CsGy5G011640 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G011640
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	probable calcium-binding protein CML11
Location	Chr5 : 12857154 .. 12857756 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTGAAGTTTGTGCCATCTTCTAAATCTTCATATAGAAACAAATACATGGATGCCATAACCAAACCAAACCAAACCATGCATATCCCCCAACTTCAAATGTCCAAGGCCAAGTATGAAGCAAGTAAGTTGATGAAGAAGTATGAACAAAATGGTAAAGGTGTTATACTAAGTGCTTTCAACGATAATGCTCGAGGTTCGACTCAAATCAACACTAATCGAGAAATGGCGACAAAAAAGCTAAAACCTAACGATGATGTTGCGCACAAACTTAGTTCAAATGCTCAATTAAAATCAAATAATCAAATACGAGGAAAAGCTCAAGTACCCATCAAAAGAGTTTATGATACAAAGGCATCTAACATGCAATTTAGTCGAGAGCAGATAAAGGAAATTTTTCAATACTATGATAGCGACCATGACGGTTTTCTCAACATAAGAGAGGTGACAAAAGCTTTTGCTCTTCTAGGATCAATTTTTCCATTCAACAAAGCCTACCATGGCATGGTATATGCTGATACTAATAAAGATGGACTCATTGGTGAAGATGAACTGGACAAACTCATAAATTATGCAAATAAATTTATGAAGAAAAAATGA

mRNA sequence

ATGGTGTTGAAGTTTGTGCCATCTTCTAAATCTTCATATAGAAACAAATACATGGATGCCATAACCAAACCAAACCAAACCATGCATATCCCCCAACTTCAAATGTCCAAGGCCAAGTATGAAGCAAGTAAGTTGATGAAGAAGTATGAACAAAATGGTAAAGGTGTTATACTAAGTGCTTTCAACGATAATGCTCGAGGTTCGACTCAAATCAACACTAATCGAGAAATGGCGACAAAAAAGCTAAAACCTAACGATGATGTTGCGCACAAACTTAGTTCAAATGCTCAATTAAAATCAAATAATCAAATACGAGGAAAAGCTCAAGTACCCATCAAAAGAGTTTATGATACAAAGGCATCTAACATGCAATTTAGTCGAGAGCAGATAAAGGAAATTTTTCAATACTATGATAGCGACCATGACGGTTTTCTCAACATAAGAGAGGTGACAAAAGCTTTTGCTCTTCTAGGATCAATTTTTCCATTCAACAAAGCCTACCATGGCATGGTATATGCTGATACTAATAAAGATGGACTCATTGGTGAAGATGAACTGGACAAACTCATAAATTATGCAAATAAATTTATGAAGAAAAAATGA

Coding sequence (CDS)

ATGGTGTTGAAGTTTGTGCCATCTTCTAAATCTTCATATAGAAACAAATACATGGATGCCATAACCAAACCAAACCAAACCATGCATATCCCCCAACTTCAAATGTCCAAGGCCAAGTATGAAGCAAGTAAGTTGATGAAGAAGTATGAACAAAATGGTAAAGGTGTTATACTAAGTGCTTTCAACGATAATGCTCGAGGTTCGACTCAAATCAACACTAATCGAGAAATGGCGACAAAAAAGCTAAAACCTAACGATGATGTTGCGCACAAACTTAGTTCAAATGCTCAATTAAAATCAAATAATCAAATACGAGGAAAAGCTCAAGTACCCATCAAAAGAGTTTATGATACAAAGGCATCTAACATGCAATTTAGTCGAGAGCAGATAAAGGAAATTTTTCAATACTATGATAGCGACCATGACGGTTTTCTCAACATAAGAGAGGTGACAAAAGCTTTTGCTCTTCTAGGATCAATTTTTCCATTCAACAAAGCCTACCATGGCATGGTATATGCTGATACTAATAAAGATGGACTCATTGGTGAAGATGAACTGGACAAACTCATAAATTATGCAAATAAATTTATGAAGAAAAAATGA

Protein sequence

MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGKGVILSAFNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDHDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK

Homology

[Close]

BLAST of CsGy5G011640 vs. NCBI nr
Match: KGN49689.1 (hypothetical protein Csa_5G067670 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 4.2e-105
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGKGVILSA 60
           MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNG+GVILSA
Sbjct: 1   MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGEGVILSA 60

