAQYYAY+SKK
Sbjct: 305 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 347

[Close]

BLAST of CsGy2G003690 vs. NCBI nr
Match: XP_008455096.1 (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo])

HSP 1 Score: 536.2 bits (1380), Expect = 9.3e-149
Identity = 284/311 (91.32%), Postives = 291/311 (93.57%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           METILSP+SLSP+LNPKPSSSKN SLY STQPRSNL SLSKPISLSLKTPSPPKSLRSSL
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLY-STQPRSNLVSLSKPISLSLKTPSPPKSLRSSL 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           P PSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVL+DGPPKETH+VDDAGVLS
Sbjct: 61  PVPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVTKSDLKRLLTDLE RKNFHIDFVTVRKLT              SKADAFEYADQVLER
Sbjct: 121 RVTKSDLKRLLTDLETRKNFHIDFVTVRKLT--------------SKADAFEYADQVLER 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA
Sbjct: 181 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           IYSSAKRLVAAIDGLPD GGPSFKDNKRESNFKTREETEEKRGQF+LVVGGLLVIAF+VP
Sbjct: 241 IYSSAKRLVAAIDGLPDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVP 296

Query: 377 MAQYYAYISKK 388
           MAQYYAY+SKK
Sbjct: 301 MAQYYAYVSKK 296

[Close]

BLAST of CsGy2G003690 vs. NCBI nr
Match: XP_022946287.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 496.5 bits (1277), Expect = 8.1e-137
Identity = 266/311 (85.53%), Postives = 278/311 (89.39%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           METILSP++LSP+LNPKPSS KN   Y S QPR +  S S PIS SLK PS PKSLRSSL
Sbjct: 1   METILSPHTLSPLLNPKPSSPKNLFPY-SFQPRRHFVSFSNPISFSLKNPS-PKSLRSSL 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           P PS WFSHLQHGLAA+AISLALNFSPLLA HNALASEFDVL+DGPPKE+HLVDDAGVLS
Sbjct: 61  PVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVTKSDLKRLLTDLE RKNFHIDFVTVRKLT              SKADAFEYADQVLER
Sbjct: 121 RVTKSDLKRLLTDLESRKNFHIDFVTVRKLT--------------SKADAFEYADQVLER 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA
Sbjct: 181 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           IYSSAKRLVAAIDGLPD GGPSFK+NKRESNFK+REETEEKRGQF+LVVGGLLVIAF+VP
Sbjct: 241 IYSSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVP 295

Query: 377 MAQYYAYISKK 388
           MAQYYAY+SKK
Sbjct: 301 MAQYYAYVSKK 295

[Close]

BLAST of CsGy2G003690 vs. NCBI nr
Match: XP_022150734.1 (UPF0603 protein At1g54780, chloroplastic [Momordica charantia])

HSP 1 Score: 493.4 bits (1269), Expect = 6.9e-136
Identity = 270/314 (85.99%), Postives = 281/314 (89.49%), Query Frame = 0


Query: 77  METILSPY--SLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRS 136
           METILSP+  SLSP+L+PK SSSKN  L HS QPRS   S SKPISL+LK PS P+SLRS
Sbjct: 1   METILSPHSLSLSPLLSPKASSSKN-LLPHSLQPRSKFVSFSKPISLTLKKPS-PQSLRS 60

Query: 137 SLPFPSTWFSHLQHGLAAVAISLALNFSPLLA-GHNALASEFDVLSDGPPKETHLVDDAG 196
           SLP PS WFSHLQHGLAA+AISLALNFSPLLA G NALASEFDVLSDGPPKE+HLVDDAG
Sbjct: 61  SLPIPSNWFSHLQHGLAALAISLALNFSPLLAGGGNALASEFDVLSDGPPKESHLVDDAG 120

Query: 197 VLSRVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQV 256
           VLSRVTKSDLKRLL+DLE RKNFHIDFVTVRKLT              SKADAFEYADQV
Sbjct: 121 VLSRVTKSDLKRLLSDLESRKNFHIDFVTVRKLT--------------SKADAFEYADQV 180

Query: 257 LERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKY 316
           LERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKY
Sbjct: 181 LERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKY 240

