Cp4.1LG11g09490 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g09490
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Thylakoid lumen 18.3 kDa protein
Location	Cp4.1LG11 : 8065475 .. 8069779 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCCTTGGACACTGAAAAAAAGGAGGGGAAGAAATTGATCTTTGCTAAAGAAGAAAGAAAGTTGTGGGCAAGAGAGTAGTTGTCCCTACCAAAGAAAATCCCAAACCACTCAATTCCTCATGGAACCAACACACCTTCAACCCCATTTCCCCTCTGCAATCCATGTCTCACCATATCTGAATCTCTCCATCTTCCCATGGAAACCATTCTCTCTCCACACACTCTCTCTCCTCTCCTCAACCCCAAACCCTCCTCTCCCAAGAATCTCTTCCCTTATTCCTTCCAACCCAGAAGACATTTTNGTAAGCAGGGATAACACGCCTACCCCTTGGACACTGAAAAAAAGGAGGGGAAGAAATTGATCTTTGCTAAAGAAGAAAGAAAGTTGTGGGCAAGAGAGTAGTTGTCCCTACCAAAGAAAATCCCAAACCACTCAATTCCTCATGGAACCAACACACCTTCAACCCCATTTCCCCTCTGCAATCCATGTCTCACCATATCTGAATCTCTCCATCTTCCCATGGAAACCATTCTCTCTTCACACACACTCTCTCCTCTCCTCAACCCCAAACCCTCCTCTCCCAAGAATCTCTTCCCTTATTCCTTCCAACCCAGAAGACATTTTGTTTCTTTCTCTAACCCCATTTCGTTCTCTCTCAAAAACCACTCTCCCAAGTCTCTCCGATCATCTCTCCGATCATCTCTCCCAGTTCCCTCGAATTGGTTCTCCCATCTCCAACATGGGTTGGCGGCGCTAGCAATTTCTTTAGCGCTCAACTTTTCCCCATTGTTGGCCACCCACAATGCTCTGGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTAGTGGACGATGCTGGAGTTCTCAGTAGAGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTCGAGGAAGAATTTTCACATTGATTTTGTCACTGTTAGAAAGCTTACTGTAAGTCCTTCAAATTCTTGATAGAGAAACAAATCGTAGAACCCATGAAAAATAATTTGATTTTTGTTATTATGGGAAGAGAATTGTACTTTATGTTAGAGGAAATGTGTTAATAGGCTGATGATTGTTTATGAAGATTTGAAAATCTTACTGAAGAGTGATTATCAGAAAGTGGGTATCATATTGTGATAGATTGTTTGAAATGAAGGCTACCAAAACTTGGAATGTCTAGAGATATCACCTTTAACCTAAGGTCTTGGTTTAAGCTCTTTGGGGGAAACTTAGTAATCCTTCTTGTCTCTCAAGGTTGGTTTTGGTTGAGCAGTGCTTATCCAAAGAGTGGTAAGGTGGGCGGTAATGGTTGCAAACGGCAAGAAGTGGACTCGGGAATCTAATATAGTGAGATCTCACATTGGTTGGAGAGAACAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCATTTTAAAAACCTTGAGGGGAAGCTTGAAAGAGAAAGCCCAAAGCTGACAATATTTGCTAGCGATGAGCTTGAGCTATTATAAATGGTATCAGAGCTAGACATAGGGCGGTGTGCCAGCGAGGACACTAGGCCCCCAAAGGAGGTGGATTGTGAGATCCTACATTTGTTGGGGAGGAGAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGTGTCTTAAAAACCTTACGGGGAAGCCCAGAAGGGAAAGCTCAAAGCAGACAATATTTGCTAGCGGTGGGCTTGAGCTATTACAAATGGTATCAAAGCCGGGCAGTGTGCCAGTGAGAACGCTAGGCCTCCAAAGGGGGTAGATTGTGAGATCCCAAGTCGATTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAGGGGAACCCCAGAAGGGAAAACCCAAAGCAGACAATATTTGCTAGCGGCGGGCTTGAGCTATTACAAATGGTATCATGGACAGACATTGGGCAGTATGCCAGCGAGGACACTAGGCCCTCAAAAGGGGTGGATTGTGAGATCCCACATCGGTTAGAGAGGAGAACAAGACATTTCTTATAAGAGTGTGGAAACCTCTCCTTACCAAACGCTGAAAGGGAAAGTCCAAAGAGGACAATACCTGCTAGCGGTGCGCTTGAGTCGTTACAAAAATATATGAAGATGCCTAACGAAAAGATCTGTATGAACTCTGATATGAATTTATCAACTGTTGGATGCAGAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGTATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGAGAAAACATACTTGATGCTACAGTAACAGAGAACCTCCCAGGTACCACTTCCTCCACTTATGAATGTTATGTCAAATCTGTCATGAACGTTGAACAAAGCTCCCACTTAAAGCTGCTAATTTTCATCAGCTTCCTTAGCTAACAATCTCCACTGCCTCTTGCTCAACTTACATTGTAACACATTACAACTAGTAGGTGCCTTAAGTGCATTGGTATCTTGTTGTTGAACTTAAAATCGAGTGTCTTTGTGTATTAGCCCAAGTTCACCGCTAGTACATATTGTCCGTTTTGGCTCATTACGTATCGCCGTCAGCCTCACAGTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACGCCCTTATAAGGAATGTTTCGTTCCCCTCTCCAACTGATATGGGATCTCCCAATCCACCCTTCTTGGAGGCCCAACGTTCTCATTGATACACCGCCCGGTGTTTGGCTTTGACACCATTTGTTATAGTCAAAACCCACCGCTAGTAGATATTGTCCACTTTGCTCGTTACGTATCGCTATTAGCCTCACGGTTTTAAAATGCGTCTGCTGGGGAGAGGTTTCCGCACCCTTATAAGGAATGCTTCATTCCCCTCTTCAACCGATGTGGGATCTCACACCGTGTGTTTGATACGAGTCGCCCTTGCTTATAAGTTTCTCATTTTTTAAGGAAAAGTGTAAATAGCCCAAGCCCACCGCTAGGAGATATTGTCGTTTTTGGACTCTCTTTCGAGCTTCCTCTCAAGGTCTTAAAACGCGTCTGGTAAGGAGAGGTTTCCACATCCTTATAAGTAATAAACAGTGCTTTGTTCTCCTCTCCAACCGATGTGGGATCTCACAATCCACCCCCCTTGGGGGCCCAACATCCTCGCTGGCACACCGCCCGGTGTCTGGCTCTAATACTATTTGTAACAGCTCAAGTCCACCCCTAACAGATATTGTTTTCTTTGGGCTTTCCCTTCCGGGCTTCCTCTCAAGGTTATAAAACGCGTCTGGTATGGAGAGATTTTCACACTTTTATAAGCAATGCTTCATTCTCCTCTCCAACTGATATAGGATCTCACAATCCACTGAGCCCCCAAAGGGAATGGATTATGAGATCCCATATCGGTTGGAGAGGGGGACAAAACGTTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAAACTGTGAGACTGACGACGATACGTAGTGGGCCAAAGCGGACAATATCTACTAGCGGTAGGCTTGAACTGTTACAAAAAGAAAACCACAAATGAACCGTTGTTGTTTTGTATTGCTACCCCATATATGGAGTGATTTGTTCGAAGCATTTGTGCCCTTTTCTAACCCTATGTGAATTATGGTTGTAGTTGTTAGTTTATGACAAAGTGCAGATTGAGTAAGATTGTTTATTATGCAACTGCAGTCTTAGCTACTGATGAAAAATACAATGAAGCCATATATAGCAGCGCGAAGCGGTTAGTTGCTGCCATCGACGGTCTTCCAGATCCGGGCGGTCCTTCGTTTAAGGAAAATAAGCGCGAATCTAACTTCAAATCACGAGAAGAGACAGAGGAGAAACGAGGTCAGTTTTCTCTTGTAGTTGGAGGTTTGTTGGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTAAAACAATCCTCTGTTTCCTTCACATTCATATGTATAACCATGATGTTCTACAAATAGGATCGCTACAACATCACTTGCAACAAACCTGTTATAGAACAAGAGTTCAGCTTTTCCTTCTGCTTCTACCTTTTTTTTCATATAATTCGGGGTATTGGAGGTTCCACTCTTTGTATCATGTTCATTGCCGAATAAGGAAGTTCCTTGTCGGTTTTGCATG