Query: 61  FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA 120
           FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA
Sbjct: 61  FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA 120

Query: 121 SNMQFSREQIKEIFQYYDSDHDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL 180
           SNMQFSREQIKEIFQYYDSD DGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL
Sbjct: 121 SNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL 180

Query: 181 IGEDELDKLINYANKFMKKK 201
           IGEDELDKLINYANKFMKKK
Sbjct: 181 IGEDELDKLINYANKFMKKK 200

[Close]

BLAST of CsGy5G011640 vs. NCBI nr
Match: KGN49690.1 (hypothetical protein Csa_5G068170 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 6.7e-50
Identity = 115/176 (65.34%), Postives = 135/176 (76.70%), Query Frame = 0


Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGKGVILSAFNDNARGSTQINTNREMATK-KLKP-N 87
           M+I  LQ+SKAKYEASKLMKK+E N +GV L AFN     ST+IN  + MAT+  LKP N
Sbjct: 1   MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60

Query: 88  DDVAHKLSSNAQLKSNNQI-RGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDHDGF 147
             VAH L+SNA +  + Q+  GKAQV    V D KASNMQFSREQIKEIFQY+DSD+DGF
Sbjct: 61  HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120

Query: 148 LNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           LN+REVTKAFA LG+I P  KAYHGMVYAD NKDGLI +DEL+KL++YA KF  K+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]

BLAST of CsGy5G011640 vs. NCBI nr
Match: KGN49687.1 (hypothetical protein Csa_5G067410 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 6.5e-45
Identity = 104/173 (60.12%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGKGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87
           M+I +LQ S A YEAS L+K+YE+NG  V + AF D+ R STQI  NRE   K LKP+D 
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAF-DDVRSSTQIG-NRESVLKILKPSDG 60

Query: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDHDGFLNI 147
           VAHKL S A ++   +  GK +  I RV D K+SNM  SRE+IKEIFQY+D+++DGFLN 
Sbjct: 61  VAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNR 120

Query: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
            E+TKAFA LGS+FPF KA +GMVYAD N+DGLI E ELDKLI+YA+K +KKK
Sbjct: 121 MELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]

BLAST of CsGy5G011640 vs. NCBI nr
Match: XP_022930012.1 (calmodulin-2/4-like [Cucurbita moschata])

HSP 1 Score: 179.9 bits (455), Expect = 8.7e-42
Identity = 101/173 (58.38%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGKGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87
           M IP+LQ S AKYEAS+++KK  +NG  V L AFN  AR STQ+N N+ M  + L+ N +
Sbjct: 1   MFIPKLQASMAKYEASEMIKKSTRNGDNVQLKAFNGIARASTQVN-NQSMVPEILRDNKN 60

Query: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDHDGFLNI 147
           V  K SSN  L                    KASNMQFSREQ+KEIF+Y+DSD DGFLNI
Sbjct: 61  VGPKFSSNTHL--------------------KASNMQFSREQMKEIFRYHDSDKDGFLNI 120

Query: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           RE+TKAFA LGSI PF KA +GM YAD NKDGLI E ELDKL++YA KF+KKK
Sbjct: 121 RELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFIKKK 152

[Close]

BLAST of CsGy5G011640 vs. NCBI nr
Match: XP_023530739.1 (calmodulin-2/4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.1 bits (453), Expect = 1.5e-41
Identity = 101/173 (58.38%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGKGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87
           M IP+LQ S AKYEAS+++KK  +NG  V L AFN  AR STQ+N N+ M  + L+ N +
Sbjct: 1   MFIPKLQASMAKYEASEMIKKNTRNGDNVQLKAFNGIARASTQVN-NQGMVPEILRDNKN 60

Query: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDHDGFLNI 147
           V  K SSN  L                    KASNMQFSRE++KEIF+Y+DSD DGFLNI
Sbjct: 61  VGPKFSSNTHL--------------------KASNMQFSREKMKEIFRYHDSDKDGFLNI 120

Query: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           RE+TKAFA LGSI PF KA +GM YAD NKDGLI E ELDKL++YA KFMKKK
Sbjct: 121 RELTKAFAFLGSIIPFEKASYGMTYADANKDGLISEAELDKLVDYAQKFMKKK 152

