Carg19701 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19701
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tubulin alpha-6 chain
Location	Cucurbita_argyrosperma_scaffold_133 : 231147 .. 236704 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTCTGCAAATTCTTAAATCAACTGTCTCTCCTCCTTCAATTTCTCAGCCGAAGTTTGGCTCTCAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACTAGGAGGTTTACACTGCTCCATGGCCGTCGGAGGAGTTTGCGATATGGCTGCGTTCGTAGAAGGTTGAGTTTCCGCTGTGCTGCTCAGGATTCTGATAAGGAAAGCAACGGCAAGTTTTGACCGCTCTTCTTCTTCTTCTTCTTCTTTTGTTTCTGCTTCTGCTTTTTGCGGTCTTCTTTTTCTCATTTGTTTTTCTTTCTCAGCGCATTTTCTTGATGATTTGTTGTTCGTTGTTGTAGACTTCGTCTTGTTATATTGAAAGCGAGAGATAGAGAGGCAACTAGTTAACTGGCTTAGATGAGGCAATAGTTACTGATGTGGTTTTATTCCGATAGTCTGTCATTCTTAGTCCTATACTATCTCTCTTTGTAGACAATCGTGTGAGAATCCATCCGGCTATTCGTCCGTCATTCCTGGTTTATCTCTCTCAATGTGTTTGTCTCGCTCGGATTTCTTCATGAATTCATGTTCGTCATCATTGACTTAAGCGAGATAGAGACGGTATGCAGCTTAATCCTTCGATGAGGCCGAAGTTGCATGGTGTAGTTTGCAGCTCAGTTGGTCCGTCGCTTCTGAATTATCTTCTTCTGTTGACAGTAGCTCAATCACATCGCAAAATCGTGAGAGATGAGATTCATCCAGCTATTCGTTCCTCATTCCTTAATTCTCCTACTCAGTGCATTTGCCTCGTTCGGATGTCTTGATGAAATGATGTTCGTGTTTGTTAGTTATTTTCATAGCGAGAAATAATGACGCAAATGCACAGAGAGAGATAATTCGGGAATGATGAACGAATATTTGGATGAAACTCGCATGATTTTACTCGTTGATTGTGCTGCAGTCAACAGAGTAAGATAGTAGATGTTCACTATCGTAGACATCTTCTTGCTTAAGATAGGCAGAAGTTGTATGTTGTAGTTTGTTGTTGAGATGGTCCGTCATTCCTCAGTTATCTTGCTCTGTAGAAAGTAGCGCAATCCTGTAGCAAAATTGTGCAATATCCATCAAGCTATTTGAGTAAACGAGTGATGGAAAATGGTTGCGGCTGCAAATGAAGATCACTTAGTTGGCCGTCCAATTCTTTTTAGAGCTTTATTCTTGAGTCAATATAGGCATGGCCACGAAGATGAAATTAAATAGGAATTTGGAAATTTGTATTGGTCCAATTTTTATAGTCGAAGCTTTGAAGAAGCTATAAGTCTGTGCCAAGCCAACAGGAGTATTAGCTGGCCATGCTTGTTTAGATTGTTTAGGGCAGATTCTCCTTTAAGAAGCGTTTACATTTCGGATGTTTGAGTTTTCTTCAGCTTGTGTAACAATGGCGTGGTTAGCTTTGGCCCTCCAATATGAAGGCTGAGAACGCCTTCAAGCTTATTTTCCTAGCCAGTCGCTTTTGTATGCATCATCTTCCTACTACGTTCACATCTGGCCTTTCCTTGATCCATTATAGAAGAACTTTTACTTATTAGAGCAAAGCTTTTAGCGTTCATCTGATTAGATGTTCCAACCAAGTTTGTATCTGCGTCACAGTTATCTCTAATAATAGGTCTTAGTGGTAGGAATTTTCACATTCCTCATTAGGAACCTTAGGATTCTCTTTTCTTAACTATTTTCGTATACTTTGTTATGTAAGCCATACGTTCACATGCATATATTTTCTATAAATCAAGTCTGCCACAAGTAGCTTACTAGAAGGCTGTAATTTTTAGTTAGGGACTGGTTAATCACCCTGTTGTAGGTTATGGAAAATGATTTTAGTTTTGAAGGATTCTGTGTGTTTTCCAAGGTTAGAGAAAGTTGCTTTAACTACACCCAAGATCTCCATAGATGCCAGGTACGATAGAAATCTTTTGTCGATCTTATTTGTCATCAAGTTGACCAACCATACTGTGACCTTATTATTCACTGCTTCCCATCCTTCGTAGTTTGGATCAGTCTAACCATTGTAATTAGTTTTCTCCTTTAGTTTGAGAATAGTTGCAACACCTTCAGAAACCATCACTGACGTGTGTGTGTGTAGTACATTACTTGAGTTGAACGTATTCAAGAATGTTTTTGTGTTTGATACCTTCGATTATGTCGATTTAAGTTACTTTACATTACTTTCTTCAGGTGAAGAACCTCCAGAATCATTGTTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCTACTTCCTTGCTTGAGGATACTAGCAACACTGACTTTGGACTTGGTGGCGAGATGAAGGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTGACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTGTGATTTTATTGGAGTATATTGAATATGCTATTCGAATATTTAAATTCATGTTATCTTTTCGTTATCATTTTCTATTGTTCCCATGCTTGACGAGTTATGACCAACATAACCAGAATTTGGTGAGCAGTCGAGGAAAATATTAGTACTATCCCACCAAGAATATCGAAAGACTGGCCAGCCATACCAAAACCGAAGTTCAAATAAGGGATCTGTAAGAAAGAATTACAAAAATTAGCTCCAAACGTTGAGAACCATCCAAAACAAATGGACGACCAAAACTTTTCTGAAGCAAAAGCCTAAAGGGAAGCATTACAGCGGGCCAAGCTTTAGAAATTCTCCCATGACCTCTCTGTCCTAGAAGTCTTTGTGCTTTCTACTAAATACTCCAAATAACAACAACATAATCTGCCGGCAGAAAAACCATGTCGTTGTTACGAAATGGTAGATGAAAAATAATCTCCTCCACACATCACTAAGTAGGTAATCGGAAATGAAAAGCATGCTCCAGGTGACCGAAAATCTTCTTCCAAAATCTTCCCAGAAAACATGCATTCGAAGTAGCTCTTCGGATGAACTTACATGCAAAGATCACACCATTGAAATCAAACCACCGAGGACAATTTTAAATAAATCATGATATTGATTCTCCCACAACCGGCAAAGAGAAGAGTAGAATTTAACCTTCTTCAGAAGCAAGTCCTTCCTAGTTTAGCAAAAATAAATAAATAAATAAAAAACCCAAACACTTGTATCCTAGTGATTAATAGATAAATACAAAACCCCGGTCGATGTTAAGCTCTGTTAAATTAAGTTTTCTTGAAAGTGAAGTTAATGGGACTAAACTGCCCAAAAGAAGAAAAGAAATCAATTGAGGAAATTTCTTTGAAGAGGGAGATTATAGAGAGGGAAAATAGACTTTAAAAGACCACCTTCAACTGAATGGCCTTCCTAAATAATAATGAAGCCACTCTCAAATGAAAGATTAAACAATATTTAGCATGGGTACAACGAAATAGATTTTGAGCGCTTCCTAAATGTAGATTGTATTTTCTGATATCGATCTTGTACTGCAACATATCAGGCTTTGGTTAATAGAGCAATAGTTGTGAAAGCTAGATTTTCAATGCCCAAACCACCCTCTTTTAGAACAACTCAACAAGATAAGGACCTTCCCCACACCCCCGCGAAAAAAGAGATGAAGTCATTGAGTTTAATGATCAGTGGTTCAAGCTTTGAAGATTTCAGTTAAGAGGAATCCCACTCAAAACCAACTAGATCAGAGCAAGTCTGCCACCCTCTGAGAGAACTTCTTCCATAATAACAGGTGGTTCTCCTCTTTCTAATAGCTCTTCTAGCCCCAAATTTTAGCCTCGAGTATACAACCAATTAGGGTAGAGATATTAACTGAATGCATACAACTATTTATGAAGGCTTAACATAGAACACGCTGAACCAACCTCTTCTGTTAGACCGTTGATATAGTGCCAAAATAAGGGAAGAAGAGTCTTCTCTTCCAGAAAAAGGCACCCTTCACCAACCTTCGCCAAAATGTGGAAAGCAATCTATCAACCAAATAACAATTCCTATCCTTTCTCAAACACAAACTTTCTTTCATCCGTGATTCTCAATTAGAAAGACTTGCTTTCTATTGTAAAGCACCACCAAACATGAAGACAAATCAAAGAAGAAAGTACCAGATCCCTTTTCCAGATCCTAATTAGCAATTCGGTCATTCAACAATCTCCCGTTTTTTCTGTACTTATAGCAGGTTAACAGCATCATGTGCCTGCTATTCTCTCATACATCATTTGTCTTGGTAATTCGTATATGAAGCGTACTAGTAAATTTTTTATAAGTCTAACTTCGACAAGCCAAAACTCATAATTGGAACCAATGATACTGTTAATCTTAGCTAGCAGCATCAGTTTTGGAGTGGTCAATCAGTAGAGAAACACCAACATATCTGAGCGTAAGGTTTAACATAGAAGTCTGCAGTATTTGAGTTCTACATGCACTGGAACTATATTCTATTTTTCCATACAAAGTCCTGGGAAAACTGAAGTTTATTTCTAATTTCGTGCTGGAAGGAACAGAATAAACTTTATCATGCATTTATGTTTTCTGCGTGATCCATTAATTGGATCTTAGTATTATGTTGATATGATTGGCATAGGATTGCCCTAAGAATGATGGTCGGTTGTGTCATTTGTTCCTCCTAAAAAGATCTACTAAATTCATCGAGTTGTTCCAAAGAATCAAAACGGCCAGTTATTAATGGAATTCCTTGTCGGCTCTCTGTAAAATACTCATTTGGACGAGGGCTTCCAAAAACTGTTTGGAATTCGAACTTTAACGTTTACAAATTTAGTTCCTGAACTTTAATAATTTTTTGTAATCGACAAATCTACTAAATACAAAATTAAACGGTTAGGATTCCTAACCGGATTGATTATAGTCCATTCCCTTTCATTTCTATCATTTCAACTGCATATGTCAGCTTTAATTCATTTCATTTGGTTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCGTCACTGTTTCGTTCTTTTTTGCTTTATACTTTGTAAGGCTCCTTTCTCTTATTACTGCTCCAATTTCTGTTTGATATCCAAGTACTTAAGAGGAGGTCGAAACCGAACATCTTTACTCTAATACTACTTTTATGCAGTTTCTTGGACCATCTTTTGTTCACGATGGCACCAAAACGCCAATATCACCTCCACCGTACGTTGATCCATATGCTCTTTTAGAAGACGAAAGAATTTCACAAATGGCTCCTCGTGTAAATTGACGGACGCATAATCTCCTAATTGGTTGGTTTTCTACTACTTTGTTTTCCGTTCCCAATGTTAATTGATGTTCCTTACTATTATTATTAATATATCTAAATGATTATTAGCTAGAATTTTCTGGTTTAATTTACGTTTTCAAGACTCATGCTCCTGCTGCTTTTTCTTTTTGGCTAGGATTTACACATTTTAATTTGTGGGTCAAATTATTTCTCATAATATAATAAAATGATTATTAGCTGAAAA

