CmaCh04G004300 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G004300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Tubulin alpha-6 chain, putative
Location	Cma_Chr04 : 2200956 .. 2205924 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTTCTTATTTTTGGAAAACTAAAATGAAACTATTTATTCTTCTTCTCCCGTTGAATTCCTTGGGAGGAAGAAAGTTCCAGCTCTGCTTCTAGTTCTACCTATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTACTCTTTCGTTCTCTCAGACGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGAGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATTCTCATAAGGAAAGCAATGGTAAGTTTTAGCCGGTTTTTCTTCTTCTTCTTCTTCTGATTCTGCTTGTTGCGGTCTTGTTTTTTGTTCTGTGTCTTTTTTTTCGTTCTCAGTGCATTTGCCTTGCTTGGATCTTCTTCATGAATTGATTTTCGTTATCATGGACTTCGTGTTGCTTATATTGAAGGCGAGAGATCGATTAGGCTACTAATTAACTTGTTTAGGTGAGGCAATAGTTCCATGGTGTGTGTTGTTCGGATGTTCCATCACTCTCACTCGTGAATGATCTTGCTCTTTTGAGACTCGTGCGAGCATTCATTCGGCTATTCTTTCGTCACTTCTGGTTTATCTTTCTCTGTGCATTTGCCTTGCTCGGATGTCTTGATGAATTGATGCTAGTGATCATTGACTTGAGCGAGAGATAGAGAGGCAATAAGTAGCTTAAGCCTTCGTTGAGGCAGAAGTTGCGTGGTGTAGTTTGTTGTTCAGATTGTCCGTCACTTCCGAATTTTCTTGTTCTGTTGATATTAGCTCAATCATGTAGCAAAATCGTACGAGACAAGATCCTTCCAGCCATTCGTCCGTCATTCCTTAAATCTCATTCTCTGTGCATTTTCCTTGTTTGGATATCTTGATGAATTGATGTTCGTTATTGTAGACATCGTTCTGCTTATTTATTTCGGAAGCGAGAAATGGAAACACAAAGGCATCAAGAGAGAGAATTCGGGAAGAACGGACGAATGGTTGGATGGACCTCGTACTATCTTGTTTTACCACATGCTTGTGCTACAGTCCACAGAATAAGGAAGTAGATGTTCATTATCATAGAGCTCATCTTGCTTAGTTTCAAAAGGCGAGAGTTAGGAGAGGCATCTAACTTTCTTAGAAGAGGCGGAAGTTGCACGGTGAAGTTTATTCAGCTGGTCCTAAATTTCTTAGTAATCATGTAGCAAAATTGTGCTAGTGTCCATCAAGCTATTTGAGTAAATGAGGAACGGAAGATGCTTGGGGGTACGCATAAGGATCGCTTAGTTGGCACTCTAATTCTGTTTGGAGCTTTATTTCTTGAGTCAACATATGCACAGCCGCAAAGATGAAATTTAAACCGGAATCTGAAAATTTAAGCTAAGAGTTTTGATGATGTTTATCATATTTTTAAAATTTAACCAAAATTTTTGTTCTTCAGCCAGAGAACACTTGGTAAATGGATAGAACCATCATTCCTACCAATATCTGTGTTAACCATGAATCTTAACTTGGTTTTTTATTGATCCAGTTGTTATAGTTAAAGCTTTTAGGGAGCTACATATCTGTACCAAGCCAACAGTTCTAGTACCCGTACTTGTATTAGAAGTGGTAGCTGGTTATGCTTGTTTAGATTGCTTGAACAGCTTGCTAAAGGTCGAATTGCTCCTTTGAGAAGCATTTCCATTTCGGACATTAGAGCTTTGTTCAGCCAGCGTAACAGTGGCATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGTCTCTTTTGAGTGCGTTATCTTCTTACCATGTTCATACTTGGCCTTTCTTCTTCGGTCTCATATAGAAGAACTTTTTTGTATTAGAGCATAGCTTTTAGAGTTCACCTGATTTGATGTTCCAAGAAAGTTTGTTTCTGCGTCAGTAGTAATGCTTCTACTAGTAGGTCTTTGTAGTCGGAATCTTTCACATTCTGAATCTTAGTTTTTGTTGATTCTAGGAGCCTGAAAATTCTCTTTTCTTGACTATTTTCTTGTACGTTTTTTTATGCATAAGCCGTACCTTCCCACTCAAGTTTGCCACAAGTAGCATACAAGAAGACTATATTGTTGATTTAGGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGTTAGTGAAAGCTTTATTTGGCTCTCCCACGATCTCTATAGAGGTCTGGTATGATAGAAATCTTTTGCCAATCTTATTTGTCATCAAGTTGACCAATCATAATATGCCCATATTATTCTCTGTTGTAGTTTGAATCAGTCAAACTATTGTAAAAGGTTTCCCCATTTCATTTGTGACTATTAATGGGCATGCATCACCTTCAAAAACCATCACAGCCGTGTGTGTGTATTCAGTATTATTACTTGAGTTGAATGTATTGAAGAATGTTTTCTGTTTGAGACCTTCGGTTATGTTAATTTAAGGTGTTATACATTACTTTTCTCAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTTATTCGAGTTTATGAGTTATTCAAATTTCTAATTCATTATATCTGATCTGTTTTGATTTCTATTGTTCCCTTGCTTGAAGAGTTGTGACCAAAATAACCAGAATTTGGTGAACAATTAATGAAAATATTATTATCATTCACCAAGAACAATGAAAGACTGGCCGGCCATACAAACCAAAAGCTAAAGACGTAAGGAATCTATAAAAAAGAATTACAATAAGTTGTCGGCTCCAAAGTTGATAATCATCCAAAACAATTGGACGACCAAAAACTCTCTGGAGCAAAAGCATAAAGAAAAGCATTGTAGTGAGCCAAGCTCCAAAATATCCTACCATTATCTTTTTTTTCCCCATAAAAATCCTCATAAGTCTTTCTAACTTAATACTCCAAACAGCAACAAAGTAATCCACCTGCTGACTGCTGATGAACCTTTCCTTCGTTGGTAAAGGGAGGATGAAAATAATCTCAATTCTCATCCACACATCAGTGATTAGAAATGAAAGAAACACTCCAGATAATACACTAGATGTATTGAAAATTTTCTACCAAAGCTTCTCAGGAAACATGCATCCAAGAATGCTCTTTGGATGTGCCTGCTTGCAAAGATCACACCATTGAAGTCAAACTACCCAAGACAATTTTGAAGAAGTCCTTGATATTGATTCTCCCAAGGCAACCAGCCAAGAGCAGAATCTAAGGGTGTTGTTTGTTGGTGATATGATGGTATCTTCATAAAATATAAAATTACTAGTAGTTGCCGACTAAATATTAGGTTGAATATAAAGTTGTATTAATTAATTGATGAACATATTTTATGTCTCAACCACAAACTTTCCTCCATCCCTATAGCTCAACTAGAAAGATTTACTTTCTATAGGTATAGAAAAGCACCATCAAACATGAAGGCCAAGATAATCGAGAAATAATTAGTCAAGTTGTATTAGTTCTTATAAAAACAAAACGTACTTGTAAATTTTTTTTAAAGAGGTGTTACTTTGATACGCCAAGGATTGTAATCGGAATCCATCATAGAGAGGTTTGAAATTGAAGTATGCAGTATTTGAGCCTTCTACATGTCACTGGAACTGTATTCTATTATCAATCAAAAACCTAGGAAAAACTGGGGAAGTTCATTCCTAATTTTGTGCTGGAATGAACACAATCTGTGTGATCCATTCGTTAACATTATAACGATATCATTGGCAGAAGATCACCCTAGTTAAGAATGATTCTTGGCTCACTTCTAAAAGAGAGAACAGTTGCTATATGATTGCTTTAATTTCTTCTTTCTTGCATAATTTGCTCTACTTATTTCGTACTTTTTTCATTCCAATTTCAAGTGCTTATCATTTCTACGGCATATTTCAATCATCTATATTGTAGTTTGTGTTAGTAATCACAACCCTACACAATGATATAACATCATCCACTTTGAGAATAAACTCTCCTGATTTTGCTTTTCGCTCTCCTGAAAGGCTTCATACCAATAGAGATAGTATTTCTTACTTATAAACTCATAATCAATCCCTTAATTAGCCGATGTGGGACTCTTCACCCAACAATCCTCAACCGTTCGAACATGTTTAAGGTTAACATTGTTTTATTTGGTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTGTAAGGCTTCTTGAATTCTATATTAACATCCAAGTACTAAAGAGGAGCTAGACTTTGTGCTTGATTGCAAAGCCCTAGCTGAAAACTAACCATTCTGAAATATTTTGTTCCAATGCAGTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGACTGGTACCCATATAATCCTAATTGGTTGGTTTTCTGCTACTTACTTTTCCCTTTCGCAATATTGATTCCTGTCCTTGCAATATTATGTATATATGAAAATGATTTTTAGCTAGAATTTTCTTGTTTACACTTTTTTTGGTTAGGATCTTTTTGTTTACTCTATGCGGGTGAGAATTTGAATATCTGACGACTTTTATGAGGAGC