[Close]

BLAST of CsGy5G011640 vs. TAIR10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.2e-06
Identity = 40/157 (25.48%), Postives = 69/157 (43.95%), Query Frame = 0


Query: 40  YEASKLMKKYEQNGKGVILSAFNDNARGS-TQINTNREMATKKLKPNDDVAHKLSSNAQL 99
           ++ SK + + + N    I  +F+ N  GS TQ+     +    +KP+ D    L   A  
Sbjct: 3   HKVSKKLDEEQINELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADT 62

Query: 100 KSNNQIRGKAQVPI--KRVYDTKASNMQFSREQIKEIFQYYDSDHDGFLNIREVTKAFAL 159
           KSN  +     V +    +         ++ EQ+  +F+ +D+D +GF+   E+  + A 
Sbjct: 63  KSNGLVEFPEFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAK 122

Query: 160 LGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYA 194
           LG      +    +  AD++ DG I   E  K IN A
Sbjct: 123 LGHALTVAELTGMIKEADSDGDGRINFQEFAKAINSA 159

[Close]

BLAST of CsGy5G011640 vs. TAIR10
Match: AT3G50770.1 (calmodulin-like 41)

HSP 1 Score: 44.3 bits (103), Expect = 1.0e-04
Identity = 31/121 (25.62%), Postives = 56/121 (46.28%), Query Frame = 0


Query: 77  MATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDT------------KASNMQ 136
           MAT+K KP+ + + K  S   LK N   + + + P      T               + Q
Sbjct: 1   MATQKEKPSSN-SFKWFSTKTLKLNLSFQNRRRSPKSNSSSTLXXXXXXXXXXXXIKSHQ 60

Query: 137 FSREQIKEIFQYYDSDHDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGED 186
            S+E+++++F ++DSD DG ++  E+   F  +G       A   +   DT+ DG +G +
Sbjct: 61  ASKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFE 120

[Close]

BLAST of CsGy5G011640 vs. TAIR10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 41.2 bits (95), Expect = 8.8e-04
Identity = 18/62 (29.03%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 128 EQIKEIFQYYDSDHDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELD 187
           E++K++F  +DS+ DG +++ E+   F  +G+ +   +    +   DT++DG I  DE  
Sbjct: 22  EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 188 KL 190
            L
Sbjct: 82  TL 83

[Close]

BLAST of CsGy5G011640 vs. Swiss-Prot
Match: sp|Q9AWK2|CML11_ORYSJ (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.0e-05
Identity = 41/141 (29.08%), Postives = 62/141 (43.97%), Query Frame = 0


Query: 57  ILSAFNDNARGS-TQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGK---AQVPI 116
           I  +F+ N  GS TQ+     + +  LKP+ D    L   A   SN  I      A V  
Sbjct: 68  IFRSFDRNGDGSLTQLELGSLLRSLGLKPSTDELDSLIQRADTNSNGLIEFSEFVALVAP 127

Query: 117 KRVYDTKASNMQFSREQIKEIFQYYDSDHDGFLNIREVTKAFALLGSIFPFNKAYHGMVY 176
           + +YD       +S +QI+ +F  +D D +GF+   E+  + A LG      +    +  
Sbjct: 128 ELLYD----RAPYSEDQIRRLFNIFDRDGNGFITAAELAHSMAKLGHALTVKELTGMIKE 187

Query: 177 ADTNKDGLIGEDELDKLINYA 194
           ADT+ DG I   E  + I  A
Sbjct: 188 ADTDGDGRISFQEFSRAITAA 204

[Close]

BLAST of CsGy5G011640 vs. Swiss-Prot
Match: sp|Q9LQN4|CML17_ARATH (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.8e-05
Identity = 40/157 (25.48%), Postives = 69/157 (43.95%), Query Frame = 0


Query: 40  YEASKLMKKYEQNGKGVILSAFNDNARGS-TQINTNREMATKKLKPNDDVAHKLSSNAQL 99
           ++ SK + + + N    I  +F+ N  GS TQ+     +    +KP+ D    L   A  
Sbjct: 3   HKVSKKLDEEQINELREIFRSFDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADT 62