mRNA sequence

TACCCCTTGGACACTGAAAAAAAGGAGGGGAAGAAATTGATCTTTGCTAAAGAAGAAAGAAAGTTGTGGGCAAGAGAGTAGTTGTCCCTACCAAAGAAAATCCCAAACCACTCAATTCCTCATGGAACCAACACACCTTCAACCCCATTTCCCCTCTGCAATCCATGTCTCACCATATCTGAATCTCTCCATCTTCCCATGGAAACCATTCTCTCTCCACACACTCTCTCTCCTCTCCTCAACCCCAAACCCTCCTCTCCCAAGAATCTCTTCCCTTATTCCTTCCAACCCAGAAGACATTTTNGTAAGCAGGGATAACACGCCTACCCCTTGGACACTGAAAAAAAGGAGGGGAAGAAATTGATCTTTGCTAAAGAAGAAAGAAAGTTGTGGGCAAGAGAGTAGTTGTCCCTACCAAAGAAAATCCCAAACCACTCAATTCCTCATGGAACCAACACACCTTCAACCCCATTTCCCCTCTGCAATCCATGTCTCACCATATCTGAATCTCTCCATCTTCCCATGGAAACCATTCTCTCTTCACACACACTCTCTCCTCTCCTCAACCCCAAACCCTCCTCTCCCAAGAATCTCTTCCCTTATTCCTTCCAACCCAGAAGACATTTTGTTTCTTTCTCTAACCCCATTTCGTTCTCTCTCAAAAACCACTCTCCCAAGTCTCTCCGATCATCTCTCCGATCATCTCTCCCAGTTCCCTCGAATTGGTTCTCCCATCTCCAACATGGGTTGGCGGCGCTAGCAATTTCTTTAGCGCTCAACTTTTCCCCATTGTTGGCCACCCACAATGCTCTGGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTAGTGGACGATGCTGGAGTTCTCAGTAGAGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTCGAGGAAGAATTTTCACATTGATTTTGTCACTGTTAGAAAGCTTACTAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGTATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGAGAAAACATACTTGATGCTACAGTAACAGAGAACCTCCCAGTCTTAGCTACTGATGAAAAATACAATGAAGCCATATATAGCAGCGCGAAGCGGTTAGTTGCTGCCATCGACGGTCTTCCAGATCCGGGCGGTCCTTCGTTTAAGGAAAATAAGCGCGAATCTAACTTCAAATCACGAGAAGAGACAGAGGAGAAACGAGGTCAGTTTTCTCTTGTAGTTGGAGGTTTGTTGGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTAAAACAATCCTCTGTTTCCTTCACATTCATATGTATAACCATGATGTTCTACAAATAGGATCGCTACAACATCACTTGCAACAAACCTGTTATAGAACAAGAGTTCAGCTTTTCCTTCTGCTTCTACCTTTTTTTTCATATAATTCGGGGTATTGGAGGTTCCACTCTTTGTATCATGTTCATTGCCGAATAAGGAAGTTCCTTGTCGGTTTTGCATG

Coding sequence (CDS)