Query: 317 NEAIYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAF 376
           NEAIYSSAKRLVAAIDGLPD GGPSFKDNKRESNFKTREETEEKRGQF+LVVGGLLVIAF
Sbjct: 241 NEAIYSSAKRLVAAIDGLPDAGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAF 298

Query: 377 IVPMAQYYAYISKK 388
           +VPMAQYYAY+SKK
Sbjct: 301 VVPMAQYYAYVSKK 298

[Close]

BLAST of CsGy2G003690 vs. TAIR10
Match: AT1G54780.1 (thylakoid lumen 18.3 kDa protein)

HSP 1 Score: 377.9 bits (969), Expect = 7.7e-105
Identity = 206/311 (66.24%), Postives = 242/311 (77.81%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           MET+LSP +LSP LNPKP S       H T+P S+  SLS     S            + 
Sbjct: 1   METLLSPRALSPPLNPKPLS------LHQTKPTSHSLSLSXXXXFS---GXXXXXXXXTK 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           P    W    + GLAA+A+SL L FSP+     ALASEF++L+DGPPKET++VDDAGVLS
Sbjct: 61  PESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVTKSDLK+LL+DLE RK   ++F+TVRKLT              SKADAFEYADQVLE+
Sbjct: 121 RVTKSDLKKLLSDLEYRKKLRLNFITVRKLT--------------SKADAFEYADQVLEK 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYP++E+GNNKGIVVL+TSQKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA
Sbjct: 181 WYPSIEEGNNKGIVVLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           +YSSAKRLVAAIDG PD GGP+ KD+KRESNFKT+EET+EKRGQF+LVVGGLLVIAF+VP
Sbjct: 241 VYSSAKRLVAAIDGQPDPGGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVP 285

Query: 377 MAQYYAYISKK 388
           MAQY+AY+S+K
Sbjct: 301 MAQYFAYVSRK 285

[Close]

BLAST of CsGy2G003690 vs. Swiss-Prot
Match: sp|Q9ZVL6|U603_ARATH (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g54780 PE=1 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.4e-103
Identity = 206/311 (66.24%), Postives = 242/311 (77.81%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           MET+LSP +LSP LNPKP S       H T+P S+  SLS     S            + 
Sbjct: 1   METLLSPRALSPPLNPKPLS------LHQTKPTSHSLSLSXXXXFS---GXXXXXXXXTK 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           P    W    + GLAA+A+SL L FSP+     ALASEF++L+DGPPKET++VDDAGVLS
Sbjct: 61  PESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVTKSDLK+LL+DLE RK   ++F+TVRKLT              SKADAFEYADQVLE+
Sbjct: 121 RVTKSDLKKLLSDLEYRKKLRLNFITVRKLT--------------SKADAFEYADQVLEK 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYP++E+GNNKGIVVL+TSQKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA
Sbjct: 181 WYPSIEEGNNKGIVVLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           +YSSAKRLVAAIDG PD GGP+ KD+KRESNFKT+EET+EKRGQF+LVVGGLLVIAF+VP
Sbjct: 241 VYSSAKRLVAAIDGQPDPGGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVP 285

Query: 377 MAQYYAYISKK 388
           MAQY+AY+S+K
Sbjct: 301 MAQYFAYVSRK 285

[Close]

BLAST of CsGy2G003690 vs. Swiss-Prot
Match: sp|A2Y4G9|U603_ORYSI (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19898 PE=3 SV=2)

HSP 1 Score: 345.5 bits (885), Expect = 7.6e-94
Identity = 180/247 (72.87%), Postives = 202/247 (81.78%), Query Frame = 0


Query: 141 TWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLSRVTK 200
           +W + LQHGLA                     SEFDVL+ GPP++T++VDDAGVLSRVTK
Sbjct: 69  SWATFLQHGLA--XXXXXXXXXXXXXXXXXXXSEFDVLNGGPPEDTYVVDDAGVLSRVTK 128

Query: 201 SDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLERWYPT 260
           SD+KRL+ DLE RKN  I+F+TVRKLT              SKADAFEYADQVLE+WYPT
Sbjct: 129 SDVKRLVRDLESRKNIRINFITVRKLT--------------SKADAFEYADQVLEKWYPT 188

