CmaCh17G005060 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G005060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	At2g46730/F19D11.1
Location	Cma_Chr17 : 3323580 .. 3328373 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGTGTTAGCCACAAACTAAGAACCATGTGGGCTGCCTTCTCAACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTGCCAACCAGGCCGCTTCCGACACCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCCACCCGACACCGACGCCGATAACGCCACACCAAACAACAGTAGCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAAATCCACAAATCCCAAATCCCGCAGCCCCATACGAAAACAGGAATCGCAATTGGAGACTGCCAAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAGAACAGAACCCGACAAGTGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTTGAGACTTACTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAGACGGTTTGATGATTCTATCATTCTCTTTTTATTACAATTGTCAATGAATTTTATATTCATGTGCAGTGTTTATTAGAATTGTCAATGAGTTCCCAACATTTGAATATGAATCCATGTTAAATCACTGCTGTATATATGACTTTTAATATTGTATGCACATTCTTTATGCCACTCCTCCATTTGGGAACCCTTCTGAGCTTTGTTCTGACTGTTGAAATAGATGAAGAAACTACCACTTCTTTGTCATGGTTAGTGGCTCTTTCTTGTTGTGCTTGTTGGTCAGAAATTAAAAGGGTTTTGTTGAGAATTGTTAGGTGGAGAGTCGCTGATTAAGAGGAAGTTCATCGGTTTATAAGCAAGGATTGTATGAGGCATTTTGAGGAAACCAAAAGCAAAGTCACAAGAGCTGATGCTCAAAGTGAACCATCGTACCATTGTGGAGAGTCGTAGTTCCTATCGGTGTCTTGATAGAAACCATAGGTCACCCACCTTAATAATTTCTGCACACCCTATGAGTCTTACAAAGCTTCCAAGACCCATCTCTAGAAGAACTCTATATAGATAGAGACTAAAGTGACAGAGTCTTGCCATAACATGTGAGCCCAGAAATGATAGCCATATGATGCCCAAGCTTCCTAGGACTAGATTGTATCTGCTTGCTACATTCGTGAAACAGATAGGAAGGAGACAATAGGGAATTATAATGGACAAAAAAGAAACAAGTCCAAATAGGAATGAGTGTCTCATCAAGCTGCAGGAAGAGTCCTCTGCTTCAGACTTACGAGTCAGAGGTAAGTAACAGATCATGAGGATTGTTGGGAGAAGAGTCCCATATCGGCAAATTAAGGGGTTGATCATGGGTTTATGCGAGGAATACATCTCCATCCGTATGAAGCCTTTTGGGGAAATAAAAAACAAAGCCACGAGAGCTTATGCTCAAAGTTGACAACATTATATCATTGTGGAGAGTCGTAGTTTTGAACATGGCATCAAAGCCATGCTCTTAACTTAGTCATGCCAATAAAATCCTCAAGTGTCGAACAAATAAGTTGTGAGCCATAAAAGTATAGTCAAAAGTGACTCAAGTGTCGAATAAAGGGTGTTTTGTTCAAGGACTTGATTAAGGGGAGACTGTTCGAGTGTTCCATAGGACCTCAGGGGAGGTTCCATGGGCCATTGTGGAGAGTCGTAATTTCTAACAACAGAGTGACGTAGCTTTAGAGATTCAACCCTTGTTATATTTTCTTGAACAAGAAAGACTGGATGTTTTCGTTACTGATAGCATAAATCTCTGGAAACTTTTATGGGATCGGGGATCGAGTCTTCTAAACATGGTCTTTTTAAGTTATTGTTTAGACCAAAGTCATGATACTCTTTTATGAAATCAACTTATGCATACATTGTGCTCCTTCTTTTAGCCTCAAATCACGGCTATAACAACATTACAATCTGTCCCAAAACTGCATAGTAATAGATGATGCACTCCTTGGATTTGGGGATCTCTTTGATCTTTCTTGGTGCGCTCTAAGAGAAACTGTTACTTTACAGGTTTGTTTAAATTATTGTTAATTTAAACAAATCTTTGAACCCTTTTATGCCTGCAATAACGTGATCCTGTTTTGGTGGAATTCTCCTTACAATTGTTTCCATTTTCTTCTCTGATCAAGTGGTAAAAAAATTTCCACTGAAAATGCAACTTAACAATGATAGATATATGTAACTCTTTTTTAGAGTTTCCATTGTAATTTGATTATTTAGGTTTGTTTTTATGGTAGGCGTTAATAATATCCCTAAACTTTCACACGTTTCATTTTGTTTCAAAATAACCTTTTTGGGAAGTTTTCAGCTAAAATGAAGGTGGAGAGAGATGTGGCATAGGTGTATGTTTCAATTATCAATGTTGCTCGTGAACTTTAGTGTATGCTTCAATATTTTCAAACTTTAACTTTTGAAATTGTTTCAAAATAACCATTGTATTTGTTTTCTAGTTATGAGCCGGAGAAAGACACCAAATAATCTTAGTTACATTCAAAACGAAGCTTTATATAAGGGTGGAAAAAAAAGGGAGATTATGGCAAAATATTGTTTCCTTCCCCATTAAAAAAATTTGAGGGAATTTAAAATTTTACTAATCCAGAAGGGAACGACAAAAACTTAAGTTGTAGGGATGCCCCAAAACACTAGGATGTTACTCTTTTTCTTTATTGCTCTTCTACCGTCGCTTTCAATTGACTTTTCTCCTATCCACCGAATTTTAGCGGCATAAATGAAAATTGAACCAATATCACGTATACTATCCTTTTACAAGTCATTATCACATCACTTTTCCGTCTTCCTTTAATGGAATAGTTGACATAAACATTATCTTGTAAGTTTAAGAGTGAAACTATTGAAAATAGAATTAATCTTCCCTTATTACTAAGAAGCATAAACACCTTATGGACATGTACACATACTGATCTCTTGTTAGTGCAATAGATGTGTTAGACATTCTTTGTACTAAGCCAAAAAGTAGGTCCGACGTTTGTTTGAGATGCACCAACACTCCGATAAGCATATGAAAGAAACAAAAATAATACAATTTAGAGGAATGTTAGATTCTTAGAATGAAAATGAAGAGAAGAAAATTATTGCATTCCCCAACTGTGTGGACTTGTTTATCATCTCAGCCACCTCCTGAGATCAGTGGTTGATGATGGAGAAACCTCTCCTCCATAGCTCTCTGTATAGCAAGAAGAATAGTTAGACTGATCCTCCAACCCACCATACCTTCCATAAGCACTCTTAAAACTTGGACTCTTCATCTCATTCCCATGAACACCACCACACCCCACCACTCTACTGTATGGATCTGGCGGTACCGGAAACGATAGCCGTTTCCTTGCAGTCCCAACTCGTTCCCTTTCCGGAGTTGCAGGCCTTTGCCTCGGTGCACTCTGTGACCGGACTCGAGCCTTGGCTGACTCTGTTGCAGCCATGTAATTAGGCAGTGAAGTTTCACCAATACCACCCCCTTTGTGATGTTGATGTTTAGACCTCAAGCTTGGCGTTTGAGGTGTAATGTGGTGGCTAATTTGGTTTCTATCTTCTCTGTTGTAGCGAGGACTTGCCGACCGAATTTGCTGGACTGGTCGGGATTTTGACGGGGACGGGGTGATGGGGAATTGGCTGTGATGGGCTCTATGGAGTGGGGAGGAAGATGGAAGCATGTTTGATCTTTGTGATTGAATTTGATAATTGGTAGTGTGGAAATTGTTGGGAGATAAGTAAGTGTATGGTCGAGAGGTGTCAATTTCAAGCGTTTTAAGTGGCTGTGGTCTGTTATCAGTGGAAGCTCTTGCCCTGCTCTCCCATGGCTTCTTAGCCATCCAATGATCCAGCCATTTTGATCCTTCTTCAAGCTCCATTTGGTTTCCTATTGATGGGCTCCTTCCAGTCCTCCATATCTAAAACATGTTTAGCATTCAAAACATAACAATTGTTGATTAAACGATGGAATGAGATATGAATTCAAACCTGTTGAGAAAAGGATTGAGATAAAATGTTGTCACGATTCAAAGCAGAGTCTCGTCTGTGTTGTAACATTGCCTTAACTTGTTCAACAGTGTGAGCACGTTCATCCCAGTCGTCTGTAACGCTGCTTCCTTCTCTTGATACACATTTGTCTTGAACATAGCGAGATTCATAGATACTGTTGGTATCGCTGAAGGTGGACCGTCGGCTGCCTTCAAGGGAGAGCCGCATACGGTGATCCAACACTTTCTCTTGTACTCTAACTAATGCTTTCATGCACTGCAGGGTTGTCTTTGCTTGTTTCCTTACATTATGGCCTCTCACCAATGCCTGCAACTTCACCAGCCCCTTCAGTGCCCGTAGAGCCCTCCTTGCCTTCCAAAATTCAAAAGTTAAAAAGGGTATCTATTCACATTATGACAAATTTACAGAGTTGAGAGCTCACCAGATATCCTCGAAAGGCGGTTTGAATGAGAATGGCAGAGTAAGAATGGCGATCCAATGGAGCAGGGGCAGGGGTGGTGAGGTGAAGAGGTTGTGCAGCCGGTGTGGCATGTTTGTGATCAGTGGGGAGAGGCGGTTGGAGGGGAGGGAGTGGCTCCGGCGGCTGAGATGCTGATTTTCTGAAAATCCAGCGGCGTTTCTCCCGCCTCTGCAGAAAAAAGTAGGACGAATCAGAAGAAGAAGAAGGAAATGAAAATTAAAGGGTACCTTTTGGTCATCATCTTTGGTGGGAGATCTGAAAGCCCTTTTGACGGCGGTCAGCCATGA

