CsaV3_6G008920 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G008920
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Chaperone ClpB
Location	chr6 : 7167482 .. 7170541 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAAGAAGCCTTTTACCATTTAAGGCTGCCCTAGACAGGTAACTTTTTATAATATTTCTCAAATTCCACTTTGGTCATTATTATTATTATTTTTTTTAATTTGAAATAAAAATATTAAAAAGAGGAGGGAAACCACTTTCATTTTTTTTTGAATGCGTCAACCATCTTGGTTCTTCGAGCCTTCTTTCTTGGACAGTTTCTAGACTTCGTCAATTATCTTGATTGTGTCGTATCCTATCAACTATCTTGGTTGTGCCTTATCCTATCTTGTATGGTTTTTGGCAAGGACATCCTCATGTGTTGTTTATCCCTCTAATTTTCCTTCTTTCTTTCCTCTTGAATTGTTGCCCTGCCGTCCTGGGGCAGCCCACCAGTCACTCAAGACATTGACGCTTTTGCTAAGTATTACAATGAAAAAAATGCAATAACAGTGGCCATTGCGGCTGCAAAAATAATTCATCTCATTCACAGAACAATAAAATAATGCATCTCATGCACAAAACACTGTTCGTGCACATCTTCCACTTGCTGTAATCCTCTTGGTTATGTTGGCGTGTTGGGTACTCTTAGCTATTAATTCTTTTTTTTCAATTTGAATTTTAGTTGTATGGTGAGTGAATATAAAAATTGATTGAATATAAAAATAATGACATTGGTCGAAGAGTTTATAAATAAACGTATAATTCAAATATTAAGTGTATTTGTTTTTCTTAGTTGAAAATTGTTAGACATTTAAGAATATGTTAATTGTAATGGATGATCATTTAAAAAAAATTGCAAATATAGCAAAACTATCGCGGATTGACTTGTATCACTGATAAACTCGTATGATCTATCAGTGATAGACCAATTTTTACAACATGATCTATTAGTGATACACTCTATCATTGATAAAATTTGACAAATTTTGTTATATTTGTAAATTTTTTAAAATCTTGTTTTATATTTAATTATTTTAAATTTAATAGCTAAATTTTTTTGCAACTATGGGTGGACAATACTTTAAAATCCGTAAGTATAGTTAATCAAAGAATGGTTGGAGAATATATTGTTTTTTATTGTTAAAATTTTTAACCATCTCATTTAGTCATTAGATGACTCCTAAAACTTTATCAAAATTTACACGTTTGAACTTGGAGCTTCTCTTTCCTTGGTTGTCTTCACTCCAAACTATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGATGATTCTTATTTGAATTGTCATTGATTTGTATATTCATATGTTGTGTTTTATGTAGATTTTAAGTCTCCGTGTGTTCAATTTTCAAGTAAAATGGCAAATCTTTCATATTTTTGGTACTTCACCTTGTTTTCACAACGTTCTGTAAATGATGGGCGATGGGCGTAGTAGTTAGTAAAGAAATGACATTACCAAAATTTGAATACAATACCTTACTACTAGAGTTAATAGTTCACTCATATTCGTTATGCCACTCCTCCATTTGGGATTCCTTCTGAGTTTTGTTCTCATTCTTGAACTAGATGAAACAAACCTCTTGTTTATAGTGGTTGATAGTTGTTTGTTTCTTGTTGTGCTTCGTGGTCAGAAATTAAAAGGGGATGGAGTTGTGTGAATTCGAAAGAATTATGAAGTTTTGAGTGTAAACTCGTATGATCAGGGTGGGAGTTGAGGCAAAATTTTGATTCTTTTTAGTTGTGGAGCTACGAACTCGGCCGAACAACTCTGCTCCCCCTTGTCCAGAACTCTATGCACTATGCTCTACCTAATAGATAGGGAGACTAAACTGATAGTCTCAGGGAGTTTTGAACTCCTAGGCTCACAACGTGTTAGGAGTTAAAAAGTATAAAATTGACAGTCCTTTAGTTGTCGAAGTTATGAACTCATAGGGCCAAACAAGAAGTTGAGAACTCCACTCCTTGCAACGGATAAGTGGCCAACCACATCATGTCAGTCCATCAAGGACTGAAGGAGAGCTATTGGAAGCTACCCAGGACTTGATTGTTTGTATCTACCTGTTACATTTGTCTAAAAGATAATAGAAAATTATAATAATGGACAAAAAAGAGCTACAAGACTATAATACACGACAGAGTATTCTAAGAAGTGAGATTAGTTTCATAATCCATTAAGATTCAACCATATTGCCGTTGGTCCGGACCAGATGAATTGGCCACCGGAATTGGGTGAAGTTCATATCCTAGAGCTCTTGTTACATATTTCCGCGCTGTTATTGAGAACATATATCTTTGTTTACTTCTATGGCATCTCAGATTGAGTCTTCTAAATACGATCTTAAGTTTGTTGTATTGATCTGCATGACTCAGACTGAGCTTGCTATTGTAAATCTCACAATATTCTTTTATGAAATCAACAGATGATGCACATCTTAGATTTGGAGATTTGTTTAAATCTTTCTTGGTATGCTCAAAGAGAAACTGTTACTTTATAAGTTTATTTAAAAGATTATAAATTTAAACAAATCCTTGAACCCATTTTATGCCTGCAATAACGTGATTATGTTTCGGTGGAAGACTCTCCTCAACTTTTTTATTACTGTTTTTTAGCATGGTCTCCTCACTATTTGATAGCTTGTTCCCTACTGTTTTCATTTTCTTCT

