Csa5G067670 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G067670
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionEF-hand domain-containing protein D2; contains IPR011992 (EF-hand-like domain)
LocationChr5 : 2098166 .. 2098768 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTGAAGTTTGTGCCATCTTCTAAATCTTCATATAGAAACAAATACATGGATGCCATAACCAAACCAAACCAAACCATGCATATCCCCCAACTTCAAATGTCCAAGGCCAAGTATGAAGCAAGTAAGTTGATGAAGAAGTATGAACAAAATGGTGAAGGTGTTATACTAAGTGCTTTCAACGATAATGCTCGAGGTTCGACTCAAATCAACACTAATCGAGAAATGGCGACAAAAAAGCTAAAACCTAACGATGATGTTGCGCACAAACTTAGTTCAAATGCTCAATTAAAATCAAATAATCAAATACGAGGAAAAGCTCAAGTACCCATCAAAAGAGTTTATGATACAAAGGCATCTAACATGCAATTTAGTCGAGAGCAGATAAAGGAAATTTTTCAATACTATGATAGCGACCGTGACGGTTTTCTCAACATAAGAGAGGTGACAAAAGCTTTTGCTCTTCTAGGATCAATTTTTCCATTCAACAAAGCCTACCATGGCATGGTATATGCTGATACTAATAAAGATGGACTCATTGGTGAAGATGAACTCGACAAACTCATAAATTATGCAAATAAATTTATGAAGAAAAAATGA

mRNA sequence

ATGGTGTTGAAGTTTGTGCCATCTTCTAAATCTTCATATAGAAACAAATACATGGATGCCATAACCAAACCAAACCAAACCATGCATATCCCCCAACTTCAAATGTCCAAGGCCAAGTATGAAGCAAGTAAGTTGATGAAGAAGTATGAACAAAATGGTGAAGGTGTTATACTAAGTGCTTTCAACGATAATGCTCGAGGTTCGACTCAAATCAACACTAATCGAGAAATGGCGACAAAAAAGCTAAAACCTAACGATGATGTTGCGCACAAACTTAGTTCAAATGCTCAATTAAAATCAAATAATCAAATACGAGGAAAAGCTCAAGTACCCATCAAAAGAGTTTATGATACAAAGGCATCTAACATGCAATTTAGTCGAGAGCAGATAAAGGAAATTTTTCAATACTATGATAGCGACCGTGACGGTTTTCTCAACATAAGAGAGGTGACAAAAGCTTTTGCTCTTCTAGGATCAATTTTTCCATTCAACAAAGCCTACCATGGCATGGTATATGCTGATACTAATAAAGATGGACTCATTGGTGAAGATGAACTCGACAAACTCATAAATTATGCAAATAAATTTATGAAGAAAAAATGA

Coding sequence (CDS)

ATGGTGTTGAAGTTTGTGCCATCTTCTAAATCTTCATATAGAAACAAATACATGGATGCCATAACCAAACCAAACCAAACCATGCATATCCCCCAACTTCAAATGTCCAAGGCCAAGTATGAAGCAAGTAAGTTGATGAAGAAGTATGAACAAAATGGTGAAGGTGTTATACTAAGTGCTTTCAACGATAATGCTCGAGGTTCGACTCAAATCAACACTAATCGAGAAATGGCGACAAAAAAGCTAAAACCTAACGATGATGTTGCGCACAAACTTAGTTCAAATGCTCAATTAAAATCAAATAATCAAATACGAGGAAAAGCTCAAGTACCCATCAAAAGAGTTTATGATACAAAGGCATCTAACATGCAATTTAGTCGAGAGCAGATAAAGGAAATTTTTCAATACTATGATAGCGACCGTGACGGTTTTCTCAACATAAGAGAGGTGACAAAAGCTTTTGCTCTTCTAGGATCAATTTTTCCATTCAACAAAGCCTACCATGGCATGGTATATGCTGATACTAATAAAGATGGACTCATTGGTGAAGATGAACTCGACAAACTCATAAATTATGCAAATAAATTTATGAAGAAAAAATGA

Protein sequence

MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK*
Homology
[Close]
BLAST of Csa5G067670 vs. Swiss-Prot
Match: CML11_ORYSJ (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica GN=CML11 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.0e-06
Identity = 40/156 (25.64%), Postives = 66/156 (42.31%), Query Frame = 1 

