CmaCh16G003040 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G003040
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTubulin alpha chain
LocationCma_Chr16 : 1415689 .. 1420644 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTCTGCAAATTCTTAAATCAACCGTCTCTCCTCCTTCAATCTCTCAGCCGAAGTTTGGCTCTCAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACTCGGAGGTTTGTACTGCTCCATGGCCGTCGGAGGAGTTTGCGATATGGCTGCGTTCGTAGAAGGTTGAGTTTCCGTTGTGCTGCTCAGGATTCTGATAAGGAAAGCAACGGCAAGTTTTGACCGCTCTTCTTCTTCTTCTTCTTCTTTTGTTTCTGCTTCTGCTTTTTGGTGTCTTCTTTTTCTCATTTGTTTTTCTTTCTCAGCGCATTTTCTTGATGATTTGTTGTTCGTTGTTGTAGACCTCGTCTTGTAATATTGAAAGCGAGAGATAGAGAGGCAACTAGTTAACTGGCTTAGATGAGGCAATAGTTACTGATGTGGTTTTATTCCGATAGTCTGTCATTCTTAGTCCTAAACTATCTCTCTTTGTAGACAATCGTGTGAGAATCCATCCGGCTATTCGCCCGTCATTCCTGGTTTATCTCTCTCAATGTGTTTGCCTCGCTCGGATTTCTTCATGAATTCATGTTCGTCATCATTGACTTAAACGAGATAGAGAGACAGTATGCAGCCTAATCCTTCGATGATGCCGAAGTTGCATGGTGTAGTTTGCAGCTCAGTTGGTCCGTCGCTTCTGAATTATCTTCTTCTGTTGACAGTAGCTCAATCACGTCGCAAAATCGTGAGAGATGAGATTCATCCAGCTATTCGTTCCTCATTCCTTAATTCTCTTACTCAGTGCATTTGCCTTGTTCGGATGTCTTGATGAAATGATGTTCGTGTTTGTTAGTTATTTTCATAGCGAGAAATAGAGACGCAAATTCACCGAGAGAGATAATTCGGGAATGATGAACGAATATTTGGATGAAACTCGCATGATTTTACTCGTTGATTGTGCTGCAGTCAACAGAGTAAGATAGTAGATGTTCACTATCGTAGACATCTTCTTGCTTAAAAGAGGCAGAAGTTGTATGTTGTAGTTTGTTGTTGAGATGGTCCGTCATTCCTCGGTTATCTTACTCTGTAGAAAATCATGTAGCAAAATCGTGCAGTATCCATCAAGCTATTTGAGTAAATAAGGGATGGAAAATGCTTGCGGCTGCAAATGAAGATCACTTAGTTGGCCGTCCAATTCTTTTTAGAGCTCTATTCTTGAGTCAATATAGGCATATCCACGAAGATGAAATTAAATAGGAATTTGAAAATTTGTATTGGTCCAATTTTTATAGTCGAAGCTTTGAAGAAGCTACAAGTCTGTGTCAAGCCAACAGGAGTATTGGCTGGCCATGCTTGTTTAGATTGTTTGAACAGCTTTTGCATAGGGCCGATTTCTCCTTTAAGAAGAGTTTCGGATGTTTGAGTTTTCTTCAGCTTGTGTAACAATGGCGTGGTTAGCTTTGGCCCTCCAATATGAAGGCCCAGAACGCCTTCAAGCTTATTTTCCTAGCCAGTCGCTTTTGTATGCACCATCTTCCTACTACGTTCACATCTGGCCTTTCCTTTCTTGGTCCATTATAGAAGAACTTTTACTTATTAGAGCAGAGCTTTTAGCGTTCATCTGATTAGATGTTCCAACCAAGTTTGTATCTGCGTCACAGTTATCTCTAATAGTAGGTCTTAGTGGTAGGAATTTTCACATTCCTCATTAGGAACCTTAGGATTCTCTTTTCTTAACTATTTTCGTATACTTTGTTATGTGAGCCATACGTTCACATGCATATATTTTCTATAAATCAAGTCTGCCACAAGTAGCTTACTAGAAGGCTGTAATTTTTAGTTAGGGACTGATTAATCACCCTGTTGTAGGTTATGGAAAATGATGTTAGTTTTGAAGGATTCTGTGTGTTTTCCAAGGTTAGAGAAAGTTGCTTTAACTACACCCAAGAGTTAGATGCCAGGTACGATAGAAATCTTTTGTCGATCTTATTTGTCATCAAGTTGACCCACTATACTGTGACCTTCGATTATGTCCGCTGCTTCCCATCCTTCGTAGTCTGGATCAGTCTAACCATTATAATTAGTTTTCTCATTTAGTTTGAGAATAGTTGCAACACCTTCAGAAACCATCACTGACGTGTGTGTATGTAGTATATTACTTGAGTTGAACGTATTCAAGAATGTTTTTGTGTTTGATACCTTCGATTATGTTGATTTAAGTTACTTTACATTACTTTCTTCAGGTGAAGAACCTCCAGAATCATTGTTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCTACTTCCTTGCTCGAGGATACTAGCAACACTGACTTTGGACTTGGTGGCGAGATGAAGGGAGAAAACAGAGATTTTTCTCGCAGAAGTGCTGTTTCAACTGAAGTTGACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTGGAGTATATTGAATATGCTATTCGAATATTTAAATTCATATTATCTTTTCGTTACCATTTTCTATTGTTCCCATGCTTGACGAGTTATGACCAACATAACCAGAATTTGGTGAGCAGTCGAGGAAAATATTATTACTATCCCACCAAGAATATCGAAAGACTAGCCAGCCATACAAAACCGACGTCCAAATAAGGGATCTGTAAGAAAAAATTACAAAAATTAGCTCCAAACATTGAGAACCATCCAAAACAAATGGACGACCAAAACTTTTCTGAAGCAAAAGCCTAAAGGGAAGCATTACAGCGGGCCAAGCTTTAAAAATCCTCCCATGACCTCTCTGTCCTAGAAGTCCTCGTGCTTTCTACTAAATTCTCCAAATAACAACATAATCTGCCGGCGGAAAAATGTAGATTGTAAAAATGAAGCCACTCCCAAATGAAAGATTAGACAATATTTAGCATGGGTACAATAGATTTCCAGTGCTTCCTATATGTAGATTGTATTTTCTGATATCGATCTTGTACTGCAACATATCAGGCTATGGTTAATAGAGCAATAGTTGTGAAAGCTAGATTTTCAATGCCCAAACCACCCTCTTTTAGAACAACTCAACAAGATAAGGACCTTCCCCACACCCCCGCGAAAAAAGAAATGAAGTCATTGAGTTTAATGACCAGTGGTTCAAGCTTTGAAGATTTCAGTTAAGAGGAATCCCACTCAAAACCAACTAGATCAGAGTAAGTCTGCCACCCTCGGAGAGAACTTCTTCCATAATAACAGGTGGTTTTCCTCTTTGTAATATCTCTTCTAGCCCCAAATTTTAGCCTCGAGTATACAATCAATTAGGGTAGAGATATTAACTGAATGCATTCAACTATTTATGAAGGCTTAACATAGAACACGCTGAACCAACCTCTTCCATTAGACCGTTGATATAGTACCAAAATAAGGGAAGAAGAGTCTTCTCTTCCTGAAAAAGGCACCCTTCACCAACCTTCGCCAAAATGTGGAAGGCAATCTATCAACCAGGTAACAATTCCCAACTCCCAGAGTAAATCAGCAGCACCAAACTTTCCTTTCTCAAACACAAACTTTCCTTCATCCGTGATTCTCAATTAGAAAGACTTGCTTTCTATTGTAAAGCACCATCAAACATGAAGACAAATCAAAGAAGAAAGTACCAGATCCCTTTTCCAGATCCTAATTAGCAATTCGGTCATTCAACAATCTCCCGTTTTTTCTGTACTTATAGCAGGTTAACAGCATCATGTGCCTGCTATTCTCTCATACATCATTTGTCTTAGTAATTCGTATATGAAGTGTACTAGTAATTCTTTTAAAAGTCTAACTTCGACAAGCCAAAGCTCATAATTGGAACCAATGATACTGTTAATCTTAGCCAGCAGCATCAGTTTTGGAGTGGTCAATCAGTAGAGAAACACCAATATATCTGAGCGTAAGGTTTAATATAGAAGTCTGCAGTATTTGAGTTCTACATGCACTGGAACTATATTCTATTTTTCCAAACAAAGTCCTGGGAAAACTGAAGTTTCTTTCTAATTTCGTGCTGGAAGGAACAGAATAAACTTTATCGTGCATTTATGTTTTCTGAGTGATCCATTAGTTGGATCTTAATATTAGGTTGATATTATTGGCATAGGATTGCCCTAGTTGTGTCTATTTTGTCTTCTAACTCTTTTAACATTTACAAATTTAGTTCCTGCACTTTAATAATTTTTTATAATCGACAAATCTACTAAATGCAAAATTAAACTAAATTAAACTGTTTAGGATTCCCATGAGATAAATACAGATTGATTATATTCCATTCCCTTTCATTTCTATCATTTCAACTGCATGTCAGCTTTAATTCATTTCATTTGGTTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCGTCACTGTTTCGTTCTTTTTTGCTCTTTACTTTGTAAGGCTCCTTTCTCTTATATTTACTGCTCCAATTTCTGTTTGATATCCAAGTACTTAAGAGGAGGTCGAAACCAACATTTTTACTCTAATACTATTTTTATGCAGTTTCTTGGACCATCTTTTGTTCACGATGGCACCAAAACGCCAATATCACCTCCACCGTACGTTGATCCATATGCTCTTTTAGAAGACGAAAGAATTTCACAAATGGCTCCTCGTGTAAATTGACGGACGCATAATCTCCTAATTGGTTGGTTTTCTACTACTTTGTTTTCCCTTCCCAATGTTAATTGATGTTCCTTACTATTATTATTAATATATCTAAATGATTATTAGCTAGAATTTTCTGGTTTAATTTACGTTTTCTAGACTCATTCTCCTGCTGCTTTTTCTTTTTGGGCTAGGATTTACACATTTTAAAATGATTATTAGCTAAAAAATTTCTTTTTTATTCTTTTTTTAGTTTTGTGTTGCAGTTTTAA