mRNA sequence

ATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGA

Coding sequence (CDS)

ATGTGGGCTGCCTCTTCCACCTCACCCATCCCCTCCTGCCACCGCCTCACCATCACAACCAGTCGTCCGCCCACCCCTCCGTTATCAGTCTTCTGCGCAATGTCTCAGCCATCCGGAACGGATGCTGAAAACATCAAACCAAACAACAGTAGCAGCATCAAAGGCTTTGGCCACAAAATTCTCTCAGCAGTCAACTCCCCAACTCCCAAATCCCTAAACCAAACGACCCCCAAACACGAATCCCATCCGGAGGCTGCCCAAATTAGTGGGTCCGATGTTCTAAGGGCATTGCAGAAGGCGGCTGCCGTGAAGGAGAAGATCAGAACCCAACAAGTTAAAGAGAAGAAGAAGAAGAAAGAAGGGGCTGCCACCGAAGACAGTCAATCTGAGATGAATCATAGAGTGAGGCCTCTTAAGATCAACAGAGATTGGGGATTGAGGCTCACCCAATTGGAAAAACGCCTTCTGGAAATCTCTGACCCGGTTTGA

Protein sequence

MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKILSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVKEKKKKKEGAATEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV

Homology

[Close]

BLAST of CsaV3_6G008920 vs. NCBI nr
Match: XP_011656857.1 (PREDICTED: uncharacterized protein LOC105435778 [Cucumis sativus] >KGN46539.1 hypothetical protein Csa_6G107890 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 7.5e-76
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI
Sbjct: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXXXXXXXX 120
           LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXXXXXXXX
Sbjct: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXXXXXXXX 120

Query: 121 XXXTEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
           XXXTEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
Sbjct: 121 XXXTEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 162

[Close]

BLAST of CsaV3_6G008920 vs. NCBI nr
Match: XP_008459744.1 (PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo])

HSP 1 Score: 200.7 bits (509), Expect = 3.9e-48
Identity = 122/162 (75.31%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MWAASSTSP PS  RL ITT+ PP  P+S+F A S P   DAEN KPNNS +IK FGHKI
Sbjct: 1   MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAA-AVKEKIRTQQVXXXXXXX 120
           LSAVNSPTP+SLNQTTPKHES PEA QISGSDVLRALQKAA            XXXXXXX
Sbjct: 61  LSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKAAXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXTEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDP 162
           XXXX EDS SEMNHRVRPLKI RDWGLRLTQLEKRLLE+S+P
Sbjct: 121 XXXXXEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEP 162

[Close]

BLAST of CsaV3_6G008920 vs. NCBI nr
Match: XP_022959476.1 (uncharacterized protein LOC111460438 [Cucurbita moschata])

HSP 1 Score: 169.9 bits (429), Expect = 7.4e-39
Identity = 102/165 (61.82%), Postives = 111/165 (67.27%), Query Frame = 0


Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MW A STSP PSC RL + T  PPTPP+S   A +QP  TDA+N  PNNS+SIK FGHKI
Sbjct: 1   MWTAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSTSIKSFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXXXXXXXX 120
           LSA NS  PKS      K ES  E AQISG DVLRALQKAAAVKEK RT+Q         
Sbjct: 61  LSAANSTNPKS-RSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRTRQ-GKEQKKDG 120

Query: 121 XXXTEDS---QSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
              TE S    SEMN RVRPL+I  DWGLRLT+LEKRL EIS+ V
Sbjct: 121 PPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV 163

[Close]

BLAST of CsaV3_6G008920 vs. NCBI nr
Match: XP_023006674.1 (uncharacterized protein LOC111499329 [Cucurbita maxima])

HSP 1 Score: 167.2 bits (422), Expect = 4.8e-38
Identity = 102/165 (61.82%), Postives = 111/165 (67.27%), Query Frame = 0


Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MWAA STSP PSC RL + T   PTPP+S   A +QP  TDA+N  PNNSSSIK FGHKI
Sbjct: 1   MWAAFSTSPSPSCCRLPLPTRPLPTPPVSAIYAKAQPPDTDADNATPNNSSSIKSFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXXXXXXXX 120
           LSA  S  PKS      K ES  E A+ISG DVLRALQKAAAVKEK RT+QV        
Sbjct: 61  LSAAKSTNPKS-RSPIRKQESQLETAKISGLDVLRALQKAAAVKEKNRTRQV-KEQKKDG 120

Query: 121 XXXTEDS---QSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
              TE S    SEMN RVRPL+I  DWGLRLT+LEKRL EIS+ V
Sbjct: 121 PPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLTELEKRLQEISETV 163

[Close]

BLAST of CsaV3_6G008920 vs. NCBI nr
Match: XP_023547620.1 (uncharacterized protein LOC111806506 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.2 bits (417), Expect = 1.8e-37
Identity = 101/165 (61.21%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MWAA STSP PSC RL + T  PPTPP+S   A +QP  TDA+N  PNNSSSIK FGHKI
Sbjct: 1   MWAAFSTSPSPSCCRLPLPTRPPPTPPVSAIYAKAQPPETDADNATPNNSSSIKSFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXXXXXXXX 120
           LSA NS   KS      K ES  E AQISG DVLRALQKAAAVKEK R +Q         
Sbjct: 61  LSAANSTNSKS-RSPIRKQESQLETAQISGLDVLRALQKAAAVKEKNRIRQ-GREQKKDG 120

Query: 121 XXXTEDS---QSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
              TE S    SEMN RVRPL+I  DWGLRL +LEKRL EIS+ V
Sbjct: 121 PPPTEGSGSDNSEMNRRVRPLRIKNDWGLRLAELEKRLQEISETV 163

[Close]

BLAST of CsaV3_6G008920 vs. TrEMBL
Match: tr|A0A0A0KCJ8|A0A0A0KCJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107890 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 5.0e-76
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI
Sbjct: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXXXXXXXX 120
           LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXXXXXXXX
Sbjct: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXXXXXXXX 120

Query: 121 XXXTEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
           XXXTEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV
Sbjct: 121 XXXTEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 162

[Close]

BLAST of CsaV3_6G008920 vs. TrEMBL
Match: tr|A0A1S3CAW4|A0A1S3CAW4_CUCME (uncharacterized protein LOC103498786 OS=Cucumis melo OX=3656 GN=LOC103498786 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.6e-48
Identity = 122/162 (75.31%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHKI 60
           MWAASSTSP PS  RL ITT+ PP  P+S+F A S P   DAEN KPNNS +IK FGHKI
Sbjct: 1   MWAASSTSPSPSFRRLPITTTPPPAAPVSLFYAKSHPPKMDAENTKPNNSGTIKSFGHKI 60