Query: 41  EASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKS 100
           E  ++ + +++NG+G +           TQ+     + +  LKP+ D    L   A   S
Sbjct: 64  ELREIFRSFDRNGDGSL-----------TQLELGSLLRSLGLKPSTDELDSLIQRADTNS 123

Query: 101 NNQIRGK---AQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALL 160
           N  I      A V  + +YD       +S +QI+ +F  +D D +GF+   E+  + A L
Sbjct: 124 NGLIEFSEFVALVAPELLYD----RAPYSEDQIRRLFNIFDRDGNGFITAAELAHSMAKL 183

Query: 161 GSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYA 194
           G      +    +  ADT+ DG I   E  + I  A
Sbjct: 184 GHALTVKELTGMIKEADTDGDGRISFQEFSRAITAA 204

[Close]
BLAST of Csa5G067670 vs. Swiss-Prot
Match: EFHD2_MOUSE (EF-hand domain-containing protein D2 OS=Mus musculus GN=Efhd2 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.8e-06
Identity = 38/123 (30.89%), Postives = 60/123 (48.78%), Query Frame = 1 

Query: 42  ASKLMKKYEQNGEG--VILSAFNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLK 101
           ASKL ++ +  GEG         + A  +       E A      +D+++ KL   A L 
Sbjct: 7   ASKLSRRLQMEGEGGEATEQPGLNGAAAAAAAEAPDETAQALGSADDELSAKLLRRADL- 66

Query: 102 SNNQIRGKAQVPIKRVYDTKASNMQFSREQIKE---IFQYYDSDRDGFLNIREVTKAFAL 160
             NQ  G+ Q P +RV++      +FSR+QIK+   +F+ YD+ RDGF+++ E+      
Sbjct: 67  --NQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEK 126

[Close]
BLAST of Csa5G067670 vs. TrEMBL
Match: A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 2.5e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 

Query: 1   MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGEGVILSA 60
           MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGEGVILSA
Sbjct: 1   MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGEGVILSA 60

Query: 61  FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA 120
           FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA
Sbjct: 61  FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA 120

Query: 121 SNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL 180
           SNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL
Sbjct: 121 SNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL 180

Query: 181 IGEDELDKLINYANKFMKKK 201
           IGEDELDKLINYANKFMKKK
Sbjct: 181 IGEDELDKLINYANKFMKKK 200

[Close]
BLAST of Csa5G067670 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.3e-52
Identity = 116/176 (65.91%), Postives = 134/176 (76.14%), Query Frame = 1 

Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKK-LKP-N 87
           M+I  LQ+SKAKYEASKLMKK+E N EGV L AFN     ST+IN  + MAT+  LKP N
Sbjct: 1   MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60

Query: 88  DDVAHKLSSNAQLKSNNQI-RGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGF 147
             VAH L+SNA +  + Q+  GKAQV    V D KASNMQFSREQIKEIFQY+DSD DGF
Sbjct: 61  HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120

Query: 148 LNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           LN+REVTKAFA LG+I P  KAYHGMVYAD NKDGLI +DEL+KL++YA KF  K+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]
BLAST of Csa5G067670 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.5e-47
Identity = 104/173 (60.12%), Postives = 129/173 (74.57%), Query Frame = 1 

Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87
           M+I +LQ S A YEAS L+K+YE+NG+ V + AF+D  R STQI  NRE   K LKP+D 
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDD-VRSSTQIG-NRESVLKILKPSDG 60

Query: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147
           VAHKL S A ++   +  GK +  I RV D K+SNM  SRE+IKEIFQY+D++ DGFLN 
Sbjct: 61  VAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNR 120

Query: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
            E+TKAFA LGS+FPF KA +GMVYAD N+DGLI E ELDKLI+YA+K +KKK
Sbjct: 121 MELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]
BLAST of Csa5G067670 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-36
Identity = 89/178 (50.00%), Postives = 128/178 (71.91%), Query Frame = 1 

Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVI----LSAFNDNARGSTQINTNREMATKKL- 87
           M +  LQ + AK EA++L+KKY++NG+GV+    L +F  +ARGSTQ+N  R +++  + 
Sbjct: 1   MSVSHLQ-AWAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVP 60

Query: 88  KPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRD 147
           K N+++A K+SSN  +    Q+  KAQ        +K SN+  SREQIKEIF+Y+DS++D
Sbjct: 61  KTNENLAQKVSSNTCITPKKQLLDKAQG------SSKQSNVPLSREQIKEIFKYHDSNKD 120