mRNA sequence

ATGGCTGTTCTGCAAATTCTTAAATCAACCGTCTCTCCTCCTTCAATCTCTCAGCCGAAGTTTGGCTCTCAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACTCGGAGGTTTGTACTGCTCCATGGCCGTCGGAGGAGTTTGCGATATGGCTGCGTTCGTGAAGAACCTCCAGAATCATTGTTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCTACTTCCTTGCTCGAGGATACTAGCAACACTGACTTTGGACTTGGTGGCGAGATGAAGGGAGAAAACAGAGATTTTTCTCGCAGAAGTGCTGTTTCAACTGAAGTTGACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCGTCACTGTTTCGTTCTTTTTTGCTCTTTACTTTTTTCTTGGACCATCTTTTGTTCACGATGGCACCAAAACGCCAATATCACCTCCACCGTACGTTGATCCATATGCTCTTTTAGAAGACGAAAGAATTTCACAAATGGCTCCTCGTTTTTAA

Coding sequence (CDS)

ATGGCTGTTCTGCAAATTCTTAAATCAACCGTCTCTCCTCCTTCAATCTCTCAGCCGAAGTTTGGCTCTCAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACTCGGAGGTTTGTACTGCTCCATGGCCGTCGGAGGAGTTTGCGATATGGCTGCGTTCGTGAAGAACCTCCAGAATCATTGTTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCTACTTCCTTGCTCGAGGATACTAGCAACACTGACTTTGGACTTGGTGGCGAGATGAAGGGAGAAAACAGAGATTTTTCTCGCAGAAGTGCTGTTTCAACTGAAGTTGACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCGTCACTGTTTCGTTCTTTTTTGCTCTTTACTTTTTTCTTGGACCATCTTTTGTTCACGATGGCACCAAAACGCCAATATCACCTCCACCGTACGTTGATCCATATGCTCTTTTAGAAGACGAAAGAATTTCACAAATGGCTCCTCGTTTTTAA

