CmoCh04G020320 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G020320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Calcium-binding EF-hand family protein, putative
Location	Cmo_Chr04 : 11002770 .. 11003201 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGTATGAAGCAAGTGAGTTGATCAAGAAGTATCCAAGAAATGGTGATGGTGTTCAACTAAAATCTTTCGGTGGCATTACTCGAGATTCAACTCAACTCAACAATCAAGGCAAGATACCAGAAATCTTAAAAGATAACAAGAATGTTGGGCTCAAGCTTAGTTCAAATACTCACCCAAAGACACCTAAGTTGCAATTTACTCGAGAGCAGATGAAGGAGATCTTTAGATATCATGATAGCGACAAGGATGGTTTTCTCAATTTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTACGGCATGTCATATGCTGATGCAAATAAAGATGGCCTTATCAGCGAGACTGAACTTGACAAACTCATTGATTATGCCCAGAAATTTGTGAAGAAGAAATGA

mRNA sequence

ATGGCTAAGTATGAAGCAAGTGAGTTGATCAAGAAGTATCCAAGAAATGGTGATGGTGTTCAACTAAAATCTTTCGGTGGCATTACTCGAGATTCAACTCAACTCAACAATCAAGGCAAGATACCAGAAATCTTAAAAGATAACAAGAATGTTGGGCTCAAGCTTAGTTCAAATACTCACCCAAAGACACCTAAGTTGCAATTTACTCGAGAGCAGATGAAGGAGATCTTTAGATATCATGATAGCGACAAGGATGGTTTTCTCAATTTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTACGGCATGTCATATGCTGATGCAAATAAAGATGGCCTTATCAGCGAGACTGAACTTGACAAACTCATTGATTATGCCCAGAAATTTGTGAAGAAGAAATGA

Coding sequence (CDS)

ATGGCTAAGTATGAAGCAAGTGAGTTGATCAAGAAGTATCCAAGAAATGGTGATGGTGTTCAACTAAAATCTTTCGGTGGCATTACTCGAGATTCAACTCAACTCAACAATCAAGGCAAGATACCAGAAATCTTAAAAGATAACAAGAATGTTGGGCTCAAGCTTAGTTCAAATACTCACCCAAAGACACCTAAGTTGCAATTTACTCGAGAGCAGATGAAGGAGATCTTTAGATATCATGATAGCGACAAGGATGGTTTTCTCAATTTAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTACGGCATGTCATATGCTGATGCAAATAAAGATGGCCTTATCAGCGAGACTGAACTTGACAAACTCATTGATTATGCCCAGAAATTTGTGAAGAAGAAATGA

Homology

[Close]

BLAST of CmoCh04G020320 vs. TrEMBL
Match: A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-37
Identity = 90/163 (55.21%), Postives = 110/163 (67.48%), Query Frame = 1


Query: 2   AKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLN-NQGKIPEILKDNKNVGLKLSSNTH 61
           AKYEAS+L+KKY +NG+GV L +F    R STQ+N N+    + LK N +V  KLSSN  
Sbjct: 38  AKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQ 97

Query: 62  --------------------PKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL 121
                                K   +QF+REQ+KEIF+Y+DSD+DGFLN+RE+TKAFA L
Sbjct: 98  LKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALL 157

Query: 122 GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK 144
           GSI PF KA +GM YAD NKDGLI E ELDKLI+YA KF+KKK
Sbjct: 158 GSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]

BLAST of CmoCh04G020320 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-36
Identity = 86/163 (52.76%), Postives = 108/163 (66.26%), Query Frame = 1


Query: 1   MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTH 60
           MA YEAS LIK+Y +NGD V++K+F  + R STQ+ N+  + +ILK +  V  KL S  H
Sbjct: 10  MAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESVLKILKPSDGVAHKLRSEAH 69

Query: 61  --------------------PKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL 120
                                K+  +  +RE++KEIF+YHD++ DGFLN  ELTKAFAFL
Sbjct: 70  IQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFL 129

Query: 121 GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK 144
           GS+ PF KA YGM YADAN+DGLISE ELDKLIDYA K +KKK
Sbjct: 130 GSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]

BLAST of CmoCh04G020320 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.1e-36
Identity = 91/163 (55.83%), Postives = 113/163 (69.33%), Query Frame = 1


Query: 2   AKYEASELIKKYPRNGDGV----QLKSFGGITRDSTQLNNQGKIPE--ILKDNKNVGLKL 61
           AK EA+ELIKKY RNGDGV    +L+SF    R STQLNN   +    + K N+N+  K+
Sbjct: 10  AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKV 69

Query: 62  SSNTHPKTPKLQF---------------TREQMKEIFRYHDSDKDGFLNLRELTKAFAFL 121
           SSNT   TPK Q                +REQ+KEIF+YHDS+KDGFL++RELTKAF+ +
Sbjct: 70  SSNTCI-TPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM 129

Query: 122 GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK 144
           GSI+PF KA Y M+YAD ++DGL+SE ELDKLIDYA K +KKK
Sbjct: 130 GSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]

BLAST of CmoCh04G020320 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-34
Identity = 87/166 (52.41%), Postives = 109/166 (65.66%), Query Frame = 1


Query: 2   AKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNN-QGKIPEIL--KDNKNVGLKLSSN 61
           AKYEAS+L+KK+  N +GV LK+F GI   ST++NN Q    EI+    N  V   L+SN
Sbjct: 11  AKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSNHPVAHYLTSN 70

Query: 62  THP---------------------KTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAF 121
            +                      K   +QF+REQ+KEIF+YHDSD DGFLNLRE+TKAF
Sbjct: 71  AYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGFLNLREVTKAF 130

Query: 122 AFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK 144
           AFLG+I+P  KA +GM YADANKDGLIS+ EL+KL+DYA KF  K+
Sbjct: 131 AFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]

BLAST of CmoCh04G020320 vs. TrEMBL
Match: A0A0A0LKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.3e-21
Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 1


Query: 61  PKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASYGMSYADANK 120
           P   K  F+RE+MKEIFR HD D DG+L++ EL KA  FLG  IPF KA YGM+Y D N 
Sbjct: 4   PGVSKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENG 63

Query: 121 DGLISETELDKLIDYAQKFVKKK 144
           DGLISE ELDKLIDYA++F K++
Sbjct: 64  DGLISEDELDKLIDYAERFQKRR 86

[Close]

BLAST of CmoCh04G020320 vs. TAIR10
Match: AT3G03000.1 (AT3G03000.1 EF hand calcium-binding protein family)

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 38/139 (27.34%), Postives = 63/139 (45.32%), Query Frame = 1


Query: 5   EASELIKKYPRNGDGVQLK-SFGGITRDSTQLNNQGKIPEILK--DNKNVGLKLSSN--- 64
           E  E+ + + +N DG   +   G + R      +Q ++  +++  D  N GL   S    
Sbjct: 20  ELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNGLVEFSEFVA 79

Query: 65  -THPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASYGMSYAD 124
              P   K  +T +Q+K IFR  D D +G++   EL  + A LG  +  E+ +  +  AD
Sbjct: 80  LVEPDLVKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKEAD 139

Query: 125 ANKDGLISETELDKLIDYA 137
            + DG I   E  + I  A
Sbjct: 140 RDGDGCIDFQEFVQAITSA 158

[Close]

BLAST of CmoCh04G020320 vs. TAIR10
Match: AT2G27030.3 (AT2G27030.3 calmodulin 5)

HSP 1 Score: 48.5 bits (114), Expect = 3.9e-06
Identity = 33/135 (24.44%), Postives = 61/135 (45.19%), Query Frame = 1


Query: 5   EASELIKKYPRNGDG-VQLKSFGGITRDSTQLNNQGKIPEILKD-----NKNVGLKLSSN 64
           E  E    + ++GDG +  K  G + R   Q   + ++ +++ +     N  +      N
Sbjct: 12  EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71

Query: 65  THPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASYGMSYADA 124
              +  K   + E++KE FR  D D++GF++  EL      LG  +  E+    +  AD 
Sbjct: 72  LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADV 131

