Csa6G107890 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTACACGTTTGAACTTGGAGCTTCTCTTTCCTTGGTTGTCTTCACTCCAAACTATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGATGATTCTTATTTGAATTGTCATTGATTTGTATATTCATATGTTGTGTTTTATGTAGATTTTAAGTCTCCGTGTGTTCAATTTTCAAGTAAAATGGCAAATCTTTCATATTTTTGGTACTTCACCTTGTTTTCACAACGTTCTGTAAATGATGGGCGATGGGCGTAGTAGTTAGTAAAGAAATGACATTA ATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGA ATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGA MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV*
BLAST of Csa6G107890 vs. TrEMBL
Match: A0A0A0KCJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107890 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 4.9e-86 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1
BLAST of Csa6G107890 vs. TrEMBL
Match: M5XRM4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012518mg PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.1e-12 Identity = 67/180 (37.22%), Postives = 89/180 (49.44%), Query Frame = 1
BLAST of Csa6G107890 vs. TrEMBL
Match: A0A0K9QN52_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165630 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.0e-11 Identity = 57/174 (32.76%), Postives = 77/174 (44.25%), Query Frame = 1
BLAST of Csa6G107890 vs. TrEMBL
Match: A0A0S3RI86_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G335700 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-08 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 1
BLAST of Csa6G107890 vs. TrEMBL
Match: A0A0L9TEX2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan635s006300 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-08 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 1
BLAST of Csa6G107890 vs. TAIR10
Match: AT2G46735.1 (AT2G46735.1 unknown protein) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-08 Identity = 44/151 (29.14%), Postives = 66/151 (43.71%), Query Frame = 1
BLAST of Csa6G107890 vs. NCBI nr
Match: gi|778712168|ref|XP_011656857.1| (PREDICTED: uncharacterized protein LOC105435778 [Cucumis sativus]) HSP 1 Score: 325.1 bits (832), Expect = 7.0e-86 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1
BLAST of Csa6G107890 vs. NCBI nr
Match: gi|659119605|ref|XP_008459744.1| (PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo]) HSP 1 Score: 256.5 bits (654), Expect = 3.1e-65 Identity = 133/162 (82.10%), Postives = 140/162 (86.42%), Query Frame = 1
BLAST of Csa6G107890 vs. NCBI nr
Match: gi|645254492|ref|XP_008233064.1| (PREDICTED: uncharacterized protein LOC103332144 [Prunus mume]) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-12 Identity = 65/178 (36.52%), Postives = 87/178 (48.88%), Query Frame = 1
BLAST of Csa6G107890 vs. NCBI nr
Match: gi|596049264|ref|XP_007220476.1| (hypothetical protein PRUPE_ppa012518mg [Prunus persica]) HSP 1 Score: 80.5 bits (197), Expect = 3.0e-12 Identity = 67/180 (37.22%), Postives = 89/180 (49.44%), Query Frame = 1
BLAST of Csa6G107890 vs. NCBI nr
Match: gi|902172349|gb|KNA08108.1| (hypothetical protein SOVF_165630 [Spinacia oleracea]) HSP 1 Score: 76.3 bits (186), Expect = 5.7e-11 Identity = 57/174 (32.76%), Postives = 77/174 (44.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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