mRNA sequence

TGTTTTCTTATTTTTGGAAAACTAAAATGAAACTATTTATTCTTCTTCTCCCGTTGAATTCCTTGGGAGGAAGAAAGTTCCAGCTCTGCTTCTAGTTCTACCTATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTACTCTTTCGTTCTCTCAGACGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGAGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATTCTCATAAGGAAAGCAATGACATCGTTCTGCTTATTTATTTCGGAAGCGAGAAATGGAAACACAAAGGCATCAAGAGAGAGAATTCGGGAAGAACGGACGAATGATTGCTTGAACAGCTTGCTAAAGGTCGAATTGCTCCTTTGAGAAGCATTTCCATTTCGGACATTAGAGCTTTGTTCAGCCAGCGTAACAGTGGCATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGACTGGTACCCATATAATCCTAATTGGTTGGTTTTCTGCTACTTACTTTTCCCTTTCGCAATATTGATTCCTGTCCTTGCAATATTATGTATATATGAAAATGATTTTTAGCTAGAATTTTCTTGTTTACACTTTTTTTGGTTAGGATCTTTTTGTTTACTCTATGCGGGTGAGAATTTGAATATCTGACGACTTTTATGAGGAGC

Coding sequence (CDS)

ATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGA

Protein sequence

MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN

Homology

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BLAST of CmaCh04G004300 vs. TrEMBL
Match: A0A0A0KY14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000570 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-63
Identity = 145/210 (69.05%), Postives = 157/210 (74.76%), Query Frame = 1


Query: 3   SVRLPSLSSMNFP----------------GKDRLNHLIAVYGQCFQFR----KTPSIFQG 62
           S+ LPS+S  NF                 G+ R      VY + F FR     T     G
Sbjct: 10  SLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRR-FTFRCAAKDTDKETNG 69

Query: 63  EEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSN 122
           EEPPESLFMKELKKRGITPTSLLEDT S++FELGGE TGEN DFS  SAVSTEV+KSLSN
Sbjct: 70  EEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVSTEVNKSLSN 129

Query: 123 QRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDG 182
           QRERSMQLNSEGLEGLIPRAKLLLT+GGTFFLGFWPLI+ITV+FFF  YFF G+SF+HDG
Sbjct: 130 QRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFLGASFIHDG 189

Query: 183 TQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
            QTP SPPPYV PYA LEDERISQIAP VN
Sbjct: 190 -QTPISPPPYVDPYALLEDERISQIAPPVN 217

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BLAST of CmaCh04G004300 vs. TrEMBL
Match: E5GBH6_CUCME (Tubulin alpha chain OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.2e-56
Identity = 120/142 (84.51%), Postives = 129/142 (90.85%), Query Frame = 1


Query: 51  MKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQL 110
           MKELKKRGITPTSLLEDT +++F LGGE TGEN DFS  SAVSTEV+KSLSNQRERSMQL
Sbjct: 1   MKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQL 60

Query: 111 NSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPP 170
           NSEGLEGLIPRAKLLLT+GGTFFLGFWPLI+ITV+FFF  YFFFGSSF+HDG +TP SPP
Sbjct: 61  NSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP 120