Query: 125 NKDGLISETELDKLI 134
           + DG I+  E  K++
Sbjct: 132 DGDGQINYEEFVKVM 146

[Close]

BLAST of CmoCh04G020320 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3)

HSP 1 Score: 48.5 bits (114), Expect = 3.9e-06
Identity = 33/135 (24.44%), Postives = 61/135 (45.19%), Query Frame = 1


Query: 5   EASELIKKYPRNGDG-VQLKSFGGITRDSTQLNNQGKIPEILKD-----NKNVGLKLSSN 64
           E  E    + ++GDG +  K  G + R   Q   + ++ +++ +     N  +      N
Sbjct: 12  EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71

Query: 65  THPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASYGMSYADA 124
              +  K   + E++KE FR  D D++GF++  EL      LG  +  E+    +  AD 
Sbjct: 72  LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADV 131

Query: 125 NKDGLISETELDKLI 134
           + DG I+  E  K++
Sbjct: 132 DGDGQINYEEFVKVM 146

[Close]

BLAST of CmoCh04G020320 vs. TAIR10
Match: AT5G21274.1 (AT5G21274.1 calmodulin 6)

HSP 1 Score: 48.1 bits (113), Expect = 5.1e-06
Identity = 33/135 (24.44%), Postives = 61/135 (45.19%), Query Frame = 1


Query: 5   EASELIKKYPRNGDG-VQLKSFGGITRDSTQLNNQGKIPEILKD-----NKNVGLKLSSN 64
           E  E    + ++GDG +  K  G + R   Q   + ++ +++ +     N  +      N
Sbjct: 12  EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71

Query: 65  THPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASYGMSYADA 124
              +  K   + E++KE FR  D D++GF++  EL      LG  +  E+    +  AD 
Sbjct: 72  LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEMIREADV 131

Query: 125 NKDGLISETELDKLI 134
           + DG I+  E  K++
Sbjct: 132 DGDGQINYEEFVKVM 146

[Close]

BLAST of CmoCh04G020320 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7)

HSP 1 Score: 48.1 bits (113), Expect = 5.1e-06
Identity = 33/135 (24.44%), Postives = 61/135 (45.19%), Query Frame = 1


Query: 5   EASELIKKYPRNGDG-VQLKSFGGITRDSTQLNNQGKIPEILKD-----NKNVGLKLSSN 64
           E  E    + ++GDG +  K  G + R   Q   + ++ +++ +     N  +      N
Sbjct: 12  EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 71

Query: 65  THPKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGSIIPFEKASYGMSYADA 124
              +  K   + E++KE FR  D D++GF++  EL      LG  +  E+    +  AD 
Sbjct: 72  LMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 131

Query: 125 NKDGLISETELDKLI 134
           + DG I+  E  K++
Sbjct: 132 DGDGQINYEEFVKVM 146

[Close]

BLAST of CmoCh04G020320 vs. NCBI nr
Match: gi|700194512|gb|KGN49689.1| (hypothetical protein Csa_5G067670 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 2.4e-37
Identity = 90/163 (55.21%), Postives = 110/163 (67.48%), Query Frame = 1


Query: 2   AKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLN-NQGKIPEILKDNKNVGLKLSSNTH 61
           AKYEAS+L+KKY +NG+GV L +F    R STQ+N N+    + LK N +V  KLSSN  
Sbjct: 38  AKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQ 97

Query: 62  --------------------PKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL 121
                                K   +QF+REQ+KEIF+Y+DSD+DGFLN+RE+TKAFA L
Sbjct: 98  LKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALL 157

Query: 122 GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK 144
           GSI PF KA +GM YAD NKDGLI E ELDKLI+YA KF+KKK
Sbjct: 158 GSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 200

[Close]

BLAST of CmoCh04G020320 vs. NCBI nr
Match: gi|700194510|gb|KGN49687.1| (hypothetical protein Csa_5G067410 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 5.9e-36
Identity = 86/163 (52.76%), Postives = 108/163 (66.26%), Query Frame = 1