mRNA sequence

ATGGCTGTTCTGCAAATTCTTAAATCAACTGTCTCTCCTCCTTCAATTTCTCAGCCGAAGTTTGGCTCTCAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACTAGGAGGTTTACACTGCTCCATGGCCGTCGGAGGAGTTTGCGATATGGCTGCGTTCGTAGAAGGTTGAGTTTCCGCTGTGCTGCTCAGGATTCTGATAAGGAAAGCAACGGCAATTTGAGAATAGTTGCAACACCTTCAGAAACCATCACTGACGTGTGTGTGTGTAGTGAAGAACCTCCAGAATCATTGTTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCTACTTCCTTGCTTGAGGATACTAGCAACACTGACTTTGGACTTGGTGGCGAGATGAAGGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTGACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCGTCACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTCTTGGACCATCTTTTGTTCACGATGGCACCAAAACGCCAATATCACCTCCACCGTACGTTGATCCATATGCTCTTTTAGAAGACGAAAGAATTTCACAAATGGCTCCTCGTGTAAATTGACGGACGCATAATCTCCTAATTGGTTGGTTTTCTACTACTTTGTTTTCCGTTCCCAATGTTAATTGATGTTCCTTACTATTATTATTAATATATCTAAATGATTATTAGCTAGAATTTTCTGGTTTAATTTACGTTTTCAAGACTCATGCTCCTGCTGCTTTTTCTTTTTGGCTAGGATTTACACATTTTAATTTGTGGGTCAAATTATTTCTCATAATATAATAAAATGATTATTAGCTGAAAA

Coding sequence (CDS)

ATGGCTGTTCTGCAAATTCTTAAATCAACTGTCTCTCCTCCTTCAATTTCTCAGCCGAAGTTTGGCTCTCAATCAAGCCGGTTCTTCTCGGAGTTGGATTCCACTAGGAGGTTTACACTGCTCCATGGCCGTCGGAGGAGTTTGCGATATGGCTGCGTTCGTAGAAGGTTGAGTTTCCGCTGTGCTGCTCAGGATTCTGATAAGGAAAGCAACGGCAATTTGAGAATAGTTGCAACACCTTCAGAAACCATCACTGACGTGTGTGTGTGTAGTGAAGAACCTCCAGAATCATTGTTCATGAAGGAACTGAAGAAGAGAGGTATAACTCCTACTTCCTTGCTTGAGGATACTAGCAACACTGACTTTGGACTTGGTGGCGAGATGAAGGGAGAAAACAGAGATTTTTCCCGTAGAAGTGCTGTTTCAACTGAAGTTGACAAAAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACAATTGGAGGAACGTTCTTCTTAGGATTCTGGCCGTTGATCGTCGTCACTGTTTCGTTCTTTTTTGCTTTATACTTTTTTCTTGGACCATCTTTTGTTCACGATGGCACCAAAACGCCAATATCACCTCCACCGTACGTTGATCCATATGCTCTTTTAGAAGACGAAAGAATTTCACAAATGGCTCCTCGTGTAAATTGA

Protein sequence

MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFRCAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN

Homology

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BLAST of Carg19701 vs. NCBI nr
Match: XP_022922737.1 (uncharacterized protein LOC111430640 [Cucurbita moschata])

HSP 1 Score: 419.1 bits (1076), Expect = 1.0e-113
Identity = 221/241 (91.70%), Postives = 222/241 (92.12%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           CAAQDSDKESNG                   EEPPESLFMKELKKRGITPTSLLEDTSNT
Sbjct: 61  CAAQDSDKESNG-------------------EEPPESLFMKELKKRGITPTSLLEDTSNT 120

Query: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180
           DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT
Sbjct: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180