Query: 261 VEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSS 320
           VE+GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++
Sbjct: 189 VEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTT 248

Query: 321 AKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQY 380
           AKRL AAIDGLPD GGP+FKDNKRESNFKT+EETEEKRGQFTLVVGGLLVIAF+VPMAQY
Sbjct: 249 AKRLAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQY 299

Query: 381 YAYISKK 388
           YAYISKK
Sbjct: 309 YAYISKK 299

[Close]

BLAST of CsGy2G003690 vs. Swiss-Prot
Match: sp|Q6ATY4|U603_ORYSJ (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0401100 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 7.6e-94
Identity = 180/247 (72.87%), Postives = 202/247 (81.78%), Query Frame = 0


Query: 141 TWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLSRVTK 200
           +W + LQHGLA                     SEFDVL+ GPP++T++VDDAGVLSRVTK
Sbjct: 69  SWATFLQHGLA--XXXXXXXXXXXXXXXXXXXSEFDVLNGGPPEDTYVVDDAGVLSRVTK 128

Query: 201 SDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLERWYPT 260
           SD+KRL+ DLE RKN  I+F+TVRKLT              SKADAFEYADQVLE+WYPT
Sbjct: 129 SDVKRLVRDLESRKNIRINFITVRKLT--------------SKADAFEYADQVLEKWYPT 188

Query: 261 VEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSS 320
           VE+GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++
Sbjct: 189 VEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTT 248

Query: 321 AKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQY 380
           AKRL AAIDGLPD GGP+FKDNKRESNFKT+EETEEKRGQFTLVVGGLLVIAF+VPMAQY
Sbjct: 249 AKRLAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQY 299

Query: 381 YAYISKK 388
           YAYISKK
Sbjct: 309 YAYISKK 299

[Close]

BLAST of CsGy2G003690 vs. TrEMBL
Match: tr|A0A0A0LGA5|A0A0A0LGA5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020910 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 2.7e-157
Identity = 297/311 (95.50%), Postives = 297/311 (95.50%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS
Sbjct: 61  PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLT              SKADAFEYADQVLER
Sbjct: 121 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLT--------------SKADAFEYADQVLER 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA
Sbjct: 181 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP
Sbjct: 241 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 297

Query: 377 MAQYYAYISKK 388
           MAQYYAYISKK
Sbjct: 301 MAQYYAYISKK 297

[Close]

BLAST of CsGy2G003690 vs. TrEMBL
Match: tr|A0A1S3C0U8|A0A1S3C0U8_CUCME (UPF0603 protein At1g54780, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495349 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 6.1e-149
Identity = 284/311 (91.32%), Postives = 291/311 (93.57%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           METILSP+SLSP+LNPKPSSSKN SLY STQPRSNL SLSKPISLSLKTPSPPKSLRSSL
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLY-STQPRSNLVSLSKPISLSLKTPSPPKSLRSSL 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           P PSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVL+DGPPKETH+VDDAGVLS
Sbjct: 61  PVPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVTKSDLKRLLTDLE RKNFHIDFVTVRKLT              SKADAFEYADQVLER
Sbjct: 121 RVTKSDLKRLLTDLETRKNFHIDFVTVRKLT--------------SKADAFEYADQVLER 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA
Sbjct: 181 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           IYSSAKRLVAAIDGLPD GGPSFKDNKRESNFKTREETEEKRGQF+LVVGGLLVIAF+VP
Sbjct: 241 IYSSAKRLVAAIDGLPDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVP 296

Query: 377 MAQYYAYISKK 388
           MAQYYAY+SKK
Sbjct: 301 MAQYYAYVSKK 296

[Close]