Query: 1   MAKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNNQGKIPEILKDNKNVGLKLSSNTH 60
           MA YEAS LIK+Y +NGD V++K+F  + R STQ+ N+  + +ILK +  V  KL S  H
Sbjct: 10  MAMYEASMLIKQYEKNGDAVKVKAFDDV-RSSTQIGNRESVLKILKPSDGVAHKLRSEAH 69

Query: 61  --------------------PKTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFL 120
                                K+  +  +RE++KEIF+YHD++ DGFLN  ELTKAFAFL
Sbjct: 70  IQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNRMELTKAFAFL 129

Query: 121 GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK 144
           GS+ PF KA YGM YADAN+DGLISE ELDKLIDYA K +KKK
Sbjct: 130 GSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]

BLAST of CmoCh04G020320 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-35
Identity = 91/163 (55.83%), Postives = 113/163 (69.33%), Query Frame = 1


Query: 2   AKYEASELIKKYPRNGDGV----QLKSFGGITRDSTQLNNQGKIPE--ILKDNKNVGLKL 61
           AK EA+ELIKKY RNGDGV    +L+SF    R STQLNN   +    + K N+N+  K+
Sbjct: 10  AKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVPKTNENLAQKV 69

Query: 62  SSNTHPKTPKLQF---------------TREQMKEIFRYHDSDKDGFLNLRELTKAFAFL 121
           SSNT   TPK Q                +REQ+KEIF+YHDS+KDGFL++RELTKAF+ +
Sbjct: 70  SSNTCI-TPKKQLLDKAQGSSKQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFSSM 129

Query: 122 GSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK 144
           GSI+PF KA Y M+YAD ++DGL+SE ELDKLIDYA K +KKK
Sbjct: 130 GSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]

BLAST of CmoCh04G020320 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 1.9e-34
Identity = 87/166 (52.41%), Postives = 109/166 (65.66%), Query Frame = 1


Query: 2   AKYEASELIKKYPRNGDGVQLKSFGGITRDSTQLNN-QGKIPEIL--KDNKNVGLKLSSN 61
           AKYEAS+L+KK+  N +GV LK+F GI   ST++NN Q    EI+    N  V   L+SN
Sbjct: 11  AKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSNHPVAHYLTSN 70

Query: 62  THP---------------------KTPKLQFTREQMKEIFRYHDSDKDGFLNLRELTKAF 121
            +                      K   +QF+REQ+KEIF+YHDSD DGFLNLRE+TKAF
Sbjct: 71  AYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGFLNLREVTKAF 130

Query: 122 AFLGSIIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK 144
           AFLG+I+P  KA +GM YADANKDGLIS+ EL+KL+DYA KF  K+
Sbjct: 131 AFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]

BLAST of CmoCh04G020320 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo])

HSP 1 Score: 146.0 bits (367), Expect = 5.1e-32
Identity = 86/161 (53.42%), Postives = 108/161 (67.08%), Query Frame = 1


Query: 2   AKYEASELIKKYPRNGDGV----QLKSFGGITR-DSTQLNNQGKIPEILKDNKNVGLKLS 61
           AK EASELIKKY RNGDGV    +L+SF    R  + +  +   IP   K N+N+  K+S
Sbjct: 10  AKIEASELIKKYDRNGDGVLTKEELQSFLHDARLKNIRFVSSSTIP---KTNENLDQKVS 69

Query: 62  SNTHPKTPK--------------LQFTREQMKEIFRYHDSDKDGFLNLRELTKAFAFLGS 121
           SNT  K  K              +  +REQ+KEIF+YHDS+KDGFL++RELTKAF  LGS
Sbjct: 70  SNTRIKPKKQLLDKAQDSLRQSNVPLSREQIKEIFKYHDSNKDGFLSIRELTKAFGSLGS 129

Query: 122 IIPFEKASYGMSYADANKDGLISETELDKLIDYAQKFVKKK 144
           I+PF KA + M+YAD ++DGLISE EL KLIDYA+K +KKK
Sbjct: 130 IVPFAKARHAMAYADVDEDGLISEAELHKLIDYAEKIIKKK 167

