Carg08104 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08104
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tubulin alpha-6 chain
Location	Cucurbita_argyrosperma_scaffold_050 : 743009 .. 745361 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCTTTCGTTCTCTCAGCCGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGCGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATGCTCATAAGGAAAGCAATGGTAAGTTTTAGCCGGCTTTTCTTCTTCTTCTTCTTCTGATTCTGCTTGTTGCGGTCTTGTTTTTTGTTCTGTGTTTTTTTTTTTTCGTTCTCAGTGCATTTGCCTTGCTTGGATCTTCTTCATGAATTGATTTTCGTTATCATGGACTTCGTGTTGCTCATTTTGAAGGCGAGAGATCGAGAGGCTACTAATTAACTTGTTTAGGTGAGGCAATAGTTCCATGGTGTGTGTTGTTCGGATGTTCCATCACTCTCACTCGTGAATGATCTTGCTCTTTTGAGAATCGTGCGAGCATTCATTCGGCTATTCTTTCGTCACTTCTGGTTTATCTTTCTCTGTGCATTTTCCTTGCTCGGATGCCTTGATGAATTGATGCTAGTGATCATTGACTTGAGCGAGATATAGAGAGGCAATAAGTAGCTTAAGCCTTCGCTGAGGCAGAATTTGCGTGGTGTAGTTTGTTGTTCAGATTGTCCGTCACTTCCGAATTTTCTTGTTCTGTGGATATTAGCTCAATCATTTAGAAAAATCGTACGAGACAAGATCCTTCCAGCCATTCGTCCGTCATTCCTTAAATCTCATTCACTGTGCATTTTCCTTGTTTGGATATCTTGATGAATGGATGTTCGTTATTGTAGACATCGTTCTGCTTATTTATTTCCGAAGCGAGAAATGGAAACACAAATGCACCAAGAGAGAGAATTCGGGAAGAACGGACGAATAGTTGGATGGACCTCGTACTATCTTGTTTTACCACATGCTTGTGCTACAGTCCACAGAATAAGGTAGTAGATGTTCATTATCATAGAGCTCATCTTGCTTAGTTTCAAAAGGCGAGAGTTAGGAGAGGCATCTAACTTTCTTAGAAGAGGCGGAAGTTGCACGGTGAAAGCTTATTTAGCTGGTCTTTCATTTCTTAGTAATCATGTAGCAAAATTGTGCTAGTGTCCATCAAGCTATTTGAGTAAATGAGGAACGGAAGATGCTTGCGGCTACGCATAAGGATCGCTTAGTTGGCACTCTAATTCTGTTTGGAGCTTTATTCTTGAGTCAACATATGCACAGCCGCAAAGATGAAATTTAAACCGGAATCTGAAAACTTAAGCTAAGAGTTTTGATGATGTTTATCATATTTTTAAAATTTAACCAAACTTTTTGTTCTTCGGCCAGAAAACACTTGGTAGATGGATAGAACCATCATTCCTACCAATATCTGTGTTAACCATGAATCTGTAACCGTGGTTTTTATTGGGCCAGTTGTTATAGTTAAAGCTTTTAGGAAGCTACATATCTGTACCAAAGCAACAGTTCTAGTACCCGTACTTGTATTAGGAGTGGTAGCTGGCTATGCTTGTTTAGATTGCTTGAACAGCTTGCTAAAGGTCGAATTGCTCCTTTGAGAAGCATTTCCATTTCGGACATTAGAGCTTTGTTCAGCCAGCATAACAGTGGCATGGTTTCTTTAGTCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGTCTTTTTTGAGTGCATTATCTTCTTACCATGTTCATACTTGGCCTTTCTTCTTCGGTCTCATATAGAGGAACTTTTACTTATTAGAGCATAGCTTTTAGAGTTCATCTGATTTGATGTTCCAAGAAAGTTTGTGTCTGCCTCAGTAGTAATGCTTGTAATAGTAGGTCTTCATAGTCGGAATCTTTCATATTCCGCATCTTAGTTTTTGTTAATTCTAGTATATTACTTGAGTTGAATGTATTGAAGAATGTTTTTTGTTTGAGACCTTCGATTATGTTAATTTAAGGTGTTATACACTACTTTTTTCAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCACTGAATTTGAACTTGGTGTTGAGGCGACGGGAGGAAACCTAGATTTATCCGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTTATTCGAGTTTATGAGTTATTCAAATTTCTAAATTCATTATATCTGATCTGTTTTGATTTCTATTGTTCCCTTGCTTGA

mRNA sequence

ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCTTTCGTTCTCTCAGCCGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGCGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATGCTCATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCACTGAATTTGAACTTGGTGTTGAGGCGACGGGAGGAAACCTAGATTTATCCGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTTATTCGAGTTTATGAGTTATTCAAATTTCTAAATTCATTATATCTGATCTGTTTTGATTTCTATTGTTCCCTTGCTTGA

Coding sequence (CDS)

ATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTCCTCTTTCGTTCTCTCAGCCGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGCGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATGCTCATAAGGAAAGCAATGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAACAGCACTGAATTTGAACTTGGTGTTGAGGCGACGGGAGGAAACCTAGATTTATCCGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTTATTCGAGTTTATGAGTTATTCAAATTTCTAAATTCATTATATCTGATCTGTTTTGATTTCTATTGTTCCCTTGCTTGA

Protein sequence

MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFRCAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTSAVSTEVSKSLSNQRERSMQLNSEGLEVNFLMILFIRVYELFKFLNSLYLICFDFYCSLA

Homology

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: XP_022942490.1 (uncharacterized protein LOC111447509 isoform X2 [Cucurbita moschata])

HSP 1 Score: 207.2 bits (526), Expect = 4.6e-50
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           XAAQDAHKESNGEEPPESLFMKELKKRGI PTSLLEDTNSTEFELGVEATGG+LDLSGTS
Sbjct: 61  XAAQDAHKESNGEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQ ERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQMERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: XP_022942489.1 (uncharacterized protein LOC111447509 isoform X1 [Cucurbita moschata])

HSP 1 Score: 201.1 bits (510), Expect = 3.3e-48
Identity = 151/186 (81.18%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           XAAQDAHKESNGEEPPESLFMKELKKRGI PTSLLEDTNSTEFELGVEATGG+LDLSGTS
Sbjct: 61  XAAQDAHKESNGEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE-----VNFLMIL----FIRVYELFKFLNSLYLIC 178
           AVSTEVSKSLSNQ ERSMQLNSEGLE        L+ L    F+  + L     SL+   
Sbjct: 121 AVSTEVSKSLSNQMERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVSLFFAL 180

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: XP_023532263.1 (uncharacterized protein LOC111794456 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.0 bits (502), Expect = 2.8e-47
Identity = 138/146 (94.52%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFF+ELD XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFSELDXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDT STEFELG E TG N+D SGTS
Sbjct: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: XP_023532257.1 (uncharacterized protein LOC111794456 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.0 bits (502), Expect = 2.8e-47
Identity = 138/146 (94.52%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAALQILKSTVSPLSFSQPSFGVQSSRFF+ELD XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFSELDXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDT STEFELG E TG N+D SGTS
Sbjct: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. NCBI nr
Match: XP_022991987.1 (uncharacterized protein LOC111488465 isoform X2 [Cucurbita maxima])

HSP 1 Score: 192.2 bits (487), Expect = 1.5e-45
Identity = 136/146 (93.15%), Postives = 138/146 (94.52%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAALQILKSTVS LSFSQ SFGVQSSRFFTELD XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAALQILKSTVSTLSFSQTSFGVQSSRFFTELDXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
           XAAQD+HKESNGEEPPESLFMKELKKRGITPTSLLEDT STEFELG E TG N+D SGTS
Sbjct: 61  XAAQDSHKESNGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEVSKSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 146

[Close]

BLAST of Carg08104 vs. TAIR10
Match: AT1G50020.1 (unknown protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-15
Identity = 47/85 (55.29%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 62  AAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTSA 121
           A      +S GEEPPESLFMKELK+RG+TPTSLL+D    + E+      GN   S T+A
Sbjct: 51  ALNGGDNQSKGEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGN--SSKTTA 110

Query: 122 VSTEVSKSLSNQRERSMQLNSEGLE 147
            +    KSL NQRERS+ LNSEGLE
Sbjct: 111 TTPAFDKSLLNQRERSLALNSEGLE 133

[Close]

BLAST of Carg08104 vs. TrEMBL
Match: tr|A0A1S3BY38|A0A1S3BY38_CUCME (uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35
Identity = 93/146 (63.70%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA+LQILKST+S  S S P+FG QS+RFF++ DS                          
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFR 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
            AA+DA KESNGEEPPESLFMKELKKRGITPTSLLEDTN+++F LG E TG N D S  S
Sbjct: 61  CAAKDADKESNGEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTGENRDFSRRS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEV+KSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 142

[Close]

BLAST of Carg08104 vs. TrEMBL
Match: tr|A0A0A0KY14|A0A0A0KY14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000570 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.8e-34
Identity = 91/146 (62.33%), Postives = 102/146 (69.86%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MAALQILKS++S  S S  +FG QS+RF ++ DS                          
Sbjct: 1   MAALQILKSSLSLPSISHSNFGSQSTRFVSDFDS----LLLHGRRRSLRYACVYRRFTFR 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
            AA+D  KE+NGEEPPESLFMKELKKRGITPTSLLEDTNS++FELG E TG N D S  S
Sbjct: 61  CAAKDTDKETNGEEPPESLFMKELKKRGITPTSLLEDTNSSDFELGGEMTGENRDFSRRS 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTEV+KSLSNQRERSMQLNSEGLE
Sbjct: 121 AVSTEVNKSLSNQRERSMQLNSEGLE 142

[Close]