ATGGAAACCATTCTCTCTTCACACACACTCTCTCCTCTCCTCAACCCCAAACCCTCCTCTCCCAAGAATCTCTTCCCTTATTCCTTCCAACCCAGAAGACATTTTGTTTCTTTCTCTAACCCCATTTCGTTCTCTCTCAAAAACCACTCTCCCAAGTCTCTCCGATCATCTCTCCGATCATCTCTCCCAGTTCCCTCGAATTGGTTCTCCCATCTCCAACATGGGTTGGCGGCGCTAGCAATTTCTTTAGCGCTCAACTTTTCCCCATTGTTGGCCACCCACAATGCTCTGGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAGTCGCATCTAGTGGACGATGCTGGAGTTCTCAGTAGAGTCACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTCGAGGAAGAATTTTCACATTGATTTTGTCACTGTTAGAAAGCTTACTAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGTATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGAGAAAACATACTTGATGCTACAGTAACAGAGAACCTCCCAGTCTTAGCTACTGATGAAAAATACAATGAAGCCATATATAGCAGCGCGAAGCGGTTAGTTGCTGCCATCGACGGTCTTCCAGATCCGGGCGGTCCTTCGTTTAAGGAAAATAAGCGCGAATCTAACTTCAAATCACGAGAAGAGACAGAGGAGAAACGAGGTCAGTTTTCTCTTGTAGTTGGAGGTTTGTTGGTGATAGCCTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCCAAGAAGTAA

Protein sequence

METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRSSLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK

Homology

[Close]

BLAST of Cp4.1LG11g09490 vs. Swiss-Prot
Match: U603_ARATH (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE=1 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.6e-110
Identity = 213/299 (71.24%), Postives = 248/299 (82.94%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           MET+LS   LSP LNPKP S      +  +P  H +S S P +FS     PK L  S R 
Sbjct: 1   METLLSPRALSPPLNPKPLSL-----HQTKPTSHSLSLSKPTTFS----GPKHL--STRF 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
           + P   NW    + GLAALA+SL L FSP+     ALASEF++LNDGPPKE+++VDDAGV
Sbjct: 61  TKPESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKG
Sbjct: 121 LSRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVL+TSQKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAI
Sbjct: 181 IVVLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DG PDPGGP+ K++KRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 DGQPDPGGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

[Close]

BLAST of Cp4.1LG11g09490 vs. Swiss-Prot
Match: U603_ORYSI (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_19898 PE=3 SV=2)

HSP 1 Score: 375.2 bits (962), Expect = 6.8e-103
Identity = 209/306 (68.30%), Postives = 246/306 (80.39%), Query Frame = 1


Query: 1   METILSSHTL-SPLLNPK--PSSPK-NLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRS 60
           MET+LS  TL SPL   K  P+SP  +    S  P R  VS +       +   P    +
Sbjct: 1   METLLSPSTLLSPLRGSKKKPASPAASASSSSSSPARSVVSCA-----LRRQQPPPQAVA 60

Query: 61  SLRSSLPVPS---NWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESH 120
           + R          +W + LQHGLAA A+SLA++ +P  A   A+ASEFDVLN GPP++++
Sbjct: 61  AWRGDGGRGGGVGSWATFLQHGLAAAALSLAISMAPAPAP--AVASEFDVLNGGPPEDTY 120

Query: 121 LVDDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTV 180
           +VDDAGVLSRVTKSD+KRL+ DLESRKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTV
Sbjct: 121 VVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTV 180

Query: 181 EDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSA 240
           E+GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++A
Sbjct: 181 EEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTA 240

Query: 241 KRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYY 300
           KRL AAIDGLPDPGGP+FK+NKRESNFK++EETEEKRGQF+LVVGGLLVIAFVVPMAQYY
Sbjct: 241 KRLAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYY 299

[Close]

BLAST of Cp4.1LG11g09490 vs. Swiss-Prot
Match: U603_ORYSJ (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0401100 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 6.8e-103
Identity = 209/306 (68.30%), Postives = 246/306 (80.39%), Query Frame = 1


Query: 1   METILSSHTL-SPLLNPK--PSSPK-NLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRS 60
           MET+LS  TL SPL   K  P+SP  +    S  P R  VS +       +   P    +
Sbjct: 1   METLLSPSTLLSPLRGSKKKPASPAASASSSSSSPARSVVSCA-----LRRQQPPPQAVA 60

Query: 61  SLRSSLPVPS---NWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESH 120
           + R          +W + LQHGLAA A+SLA++ +P  A   A+ASEFDVLN GPP++++
Sbjct: 61  AWRGDGGRGGGVGSWATFLQHGLAAAALSLAISMAPAPAP--AVASEFDVLNGGPPEDTY 120