mRNA sequence

CTTGGTGTTAGCCACAAACTAAGAACCATGTGGGCTGCCTTCTCAACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTGCCAACCAGGCCGCTTCCGACACCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCCACCCGACACCGACGCCGATAACGCCACACCAAACAACAGTAGCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAAATCCACAAATCCCAAATCCCGCAGCCCCATACGAAAACAGGAATCGCAATTGGAGACTGCCAAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAGAACAGAACCCGACAAGTGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTTGAGACTTACTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAGACGCGAGGACTTGCCGACCGAATTTGCTGGACTGGTCGGGATTTTGACGGGGACGGGATACTGTTGGTATCGCTGAAGGTGGACCGTCGGCTGCCTTCAAGGGAGAGCCGCATACGGGTTGTCTTTGCTTGTTTCCTTACATTATGGCCTCTCACCAATGCCTGCAACTTCACCAGCCCCTTCAGTGCCCGTAGAGCCCTCCTTGCCTTCCAAAATTCAAAAGTTAAAAAGGGTATCTATTCACATTATGACAAATTTACAGAGTTGAGAGCTCACCAGATATCCTCGAAAGGCGGTTTGAATGAGAATGGCAGAGTAAGAATGGCGATCCAATGGAGCAGGGGCAGGGGTGGTGAGGTGAAGAGGTTGTGCAGCCGGTGTGGCATCGGCGTTTCTCCCGCCTCTGCAGAAAAAAGTAGGACGAATCAGAAGAAGAAGAAGGAAATGAAAATTAAAGGGTACCTTTTGGTCATCATCTTTGGTGGGAGATCTGAAAGCCCTTTTGACGGCGGTCAGCCATGA

Coding sequence (CDS)