Query: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 240
           FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDER+SQMAPRV
Sbjct: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERMSQMAPRV 222

Query: 241 N 242
           N
Sbjct: 241 N 222

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BLAST of Carg19701 vs. NCBI nr
Match: XP_022984914.1 (uncharacterized protein LOC111483048 [Cucurbita maxima])

HSP 1 Score: 418.3 bits (1074), Expect = 1.8e-113
Identity = 221/241 (91.70%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRF LLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           CAAQDSDKESNG                   EEPPESLFMKELKKRGITPTSLLEDTSNT
Sbjct: 61  CAAQDSDKESNG-------------------EEPPESLFMKELKKRGITPTSLLEDTSNT 120

Query: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180
           DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT
Sbjct: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180

Query: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 240
           FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV
Sbjct: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 222

Query: 241 N 242
           N
Sbjct: 241 N 222

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BLAST of Carg19701 vs. NCBI nr
Match: XP_023552655.1 (uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.0 bits (1068), Expect = 8.7e-113
Identity = 220/241 (91.29%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MAVLQILKSTVSPPSISQPKFGSQSSRFF ELDSTRRF LLHGRRRSLRYGCVRRRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFLELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           CAAQDSDKESNG                   EEPPESLFMKELKKRGITPTSLLEDTSNT
Sbjct: 61  CAAQDSDKESNG-------------------EEPPESLFMKELKKRGITPTSLLEDTSNT 120

Query: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180
           DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT
Sbjct: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180

Query: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 240
           FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV
Sbjct: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 222

Query: 241 N 242
           N
Sbjct: 241 N 222

[Close]

BLAST of Carg19701 vs. NCBI nr
Match: XP_022149320.1 (uncharacterized protein LOC111017763 [Momordica charantia])

HSP 1 Score: 360.9 bits (925), Expect = 3.3e-96
Identity = 192/241 (79.67%), Postives = 204/241 (84.65%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA LQ+LKS VSP SISQP FG +SSRF S+ DSTRRF   HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           CAAQD+DKESNG                   EEPPESLFMKELKKRG+TPTSLLED+++ 
Sbjct: 61  CAAQDADKESNG-------------------EEPPESLFMKELKKRGLTPTSLLEDSNSN 120

Query: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180
           DFGLGGEM GE RDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT
Sbjct: 121 DFGLGGEMTGEGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180

Query: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 240
           FFLGFWPLIV+TVSFFFALYFF GPSFVH+G +TPISPPPYVDPYALLEDERISQ APRV
Sbjct: 181 FFLGFWPLIVITVSFFFALYFFFGPSFVHNG-ETPISPPPYVDPYALLEDERISQTAPRV 221

Query: 241 N 242
           N
Sbjct: 241 N 221

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BLAST of Carg19701 vs. NCBI nr
Match: XP_008454422.1 (PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo] >XP_008454423.1 PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo])

HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 190/241 (78.84%), Postives = 202/241 (83.82%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA LQILKST+S PSIS P FGSQS+RFFS+ DS     LLHGRRRSLR  CV RR SFR
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFR 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           CAA+D+DKESNG                   EEPPESLFMKELKKRGITPTSLLEDT+N+
Sbjct: 61  CAAKDADKESNG-------------------EEPPESLFMKELKKRGITPTSLLEDTNNS 120

Query: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180
           DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT
Sbjct: 121 DFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180

Query: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 240
           FFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPPPYVDPYALLEDERISQ+AP V
Sbjct: 181 FFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPPPYVDPYALLEDERISQIAPPV 217

Query: 241 N 242
           N
Sbjct: 241 N 217

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BLAST of Carg19701 vs. TAIR10
Match: AT1G50020.1 (unknown protein)