Query: 121 LVDDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTV 180
           +VDDAGVLSRVTKSD+KRL+ DLESRKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTV
Sbjct: 121 VVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTV 180

Query: 181 EDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSA 240
           E+GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++A
Sbjct: 181 EEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTA 240

Query: 241 KRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYY 300
           KRL AAIDGLPDPGGP+FK+NKRESNFK++EETEEKRGQF+LVVGGLLVIAFVVPMAQYY
Sbjct: 241 KRLAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYY 299

[Close]

BLAST of Cp4.1LG11g09490 vs. TrEMBL
Match: A0A0A0LGA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020910 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 5.9e-138
Identity = 263/300 (87.67%), Postives = 275/300 (91.67%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPY-SFQPRRHFVSFSNPISFSLKNHSPKSLRSSLR 60
           METILS ++LSP+LNPKPSS KN   Y S QPR +  S S PIS SLK  SP     SLR
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPK---SLR 60

Query: 61  SSLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAG 120
           SSLP PS WFSHLQHGLAA+AISLALNFSPLLA HNALASEFDVL+DGPPKE+HLVDDAG
Sbjct: 61  SSLPFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAG 120

Query: 121 VLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNK 180
           VLSRVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNK
Sbjct: 121 VLSRVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNK 180

Query: 181 GIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAA 240
           GIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAA
Sbjct: 181 GIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAA 240

Query: 241 IDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           IDGLPD GGPSFK+NKRESNFK+REETEEKRGQF+LVVGGLLVIAF+VPMAQYYAY+SKK
Sbjct: 241 IDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQYYAYISKK 297

[Close]

BLAST of Cp4.1LG11g09490 vs. TrEMBL
Match: A0A0B0PCT8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_05899 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 6.8e-126
Identity = 240/299 (80.27%), Postives = 264/299 (88.29%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           METILSSH+L P+LNPK S  KNL   S QPR   +  S PI+ +LK    K    S++ 
Sbjct: 1   METILSSHSLHPILNPKASISKNLLLPSQQPRPASLFLSKPITCTLK----KPTSQSVKP 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
           SL  P NWF H Q GLAALAISLALNFSP+L T NA+ASEFDV+N+GPPKES++VDDA V
Sbjct: 61  SLAEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLL+DLESRKNFHI+F+TVRKLTSKADAFEYADQVLERWYPT+E+G+NKG
Sbjct: 121 LSRVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DGLPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DGLPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Cp4.1LG11g09490 vs. TrEMBL
Match: A0A061F263_THECC (Thylakoid lumen 18.3 kDa protein OS=Theobroma cacao GN=TCM_026607 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 3.7e-124
Identity = 236/299 (78.93%), Postives = 262/299 (87.63%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           METILSSH+LSP+LNPK S+ K+L   S QPR   +  S P + +LK  + +SL+ SL  
Sbjct: 1   METILSSHSLSPILNPKASTSKSLLSPSIQPRSASLPLSKPFTCALKKQTSQSLKPSLAE 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
               P  WF H Q GLAALAISLALNFSP+L T NA ASEFDV+N+GPPK+S++ DDA V
Sbjct: 61  ----PKTWFVHAQRGLAALAISLALNFSPVLHTGNAWASEFDVINEGPPKDSYVFDDANV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDL++LL+DLESRK FHI+FVTVRKLTSKADAFEYADQVLERWYPT+E+GNNKG
Sbjct: 121 LSRVTKSDLRQLLSDLESRKTFHINFVTVRKLTSKADAFEYADQVLERWYPTLEEGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGA+TGGPAFI+AVGE ILDATV+ENLPVLATDEKYNEAIYSSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAVTGGPAFIEAVGEKILDATVSENLPVLATDEKYNEAIYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DGLPDPGGP FKENK+ESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DGLPDPGGPKFKENKKESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Cp4.1LG11g09490 vs. TrEMBL
Match: A0A0D2SSZ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G294200 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 8.3e-124
Identity = 237/299 (79.26%), Postives = 261/299 (87.29%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           METILSSH+L P+LNPK S  KNL   S QPR   +  S PI+ +      K     ++ 
Sbjct: 1   METILSSHSLHPILNPKASISKNLLLPSQQPRPASLFLSKPITCTPN----KPTSQLVKP 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
           SL  P NWF H Q GLAALAISLALNFSP+L T NA+ASEFDV+N+GPPKES++VDDA V
Sbjct: 61  SLAEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLL+DLESRKNFHI+F+TVRKLTSKADAFEYADQVLERWYPT+E+G+NKG
Sbjct: 121 LSRVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DGLPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DGLPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Cp4.1LG11g09490 vs. TrEMBL
Match: M5WJ69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009374mg PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.9e-123
Identity = 231/299 (77.26%), Postives = 264/299 (88.29%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           METILSS +LSPL NPKPSSPK     S QP    +  + PI+ SLK  S  SL++SL  
Sbjct: 1   METILSSPSLSPLFNPKPSSPKTFLSPSLQPNSKSLLLTKPITSSLKKQSVPSLKTSL-- 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
             P+P +WFS+ Q GLAALA+SLALNF PLL + NALASEFDVLN+GPPK+S++VDDAGV
Sbjct: 61  --PIPKDWFSYAQQGLAALALSLALNFCPLLPSGNALASEFDVLNEGPPKDSYVVDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSD+KRL+++LE +KNFHI+F+TVRKLTSKADAFEYADQVLERWYP+VE+GNNKG
Sbjct: 121 LSRVTKSDIKRLMSELEYKKNFHINFITVRKLTSKADAFEYADQVLERWYPSVEEGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGAITGGPAF+QAVGE ILDATV+ENLPVLAT+EKYNEAI+SSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAITGGPAFVQAVGETILDATVSENLPVLATEEKYNEAIFSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DGLPDPGGP   +NKRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 241 DGLPDPGGPKLNDNKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 295