Protein sequence

MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVREEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRF
Homology
[Close]
BLAST of CmaCh16G003040 vs. TrEMBL
Match: A0A0A0KY14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000570 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.1e-82
Identity = 169/219 (77.17%), Postives = 183/219 (83.56%), Query Frame = 1 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVR------ 60
           MA LQILKS++S PSIS   FGSQS+RF S+ DS    +LLHGRRRSLRY CV       
Sbjct: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDS----LLLHGRRRSLRYACVYRRFTFR 60

Query: 61  ------------EEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
                       EEPPESLFMKELKKRGITPTSLLEDT+++DF LGGEM GENRDFSRRS
Sbjct: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF L
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAP 202
           YFFLG SF+HDG +TPISPPPYVDPYALLEDERISQ+AP
Sbjct: 181 YFFLGASFIHDG-QTPISPPPYVDPYALLEDERISQIAP 214

[Close]
BLAST of CmaCh16G003040 vs. TrEMBL
Match: E5GBH6_CUCME (Tubulin alpha chain OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.5e-63
Identity = 127/139 (91.37%), Postives = 134/139 (96.40%), Query Frame = 1 

Query: 63  MKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQL 122
           MKELKKRGITPTSLLEDT+N+DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQL
Sbjct: 1   MKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQL 60

Query: 123 NSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPP 182
           NSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Sbjct: 61  NSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP 120

Query: 183 PYVDPYALLEDERISQMAP 202
           PYVDPYALLEDERISQ+AP
Sbjct: 121 PYVDPYALLEDERISQIAP 138

[Close]
BLAST of CmaCh16G003040 vs. TrEMBL
Match: W9RN54_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003356 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.0e-62
Identity = 136/220 (61.82%), Postives = 164/220 (74.55%), Query Frame = 1 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGR--------RRSLRYGC 60
           MA +Q LK   SP S+S+P F      FFSE  S R+ V+  G          + LR  C
Sbjct: 1   MASVQFLKYNPSPVSVSRPNFPGNPRWFFSE-SSLRKRVVRFGSSGGSRNYTNKRLRLFC 60

Query: 61  VR---------EEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEM-KGENRDFSRRS 120
                      EEPPESLFMKEL++RG+TPTSL EDT+ +D+GL  E  + E R FS+R+
Sbjct: 61  AAQDPEKESNGEEPPESLFMKELRRRGMTPTSLREDTNTSDYGLNDETTRKEGRAFSQRN 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEV+KSLS+QRERSM+LNSEGLEGLIPRA+LLLTIGGTFFLGFWPLI++TV+FF AL
Sbjct: 121 AVSTEVEKSLSDQRERSMKLNSEGLEGLIPRARLLLTIGGTFFLGFWPLILITVAFFSAL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPR 203
           YF+ GP+FVHD +K PISPPPY+DPYALLE+ERISQ+APR
Sbjct: 181 YFYFGPAFVHDASKMPISPPPYIDPYALLEEERISQIAPR 219

[Close]
BLAST of CmaCh16G003040 vs. TrEMBL
Match: M5VKJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011181mg PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-60
Identity = 129/218 (59.17%), Postives = 159/218 (72.94%), Query Frame = 1 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRR-------RSLRYGCV 60
           MA LQ+LKS++SP  +S   F  +SS  FS + S +  + L   R       R LR  C 
Sbjct: 1   MASLQMLKSSLSPMPVSHSNFQGKSSWVFSGIQSRKSSIRLSSYRGSGYYLRRRLRVCCK 60

Query: 61  R---------EEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRSAV 120
                     EEPPESLFMKEL++RG+TPTSLLE+    ++G   EM  E+R FS R+AV
Sbjct: 61  AQEGDNKSNGEEPPESLFMKELRRRGMTPTSLLEEKERIEYGANDEMGKEDRGFSTRNAV 120

Query: 121 STEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYF 180
           STE++KSL+NQRERSMQLNSEGLEGLIPRA+LLLTIGGTFFLGFWPLI++TV+ F ALY 
Sbjct: 121 STEIEKSLANQRERSMQLNSEGLEGLIPRARLLLTIGGTFFLGFWPLILITVALFSALYL 180

Query: 181 FLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPR 203
           + G +F+HDG+ +PISPP Y+DPY LLEDERISQ+APR
Sbjct: 181 YFGSTFIHDGSSSPISPPQYIDPYELLEDERISQIAPR 218

