CSPI06G08540 (gene) Wild cucumber (PI 183967)

NameCSPI06G08540
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr6 : 7184675 .. 7186321 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTTATTGTTAAAATTTTTAACCATCTCATTTAGTCATTAGATAACTCCTAAAACTTTATCAAAATTTACACGTTTGAACTTGGAGCTTCTCTTTCCTTGGTTGTCTTCACTCCAAACTATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGATGATTCTTATTTGAATTGTCATTGATTTGTATATTCATATGTTGTGTTTTATGTAGATTTTAAGTCTCCGTGTGTTCAATTTTCAAGTAAAATGGCAAATCTTTCATATTTTTGGTACTTCACCTTGTTTTCACAACGTTCTGTAAATGATGGGCGATGGGCGTAGTAGTTAGTAAAGAAATGACATTACCAAAATTTGAATACAATACCTTACTACTAGAGTTAATAGTTCACTCATATTCGTTATGCCACTCCTCCATTTGGGATTCCTTCTGAGTTTTGTTCTCATTCTTGAACTAGATGAAACAAACCTCTTGTTTATAGTGGTTGATAGTTGTTTGTTTCTTGTTGTGCTTCGTGGTCAGAAATTAAAAGGGGATGGAGTTGTGTGAATTCGAAAGAATTATGAAGTTTTGAGTGTAAACTCGTATGATCAGGGTGGGAGTTGAGGCAAAATTTTGATTCTTTTTAGTTGTGGAGCTACGAACTCGGCCGAACAACTCTGCTCCCCCTTGTCCAGAACTCTATGCACTATGCTCTACCTAATAGATAGGGAGACTAAACTGATAGTCTCAGGGAGTTTTGAACTCCTAGGCTCACAACGTGTTAGGAGTTAAAAAGTATAAAATTGACAGTCCTTTAGTTGTCGAAGTTATGAACTCATAGGGCCAAACAAGAAGTTGAGAACTCCACTCCTTGCAACCGATAAGTGGCCAACCACATCATGTCAGTCCATCAAGGACTGAAGGAGAGCTATTGGAAGCTACCCAGGACTTGATTGTTTGTATCTACCTGTTACATTTGTCTAAAAGATAATAGAAAATTATAATAATGGACAAAAAAGAGCTGCAAGACTATAATACACGACAGAGTATTCTAAGAAGTGAGATTAGTTTCATAATCCATTAAGATTCAACCATATTGCCGTTGGTCCGGACCAGATGAATTGGCCACCGGAATTGGGTGAAGTTCATATCCTAGAGCTCTTGTTACATATTTCCGCGCTGTTATTGAGAACATATATCTTTGTTTACTT

mRNA sequence

ATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGA

Coding sequence (CDS)

ATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGA
BLAST of CSPI06G08540 vs. TrEMBL
Match: A0A0A0KCJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107890 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 7.3e-82
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1

Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI
Sbjct: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKKKKE 120
           LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKKKKE
Sbjct: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKKKKE 120

Query: 121 GAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
           GAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
Sbjct: 121 GAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 162

BLAST of CSPI06G08540 vs. TrEMBL
Match: M5XRM4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012518mg PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 8.3e-09
Identity = 67/180 (37.22%), Postives = 90/180 (50.00%), Query Frame = 1

Query: 1   MWAASSTSP-IPSCHRLTITTSRPPTPPLSV-FCAMSQPSGTDAENIKPNNSSSIKGFGH 60
           MWA S  SP  P CH L    +RPP    S+   A SQP G D           + G GH
Sbjct: 1   MWAVSYLSPPTPPCHPLVRNLNRPPLNLKSLSVSAKSQPPGQD-----------LGGLGH 60

Query: 61  KILSAVNS---PTPKSLNQTTPKHES--HPEAAQ-ISGSDVLRALQKAAAVKEKIRTQQV 120
            IL+ + S   PT   L++   K +   + E  Q ISGSDVL ALQKAA  K    ++++
Sbjct: 61  SILTKLKSNHKPTTPILSKQKQKQKQKQNQEGKQMISGSDVLFALQKAADKK----SREI 120

Query: 121 KEKKKKKE----------GAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
            +KKKK            G+  E+   + + +VRPL +  +WG RL +LEKR  E+S  V
Sbjct: 121 GKKKKKANVSSSSLSSYLGSHGEEEGVDEDGKVRPLCVKSEWGDRLDELEKRFQELSSKV 165

BLAST of CSPI06G08540 vs. TrEMBL
Match: A0A0K9QN52_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165630 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-07
Identity = 57/174 (32.76%), Postives = 77/174 (44.25%), Query Frame = 1

Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPN----------NS 60
           MW   ++ P        I T  PPTP LS F  + QP     +  + N          + 
Sbjct: 1   MWVTIASQPF-------IPTPIPPTPFLS-FPKLPQPPTKSVQLRRRNRYPAVVAATVSP 60

Query: 61  SSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQ 120
             I G G  + S + S      N +    +      +ISGSD+LRALQKA+A K   + Q
Sbjct: 61  HDIGGLGQAVFSTLESGPSAGSNPSKKVQQEEKSGKEISGSDILRALQKASAKKASTKKQ 120

Query: 121 QVKEK-----KKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEIS 160
           Q K+K     K++K G    D       +VRP+ +  DW  RL  LEKRL E S
Sbjct: 121 QQKKKGSIELKREKNGKKVVDYD-----KVRPITVKSDWATRLDDLEKRLQEFS 161

BLAST of CSPI06G08540 vs. TrEMBL
Match: A0A0L9TEX2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan635s006300 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.8e-06
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 1

Query: 57  GHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKK 116
           GH +L  + S        +TP  +   +  +ISGSDVL ALQ+A+A K+K R  + KE +
Sbjct: 42  GHTLLGVIRS-------NSTPIPKLAEQEGEISGSDVLWALQRASARKKKNRKNK-KEHR 101

Query: 117 KKKEGAATEDSQSEMNH-RVRPLKINRDWGLRLTQLEKRLLEISDPV 163
           + +   A+   QS  N+  +RPL IN +W  +L  L+KRL E+SD +
Sbjct: 102 RDESSVASLTEQSAANYTNIRPLSINANWAAKLEDLDKRLRELSDTI 140

BLAST of CSPI06G08540 vs. TrEMBL
Match: A0A0S3RI86_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G335700 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.8e-06
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 1

Query: 57  GHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKK 116
           GH +L  + S        +TP  +   +  +ISGSDVL ALQ+A+A K+K R  + KE +
Sbjct: 42  GHTLLGVIRS-------NSTPIPKLAEQEGEISGSDVLWALQRASARKKKNRKNK-KEHR 101

Query: 117 KKKEGAATEDSQSEMNH-RVRPLKINRDWGLRLTQLEKRLLEISDPV 163
           + +   A+   QS  N+  +RPL IN +W  +L  L+KRL E+SD +
Sbjct: 102 RDESSVASLTEQSAANYTNIRPLSINANWAAKLEDLDKRLRELSDTI 140

BLAST of CSPI06G08540 vs. NCBI nr
Match: gi|778712168|ref|XP_011656857.1| (PREDICTED: uncharacterized protein LOC105435778 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 1.1e-81
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1

Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI
Sbjct: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKKKKE 120
           LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKKKKE
Sbjct: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKKKKE 120

Query: 121 GAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
           GAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
Sbjct: 121 GAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 162

BLAST of CSPI06G08540 vs. NCBI nr
Match: gi|659119605|ref|XP_008459744.1| (PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 4.6e-61
Identity = 133/162 (82.10%), Postives = 140/162 (86.42%), Query Frame = 1

Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MWAASSTSP PS  RL ITT+ PP  P+S+F A S P   DAEN KPNNS +IK FGHKI
Sbjct: 1   MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKE-KKKKK 120
           LSAVNSPTP+SLNQTTPKHES PEA QISGSDVLRALQKAAAVKEK RTQQVKE KKKKK
Sbjct: 61  LSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKAAAVKEKNRTQQVKEKKKKKK 120

Query: 121 EGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDP 162
           EGAATEDS SEMNHRVRPLKI RDWGLRLTQLEKRLLE+S+P
Sbjct: 121 EGAATEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEP 162

BLAST of CSPI06G08540 vs. NCBI nr
Match: gi|645254492|ref|XP_008233064.1| (PREDICTED: uncharacterized protein LOC103332144 [Prunus mume])

HSP 1 Score: 69.7 bits (169), Expect = 5.3e-09
Identity = 65/178 (36.52%), Postives = 88/178 (49.44%), Query Frame = 1

Query: 1   MWAASSTSP-IPSCHRLTITTSRPPTPPLSV-FCAMSQPSGTDAENIKPNNSSSIKGFGH 60
           MWA S   P  P CH L    ++PP    S+   A SQP G D           + G GH
Sbjct: 1   MWAVSYLPPPTPPCHPLVRNLNKPPLNLKSLSVSAKSQPPGQD-----------LGGLGH 60

Query: 61  KILSAVNS---PTPKSLNQTTPKHESHPEAAQ-ISGSDVLRALQKAAAVKEKIRTQQVKE 120
            IL+ + S   PT   L++   K   + E  Q ISGSDVL ALQKAA  K    ++++ +
Sbjct: 61  SILTKLKSNHKPTTPILSKQKQKQRQNQEGKQMISGSDVLFALQKAADKK----SREIGK 120