[Close]

BLAST of Cp4.1LG11g09490 vs. TAIR10
Match: AT1G54780.1 (AT1G54780.1 thylakoid lumen 18.3 kDa protein)

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-111
Identity = 213/299 (71.24%), Postives = 248/299 (82.94%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           MET+LS   LSP LNPKP S      +  +P  H +S S P +FS     PK L  S R 
Sbjct: 1   METLLSPRALSPPLNPKPLSL-----HQTKPTSHSLSLSKPTTFS----GPKHL--STRF 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
           + P   NW    + GLAALA+SL L FSP+     ALASEF++LNDGPPKE+++VDDAGV
Sbjct: 61  TKPESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKG
Sbjct: 121 LSRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVL+TSQKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAI
Sbjct: 181 IVVLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DG PDPGGP+ K++KRESNFK++EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 DGQPDPGGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

[Close]

BLAST of Cp4.1LG11g09490 vs. NCBI nr
Match: gi|659070442|ref|XP_008455096.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo])

HSP 1 Score: 518.8 bits (1335), Expect = 6.1e-144
Identity = 272/299 (90.97%), Postives = 280/299 (93.65%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           METILS H+LSPLLNPKPSS KNL  YS QPR + VS S PIS SLK  SP     SLRS
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPK---SLRS 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
           SLPVPS WFSHLQHGLAA+AISLALNFSPLLA HNALASEFDVLNDGPPKE+H+VDDAGV
Sbjct: 61  SLPVPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG
Sbjct: 121 LSRVTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DGLPDPGGPSFK+NKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DGLPDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]

BLAST of Cp4.1LG11g09490 vs. NCBI nr
Match: gi|449442857|ref|XP_004139197.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis sativus])

HSP 1 Score: 498.4 bits (1282), Expect = 8.5e-138
Identity = 263/300 (87.67%), Postives = 275/300 (91.67%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPY-SFQPRRHFVSFSNPISFSLKNHSPKSLRSSLR 60
           METILS ++LSP+LNPKPSS KN   Y S QPR +  S S PIS SLK  SP     SLR
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPK---SLR 60

Query: 61  SSLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAG 120
           SSLP PS WFSHLQHGLAA+AISLALNFSPLLA HNALASEFDVL+DGPPKE+HLVDDAG
Sbjct: 61  SSLPFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAG 120