[Close]
BLAST of CmaCh16G003040 vs. TrEMBL
Match: D7T3P1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00400 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.4e-59
Identity = 136/214 (63.55%), Postives = 159/214 (74.30%), Query Frame = 1 

Query: 1   MAVLQILKSTVSPP-SISQPKFGSQSSRFFSELDSTRRFV-LLHGRRRSLRYGCV----- 60
           MA LQILKS+  PP  ISQ K   +S+  FSE DS +R        RR LR  C      
Sbjct: 1   MASLQILKSSTFPPLPISQSKISRKSTCLFSEFDSRKRIRNSAFFTRRRLRVCCGVQEGD 60

Query: 61  ----REEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMK-GENRDFSRRSAVSTEV 120
                EEPPESLFMKELK+RG+TPTSLLED+    +GL  E+K  E+  FS+R+A ST+ 
Sbjct: 61  NQSNGEEPPESLFMKELKRRGMTPTSLLEDSKRGAYGLEEEIKLEEDIGFSKRNAYSTDF 120

Query: 121 DKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYFFLGP 180
           + +LSNQRERSM LNSEGLEGLIPRAKLLLTIGGTFFLGF PLI++TV+FF ALYF+ GP
Sbjct: 121 EANLSNQRERSMALNSEGLEGLIPRAKLLLTIGGTFFLGFGPLILITVAFFCALYFYFGP 180

Query: 181 SFVHDGTKTPISPPPYVDPYALLEDERISQMAPR 203
           +FVHDG+KTPI PP Y+DPY LLEDERISQ+APR
Sbjct: 181 TFVHDGSKTPIMPPQYIDPYELLEDERISQIAPR 214

[Close]
BLAST of CmaCh16G003040 vs. TAIR10
Match: AT1G50020.1 (AT1G50020.1 unknown protein)

HSP 1 Score: 189.9 bits (481), Expect = 1.6e-48
Identity = 99/149 (66.44%), Postives = 119/149 (79.87%), Query Frame = 1 

Query: 55  EEPPESLFMKELKKRGITPTSLLEDTS-NTDFGLGGEMKGENRDFSRRSAVSTEVDKSLS 114
           EEPPESLFMKELK+RG+TPTSLL+D   + D    G+  G +   S+ +A +   DKSL 
Sbjct: 62  EEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGNS---SKTTATTPAFDKSLL 121

Query: 115 NQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYFFLGPSFVHD 174
           NQRERS+ LNSEGLEGLIPRA++LLTIGGTFFLGFWPLIV+T+  F ALY + G  F+HD
Sbjct: 122 NQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIHD 181

Query: 175 GTKTPISPPPYVDPYALLEDERISQMAPR 203
           G++TP+SPPPY+DPYALLEDERIS M PR
Sbjct: 182 GSRTPVSPPPYIDPYALLEDERISGMDPR 207

[Close]
BLAST of CmaCh16G003040 vs. NCBI nr
Match: gi|659108855|ref|XP_008454422.1| (PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 1.7e-84
Identity = 173/219 (79.00%), Postives = 184/219 (84.02%), Query Frame = 1 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCV------- 60
           MA LQILKST+S PSIS P FGSQS+RFFS+ DS    +LLHGRRRSLR  CV       
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFR 60

Query: 61  -----------REEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
                       EEPPESLFMKELKKRGITPTSLLEDT+N+DFGLGGEM GENRDFSRRS
Sbjct: 61  CAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF L
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAP 202
           YFF G SF+HDG KTPISPPPYVDPYALLEDERISQ+AP
Sbjct: 181 YFFFGSSFIHDG-KTPISPPPYVDPYALLEDERISQIAP 214

[Close]
BLAST of CmaCh16G003040 vs. NCBI nr
Match: gi|449465109|ref|XP_004150271.1| (PREDICTED: uncharacterized protein LOC101221726 [Cucumis sativus])

HSP 1 Score: 312.4 bits (799), Expect = 5.9e-82
Identity = 169/219 (77.17%), Postives = 183/219 (83.56%), Query Frame = 1 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVR------ 60
           MA LQILKS++S PSIS   FGSQS+RF S+ DS    +LLHGRRRSLRY CV       
Sbjct: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDS----LLLHGRRRSLRYACVYRRFTFR 60