ATGTGGGCTGCCTTCTCAACCTCACCGAGCCCGTCCTGCTGCCGCCTCCCGCTGCCAACCAGGCCGCTTCCGACACCTCCGGTCTCCGCCATCTACGCGAAGGCTCAGCCACCCGACACCGACGCCGATAACGCCACACCAAACAACAGTAGCAGCATCAAAAGCTTCGGCCACAAAATTCTCTCGGCCGCGAAATCCACAAATCCCAAATCCCGCAGCCCCATACGAAAACAGGAATCGCAATTGGAGACTGCCAAAATTAGTGGGTTAGATGTTCTGAGGGCACTGCAGAAGGCGGCCGCCGTGAAGGAGAAGAACAGAACCCGACAAGTGAAAGAACAGAAGAAAGACGGGCCGCCTCCCACCGAAGGGAGCGGCTCTGATAACTCTGAGATGAACCGTAGAGTGAGGCCTCTGAGAATCAAGAACGATTGGGGCTTGAGACTTACTGAGTTGGAGAAACGCCTTCAGGAGATCTCTGAGACGCGAGGACTTGCCGACCGAATTTGCTGGACTGGTCGGGATTTTGACGGGGACGGGATACTGTTGGTATCGCTGAAGGTGGACCGTCGGCTGCCTTCAAGGGAGAGCCGCATACGGGTTGTCTTTGCTTGTTTCCTTACATTATGGCCTCTCACCAATGCCTGCAACTTCACCAGCCCCTTCAGTGCCCGTAGAGCCCTCCTTGCCTTCCAAAATTCAAAAGTTAAAAAGGGTATCTATTCACATTATGACAAATTTACAGAGTTGAGAGCTCACCAGATATCCTCGAAAGGCGGTTTGAATGAGAATGGCAGAGTAAGAATGGCGATCCAATGGAGCAGGGGCAGGGGTGGTGAGGTGAAGAGGTTGTGCAGCCGGTGTGGCATCGGCGTTTCTCCCGCCTCTGCAGAAAAAAGTAGGACGAATCAGAAGAAGAAGAAGGAAATGAAAATTAAAGGGTACCTTTTGGTCATCATCTTTGGTGGGAGATCTGAAAGCCCTTTTGACGGCGGTCAGCCATGA

Protein sequence

MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKILSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETRGLADRICWTGRDFDGDGILLVSLKVDRRLPSRESRIRVVFACFLTLWPLTNACNFTSPFSARRALLAFQNSKVKKGIYSHYDKFTELRAHQISSKGGLNENGRVRMAIQWSRGRGGEVKRLCSRCGIGVSPASAEKSRTNQKKKKEMKIKGYLLVIIFGGRSESPFDGGQP

Homology

[Close]

BLAST of CmaCh17G005060 vs. TrEMBL
Match: A0A0A0KCJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107890 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.2e-39
Identity = 104/164 (63.41%), Postives = 118/164 (71.95%), Query Frame = 1


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAA STSP PSC RL + T   PTPP+S   A +QP  TDA+N  PNNSSSIK FGHKI
Sbjct: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60

Query: 61  LSAAKSTNPKS-RSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGP 120
           LSA  S  PKS      K ES  E A+ISG DVLRALQKAAAVKEK RT+QVKE+KK   
Sbjct: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKK--- 120

Query: 121 PPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE 162
              EG+ +++  SEMN RVRPL+I  DWGLRLT+LEKRL EIS+
Sbjct: 121 -KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISD 160

[Close]

BLAST of CmaCh17G005060 vs. TrEMBL
Match: M5XRM4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012518mg PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.9e-07
Identity = 63/177 (35.59%), Postives = 89/177 (50.28%), Query Frame = 1


Query: 1   MWA-AFSTSPSPSCCRLPLPTRPLPTPPVS----AIYAKAQPPDTDADNATPNNSSSIKS 60
           MWA ++ + P+P C  L    R L  PP++    ++ AK+QPP  D           +  
Sbjct: 1   MWAVSYLSPPTPPCHPL---VRNLNRPPLNLKSLSVSAKSQPPGQD-----------LGG 60