HSP 1 Score: 192.6 bits (488), Expect = 2.8e-49
Identity = 100/151 (66.23%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 92  EEPPESLFMKELKKRGITPTSLLEDTS-NTDFGLGGEMKGENRDFSRRSAVSTEVDKSLS 151
           EEPPESLFMKELK+RG+TPTSLL+D   + D    G+  G +   S+ +A +   DKSL 
Sbjct: 62  EEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGNS---SKTTATTPAFDKSLL 121

Query: 152 NQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYFFLGPSFVHD 211
           NQRERS+ LNSEGLEGLIPRA++LLTIGGTFFLGFWPLIV+T+  F ALY + G  F+HD
Sbjct: 122 NQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIHD 181

Query: 212 GTKTPISPPPYVDPYALLEDERISQMAPRVN 242
           G++TP+SPPPY+DPYALLEDERIS M PR+N
Sbjct: 182 GSRTPVSPPPYIDPYALLEDERISGMDPRLN 209

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BLAST of Carg19701 vs. TrEMBL
Match: tr|A0A1S3BY38|A0A1S3BY38_CUCME (uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.0e-93
Identity = 190/241 (78.84%), Postives = 202/241 (83.82%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA LQILKST+S PSIS P FGSQS+RFFS+ DS     LLHGRRRSLR  CV RR SFR
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFR 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           CAA+D+DKESNG                   EEPPESLFMKELKKRGITPTSLLEDT+N+
Sbjct: 61  CAAKDADKESNG-------------------EEPPESLFMKELKKRGITPTSLLEDTNNS 120

Query: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180
           DFGLGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT
Sbjct: 121 DFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180

Query: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 240
           FFLGFWPLI++TVSFFF LYFF G SF+HDG KTPISPPPYVDPYALLEDERISQ+AP V
Sbjct: 181 FFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPPPYVDPYALLEDERISQIAPPV 217

Query: 241 N 242
           N
Sbjct: 241 N 217

[Close]

BLAST of Carg19701 vs. TrEMBL
Match: tr|A0A0A0KY14|A0A0A0KY14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000570 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.4e-90
Identity = 184/241 (76.35%), Postives = 201/241 (83.40%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA LQILKS++S PSIS   FGSQS+RF S+ DS     LLHGRRRSLRY CV RR +FR
Sbjct: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDS----LLLHGRRRSLRYACVYRRFTFR 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           CAA+D+DKE+NG                   EEPPESLFMKELKKRGITPTSLLEDT+++
Sbjct: 61  CAAKDTDKETNG-------------------EEPPESLFMKELKKRGITPTSLLEDTNSS 120

Query: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180
           DF LGGEM GENRDFSRRSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT
Sbjct: 121 DFELGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180

Query: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 240
           FFLGFWPLI++TVSFFF LYFFLG SF+HDG +TPISPPPYVDPYALLEDERISQ+AP V
Sbjct: 181 FFLGFWPLIIITVSFFFGLYFFLGASFIHDG-QTPISPPPYVDPYALLEDERISQIAPPV 217

Query: 241 N 242
           N
Sbjct: 241 N 217

[Close]

BLAST of Carg19701 vs. TrEMBL
Match: tr|W9RN54|W9RN54_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003356 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 8.2e-67
Identity = 145/242 (59.92%), Postives = 174/242 (71.90%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA +Q LK   SP S+S+P F      FFSE    +R         S  Y    +RL   
Sbjct: 1   MASVQFLKYNPSPVSVSRPNFPGNPRWFFSESSLRKRVVRFGSSGGSRNY--TNKRLRLF 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           CAAQD +KESNG                   EEPPESLFMKEL++RG+TPTSL EDT+ +
Sbjct: 61  CAAQDPEKESNG-------------------EEPPESLFMKELRRRGMTPTSLREDTNTS 120

Query: 121 DFGLGGE-MKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGG 180
           D+GL  E  + E R FS+R+AVSTEV+KSLS+QRERSM+LNSEGLEGLIPRA+LLLTIGG
Sbjct: 121 DYGLNDETTRKEGRAFSQRNAVSTEVEKSLSDQRERSMKLNSEGLEGLIPRARLLLTIGG 180