Query: 61  ------------EEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRS 120
                       EEPPESLFMKELKKRGITPTSLLEDT+++DF LGGEM GENRDFSRRS
Sbjct: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF L
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAP 202
           YFFLG SF+HDG +TPISPPPYVDPYALLEDERISQ+AP
Sbjct: 181 YFFLGASFIHDG-QTPISPPPYVDPYALLEDERISQIAP 214

[Close]
BLAST of CmaCh16G003040 vs. NCBI nr
Match: gi|307135958|gb|ADN33818.1| (tubulin alpha chain [Cucumis melo subsp. melo])

HSP 1 Score: 250.0 bits (637), Expect = 3.6e-63
Identity = 127/139 (91.37%), Postives = 134/139 (96.40%), Query Frame = 1 

Query: 63  MKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQL 122
           MKELKKRGITPTSLLEDT+N+DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQL
Sbjct: 1   MKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQL 60

Query: 123 NSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPP 182
           NSEGLEGLIPRAKLLLTIGGTFFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPP
Sbjct: 61  NSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP 120

Query: 183 PYVDPYALLEDERISQMAP 202
           PYVDPYALLEDERISQ+AP
Sbjct: 121 PYVDPYALLEDERISQIAP 138

[Close]
BLAST of CmaCh16G003040 vs. NCBI nr
Match: gi|703096134|ref|XP_010095744.1| (hypothetical protein L484_003356 [Morus notabilis])

HSP 1 Score: 245.0 bits (624), Expect = 1.2e-61
Identity = 136/220 (61.82%), Postives = 164/220 (74.55%), Query Frame = 1 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGR--------RRSLRYGC 60
           MA +Q LK   SP S+S+P F      FFSE  S R+ V+  G          + LR  C
Sbjct: 1   MASVQFLKYNPSPVSVSRPNFPGNPRWFFSE-SSLRKRVVRFGSSGGSRNYTNKRLRLFC 60

Query: 61  VR---------EEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEM-KGENRDFSRRS 120
                      EEPPESLFMKEL++RG+TPTSL EDT+ +D+GL  E  + E R FS+R+
Sbjct: 61  AAQDPEKESNGEEPPESLFMKELRRRGMTPTSLREDTNTSDYGLNDETTRKEGRAFSQRN 120

Query: 121 AVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFAL 180
           AVSTEV+KSLS+QRERSM+LNSEGLEGLIPRA+LLLTIGGTFFLGFWPLI++TV+FF AL
Sbjct: 121 AVSTEVEKSLSDQRERSMKLNSEGLEGLIPRARLLLTIGGTFFLGFWPLILITVAFFSAL 180

Query: 181 YFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPR 203
           YF+ GP+FVHD +K PISPPPY+DPYALLE+ERISQ+APR
Sbjct: 181 YFYFGPAFVHDASKMPISPPPYIDPYALLEEERISQIAPR 219

[Close]
BLAST of CmaCh16G003040 vs. NCBI nr
Match: gi|645261348|ref|XP_008236251.1| (PREDICTED: uncharacterized protein LOC103335037 [Prunus mume])

HSP 1 Score: 244.2 bits (622), Expect = 2.0e-61
Identity = 131/218 (60.09%), Postives = 161/218 (73.85%), Query Frame = 1 

Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGR-------RRSLRYGCV 60
           MA LQ+LKS++SP  +SQ  F  +SS  FS + S + F+ L          RR LR  C 
Sbjct: 1   MASLQMLKSSLSPMPVSQSNFPGKSSWVFSGIQSRKSFIRLSSYSGSGYYLRRRLRVCCK 60

Query: 61  R---------EEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRSAV 120
                     EEPPESLFMKEL++RG+TPTSLLE+    ++G   EM  E+R FS R+AV
Sbjct: 61  AQEGDNKSNGEEPPESLFMKELRRRGMTPTSLLEEKERIEYGANDEMGKEDRGFSTRNAV 120