Query: 61  FGHKILSAAKSTNPKSRSPIRKQESQLETAK--------ISGLDVLRALQKAAAVKEKNR 120
            GH IL+  KS N K  +PI  ++ Q +  K        ISG DVL ALQKAA  K +  
Sbjct: 61  LGHSILTKLKS-NHKPTTPILSKQKQKQKQKQNQEGKQMISGSDVLFALQKAADKKSREI 120

Query: 121 TRQVKEQKKDGPPPTEGSGSDNSEM----NRRVRPLRIKNDWGLRLTELEKRLQEIS 161
            ++ K+        +   GS   E     + +VRPL +K++WG RL ELEKR QE+S
Sbjct: 121 GKKKKKANVSSSSLSSYLGSHGEEEGVDEDGKVRPLCVKSEWGDRLDELEKRFQELS 162

[Close]

BLAST of CmaCh17G005060 vs. TrEMBL
Match: B9SVF7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0131360 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.2e-07
Identity = 48/106 (45.28%), Postives = 62/106 (58.49%), Query Frame = 1


Query: 66  STNPKSRSPIRKQESQLE------TAKISGLDVLRALQKAAAVKEKNRTRQVKE-QKKDG 125
           STN K R  ++KQ+ + +      T ++SG+DVL A+QKAAA  EKNRT   K  +K+DG
Sbjct: 44  STNKKQRQKLQKQDEEKQKERGAVTNQLSGIDVLWAMQKAAA--EKNRTSNSKRNRKRDG 103

Query: 126 PPPTEGSGSDNSEMNR----RVRPLRIKNDWGLRLTELEKRLQEIS 161
                G      E +      VRPL IK+DWG RL  LEKRL E+S
Sbjct: 104 LISASGQKEKEKEKDAVDYSNVRPLCIKSDWGPRLDRLEKRLNELS 147

[Close]

BLAST of CmaCh17G005060 vs. TAIR10
Match: AT2G46735.1 (AT2G46735.1 unknown protein)

HSP 1 Score: 55.1 bits (131), Expect = 9.8e-08
Identity = 54/152 (35.53%), Postives = 71/152 (46.71%), Query Frame = 1


Query: 26  PPVSAIYAKAQPPDTDADN---------ATPNNSSSIKSFGHKILSAAKSTNPKSRSPIR 85
           P V+   A +QPP  + D               S S+   G +IL     +NP  R PI 
Sbjct: 17  PTVATSVAYSQPPPHNYDGIHRRFINVPTKSQTSESVGGLGQQILLRTVDSNP--RKPIP 76

Query: 86  KQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGPPPTEGSGS------DNS 145
           K+       +ISG DVL A+Q+A A  ++ RT   K++ K+     E S S      DN 
Sbjct: 77  KE------TEISGSDVLWAIQRATA--QRKRTNAGKKKTKNRLSGVELSSSAGEPTGDNG 136

Query: 146 EMNRRVRPLRIKNDWGLRLTELEKRLQEISET 163
                V PLRIK+DWG RL E EK L+E   T
Sbjct: 137 VDYSNVTPLRIKSDWGHRLEEFEKLLKEFQNT 158

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: gi|659119605|ref|XP_008459744.1| (PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 6.3e-41
Identity = 106/164 (64.63%), Postives = 121/164 (73.78%), Query Frame = 1


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAA STSPSPS  RLP+ T P P  PVS  YAK+ PP  DA+N  PNNS +IKSFGHKI
Sbjct: 1   MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKI 60

Query: 61  LSAAKSTNPKS-RSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGP 120
           LSA  S  P+S      K ESQ E  +ISG DVLRALQKAAAVKEKNRT+QVKE+KK   
Sbjct: 61  LSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKAAAVKEKNRTQQVKEKKK--- 120

Query: 121 PPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE 162
              EG+ +++  SEMN RVRPL+IK DWGLRLT+LEKRL E+SE
Sbjct: 121 KKKEGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSE 161

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: gi|778712168|ref|XP_011656857.1| (PREDICTED: uncharacterized protein LOC105435778 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38
Identity = 104/164 (63.41%), Postives = 118/164 (71.95%), Query Frame = 1