Query: 171 PYVYPYAPLEDERISQIAPRVN 193
           PYV PYA LEDERISQIAP VN
Sbjct: 121 PYVDPYALLEDERISQIAPPVN 141

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BLAST of CmaCh04G004300 vs. TrEMBL
Match: W9RN54_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003356 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.3e-52
Identity = 111/152 (73.03%), Postives = 131/152 (86.18%), Query Frame = 1


Query: 42  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTG-ENIDFSGTSAVSTEVSKSL 101
           GEEPPESLFMKEL++RG+TPTSL EDT ++++ L  ETT  E   FS  +AVSTEV KSL
Sbjct: 70  GEEPPESLFMKELRRRGMTPTSLREDTNTSDYGLNDETTRKEGRAFSQRNAVSTEVEKSL 129

Query: 102 SNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVH 161
           S+QRERSM+LNSEGLEGLIPRA+LLLT+GGTFFLGFWPLI+ITVAFF A YF+FG +FVH
Sbjct: 130 SDQRERSMKLNSEGLEGLIPRARLLLTIGGTFFLGFWPLILITVAFFSALYFYFGPAFVH 189

Query: 162 DGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           D ++ P SPPPY+ PYA LE+ERISQIAPR+N
Sbjct: 190 DASKMPISPPPYIDPYALLEEERISQIAPRIN 221

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BLAST of CmaCh04G004300 vs. TrEMBL
Match: M5VKJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011181mg PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 6.0e-51
Identity = 114/190 (60.00%), Postives = 140/190 (73.68%), Query Frame = 1


Query: 3   SVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPT 62
           S+RL S     +  + RL         C + ++  +   GEEPPESLFMKEL++RG+TPT
Sbjct: 38  SIRLSSYRGSGYYLRRRLR-------VCCKAQEGDNKSNGEEPPESLFMKELRRRGMTPT 97

Query: 63  SLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRA 122
           SLLE+ +  E+    E   E+  FS  +AVSTE+ KSL+NQRERSMQLNSEGLEGLIPRA
Sbjct: 98  SLLEEKERIEYGANDEMGKEDRGFSTRNAVSTEIEKSLANQRERSMQLNSEGLEGLIPRA 157

Query: 123 KLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDE 182
           +LLLT+GGTFFLGFWPLI+ITVA F A Y +FGS+F+HDG+ +P SPP Y+ PY  LEDE
Sbjct: 158 RLLLTIGGTFFLGFWPLILITVALFSALYLYFGSTFIHDGSSSPISPPQYIDPYELLEDE 217

Query: 183 RISQIAPRVN 193
           RISQIAPRVN
Sbjct: 218 RISQIAPRVN 220

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BLAST of CmaCh04G004300 vs. TrEMBL
Match: A0A061E8B1_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_007268 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.7e-50
Identity = 115/201 (57.21%), Postives = 138/201 (68.66%), Query Frame = 1


Query: 8   SLSSMNFPGKDRLNHLIAVYGQCFQF--------------RKTPSIFQGEEPPESLFMKE 67
           S+S  NFPGK      +  + +C  F              ++  +   GEEPPES FMKE
Sbjct: 15  SISHSNFPGKSDFRKKLLSFNRCRSFGPLHNQRSKIHCATQEGDNKSNGEEPPESQFMKE 74

Query: 68  LKKRGITPTSLLEDTKSTEFELGGET-TGENID-FSGTSAVSTEVSKSLSNQRERSMQLN 127
           LK+RG+TP SLLED K T + +  E   GE    FS  + VSTE  KSLSNQRERSM+LN
Sbjct: 75  LKRRGMTPASLLEDAKRTNYGVDEEMKVGEEAGTFSNRNVVSTEYEKSLSNQRERSMELN 134

Query: 128 SEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPP 187
           SEGLEGL+PRAKLLLT+GGTFFLGFWP+I+ T+AFF A Y +FGSSF+HD ++T  SPP 
Sbjct: 135 SEGLEGLVPRAKLLLTIGGTFFLGFWPVILSTIAFFTALYLYFGSSFIHDASETSISPPQ 194