Query: 121 KKKKKEGAATEDSQSEMNH----------RVRPLKINRDWGLRLTQLEKRLLEISDPV 163
           KKKK   +++  S    +H          +VRPL +  +WG RL +LEKR  E+S  V
Sbjct: 121 KKKKANVSSSSSSSYLGSHGEEEGVDEDVKVRPLCVKSEWGDRLDELEKRCQELSSKV 163

BLAST of CSPI06G08540 vs. NCBI nr
Match: gi|596049264|ref|XP_007220476.1| (hypothetical protein PRUPE_ppa012518mg [Prunus persica])

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-08
Identity = 67/180 (37.22%), Postives = 90/180 (50.00%), Query Frame = 1

Query: 1   MWAASSTSP-IPSCHRLTITTSRPPTPPLSV-FCAMSQPSGTDAENIKPNNSSSIKGFGH 60
           MWA S  SP  P CH L    +RPP    S+   A SQP G D           + G GH
Sbjct: 1   MWAVSYLSPPTPPCHPLVRNLNRPPLNLKSLSVSAKSQPPGQD-----------LGGLGH 60

Query: 61  KILSAVNS---PTPKSLNQTTPKHES--HPEAAQ-ISGSDVLRALQKAAAVKEKIRTQQV 120
            IL+ + S   PT   L++   K +   + E  Q ISGSDVL ALQKAA  K    ++++
Sbjct: 61  SILTKLKSNHKPTTPILSKQKQKQKQKQNQEGKQMISGSDVLFALQKAADKK----SREI 120

Query: 121 KEKKKKKE----------GAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
            +KKKK            G+  E+   + + +VRPL +  +WG RL +LEKR  E+S  V
Sbjct: 121 GKKKKKANVSSSSLSSYLGSHGEEEGVDEDGKVRPLCVKSEWGDRLDELEKRFQELSSKV 165

BLAST of CSPI06G08540 vs. NCBI nr
Match: gi|902172349|gb|KNA08108.1| (hypothetical protein SOVF_165630 [Spinacia oleracea])

HSP 1 Score: 62.8 bits (151), Expect = 6.5e-07
Identity = 57/174 (32.76%), Postives = 77/174 (44.25%), Query Frame = 1

Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPN----------NS 60
           MW   ++ P        I T  PPTP LS F  + QP     +  + N          + 
Sbjct: 1   MWVTIASQPF-------IPTPIPPTPFLS-FPKLPQPPTKSVQLRRRNRYPAVVAATVSP 60

Query: 61  SSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQ 120
             I G G  + S + S      N +    +      +ISGSD+LRALQKA+A K   + Q
Sbjct: 61  HDIGGLGQAVFSTLESGPSAGSNPSKKVQQEEKSGKEISGSDILRALQKASAKKASTKKQ 120

Query: 121 QVKEK-----KKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEIS 160
           Q K+K     K++K G    D       +VRP+ +  DW  RL  LEKRL E S
Sbjct: 121 QQKKKGSIELKREKNGKKVVDYD-----KVRPITVKSDWATRLDDLEKRLQEFS 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KCJ8_CUCSA7.3e-82100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107890 PE=4 SV=1[more]
M5XRM4_PRUPE8.3e-0937.22Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012518mg PE=4 SV=1[more]
A0A0K9QN52_SPIOL4.5e-0732.76Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165630 PE=4 SV=1[more]
A0A0L9TEX2_PHAAN3.8e-0638.32Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan635s006300 PE=4 SV=1[more]
A0A0S3RI86_PHAAN3.8e-0638.32Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G335700 PE=... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|778712168|ref|XP_011656857.1|1.1e-81100.00PREDICTED: uncharacterized protein LOC105435778 [Cucumis sativus][more]
gi|659119605|ref|XP_008459744.1|4.6e-6182.10PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo][more]
gi|645254492|ref|XP_008233064.1|5.3e-0936.52PREDICTED: uncharacterized protein LOC103332144 [Prunus mume][more]
gi|596049264|ref|XP_007220476.1|1.2e-0837.22hypothetical protein PRUPE_ppa012518mg [Prunus persica][more]
gi|902172349|gb|KNA08108.1|6.5e-0732.76hypothetical protein SOVF_165630 [Spinacia oleracea][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G08540.1CSPI06G08540.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37728FAMILY NOT NAMEDcoord: 74..162
score: 1.2
NoneNo IPR availablePANTHERPTHR37728:SF1SUBFAMILY NOT NAMEDcoord: 74..162
score: 1.2