Query: 121 STEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYF 180
           STE++KSL+NQRERSMQLNSEGLEGLIPRA+LLLTIGGTFFLGFWPLI++TV+ F ALY 
Sbjct: 121 STEIEKSLANQRERSMQLNSEGLEGLIPRARLLLTIGGTFFLGFWPLILITVALFSALYL 180

Query: 181 FLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPR 203
           + G +F+HDG+ +PISPP Y+DPY LLEDERISQ+APR
Sbjct: 181 YFGSTFIHDGSSSPISPPQYIDPYELLEDERISQIAPR 218

The following BLAST results are available for this feature:
BLAST of CmaCh16G003040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh16G003040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY14_CUCSA4.1e-8277.17Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000570 PE=4 SV=1[more]
E5GBH6_CUCME2.5e-6391.37Tubulin alpha chain OS=Cucumis melo subsp. melo PE=4 SV=1[more]
W9RN54_9ROSA8.0e-6261.82Uncharacterized protein OS=Morus notabilis GN=L484_003356 PE=4 SV=1[more]
M5VKJ8_PRUPE4.4e-6059.17Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011181mg PE=4 SV=1[more]
D7T3P1_VITVI6.4e-5963.55Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00400 PE=4 SV=... [more]
BLAST of CmaCh16G003040 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G50020.11.6e-4866.44 unknown protein[more]
BLAST of CmaCh16G003040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108855|ref|XP_008454422.1|1.7e-8479.00PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo][more]
gi|449465109|ref|XP_004150271.1|5.9e-8277.17PREDICTED: uncharacterized protein LOC101221726 [Cucumis sativus][more]
gi|307135958|gb|ADN33818.1|3.6e-6391.37tubulin alpha chain [Cucumis melo subsp. melo][more]
gi|703096134|ref|XP_010095744.1|1.2e-6161.82hypothetical protein L484_003356 [Morus notabilis][more]
gi|645261348|ref|XP_008236251.1|2.0e-6160.09PREDICTED: uncharacterized protein LOC103335037 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0032259 methylation
cellular_component GO:0009507 chloroplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008168 methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G003040.1CmaCh16G003040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35699FAMILY NOT NAMEDcoord: 55..203
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G003040Cucsa.298520Cucumber (Gy14) v1cgycmaB0824
CmaCh16G003040Cla006458Watermelon (97103) v1cmawmB293
CmaCh16G003040Csa4G000570Cucumber (Chinese Long) v2cmacuB333
CmaCh16G003040MELO3C018026Melon (DHL92) v3.5.1cmameB303
CmaCh16G003040ClCG10G010000Watermelon (Charleston Gray)cmawcgB280
CmaCh16G003040CSPI04G00080Wild cucumber (PI 183967)cmacpiB338
CmaCh16G003040CmoCh04G004610Cucurbita moschata (Rifu)cmacmoB338
CmaCh16G003040CmoCh16G003220Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G003040Lsi03G010050Bottle gourd (USVL1VR-Ls)cmalsiB307
CmaCh16G003040Cp4.1LG14g04600Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G003040Cp4.1LG01g02810Cucurbita pepo (Zucchini)cmacpeB351
CmaCh16G003040MELO3C018026.2Melon (DHL92) v3.6.1cmamedB354
CmaCh16G003040CsaV3_4G000050Cucumber (Chinese Long) v3cmacucB0388
CmaCh16G003040Cla97C10G193020Watermelon (97103) v2cmawmbB332
CmaCh16G003040Bhi11G000911Wax gourdcmawgoB0410
CmaCh16G003040CsGy4G000090Cucumber (Gy14) v2cgybcmaB494
CmaCh16G003040Carg08104Silver-seed gourdcarcmaB0526
CmaCh16G003040Carg19701Silver-seed gourdcarcmaB0406
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G003040CmaCh04G004300Cucurbita maxima (Rimu)cmacmaB351
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G003040Cucurbita maxima (Rimu)cmacmaB135
CmaCh16G003040Cucumber (Gy14) v1cgycmaB0623
CmaCh16G003040Cucurbita moschata (Rifu)cmacmoB318
CmaCh16G003040Cucumber (Chinese Long) v2cmacuB348
CmaCh16G003040Melon (DHL92) v3.6.1cmamedB331
CmaCh16G003040Cucumber (Chinese Long) v3cmacucB0414