Query: 188 YVYPYAPLEDERISQIAPRVN 193
           YV P+A LEDERISQ APRVN
Sbjct: 195 YVDPFALLEDERISQTAPRVN 215

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BLAST of CmaCh04G004300 vs. TAIR10
Match: AT1G50020.1 (AT1G50020.1 unknown protein)

HSP 1 Score: 185.3 bits (469), Expect = 3.6e-47
Identity = 98/153 (64.05%), Postives = 123/153 (80.39%), Query Frame = 1


Query: 41  QGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELG-GETTGENIDFSGTSAVSTEVSKS 100
           +GEEPPESLFMKELK+RG+TPTSLL+D +  + E+  G+ TG +   S T+A +    KS
Sbjct: 60  KGEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGNS---SKTTATTPAFDKS 119

Query: 101 LSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFV 160
           L NQRERS+ LNSEGLEGLIPRA++LLT+GGTFFLGFWPLIV+T+  F A Y +FG+ F+
Sbjct: 120 LLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFI 179

Query: 161 HDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           HDG++TP SPPPY+ PYA LEDERIS + PR+N
Sbjct: 180 HDGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209

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BLAST of CmaCh04G004300 vs. NCBI nr
Match: gi|449465109|ref|XP_004150271.1| (PREDICTED: uncharacterized protein LOC101221726 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 2.0e-63
Identity = 145/210 (69.05%), Postives = 157/210 (74.76%), Query Frame = 1


Query: 3   SVRLPSLSSMNFP----------------GKDRLNHLIAVYGQCFQFR----KTPSIFQG 62
           S+ LPS+S  NF                 G+ R      VY + F FR     T     G
Sbjct: 10  SLSLPSISHSNFGSQSTRFVSDFDSLLLHGRRRSLRYACVYRR-FTFRCAAKDTDKETNG 69

Query: 63  EEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSN 122
           EEPPESLFMKELKKRGITPTSLLEDT S++FELGGE TGEN DFS  SAVSTEV+KSLSN
Sbjct: 70  EEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRSAVSTEVNKSLSN 129

Query: 123 QRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDG 182
           QRERSMQLNSEGLEGLIPRAKLLLT+GGTFFLGFWPLI+ITV+FFF  YFF G+SF+HDG
Sbjct: 130 QRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFLGASFIHDG 189

Query: 183 TQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
            QTP SPPPYV PYA LEDERISQIAP VN
Sbjct: 190 -QTPISPPPYVDPYALLEDERISQIAPPVN 217

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BLAST of CmaCh04G004300 vs. NCBI nr
Match: gi|659108855|ref|XP_008454422.1| (PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-61
Identity = 129/151 (85.43%), Postives = 138/151 (91.39%), Query Frame = 1


Query: 42  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 101
           GEEPPESLFMKELKKRGITPTSLLEDT +++F LGGE TGEN DFS  SAVSTEV+KSLS
Sbjct: 68  GEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRSAVSTEVNKSLS 127

Query: 102 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD 161
           NQRERSMQLNSEGLEGLIPRAKLLLT+GGTFFLGFWPLI+ITV+FFF  YFFFGSSF+HD
Sbjct: 128 NQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHD 187

Query: 162 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           G +TP SPPPYV PYA LEDERISQIAP VN
Sbjct: 188 G-KTPISPPPYVDPYALLEDERISQIAPPVN 217

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BLAST of CmaCh04G004300 vs. NCBI nr
Match: gi|307135958|gb|ADN33818.1| (tubulin alpha chain [Cucumis melo subsp. melo])

HSP 1 Score: 225.3 bits (573), Expect = 8.9e-56
Identity = 120/142 (84.51%), Postives = 129/142 (90.85%), Query Frame = 1


Query: 51  MKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQL 110
           MKELKKRGITPTSLLEDT +++F LGGE TGEN DFS  SAVSTEV+KSLSNQRERSMQL
Sbjct: 1   MKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRSAVSTEVNKSLSNQRERSMQL 60