Query: 61  LSAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAA-AVKEKIRTQQVXXXXXXX 120
           LSAVNSPTP+SLNQTTPKHES PEA QISGSDVLRALQKAA            XXXXXXX
Sbjct: 61  LSAVNSPTPQSLNQTTPKHESQPEAPQISGSDVLRALQKAAXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXTEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDP 162
           XXXX EDS SEMNHRVRPLKI RDWGLRLTQLEKRLLE+S+P
Sbjct: 121 XXXXXEDSYSEMNHRVRPLKIKRDWGLRLTQLEKRLLEMSEP 162

[Close]

BLAST of CsaV3_6G008920 vs. TrEMBL
Match: tr|A0A2N9FSE4|A0A2N9FSE4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17536 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-08
Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = 0


Query: 1   MWAAS-STSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNNSSSIKGFGHK 60
           MW+ S +T+PIP    L +T S    P           S +   +  PN    IK  GH 
Sbjct: 1   MWSLSPTTAPIPRPCLLPLTLSANSHP-------RRHQSKSPRNDAVPN--KDIKSLGHT 60

Query: 61  IL--SAVNSPTPKSLNQ-TTPKHESHPEAAQISGSDVLRALQKAAAVK-EKIRTQQVXXX 120
           IL  + +NS  P + N    P  + H +  QISGSDVLRALQ+AA  K E I+T+++   
Sbjct: 61  ILTVTTLNSNHPNTTNNPNKPIPKQHDQGRQISGSDVLRALQRAAVHKNEMIKTKKMMKK 120

Query: 121 XXXXXXXXTEDSQSEMN----HRVRPLKINRDWGLRLTQLEKRLLEISD 161
                   +  +  E +    ++VRPL I  +WG++L  LEKRL E+S+
Sbjct: 121 KNNKGVSSSVGAHREADGLDYNKVRPLCIKSEWGVKLDALEKRLQELSE 160

[Close]

BLAST of CsaV3_6G008920 vs. TrEMBL
Match: tr|A0A2P4HI40|A0A2P4HI40_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_45163 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.4e-08
Identity = 73/170 (42.94%), Postives = 89/170 (52.35%), Query Frame = 0


Query: 1   MWAASSTSPIPSCHRLTITTSRPPTPPLSVFCAMSQPSGTDAENIKPNN----SSSIKGF 60
           MWA S T  IPS    TI+ +  P P      A S P    ++   P N    +  IKG 
Sbjct: 1   MWALSQT--IPSLPHHTISPNLLPLP--LTISANSHPRRHQSK--PPRNDAVLTKDIKGL 60

Query: 61  GHKIL--SAVNSPTPKSLNQTTPKHESHPEAAQISGSDVLRALQKAAAVKEKIRTQQVXX 120
           GH IL  +AVNS TP   N    + +   E  QISGSDVLRALQ+A            XX
Sbjct: 61  GHTILEVTAVNSTTP---NPIPKQQKQEDEGRQISGSDVLRALQRAXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXTEDSQSEMN----HRVRPLKINRDWGLRLTQLEKRLLEISD 161
           XXXXXXXX    S  E +     +VRPL I  +WG+RL ++EKRL E+SD
Sbjct: 121 XXXXXXXXKGVSSSVEEDSLDYSKVRPLCIKSEWGVRLVEVEKRLQELSD 161

[Close]

BLAST of CsaV3_6G008920 vs. TrEMBL
Match: tr|M5XRM4|M5XRM4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G196100 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.4e-06
Identity = 60/176 (34.09%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 1   MWAASSTS-PIPSCHRLTITTSRPPTPPLSV-FCAMSQPSGTDAENIKPNNSSSIKGFGH 60
           MWA S  S P P CH L    +RPP    S+   A SQP G D           + G GH
Sbjct: 1   MWAVSYLSPPTPPCHPLVRNLNRPPLNLKSLSVSAKSQPPGQD-----------LGGLGH 60

