Csa5G068170 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCATAGAAACAAATATATAGTATTAACCAGATGTATATCTCAAATCTTCAAGTTTCCAAGGCCAAGTATGAAGCAAGTAAGTTGATGAAGAAACATGAAAATAATGACGAAGGTGTTCCACTTAAAGCTTTCAATGGCATTCCTCCAGCTTCAACTAAAATCAACAACAAGCAAGCAATGGCAACGGAAATTATCCTGAAACCTAGTAATCATCCTGTTGCACACTACCTTACATCAAATGCCTATATGATACCAAGTAAGCAATTGGGAGCTGGAAAAGCTCAAGTAACCACCACAAGTGTTCTTGATATAAAGGCTTCTAATATGCAATTTAGTCGAGAGCAAATAAAAGAAATTTTTCAGTATCATGATAGCGACAATGATGGTTTTCTCAACCTAAGGGAGGTAACCAAAGCTTTTGCTTTTCTAGGCACAATTCTTCCATTATACAAAGCCTACCATGGCATGGTATACGCTGATGCTAACAAAGATGGTCTTATTAGCAAGGATGAACTCGAAAAACTCGTTGATTATGCATATAAATTTTTCAACAAACGATGAATGTTCTTAGCTATTTTCACGTGCATTTTATGTGCTGAGGTAATATTTGAAAGTTGTAAAAGTATAAGTAAAATAAAGAATTCGTCTACCATTTTTATTTTACTT ATGTATATCTCAAATCTTCAAGTTTCCAAGGCCAAGTATGAAGCAAGTAAGTTGATGAAGAAACATGAAAATAATGACGAAGGTGTTCCACTTAAAGCTTTCAATGGCATTCCTCCAGCTTCAACTAAAATCAACAACAAGCAAGCAATGGCAACGGAAATTATCCTGAAACCTAGTAATCATCCTGTTGCACACTACCTTACATCAAATGCCTATATGATACCAAGTAAGCAATTGGGAGCTGGAAAAGCTCAAGTAACCACCACAAGTGTTCTTGATATAAAGGCTTCTAATATGCAATTTAGTCGAGAGCAAATAAAAGAAATTTTTCAGTATCATGATAGCGACAATGATGGTTTTCTCAACCTAAGGGAGGTAACCAAAGCTTTTGCTTTTCTAGGCACAATTCTTCCATTATACAAAGCCTACCATGGCATGGTATACGCTGATGCTAACAAAGATGGTCTTATTAGCAAGGATGAACTCGAAAAACTCGTTGATTATGCATATAAATTTTTCAACAAACGATGA ATGTATATCTCAAATCTTCAAGTTTCCAAGGCCAAGTATGAAGCAAGTAAGTTGATGAAGAAACATGAAAATAATGACGAAGGTGTTCCACTTAAAGCTTTCAATGGCATTCCTCCAGCTTCAACTAAAATCAACAACAAGCAAGCAATGGCAACGGAAATTATCCTGAAACCTAGTAATCATCCTGTTGCACACTACCTTACATCAAATGCCTATATGATACCAAGTAAGCAATTGGGAGCTGGAAAAGCTCAAGTAACCACCACAAGTGTTCTTGATATAAAGGCTTCTAATATGCAATTTAGTCGAGAGCAAATAAAAGAAATTTTTCAGTATCATGATAGCGACAATGATGGTTTTCTCAACCTAAGGGAGGTAACCAAAGCTTTTGCTTTTCTAGGCACAATTCTTCCATTATACAAAGCCTACCATGGCATGGTATACGCTGATGCTAACAAAGATGGTCTTATTAGCAAGGATGAACTCGAAAAACTCGTTGATTATGCATATAAATTTTTCAACAAACGATGA MYISNLQVSKAKYEASKLMKKHENNDEGVPLKAFNGIPPASTKINNKQAMATEIILKPSNHPVAHYLTSNAYMIPSKQLGAGKAQVTTTSVLDIKASNMQFSREQIKEIFQYHDSDNDGFLNLREVTKAFAFLGTILPLYKAYHGMVYADANKDGLISKDELEKLVDYAYKFFNKR*
BLAST of Csa5G068170 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 2.4e-94 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of Csa5G068170 vs. TrEMBL
Match: A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.9e-52 Identity = 116/176 (65.91%), Postives = 134/176 (76.14%), Query Frame = 1
BLAST of Csa5G068170 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 6.6e-44 Identity = 100/176 (56.82%), Postives = 134/176 (76.14%), Query Frame = 1
BLAST of Csa5G068170 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 7.1e-30 Identity = 80/180 (44.44%), Postives = 124/180 (68.89%), Query Frame = 1
BLAST of Csa5G068170 vs. TrEMBL
Match: A0A0A0LKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.8e-18 Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 1
BLAST of Csa5G068170 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus]) HSP 1 Score: 352.8 bits (904), Expect = 3.4e-94 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1
BLAST of Csa5G068170 vs. NCBI nr
Match: gi|700194512|gb|KGN49689.1| (hypothetical protein Csa_5G067670 [Cucumis sativus]) HSP 1 Score: 213.0 bits (541), Expect = 4.2e-52 Identity = 116/176 (65.91%), Postives = 134/176 (76.14%), Query Frame = 1
BLAST of Csa5G068170 vs. NCBI nr
Match: gi|700194510|gb|KGN49687.1| (hypothetical protein Csa_5G067410 [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 9.4e-44 Identity = 100/176 (56.82%), Postives = 134/176 (76.14%), Query Frame = 1
BLAST of Csa5G068170 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus]) HSP 1 Score: 138.7 bits (348), Expect = 1.0e-29 Identity = 80/180 (44.44%), Postives = 124/180 (68.89%), Query Frame = 1
BLAST of Csa5G068170 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo]) HSP 1 Score: 130.6 bits (327), Expect = 2.8e-27 Identity = 79/176 (44.89%), Postives = 114/176 (64.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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