Query: 111 NSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPP 170
           NSEGLEGLIPRAKLLLT+GGTFFLGFWPLI+ITV+FFF  YFFFGSSF+HDG +TP SPP
Sbjct: 61  NSEGLEGLIPRAKLLLTIGGTFFLGFWPLIIITVSFFFGLYFFFGSSFIHDG-KTPISPP 120

Query: 171 PYVYPYAPLEDERISQIAPRVN 193
           PYV PYA LEDERISQIAP VN
Sbjct: 121 PYVDPYALLEDERISQIAPPVN 141

[Close]

BLAST of CmaCh04G004300 vs. NCBI nr
Match: gi|657962729|ref|XP_008372963.1| (PREDICTED: uncharacterized protein LOC103436318 [Malus domestica])

HSP 1 Score: 212.6 bits (540), Expect = 6.0e-52
Identity = 109/165 (66.06%), Postives = 134/165 (81.21%), Query Frame = 1


Query: 27  YGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDF 86
           +G C + +++ S   GEEPPESLFMKEL++RG+ PTSLLE+ + TE+ +  E   ++  F
Sbjct: 57  FGVCCKAQESDSKSNGEEPPESLFMKELRRRGMNPTSLLEEKERTEYGMNEEMRNKDRGF 116

Query: 87  SGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAF 146
           S  +AVSTE+ KSL+NQRERSMQLNSEGLEGLIPRA+LLLT+GGTFFLGFWPLI+ITVA 
Sbjct: 117 SARNAVSTEIEKSLANQRERSMQLNSEGLEGLIPRARLLLTIGGTFFLGFWPLILITVAL 176

Query: 147 FFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRV 192
           F A Y +FGS+FVHDG+ +P SPP Y+ PY  LEDERISQIAPRV
Sbjct: 177 FSALYLYFGSTFVHDGSSSPMSPPQYIDPYELLEDERISQIAPRV 221

[Close]

BLAST of CmaCh04G004300 vs. NCBI nr
Match: gi|703096134|ref|XP_010095744.1| (hypothetical protein L484_003356 [Morus notabilis])

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 111/152 (73.03%), Postives = 131/152 (86.18%), Query Frame = 1


Query: 42  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTG-ENIDFSGTSAVSTEVSKSL 101
           GEEPPESLFMKEL++RG+TPTSL EDT ++++ L  ETT  E   FS  +AVSTEV KSL
Sbjct: 70  GEEPPESLFMKELRRRGMTPTSLREDTNTSDYGLNDETTRKEGRAFSQRNAVSTEVEKSL 129

Query: 102 SNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVH 161
           S+QRERSM+LNSEGLEGLIPRA+LLLT+GGTFFLGFWPLI+ITVAFF A YF+FG +FVH
Sbjct: 130 SDQRERSMKLNSEGLEGLIPRARLLLTIGGTFFLGFWPLILITVAFFSALYFYFGPAFVH 189

Query: 162 DGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           D ++ P SPPPY+ PYA LE+ERISQIAPR+N
Sbjct: 190 DASKMPISPPPYIDPYALLEEERISQIAPRIN 221

The following BLAST results are available for this feature:

BLAST of CmaCh04G004300 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G004300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY14_CUCSA	1.4e-63	69.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000570 PE=4 SV=1	[more]
E5GBH6_CUCME	6.2e-56	84.51	Tubulin alpha chain OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
W9RN54_9ROSA	9.3e-52	73.03	Uncharacterized protein OS=Morus notabilis GN=L484_003356 PE=4 SV=1	[more]
M5VKJ8_PRUPE	6.0e-51	60.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011181mg PE=4 SV=1	[more]
A0A061E8B1_THECC	6.7e-50	57.21	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_007268 PE=4 SV=1	[more]

BLAST of CmaCh04G004300 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50020.1	3.6e-47	64.05	unknown protein	[more]