Query: 148 GFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           GFL+IRE+TKAF+ +GSI PF KA + M YAD ++DGL+ E ELDKLI+YA+K +KKK
Sbjct: 121 GFLSIRELTKAFSSMGSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]
BLAST of Csa5G067670 vs. TrEMBL
Match: A0A0A0LKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.5e-17
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 1 

Query: 121 SNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL 180
           S   FSRE++KEIF+ +D D DG+L+I E+ KA   LG   PF KA++GM Y D N DGL
Sbjct: 7   SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 181 IGEDELDKLINYANKFMKKK 201
           I EDELDKLI+YA +F K++
Sbjct: 67  ISEDELDKLIDYAERFQKRR 86

[Close]
BLAST of Csa5G067670 vs. NCBI nr
Match: gi|700194512|gb|KGN49689.1| (hypothetical protein Csa_5G067670 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 3.6e-108
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 

Query: 1   MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGEGVILSA 60
           MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGEGVILSA
Sbjct: 1   MVLKFVPSSKSSYRNKYMDAITKPNQTMHIPQLQMSKAKYEASKLMKKYEQNGEGVILSA 60

Query: 61  FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA 120
           FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA
Sbjct: 61  FNDNARGSTQINTNREMATKKLKPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKA 120

Query: 121 SNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL 180
           SNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL
Sbjct: 121 SNMQFSREQIKEIFQYYDSDRDGFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGL 180

Query: 181 IGEDELDKLINYANKFMKKK 201
           IGEDELDKLINYANKFMKKK
Sbjct: 181 IGEDELDKLINYANKFMKKK 200

[Close]
BLAST of Csa5G067670 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 4.8e-52
Identity = 116/176 (65.91%), Postives = 134/176 (76.14%), Query Frame = 1 

Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKK-LKP-N 87
           M+I  LQ+SKAKYEASKLMKK+E N EGV L AFN     ST+IN  + MAT+  LKP N
Sbjct: 1   MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSN 60

Query: 88  DDVAHKLSSNAQLKSNNQI-RGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGF 147
             VAH L+SNA +  + Q+  GKAQV    V D KASNMQFSREQIKEIFQY+DSD DGF
Sbjct: 61  HPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGF 120

Query: 148 LNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           LN+REVTKAFA LG+I P  KAYHGMVYAD NKDGLI +DEL+KL++YA KF  K+
Sbjct: 121 LNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR 176

[Close]
BLAST of Csa5G067670 vs. NCBI nr
Match: gi|700194510|gb|KGN49687.1| (hypothetical protein Csa_5G067410 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 7.9e-47
Identity = 104/173 (60.12%), Postives = 129/173 (74.57%), Query Frame = 1 

Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKLKPNDD 87
           M+I +LQ S A YEAS L+K+YE+NG+ V + AF+D  R STQI  NRE   K LKP+D 
Sbjct: 1   MYISKLQASMAMYEASMLIKQYEKNGDAVKVKAFDD-VRSSTQIG-NRESVLKILKPSDG 60

Query: 88  VAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLNI 147
           VAHKL S A ++   +  GK +  I RV D K+SNM  SRE+IKEIFQY+D++ DGFLN 
Sbjct: 61  VAHKLRSEAHIQPTQRTGGKGKKSITRVLDRKSSNMSLSRERIKEIFQYHDNNNDGFLNR 120

Query: 148 REVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
            E+TKAFA LGS+FPF KA +GMVYAD N+DGLI E ELDKLI+YA+K +KKK
Sbjct: 121 MELTKAFAFLGSMFPFYKACYGMVYADANEDGLISEAELDKLIDYASKIIKKK 171

[Close]
BLAST of Csa5G067670 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 2.8e-36
Identity = 89/178 (50.00%), Postives = 128/178 (71.91%), Query Frame = 1 

Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVI----LSAFNDNARGSTQINTNREMATKKL- 87
           M +  LQ + AK EA++L+KKY++NG+GV+    L +F  +ARGSTQ+N  R +++  + 
Sbjct: 1   MSVSHLQ-AWAKNEANELIKKYDRNGDGVLTKEELQSFLRDARGSTQLNNIRNVSSSTVP 60

Query: 88  KPNDDVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRD 147
           K N+++A K+SSN  +    Q+  KAQ        +K SN+  SREQIKEIF+Y+DS++D
Sbjct: 61  KTNENLAQKVSSNTCITPKKQLLDKAQG------SSKQSNVPLSREQIKEIFKYHDSNKD 120