Query: 100 KSNNQIRGKAQVPI--KRVYDTKASNMQFSREQIKEIFQYYDSDHDGFLNIREVTKAFAL 159
           KSN  +     V +    +         ++ EQ+  +F+ +D+D +GF+   E+  + A 
Sbjct: 63  KSNGLVEFPEFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAK 122

Query: 160 LGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYA 194
           LG      +    +  AD++ DG I   E  K IN A
Sbjct: 123 LGHALTVAELTGMIKEADSDGDGRINFQEFAKAINSA 159

[Close]

BLAST of CsGy5G011640 vs. TrEMBL
Match: tr|A0A0A0KLF3|A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.8e-105
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGKGVILSA 60
           MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNG+GVILSA
Sbjct: 1   MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGEGVILSA 60

Query: 61  FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA 120
           FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA
Sbjct: 61  FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA 120

Query: 121 SNMQFSREQIKEIFQYYDSDHDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL 180
           SNMQFSREQIKEIFQYYDSD DGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL
Sbjct: 121 SNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL 180

Query: 181 IGEDELDKLINYANKFMKKK 201
           IGEDELDKLINYANKFMKKK
Sbjct: 181 IGEDELDKLINYANKFMKKK 200

[Close]

BLAST of CsGy5G011640 vs. TrEMBL
Match: tr|A0A0A0KIY4|A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.4e-50
Identity = 115/176 (65.34%), Postives = 135/176 (76.70%), Query Frame = 0


Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGKGVILSAFNDNARGSTQINTNREMATK-KLKP-N 87
           M+I  LQ+SKAKYEASKLMKK+E N +GV L AFN     ST+IN  + MAT+  LKP N
Sbjct: 1   MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60

Query: 88  DDVAHKLSSNAQLKSNNQI-RGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDHDGF 147
             VAH L+SNA +  + Q+  GKAQV    V D KASNMQFSREQIKEIFQY+DSD+DGF
Sbjct: 61  HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120

Query: 148 LNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           LN+REVTKAFA LG+I P  KAYHGMVYAD NKDGLI +DEL+KL++YA KF  K+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]

BLAST of CsGy5G011640 vs. TrEMBL
Match: tr|A0A0A0KMQ1|A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.3e-45
Identity = 104/173 (60.12%), Postives = 129/173 (74.57%), Query Frame = 0


Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGKGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87
           M+I +LQ S A YEAS L+K+YE+NG  V + AF D+ R STQI  NRE   K LKP+D 
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAF-DDVRSSTQIG-NRESVLKILKPSDG 60

Query: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDHDGFLNI 147
           VAHKL S A ++   +  GK +  I RV D K+SNM  SRE+IKEIFQY+D+++DGFLN 
Sbjct: 61  VAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNR 120

Query: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
            E+TKAFA LGS+FPF KA +GMVYAD N+DGLI E ELDKLI+YA+K +KKK
Sbjct: 121 MELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]

BLAST of CsGy5G011640 vs. TrEMBL
Match: tr|A0A0A0LRC8|A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359950 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.8e-34
Identity = 89/178 (50.00%), Postives = 126/178 (70.79%), Query Frame = 0


Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGKGVI----LSAFNDNARGSTQINTNREMATKKL- 87
           M +  LQ + AK EA++L+KKY++NG GV+    L +F  +ARGSTQ+N  R +++  + 
Sbjct: 1   MSVSHLQ-AWAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVP 60

Query: 88  KPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDHD 147
           K N+++A K+SSN  +    Q+  KAQ        +K SN+  SREQIKEIF+Y+DS+ D
Sbjct: 61  KTNENLAQKVSSNTCITPKKQLLDKAQ------GSSKQSNVPLSREQIKEIFKYHDSNKD 120

Query: 148 GFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           GFL+IRE+TKAF+ +GSI PF KA + M YAD ++DGL+ E ELDKLI+YA+K +KKK
Sbjct: 121 GFLSIRELTKAFSSMGSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]