Query: 121 VLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNK 180
           VLSRVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNK
Sbjct: 121 VLSRVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNK 180

Query: 181 GIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAA 240
           GIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAA
Sbjct: 181 GIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAA 240

Query: 241 IDGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           IDGLPD GGPSFK+NKRESNFK+REETEEKRGQF+LVVGGLLVIAF+VPMAQYYAY+SKK
Sbjct: 241 IDGLPDTGGPSFKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFIVPMAQYYAYISKK 297

[Close]

BLAST of Cp4.1LG11g09490 vs. NCBI nr
Match: gi|728841778|gb|KHG21221.1| (hypothetical protein F383_05899 [Gossypium arboreum])

HSP 1 Score: 458.4 bits (1178), Expect = 9.8e-126
Identity = 240/299 (80.27%), Postives = 264/299 (88.29%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           METILSSH+L P+LNPK S  KNL   S QPR   +  S PI+ +LK    K    S++ 
Sbjct: 1   METILSSHSLHPILNPKASISKNLLLPSQQPRPASLFLSKPITCTLK----KPTSQSVKP 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
           SL  P NWF H Q GLAALAISLALNFSP+L T NA+ASEFDV+N+GPPKES++VDDA V
Sbjct: 61  SLAEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLL+DLESRKNFHI+F+TVRKLTSKADAFEYADQVLERWYPT+E+G+NKG
Sbjct: 121 LSRVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DGLPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DGLPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Cp4.1LG11g09490 vs. NCBI nr
Match: gi|590643887|ref|XP_007030928.1| (Thylakoid lumen 18.3 kDa protein [Theobroma cacao])

HSP 1 Score: 452.6 bits (1163), Expect = 5.4e-124
Identity = 236/299 (78.93%), Postives = 262/299 (87.63%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           METILSSH+LSP+LNPK S+ K+L   S QPR   +  S P + +LK  + +SL+ SL  
Sbjct: 1   METILSSHSLSPILNPKASTSKSLLSPSIQPRSASLPLSKPFTCALKKQTSQSLKPSLAE 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
               P  WF H Q GLAALAISLALNFSP+L T NA ASEFDV+N+GPPK+S++ DDA V
Sbjct: 61  ----PKTWFVHAQRGLAALAISLALNFSPVLHTGNAWASEFDVINEGPPKDSYVFDDANV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDL++LL+DLESRK FHI+FVTVRKLTSKADAFEYADQVLERWYPT+E+GNNKG
Sbjct: 121 LSRVTKSDLRQLLSDLESRKTFHINFVTVRKLTSKADAFEYADQVLERWYPTLEEGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGA+TGGPAFI+AVGE ILDATV+ENLPVLATDEKYNEAIYSSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAVTGGPAFIEAVGEKILDATVSENLPVLATDEKYNEAIYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DGLPDPGGP FKENK+ESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DGLPDPGGPKFKENKKESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Cp4.1LG11g09490 vs. NCBI nr
Match: gi|823196841|ref|XP_012493059.1| (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Gossypium raimondii])

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-123
Identity = 237/299 (79.26%), Postives = 261/299 (87.29%), Query Frame = 1


Query: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60
           METILSSH+L P+LNPK S  KNL   S QPR   +  S PI+ +      K     ++ 
Sbjct: 1   METILSSHSLHPILNPKASISKNLLLPSQQPRPASLFLSKPITCTPN----KPTSQLVKP 60

Query: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120
           SL  P NWF H Q GLAALAISLALNFSP+L T NA+ASEFDV+N+GPPKES++VDDA V
Sbjct: 61  SLAEPRNWFVHAQQGLAALAISLALNFSPVLYTGNAIASEFDVINEGPPKESYVVDDANV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLL+DLESRKNFHI+F+TVRKLTSKADAFEYADQVLERWYPT+E+G+NKG
Sbjct: 121 LSRVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGA+TGGPAF+QAVGENILDATVTENLPVLAT+EKYNEA+YSSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 300
           DGLPDPGGP  K+NKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DGLPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g09490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
U603_ARATH	2.6e-110	71.24	UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE...	[more]
U603_ORYSI	6.8e-103	68.30	UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_1...	[more]
U603_ORYSJ	6.8e-103	68.30	UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=O...	[more]