Query: 148 GFLNIREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           GFL+IRE+TKAF+ +GSI PF KA + M YAD ++DGL+ E ELDKLI+YA+K +KKK
Sbjct: 121 GFLSIRELTKAFSSMGSIVPFCKARYAMAYADVDEDGLVSEAELDKLIDYAHKIIKKK 171

[Close]
BLAST of Csa5G067670 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32
Identity = 82/174 (47.13%), Postives = 118/174 (67.82%), Query Frame = 1 

Query: 28  MHIPQLQMSKAKYEASKLMKKYEQNGEGVILSAFNDNARGSTQINTNREMATKKL-KPND 87
           M +  LQ + AK EAS+L+KKY++NG+GV+      +     ++   R +++  + K N+
Sbjct: 1   MSVSHLQ-AWAKIEASELIKKYDRNGDGVLTKEELQSFLHDARLKNIRFVSSSTIPKTNE 60

Query: 88  DVAHKLSSNAQLKSNNQIRGKAQVPIKRVYDTKASNMQFSREQIKEIFQYYDSDRDGFLN 147
           ++  K+SSN ++K   Q+  KAQ  +++      SN+  SREQIKEIF+Y+DS++DGFL+
Sbjct: 61  NLDQKVSSNTRIKPKKQLLDKAQDSLRQ------SNVPLSREQIKEIFKYHDSNKDGFLS 120

Query: 148 IREVTKAFALLGSIFPFNKAYHGMVYADTNKDGLIGEDELDKLINYANKFMKKK 201
           IRE+TKAF  LGSI PF KA H M YAD ++DGLI E EL KLI+YA K +KKK
Sbjct: 121 IRELTKAFGSLGSIVPFAKARHAMAYADVDEDGLISEAELHKLIDYAEKIIKKK 167

The following BLAST results are available for this feature:
BLAST of Csa5G067670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML11_ORYSJ4.0e-0625.64Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica GN=CML11 ... [more]
EFHD2_MOUSE6.8e-0630.89EF-hand domain-containing protein D2 OS=Mus musculus GN=Efhd2 PE=1 SV=1[more]
BLAST of Csa5G067670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLF3_CUCSA2.5e-108100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1[more]
A0A0A0KIY4_CUCSA3.3e-5265.91Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1[more]
A0A0A0KMQ1_CUCSA5.5e-4760.12Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1[more]
A0A0A0LRC8_CUCSA2.0e-3650.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1[more]
A0A0A0LKX1_CUCSA3.5e-1756.25Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1[more]
BLAST of Csa5G067670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700194512|gb|KGN49689.1|3.6e-108100.00hypothetical protein Csa_5G067670 [Cucumis sativus][more]
gi|700194513|gb|KGN49690.1|4.8e-5265.91hypothetical protein Csa_5G068170 [Cucumis sativus][more]
gi|700194510|gb|KGN49687.1|7.9e-4760.12hypothetical protein Csa_5G067410 [Cucumis sativus][more]
gi|449470190|ref|XP_004152801.1|2.8e-3650.00PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus][more]
gi|659089539|ref|XP_008445564.1|1.9e-3247.13PREDICTED: probable calcium-binding protein CML11 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G067670.1Csa5G067670.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 130..158
score: 1.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 125..160
score: 12.617coord: 174..196
score: 6
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 119..191
score: 2.2
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 121..188
score: 1.06
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 138..150
score: -coord: 174..186
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 121..193
score: 1.7
NoneNo IPR availablePANTHERPTHR10891:SF592CALCIUM-BINDING PROTEIN CML38-RELATEDcoord: 121..193
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa5G067670Cla001912Watermelon (97103) v1cuwmB436
Csa5G067670ClCG11G000380Watermelon (Charleston Gray)cuwcgB363
Csa5G067670Lsi11G000760Bottle gourd (USVL1VR-Ls)culsiB338
Csa5G067670MELO3C026462.2Melon (DHL92) v3.6.1cumedB365
Csa5G067670CSPI05G01480Wild cucumber (PI 183967)cpicuB240
Csa5G067670Cucsa.261780Cucumber (Gy14) v1cgycuB378
Csa5G067670CmaCh04G019140Cucurbita maxima (Rimu)cmacuB760
Csa5G067670CmoCh04G020360Cucurbita moschata (Rifu)cmocuB745
Csa5G067670CsGy5G011640Cucumber (Gy14) v2cgybcuB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa5G067670Cucurbita pepo (Zucchini)cpecuB448