The following BLAST results are available for this feature:

BLAST of CmoCh04G020320 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G020320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLF3_CUCSA	1.7e-37	55.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1	[more]
A0A0A0KMQ1_CUCSA	4.1e-36	52.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1	[more]
A0A0A0LRC8_CUCSA	9.1e-36	55.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1	[more]
A0A0A0KIY4_CUCSA	1.3e-34	52.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1	[more]
A0A0A0LKX1_CUCSA	6.3e-21	62.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1	[more]

BLAST of CmoCh04G020320 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03000.1	3.0e-06	27.34	EF hand calcium-binding protein family	[more]
AT2G27030.3	3.9e-06	24.44	calmodulin 5	[more]
AT3G56800.1	3.9e-06	24.44	calmodulin 3	[more]
AT5G21274.1	5.1e-06	24.44	calmodulin 6	[more]
AT3G43810.1	5.1e-06	24.44	calmodulin 7	[more]

BLAST of CmoCh04G020320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700194512\|gb\|KGN49689.1\|	2.4e-37	55.21	hypothetical protein Csa_5G067670 [Cucumis sativus]	[more]
gi\|700194510\|gb\|KGN49687.1\|	5.9e-36	52.76	hypothetical protein Csa_5G067410 [Cucumis sativus]	[more]
gi\|449470190\|ref\|XP_004152801.1\|	1.3e-35	55.83	PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus]	[more]
gi\|700194513\|gb\|KGN49690.1\|	1.9e-34	52.41	hypothetical protein Csa_5G068170 [Cucumis sativus]	[more]
gi\|659089539\|ref\|XP_008445564.1\|	5.1e-32	53.42	PREDICTED: probable calcium-binding protein CML11 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G020320.1	CmoCh04G020320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 71..131 score: 2.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 104..139 score: 6.758coord: 68..103 score: 12
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 60..134 score: 7.6
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 66..131 score: 2.99
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 117..129 score: -coord: 81..93 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 64..136 score: 2.5
None	No IPR available	PANTHER	PTHR10891:SF592	CALCIUM-BINDING PROTEIN CML38-RELATED	coord: 64..136 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G020320	CmaCh04G019140	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G020320	Cla001912	Watermelon (97103) v1	cmowmB733
CmoCh04G020320	Csa5G068170	Cucumber (Chinese Long) v2	cmocuB745
CmoCh04G020320	ClCG11G000380	Watermelon (Charleston Gray)	cmowcgB623
CmoCh04G020320	CSPI05G01520	Wild cucumber (PI 183967)	cmocpiB754
CmoCh04G020320	Lsi11G000760	Bottle gourd (USVL1VR-Ls)	cmolsiB623
CmoCh04G020320	Cp4.1LG01g16920	Cucurbita pepo (Zucchini)	cmocpeB686
CmoCh04G020320	MELO3C026462.2	Melon (DHL92) v3.6.1	cmomedB723
CmoCh04G020320	CsaV3_5G015470	Cucumber (Chinese Long) v3	cmocucB0895
CmoCh04G020320	Cla97C11G206700	Watermelon (97103) v2	cmowmbB699
CmoCh04G020320	Bhi07G000043	Wax gourd	cmowgoB0914
CmoCh04G020320	CsGy5G011640	Cucumber (Gy14) v2	cgybcmoB665

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G020320	Cucumber (Gy14) v1	cgycmoB0765
CmoCh04G020320	Wild cucumber (PI 183967)	cmocpiB741
CmoCh04G020320	Melon (DHL92) v3.5.1	cmomeB656
CmoCh04G020320	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G020320	Cucurbita pepo (Zucchini)	cmocpeB682
CmoCh04G020320	Cucumber (Gy14) v2	cgybcmoB645
CmoCh04G020320	Melon (DHL92) v3.6.1	cmomedB746
CmoCh04G020320	Watermelon (97103) v2	cmowmbB712
CmoCh04G020320	Wax gourd	cmowgoB0906