BLAST of CsGy5G011640 vs. TrEMBL
Match: tr|A0A1S3BDW2|A0A1S3BDW2_CUCME (probable calcium-binding protein CML11 OS=Cucumis melo OX=3656 GN=LOC103488544 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.9e-30
Identity = 82/174 (47.13%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGKGVILSAFNDNARGSTQINTNREMATKKL-KPND 87
           M +  LQ + AK EAS+L+KKY++NG GV+      +     ++   R +++  + K N+
Sbjct: 1   MSVSHLQ-AWAKIEASELIKKYDRNGDGVLTKEELQSFLHDARLKNIRFVSSSTIPKTNE 60

Query: 88  DVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDHDGFLN 147
           ++  K+SSN ++K   Q+  KAQ  +++      SN+  SREQIKEIF+Y+DS+ DGFL+
Sbjct: 61  NLDQKVSSNTRIKPKKQLLDKAQDSLRQ------SNVPLSREQIKEIFKYHDSNKDGFLS 120

Query: 148 IREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           IRE+TKAF  LGSI PF KA H M YAD ++DGLI E EL KLI+YA K +KKK
Sbjct: 121 IRELTKAFGSLGSIVPFAKARHAMAYADVDEDGLISEAELHKLIDYAEKIIKKK 167

The following BLAST results are available for this feature:

BLAST of CsGy5G011640 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49689.1	4.2e-105	99.00	hypothetical protein Csa_5G067670 [Cucumis sativus]	[more]
KGN49690.1	6.7e-50	65.34	hypothetical protein Csa_5G068170 [Cucumis sativus]	[more]
KGN49687.1	6.5e-45	60.12	hypothetical protein Csa_5G067410 [Cucumis sativus]	[more]
XP_022930012.1	8.7e-42	58.38	calmodulin-2/4-like [Cucurbita moschata]	[more]
XP_023530739.1	1.5e-41	58.38	calmodulin-2/4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G011640 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32250.1	3.2e-06	25.48	Calcium-binding EF-hand family protein	[more]
AT3G50770.1	1.0e-04	25.62	calmodulin-like 41	[more]
AT1G18210.1	8.8e-04	29.03	Calcium-binding EF-hand family protein	[more]

BLAST of CsGy5G011640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9AWK2\|CML11_ORYSJ	2.0e-05	29.08	Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q9LQN4\|CML17_ARATH	5.8e-05	25.48	Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 ...	[more]

BLAST of CsGy5G011640 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KLF3\|A0A0A0KLF3_CUCSA	2.8e-105	99.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067670 PE=4 SV=1	[more]
tr\|A0A0A0KIY4\|A0A0A0KIY4_CUCSA	4.4e-50	65.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G068170 PE=4 SV=1	[more]
tr\|A0A0A0KMQ1\|A0A0A0KMQ1_CUCSA	4.3e-45	60.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G067410 PE=4 SV=1	[more]
tr\|A0A0A0LRC8\|A0A0A0LRC8_CUCSA	5.8e-34	50.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359950 PE=4 SV=1	[more]
tr\|A0A1S3BDW2\|A0A1S3BDW2_CUCME	3.9e-30	47.13	probable calcium-binding protein CML11 OS=Cucumis melo OX=3656 GN=LOC103488544 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G011640.1	CsGy5G011640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 32..197 e-value: 4.6E-11 score: 44.9
None	No IPR available	PANTHER	PTHR44455	FAMILY NOT NAMED	coord: 114..197
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 127..188 e-value: 3.3E-7 score: 30.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 174..196 score: 6.842
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 125..160 score: 12.672
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 138..150
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 174..186
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 121..188

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G011640	Cla001912	Watermelon (97103) v1	cgybwmB408
CsGy5G011640	Csa5G067670	Cucumber (Chinese Long) v2	cgybcuB225
CsGy5G011640	CSPI05G01480	Wild cucumber (PI 183967)	cgybcpiB227
CsGy5G011640	CmaCh04G019140	Cucurbita maxima (Rimu)	cgybcmaB691
CsGy5G011640	CmoCh04G020320	Cucurbita moschata (Rifu)	cgybcmoB665
CsGy5G011640	Lsi11G000760	Bottle gourd (USVL1VR-Ls)	cgyblsiB309
CsGy5G011640	MELO3C026462.2	Melon (DHL92) v3.6.1	cgybmedB324
CsGy5G011640	CsaV3_5G015470	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G011640	Cla97C11G206700	Watermelon (97103) v2	cgybwmbB348

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None