BLAST of CmaCh04G004300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465109\|ref\|XP_004150271.1\|	2.0e-63	69.05	PREDICTED: uncharacterized protein LOC101221726 [Cucumis sativus]	[more]
gi\|659108855\|ref\|XP_008454422.1\|	1.4e-61	85.43	PREDICTED: uncharacterized protein LOC103494832 [Cucumis melo]	[more]
gi\|307135958\|gb\|ADN33818.1\|	8.9e-56	84.51	tubulin alpha chain [Cucumis melo subsp. melo]	[more]
gi\|657962729\|ref\|XP_008372963.1\|	6.0e-52	66.06	PREDICTED: uncharacterized protein LOC103436318 [Malus domestica]	[more]
gi\|703096134\|ref\|XP_010095744.1\|	1.3e-51	73.03	hypothetical protein L484_003356 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0032259	methylation
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008168	methyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G004300.1	CmaCh04G004300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35699	FAMILY NOT NAMED	coord: 42..192 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G004300	Cucsa.298520	Cucumber (Gy14) v1	cgycmaB0825
CmaCh04G004300	Cla006457	Watermelon (97103) v1	cmawmB653
CmaCh04G004300	Csa4G000570	Cucumber (Chinese Long) v2	cmacuB709
CmaCh04G004300	MELO3C018026	Melon (DHL92) v3.5.1	cmameB700
CmaCh04G004300	ClCG10G010010	Watermelon (Charleston Gray)	cmawcgB609
CmaCh04G004300	CSPI04G00080	Wild cucumber (PI 183967)	cmacpiB715
CmaCh04G004300	CmoCh04G004610	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G004300	CmoCh16G003230	Cucurbita moschata (Rifu)	cmacmoB701
CmaCh04G004300	Lsi03G010050	Bottle gourd (USVL1VR-Ls)	cmalsiB657
CmaCh04G004300	Cp4.1LG14g04600	Cucurbita pepo (Zucchini)	cmacpeB715
CmaCh04G004300	Cp4.1LG01g02810	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G004300	MELO3C018026.2	Melon (DHL92) v3.6.1	cmamedB789
CmaCh04G004300	CsaV3_4G000050	Cucumber (Chinese Long) v3	cmacucB0843
CmaCh04G004300	Cla97C10G193020	Watermelon (97103) v2	cmawmbB713
CmaCh04G004300	Bhi11G000911	Wax gourd	cmawgoB0814
CmaCh04G004300	CsGy4G000090	Cucumber (Gy14) v2	cgybcmaB543
CmaCh04G004300	Carg08104	Silver-seed gourd	carcmaB0529
CmaCh04G004300	Carg19701	Silver-seed gourd	carcmaB0408

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G004300	CmaCh16G003040	Cucurbita maxima (Rimu)	cmacmaB351

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G004300	Cucumber (Gy14) v1	cgycmaB0232
CmaCh04G004300	Cucumber (Gy14) v1	cgycmaB0629
CmaCh04G004300	Cucurbita moschata (Rifu)	cmacmoB678
CmaCh04G004300	Wild cucumber (PI 183967)	cmacpiB786
CmaCh04G004300	Cucumber (Chinese Long) v2	cmacuB775
CmaCh04G004300	Cucumber (Chinese Long) v2	cmacuB776
CmaCh04G004300	Melon (DHL92) v3.5.1	cmameB672
CmaCh04G004300	Melon (DHL92) v3.5.1	cmameB711
CmaCh04G004300	Cucurbita pepo (Zucchini)	cmacpeB719
CmaCh04G004300	Cucurbita pepo (Zucchini)	cmacpeB749
CmaCh04G004300	Bottle gourd (USVL1VR-Ls)	cmalsiB640
CmaCh04G004300	Bottle gourd (USVL1VR-Ls)	cmalsiB662
CmaCh04G004300	Cucumber (Gy14) v2	cgybcmaB843
CmaCh04G004300	Cucumber (Gy14) v2	cgybcmaB964
CmaCh04G004300	Melon (DHL92) v3.6.1	cmamedB754
CmaCh04G004300	Melon (DHL92) v3.6.1	cmamedB801
CmaCh04G004300	Silver-seed gourd	carcmaB0634
CmaCh04G004300	Silver-seed gourd	carcmaB1027
CmaCh04G004300	Cucumber (Chinese Long) v3	cmacucB0914
CmaCh04G004300	Cucumber (Chinese Long) v3	cmacucB0918
CmaCh04G004300	Watermelon (97103) v2	cmawmbB744
CmaCh04G004300	Cucurbita maxima (Rimu)	cmacmaB163