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60
           MWAA STSP PSC RL + T   PTPP+S   A +QP  TDA+N  PNNSSSIK FGHKI
Sbjct: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60

Query: 61  LSAAKSTNPKS-RSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGP 120
           LSA  S  PKS      K ES  E A+ISG DVLRALQKAAAVKEK RT+QVKE+KK   
Sbjct: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKK--- 120

Query: 121 PPTEGSGSDN--SEMNRRVRPLRIKNDWGLRLTELEKRLQEISE 162
              EG+ +++  SEMN RVRPL+I  DWGLRLT+LEKRL EIS+
Sbjct: 121 -KKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISD 160

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: gi|1009142925|ref|XP_015888986.1| (PREDICTED: histone-lysine N-methyltransferase SETD1B-A-like [Ziziphus jujuba])

HSP 1 Score: 73.9 bits (180), Expect = 5.8e-10
Identity = 65/172 (37.79%), Postives = 91/172 (52.91%), Query Frame = 1


Query: 1   MWAA-FSTSPSPSCCRLPLPTRP---LPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSF 60
           MWAA   +SP P    +P PT+P   L  P V ++   +QPPD +       + ++I S 
Sbjct: 1   MWAASIGSSPGPCHSLIPKPTKPRRRLIGPLVLSVPVNSQPPDQNIQRLGRTSRTTIDS- 60

Query: 61  GHKILSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKK 120
                 + K TNP  +    ++E   E  +ISG DVL A+QKAAA K +    + K++KK
Sbjct: 61  ------STKPTNPIEKQDEGEEEE--EGRQISGSDVLWAMQKAAAHKNRVSGMKKKKKKK 120

Query: 121 DGPPPTEGSGSDNSEMN-----RRVRPLRIKNDWGLRLTELEKRLQEISETR 164
           +    ++GS S + E         VRPL I +DWG RL ELEK LQE+S  R
Sbjct: 121 NKMKKSKGSSSSHVEQEVAIDYSNVRPLSISSDWGGRLDELEKLLQELSSER 163

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: gi|658019473|ref|XP_008345091.1| (PREDICTED: protein SCARECROW 1-like [Malus domestica])

HSP 1 Score: 67.8 bits (164), Expect = 4.1e-08
Identity = 62/167 (37.13%), Postives = 85/167 (50.90%), Query Frame = 1


Query: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVS-AIYAKAQPPDTDADNATPNNSSSIKSFGHK 60
           MWA     P P     PL  +P PT P+  +I AK+QPP  D           +   G  
Sbjct: 1   MWAVSYPPPPPPS--QPLIPKPPPTYPIRLSIVAKSQPPSQD-----------LXGLGRS 60

Query: 61  ILSAAKSTNPKSRSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQVKEQKKDGP 120
           IL+  KS NP  +   ++++ + +   ISG DVL A+Q+AAA K     R+  ++KK  P
Sbjct: 61  ILTKLKS-NPNPKLQGKQKQDEEDKKVISGSDVLSAMQRAAAKK----NRESVKKKKKAP 120

Query: 121 PPTEGS--GSDNSEMN----RRVRPLRIKNDWGLRLTELEKRLQEIS 161
           P +  S  GS   E        VRPL +K++WG RL EL KRL E+S
Sbjct: 121 PSSSSSYAGSHREEEGVDEYGNVRPLCVKSEWGSRLDELGKRLXELS 149

[Close]

BLAST of CmaCh17G005060 vs. NCBI nr
Match: gi|596049264|ref|XP_007220476.1| (hypothetical protein PRUPE_ppa012518mg [Prunus persica])

HSP 1 Score: 65.1 bits (157), Expect = 2.7e-07
Identity = 63/177 (35.59%), Postives = 89/177 (50.28%), Query Frame = 1