BLAST of CsGy2G003690 vs. TrEMBL
Match: tr|A0A2P4HCJ9|A0A2P4HCJ9_QUESU (Upf0603 protein, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_66735 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.2e-122
Identity = 237/311 (76.21%), Postives = 272/311 (87.46%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           METILSP SLSP+ NPKPSS K  +L  S QP+SN  SL+KPI+ SLK     + L+ SL
Sbjct: 1   METILSPRSLSPLFNPKPSSPK--TLVSSLQPKSNSLSLTKPITSSLK-KHQLQFLKPSL 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           P P++WFS+ Q GLAA+A++LALNFSPLL+  NALASEFDV+++GPPKET++VDDAGVLS
Sbjct: 61  PIPTSWFSYAQQGLAALALTLALNFSPLLSSGNALASEFDVINEGPPKETYVVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVT+SDLKRLL+DLE RKNFHI+FVTVRKLT              SKADAFEYADQVLER
Sbjct: 121 RVTRSDLKRLLSDLESRKNFHINFVTVRKLT--------------SKADAFEYADQVLER 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYP+VE+GN+KGIVVLVTSQKEGAITGGPAF+QAVGENILDATV+ENLPVLAT+EKYNEA
Sbjct: 181 WYPSVEEGNDKGIVVLVTSQKEGAITGGPAFVQAVGENILDATVSENLPVLATEEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           +YSSAKRLVAAIDGLPD GGP+FKDNKRESNFKT+EETEEKRGQF+LVVGGLLVIAF+VP
Sbjct: 241 VYSSAKRLVAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVP 294

Query: 377 MAQYYAYISKK 388
           MAQYYAY+S+K
Sbjct: 301 MAQYYAYVSRK 294

[Close]

BLAST of CsGy2G003690 vs. TrEMBL
Match: tr|A0A2N9J993|A0A2N9J993_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29479 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 4.1e-121
Identity = 235/311 (75.56%), Postives = 266/311 (85.53%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           METILSP+SLSP+ NPKPSS K   L  S QPRSN  SL+KPI+ SLK    P+SL+ SL
Sbjct: 1   METILSPHSLSPLFNPKPSSPKT-LLSSSLQPRSNSLSLTKPITSSLK-KHKPQSLKPSL 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           P P+ WFS+ Q GL A+A++LALNFSPLL   NALASEFDVL+ GPPKE+++VDDAGVLS
Sbjct: 61  PIPTNWFSYAQQGLTALALTLALNFSPLLPSGNALASEFDVLNQGPPKESYVVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVT+SDLK LL+DLE RKNFHI+FVTVRKLT              SKADAFEYADQVLER
Sbjct: 121 RVTRSDLKSLLSDLESRKNFHINFVTVRKLT--------------SKADAFEYADQVLER 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYP+VEDGN+KGIVVLVTSQKEGA+TGGPAF+QAVGE+ILDATV+ENLPVLAT+EKYNEA
Sbjct: 181 WYPSVEDGNDKGIVVLVTSQKEGAVTGGPAFVQAVGESILDATVSENLPVLATEEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           +YSSAKRLVAAIDGLPD GGP F +NKRESNFKT+EETEEKRGQF LVVGGLLVIAF+VP
Sbjct: 241 VYSSAKRLVAAIDGLPDPGGPKFNENKRESNFKTKEETEEKRGQFALVVGGLLVIAFVVP 295

Query: 377 MAQYYAYISKK 388
           MAQYYAY+S+K
Sbjct: 301 MAQYYAYVSRK 295

[Close]

BLAST of CsGy2G003690 vs. TrEMBL
Match: tr|A0A2R6QL97|A0A2R6QL97_ACTCH (UPF0603 protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17243 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 4.6e-120
Identity = 236/311 (75.88%), Postives = 265/311 (85.21%), Query Frame = 0


Query: 77  METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 136
           METILSP+S  P+LNPK SS K+  L  S QPRS   S +K IS SLK    P+S+  SL
Sbjct: 1   METILSPHS-CPLLNPKTSSPKS-LLSPSLQPRSKSHSTTKTISCSLK-KQLPQSINQSL 60

Query: 137 PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 196
           P P TWFSH+QHGLAA+A+SLALNF P+L   +A ASEFDVLSDGPP+ET++VDDAGVLS
Sbjct: 61  PIPKTWFSHVQHGLAALALSLALNFCPILNSGSAFASEFDVLSDGPPEETYVVDDAGVLS 120