BLAST of Cp4.1LG11g09490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGA5_CUCSA	5.9e-138	87.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020910 PE=4 SV=1	[more]
A0A0B0PCT8_GOSAR	6.8e-126	80.27	Uncharacterized protein OS=Gossypium arboreum GN=F383_05899 PE=4 SV=1	[more]
A0A061F263_THECC	3.7e-124	78.93	Thylakoid lumen 18.3 kDa protein OS=Theobroma cacao GN=TCM_026607 PE=4 SV=1	[more]
A0A0D2SSZ2_GOSRA	8.3e-124	79.26	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G294200 PE=4 SV=1	[more]
M5WJ69_PRUPE	1.9e-123	77.26	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009374mg PE=4 SV=1	[more]

BLAST of Cp4.1LG11g09490 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54780.1	1.5e-111	71.24	thylakoid lumen 18.3 kDa protein	[more]

BLAST of Cp4.1LG11g09490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070442\|ref\|XP_008455096.1\|	6.1e-144	90.97	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo]	[more]
gi\|449442857\|ref\|XP_004139197.1\|	8.5e-138	87.67	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis sativus]	[more]
gi\|728841778\|gb\|KHG21221.1\|	9.8e-126	80.27	hypothetical protein F383_05899 [Gossypium arboreum]	[more]
gi\|590643887\|ref\|XP_007030928.1\|	5.4e-124	78.93	Thylakoid lumen 18.3 kDa protein [Theobroma cacao]	[more]
gi\|823196841\|ref\|XP_012493059.1\|	1.2e-123	79.26	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007621	TPM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009637	response to blue light
biological_process	GO:0008150	biological_process
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0010114	response to red light
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0010218	response to far red light
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0019344	cysteine biosynthetic process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g09490.1	Cp4.1LG11g09490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007621	TPM domain	PFAM	PF04536	TPM_phosphatase	coord: 115..237 score: 2.5
None	No IPR available	PANTHER	PTHR30373	UNCHARACTERIZED	coord: 59..299 score: 7.7
None	No IPR available	PANTHER	PTHR30373:SF2	UPF0603 PROTEIN YGCG	coord: 59..299 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g09490	Cucsa.091810	Cucumber (Gy14) v1	cgycpeB0168
Cp4.1LG11g09490	CmaCh12G010900	Cucurbita maxima (Rimu)	cmacpeB171
Cp4.1LG11g09490	CmaCh05G011610	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g09490	CmoCh12G011070	Cucurbita moschata (Rifu)	cmocpeB147
Cp4.1LG11g09490	CmoCh05G011720	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g09490	Cla019859	Watermelon (97103) v1	cpewmB113
Cp4.1LG11g09490	Csa2G020910	Cucumber (Chinese Long) v2	cpecuB103
Cp4.1LG11g09490	MELO3C004307	Melon (DHL92) v3.5.1	cpemeB099
Cp4.1LG11g09490	ClCG02G016070	Watermelon (Charleston Gray)	cpewcgB104
Cp4.1LG11g09490	CSPI02G03580	Wild cucumber (PI 183967)	cpecpiB100
Cp4.1LG11g09490	Lsi11G005080	Bottle gourd (USVL1VR-Ls)	cpelsiB074
Cp4.1LG11g09490	MELO3C004307.2	Melon (DHL92) v3.6.1	cpemedB123
Cp4.1LG11g09490	Carg17563	Silver-seed gourd	carcpeB1005
Cp4.1LG11g09490	Carg12882	Silver-seed gourd	carcpeB1252

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG11g09490	Cp4.1LG07g09290	Cucurbita pepo (Zucchini)	cpecpeB139

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g09490	Cucurbita pepo (Zucchini)	cpecpeB001
Cp4.1LG11g09490	Cucurbita moschata (Rifu)	cmocpeB051
Cp4.1LG11g09490	Cucumber (Gy14) v2	cgybcpeB168
Cp4.1LG11g09490	Cucumber (Chinese Long) v3	cpecucB0114