Query: 1   MWA-AFSTSPSPSCCRLPLPTRPLPTPPVS----AIYAKAQPPDTDADNATPNNSSSIKS 60
           MWA ++ + P+P C  L    R L  PP++    ++ AK+QPP  D           +  
Sbjct: 1   MWAVSYLSPPTPPCHPL---VRNLNRPPLNLKSLSVSAKSQPPGQD-----------LGG 60

Query: 61  FGHKILSAAKSTNPKSRSPIRKQESQLETAK--------ISGLDVLRALQKAAAVKEKNR 120
            GH IL+  KS N K  +PI  ++ Q +  K        ISG DVL ALQKAA  K +  
Sbjct: 61  LGHSILTKLKS-NHKPTTPILSKQKQKQKQKQNQEGKQMISGSDVLFALQKAADKKSREI 120

Query: 121 TRQVKEQKKDGPPPTEGSGSDNSEM----NRRVRPLRIKNDWGLRLTELEKRLQEIS 161
            ++ K+        +   GS   E     + +VRPL +K++WG RL ELEKR QE+S
Sbjct: 121 GKKKKKANVSSSSLSSYLGSHGEEEGVDEDGKVRPLCVKSEWGDRLDELEKRFQELS 162

The following BLAST results are available for this feature:

BLAST of CmaCh17G005060 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh17G005060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCJ8_CUCSA	9.2e-39	63.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107890 PE=4 SV=1	[more]
M5XRM4_PRUPE	1.9e-07	35.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012518mg PE=4 SV=1	[more]
B9SVF7_RICCO	3.2e-07	45.28	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0131360 PE=4 SV=1	[more]

BLAST of CmaCh17G005060 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46735.1	9.8e-08	35.53	unknown protein	[more]

BLAST of CmaCh17G005060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119605\|ref\|XP_008459744.1\|	6.3e-41	64.63	PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo]	[more]
gi\|778712168\|ref\|XP_011656857.1\|	1.3e-38	63.41	PREDICTED: uncharacterized protein LOC105435778 [Cucumis sativus]	[more]
gi\|1009142925\|ref\|XP_015888986.1\|	5.8e-10	37.79	PREDICTED: histone-lysine N-methyltransferase SETD1B-A-like [Ziziphus jujuba]	[more]
gi\|658019473\|ref\|XP_008345091.1\|	4.1e-08	37.13	PREDICTED: protein SCARECROW 1-like [Malus domestica]	[more]
gi\|596049264\|ref\|XP_007220476.1\|	2.7e-07	35.59	hypothetical protein PRUPE_ppa012518mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005060.1	CmaCh17G005060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 142..162 scor
None	No IPR available	PANTHER	PTHR37728	FAMILY NOT NAMED	coord: 83..164 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G005060	Cucsa.120850	Cucumber (Gy14) v1	cgycmaB0295
CmaCh17G005060	Cla006695	Watermelon (97103) v1	cmawmB351
CmaCh17G005060	Csa6G107890	Cucumber (Chinese Long) v2	cmacuB379
CmaCh17G005060	MELO3C022252	Melon (DHL92) v3.5.1	cmameB313
CmaCh17G005060	ClCG06G002750	Watermelon (Charleston Gray)	cmawcgB328
CmaCh17G005060	CSPI06G08540	Wild cucumber (PI 183967)	cmacpiB383
CmaCh17G005060	CmoCh17G004770	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G005060	Lsi09G016500	Bottle gourd (USVL1VR-Ls)	cmalsiB331
CmaCh17G005060	Cp4.1LG12g04340	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G005060	MELO3C022252.2	Melon (DHL92) v3.6.1	cmamedB365
CmaCh17G005060	CsaV3_6G008920	Cucumber (Chinese Long) v3	cmacucB0451
CmaCh17G005060	Cla97C06G112110	Watermelon (97103) v2	cmawmbB377
CmaCh17G005060	CsGy6G008630	Cucumber (Gy14) v2	cgybcmaB763
CmaCh17G005060	Carg26678	Silver-seed gourd	carcmaB1239

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G005060	Wax gourd	cmawgoB0457
CmaCh17G005060	Bottle gourd (USVL1VR-Ls)	cmalsiB336