Query: 61  KILSAVNS---PTPKSLNQ---TTPKHESHPEAAQISGSDVLRALQKAA------AVKEK 120
            IL+ + S   PT   L++                ISGSDVL ALQKAA        K+K
Sbjct: 61  SILTKLKSNHKPTTPILSKXXXXXXXXXXXXXKQMISGSDVLFALQKAADKKSREIGKKK 120

Query: 121 IRTQQVXXXXXXXXXXXTEDSQSEMNHRVRPLKINRDWGLRLTQLEKRLLEISDPV 163
            +                E+   + + +VRPL +  +WG RL +LEKR  E+S  V
Sbjct: 121 KKANVSSSSLSSYLGSHGEEEGVDEDGKVRPLCVKSEWGDRLDELEKRFQELSSKV 165

The following BLAST results are available for this feature:

BLAST of CsaV3_6G008920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656857.1	7.5e-76	100.00	PREDICTED: uncharacterized protein LOC105435778 [Cucumis sativus] >KGN46539.1 hy...	[more]
XP_008459744.1	3.9e-48	75.31	PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo]	[more]
XP_022959476.1	7.4e-39	61.82	uncharacterized protein LOC111460438 [Cucurbita moschata]	[more]
XP_023006674.1	4.8e-38	61.82	uncharacterized protein LOC111499329 [Cucurbita maxima]	[more]
XP_023547620.1	1.8e-37	61.21	uncharacterized protein LOC111806506 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G008920 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G008920 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G008920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCJ8\|A0A0A0KCJ8_CUCSA	5.0e-76	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107890 PE=4 SV=1	[more]
tr\|A0A1S3CAW4\|A0A1S3CAW4_CUCME	2.6e-48	75.31	uncharacterized protein LOC103498786 OS=Cucumis melo OX=3656 GN=LOC103498786 PE=...	[more]
tr\|A0A2N9FSE4\|A0A2N9FSE4_FAGSY	2.6e-08	35.50	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17536 PE=4 SV=1	[more]
tr\|A0A2P4HI40\|A0A2P4HI40_QUESU	4.4e-08	42.94	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_45163 PE=4 SV=1	[more]
tr\|M5XRM4\|M5XRM4_PRUPE	2.4e-06	34.09	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G196100 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G008920.1	CsaV3_6G008920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..135
None	No IPR available	PANTHER	PTHR37728	FAMILY NOT NAMED	coord: 1..160

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G008920	CSPI06G08540	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G008920	Cucsa.120850	Cucumber (Gy14) v1	cgycucB159
CsaV3_6G008920	CmaCh17G005060	Cucurbita maxima (Rimu)	cmacucB0451
CsaV3_6G008920	CmoCh17G004770	Cucurbita moschata (Rifu)	cmocucB0444
CsaV3_6G008920	Cp4.1LG12g04340	Cucurbita pepo (Zucchini)	cpecucB0176
CsaV3_6G008920	CsGy6G008630	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G008920	Carg26678	Silver-seed gourd	carcucB0938
CsaV3_6G008920	Cla006695	Watermelon (97103) v1	cucwmB570
CsaV3_6G008920	MELO3C022252	Melon (DHL92) v3.5.1	cucmeB446
CsaV3_6G008920	ClCG06G002750	Watermelon (Charleston Gray)	cucwcgB497
CsaV3_6G008920	Lsi09G016500	Bottle gourd (USVL1VR-Ls)	cuclsiB422
CsaV3_6G008920	MELO3C022252.2	Melon (DHL92) v3.6.1	cucmedB438
CsaV3_6G008920	Cla97C06G112110	Watermelon (97103) v2	cucwmbB487
CsaV3_6G008920	Bhi12G002003	Wax gourd	cucwgoB551

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G008920	Silver-seed gourd	carcucB0100
CsaV3_6G008920	Cucurbita moschata (Rifu)	cmocucB1065
CsaV3_6G008920	Bottle gourd (USVL1VR-Ls)	cuclsiB424
CsaV3_6G008920	Wax gourd	cucwgoB562