Query: 197 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTWNNYNLEESVDELGSKADAFEYADQVLER 256
           RVTKSDLKRLL+DLE RKNFHI+F+TVRKLT              SKADAFEYADQVLER
Sbjct: 121 RVTKSDLKRLLSDLESRKNFHINFITVRKLT--------------SKADAFEYADQVLER 180

Query: 257 WYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEA 316
           WYPT+EDG+NKGIVVLVTSQKEGAITGGP F++AVG++ILDATV+ENLPVLAT+EKYNEA
Sbjct: 181 WYPTIEDGSNKGIVVLVTSQKEGAITGGPDFVKAVGDSILDATVSENLPVLATEEKYNEA 240

Query: 317 IYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVP 376
           +YSSAKRLVAAIDGLPD GGP FKDNKRESNFKT+EETEEKRGQFTLVVGGLLVIAF+VP
Sbjct: 241 VYSSAKRLVAAIDGLPDPGGPQFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVP 294

Query: 377 MAQYYAYISKK 388
           MAQYYAY+SKK
Sbjct: 301 MAQYYAYVSKK 294

The following BLAST results are available for this feature:

BLAST of CsGy2G003690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139197.1	4.2e-157	95.50	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis sativus] >KGN60868....	[more]
XP_022999120.1	1.3e-150	82.17	UPF0603 protein At1g54780, chloroplastic-like [Cucurbita maxima]	[more]
XP_008455096.1	9.3e-149	91.32	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo]	[more]
XP_022946287.1	8.1e-137	85.53	UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata]	[more]
XP_022150734.1	6.9e-136	85.99	UPF0603 protein At1g54780, chloroplastic [Momordica charantia]	[more]

BLAST of CsGy2G003690 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54780.1	7.7e-105	66.24	thylakoid lumen 18.3 kDa protein	[more]

BLAST of CsGy2G003690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZVL6\|U603_ARATH	1.4e-103	66.24	UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
sp\|A2Y4G9\|U603_ORYSI	7.6e-94	72.87	UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946...	[more]
sp\|Q6ATY4\|U603_ORYSJ	7.6e-94	72.87	UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of CsGy2G003690 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LGA5\|A0A0A0LGA5_CUCSA	2.7e-157	95.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020910 PE=4 SV=1	[more]
tr\|A0A1S3C0U8\|A0A1S3C0U8_CUCME	6.1e-149	91.32	UPF0603 protein At1g54780, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495349...	[more]
tr\|A0A2P4HCJ9\|A0A2P4HCJ9_QUESU	2.2e-122	76.21	Upf0603 protein, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_66735 PE=4 SV=...	[more]
tr\|A0A2N9J993\|A0A2N9J993_FAGSY	4.1e-121	75.56	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29479 PE=4 SV=1	[more]
tr\|A0A2R6QL97\|A0A2R6QL97_ACTCH	4.6e-120	75.88	UPF0603 protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc172...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007621	TPM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G003690.1	CsGy2G003690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.310.50		coord: 171..337 e-value: 8.7E-22 score: 79.0
None	No IPR available	PANTHER	PTHR30373:SF6	SUBFAMILY NOT NAMED	coord: 77..387
None	No IPR available	PANTHER	PTHR30373	UNCHARACTERIZED	coord: 77..387
IPR007621	TPM domain	PFAM	PF04536	TPM_phosphatase	coord: 189..325 e-value: 1.1E-15 score: 57.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G003690	Cla019859	Watermelon (97103) v1	cgybwmB140
CsGy2G003690	Csa2G020910	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G003690	MELO3C004307	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G003690	ClCG02G016070	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G003690	CSPI02G03580	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G003690	CmaCh12G010900	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G003690	CmoCh12G011070	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G003690	Lsi11G005080	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G003690	Cp4.1LG07g09290	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G003690	MELO3C004307.2	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G003690	CsaV3_2G004910	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G003690	Cla97C02G041870	Watermelon (97103) v2	cgybwmbB114
CsGy2G003690	Carg17563	Silver-seed gourd	carcgybB0713

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G003690	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G003690	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G003690	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G003690	Silver-seed gourd	carcgybB0890