Query: 181 TFFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPR 240
           TFFLGFWPLI++TV+FF ALYF+ GP+FVHD +K PISPPPY+DPYALLE+ERISQ+APR
Sbjct: 181 TFFLGFWPLILITVAFFSALYFYFGPAFVHDASKMPISPPPYIDPYALLEEERISQIAPR 221

Query: 241 VN 242
           +N
Sbjct: 241 IN 221

[Close]

BLAST of Carg19701 vs. TrEMBL
Match: tr|A0A2I4DSU8|A0A2I4DSU8_9ROSI (uncharacterized protein LOC108983132 OS=Juglans regia OX=51240 GN=LOC108983132 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.5e-65
Identity = 148/243 (60.91%), Postives = 175/243 (72.02%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA LQILKS  +P SI  P F  +SS   SE DS +RF      R S  Y     R+   
Sbjct: 1   MASLQILKSAFTPVSIPLPNFPGKSS---SESDSRKRFLRFGWCRSSTYYTTKGFRVC-- 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           C ++DSD +SNG                   EEPPESLFMKEL+KRG+TPTSLLE+T  +
Sbjct: 61  CESRDSDNQSNG-------------------EEPPESLFMKELRKRGMTPTSLLEETKRS 120

Query: 121 DFGLGGE--MKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIG 180
           ++GL  E  +K E+R FS R+AVSTE++KSLSNQRERSM LNSEGLEGLIPRAKLLLTIG
Sbjct: 121 NYGLDNETNLKEEDRGFSNRNAVSTELEKSLSNQRERSMALNSEGLEGLIPRAKLLLTIG 180

Query: 181 GTFFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAP 240
           GTFF GFWPLI++TV+FF ALYF+ GP+FVHD +KTPISPP Y+DP+ALLE+ERISQ AP
Sbjct: 181 GTFFFGFWPLILITVTFFLALYFYFGPTFVHDASKTPISPPQYIDPFALLEEERISQNAP 219

Query: 241 RVN 242
           RVN
Sbjct: 241 RVN 219

[Close]

BLAST of Carg19701 vs. TrEMBL
Match: tr|M5VKJ8|M5VKJ8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G151000 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.9e-64
Identity = 140/241 (58.09%), Postives = 172/241 (71.37%), Query Frame = 0


Query: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60
           MA LQ+LKS++SP  +S   F  +SS  FS + S +    L   R S  Y  +RRRL   
Sbjct: 1   MASLQMLKSSLSPMPVSHSNFQGKSSWVFSGIQSRKSSIRLSSYRGSGYY--LRRRLRVC 60

Query: 61  CAAQDSDKESNGNLRIVATPSETITDVCVCSEEPPESLFMKELKKRGITPTSLLEDTSNT 120
           C AQ+ D +SNG                   EEPPESLFMKEL++RG+TPTSLLE+    
Sbjct: 61  CKAQEGDNKSNG-------------------EEPPESLFMKELRRRGMTPTSLLEEKERI 120

Query: 121 DFGLGGEMKGENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGT 180
           ++G   EM  E+R FS R+AVSTE++KSL+NQRERSMQLNSEGLEGLIPRA+LLLTIGGT
Sbjct: 121 EYGANDEMGKEDRGFSTRNAVSTEIEKSLANQRERSMQLNSEGLEGLIPRARLLLTIGGT 180

Query: 181 FFLGFWPLIVVTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRV 240
           FFLGFWPLI++TV+ F ALY + G +F+HDG+ +PISPP Y+DPY LLEDERISQ+APRV
Sbjct: 181 FFLGFWPLILITVALFSALYLYFGSTFIHDGSSSPISPPQYIDPYELLEDERISQIAPRV 220

Query: 241 N 242
           N
Sbjct: 241 N 220

The following BLAST results are available for this feature:

BLAST of Carg19701 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922737.1	1.0e-113	91.70	uncharacterized protein LOC111430640 [Cucurbita moschata]	[more]
XP_022984914.1	1.8e-113	91.70	uncharacterized protein LOC111483048 [Cucurbita maxima]	[more]
XP_023552655.1	8.7e-113	91.29	uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo]	[more]
XP_022149320.1	3.3e-96	79.67	uncharacterized protein LOC111017763 [Momordica charantia]	[more]
XP_008454422.1	1.5e-93	78.84	PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo] >XP_008454423.1 P...	[more]

BLAST of Carg19701 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50020.1	2.8e-49	66.23	unknown protein	[more]

BLAST of Carg19701 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19701 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BY38\|A0A1S3BY38_CUCME	1.0e-93	78.84	uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=...	[more]
tr\|A0A0A0KY14\|A0A0A0KY14_CUCSA	1.4e-90	76.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000570 PE=4 SV=1	[more]
tr\|W9RN54\|W9RN54_9ROSA	8.2e-67	59.92	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003356 PE=4 SV=1	[more]
tr\|A0A2I4DSU8\|A0A2I4DSU8_9ROSI	1.5e-65	60.91	uncharacterized protein LOC108983132 OS=Juglans regia OX=51240 GN=LOC108983132 P...	[more]
tr\|M5VKJ8\|M5VKJ8_PRUPE	2.9e-64	58.09	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G151000 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19701-RA	Carg19701-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35699	FAMILY NOT NAMED	coord: 1..241

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19701	Cla006458	Watermelon (97103) v1	carwmB0287
Carg19701	Csa4G000570	Cucumber (Chinese Long) v2	carcuB0322
Carg19701	MELO3C018026	Melon (DHL92) v3.5.1	carmeB0297
Carg19701	ClCG10G010000	Watermelon (Charleston Gray)	carwcgB0287
Carg19701	CSPI04G00080	Wild cucumber (PI 183967)	carcpiB0328
Carg19701	Cucsa.298520	Cucumber (Gy14) v1	carcgyB0346
Carg19701	CmaCh04G004300	Cucurbita maxima (Rimu)	carcmaB0408
Carg19701	CmaCh16G003040	Cucurbita maxima (Rimu)	carcmaB0406
Carg19701	CmoCh04G004610	Cucurbita moschata (Rifu)	carcmoB0403
Carg19701	CmoCh16G003220	Cucurbita moschata (Rifu)	carcmoB0402
Carg19701	Lsi03G010050	Bottle gourd (USVL1VR-Ls)	carlsiB269
Carg19701	Cp4.1LG14g04600	Cucurbita pepo (Zucchini)	carcpeB0407
Carg19701	Cp4.1LG01g02810	Cucurbita pepo (Zucchini)	carcpeB0408
Carg19701	CsGy4G000090	Cucumber (Gy14) v2	carcgybB0309
Carg19701	MELO3C018026.2	Melon (DHL92) v3.6.1	carmedB0308
Carg19701	CsaV3_4G000050	Cucumber (Chinese Long) v3	carcucB0328
Carg19701	Cla97C10G193020	Watermelon (97103) v2	carwmbB0302
Carg19701	Bhi11G000911	Wax gourd	carwgoB0381

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19701	Carg08104	Silver-seed gourd	carcarB324

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19701	Melon (DHL92) v3.6.1	carmedB0306
Carg19701	Cucumber (Gy14) v1	carcgyB0344
Carg19701	Cucurbita maxima (Rimu)	carcmaB0405
Carg19701	Cucurbita moschata (Rifu)	carcmoB0401
Carg19701	Cucurbita pepo (Zucchini)	carcpeB0409
Carg19701	Cucumber (Chinese Long) v2	carcuB0323
Carg19701	Cucumber (Chinese Long) v3	carcucB0329