BLAST of Carg08104 vs. TrEMBL
Match: tr|W9RN54|W9RN54_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003356 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.7e-22
Identity = 74/147 (50.34%), Postives = 90/147 (61.22%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA++Q LK   SP+S S+P+F      FF+E  S                          
Sbjct: 1   MASVQFLKYNPSPVSVSRPNFPGNPRWFFSE--SSLRKRVVRFGSSGGSRNYTNKRLRLF 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEAT-GGNLDLSGT 120
            AAQD  KESNGEEPPESLFMKEL++RG+TPTSL EDTN++++ L  E T       S  
Sbjct: 61  CAAQDPEKESNGEEPPESLFMKELRRRGMTPTSLREDTNTSDYGLNDETTRKEGRAFSQR 120

Query: 121 SAVSTEVSKSLSNQRERSMQLNSEGLE 147
           +AVSTEV KSLS+QRERSM+LNSEGLE
Sbjct: 121 NAVSTEVEKSLSDQRERSMKLNSEGLE 145

[Close]

BLAST of Carg08104 vs. TrEMBL
Match: tr|A0A251MY67|A0A251MY67_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G151000 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.6e-20
Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA+LQ+LKS++SP+  S  +F  +SS  F+ + S                          
Sbjct: 1   MASLQMLKSSLSPMPVSHSNFQGKSSWVFSGIQS--RKSSIRLSSYRGSGYYLRRRLRVC 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
             AQ+   +SNGEEPPESLFMKEL++RG+TPTSLLE+    E+    E    +   S  +
Sbjct: 61  CKAQEGDNKSNGEEPPESLFMKELRRRGMTPTSLLEEKERIEYGANDEMGKEDRGFSTRN 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTE+ KSL+NQRERSMQLNSEGLE
Sbjct: 121 AVSTEIEKSLANQRERSMQLNSEGLE 144

[Close]

BLAST of Carg08104 vs. TrEMBL
Match: tr|M5VKJ8|M5VKJ8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G151000 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.6e-20
Identity = 67/146 (45.89%), Postives = 87/146 (59.59%), Query Frame = 0


Query: 1   MAALQILKSTVSPLSFSQPSFGVQSSRFFTELDSXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA+LQ+LKS++SP+  S  +F  +SS  F+ + S                          
Sbjct: 1   MASLQMLKSSLSPMPVSHSNFQGKSSWVFSGIQS--RKSSIRLSSYRGSGYYLRRRLRVC 60

Query: 61  XAAQDAHKESNGEEPPESLFMKELKKRGITPTSLLEDTNSTEFELGVEATGGNLDLSGTS 120
             AQ+   +SNGEEPPESLFMKEL++RG+TPTSLLE+    E+    E    +   S  +
Sbjct: 61  CKAQEGDNKSNGEEPPESLFMKELRRRGMTPTSLLEEKERIEYGANDEMGKEDRGFSTRN 120

Query: 121 AVSTEVSKSLSNQRERSMQLNSEGLE 147
           AVSTE+ KSL+NQRERSMQLNSEGLE
Sbjct: 121 AVSTEIEKSLANQRERSMQLNSEGLE 144

The following BLAST results are available for this feature:

BLAST of Carg08104 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942490.1	4.6e-50	97.95	uncharacterized protein LOC111447509 isoform X2 [Cucurbita moschata]	[more]
XP_022942489.1	3.3e-48	81.18	uncharacterized protein LOC111447509 isoform X1 [Cucurbita moschata]	[more]
XP_023532263.1	2.8e-47	94.52	uncharacterized protein LOC111794456 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023532257.1	2.8e-47	94.52	uncharacterized protein LOC111794456 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022991987.1	1.5e-45	93.15	uncharacterized protein LOC111488465 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg08104 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50020.1	1.5e-15	55.29	unknown protein	[more]

BLAST of Carg08104 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08104 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BY38\|A0A1S3BY38_CUCME	2.7e-35	63.70	uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=...	[more]
tr\|A0A0A0KY14\|A0A0A0KY14_CUCSA	8.8e-34	62.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000570 PE=4 SV=1	[more]
tr\|W9RN54\|W9RN54_9ROSA	2.7e-22	50.34	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003356 PE=4 SV=1	[more]
tr\|A0A251MY67\|A0A251MY67_PRUPE	5.6e-20	45.89	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G151000 PE=4 SV=1	[more]
tr\|M5VKJ8\|M5VKJ8_PRUPE	5.6e-20	45.89	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G151000 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08104-RA	Carg08104-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35699	FAMILY NOT NAMED	coord: 1..146

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08104	Cla006458	Watermelon (97103) v1	carwmB0366
Carg08104	Csa4G000570	Cucumber (Chinese Long) v2	carcuB0402
Carg08104	MELO3C018026	Melon (DHL92) v3.5.1	carmeB0383
Carg08104	ClCG10G010000	Watermelon (Charleston Gray)	carwcgB0365
Carg08104	CSPI04G00080	Wild cucumber (PI 183967)	carcpiB0407
Carg08104	Cucsa.298520	Cucumber (Gy14) v1	carcgyB0439
Carg08104	CmaCh04G004300	Cucurbita maxima (Rimu)	carcmaB0529
Carg08104	CmaCh16G003040	Cucurbita maxima (Rimu)	carcmaB0526
Carg08104	CmoCh04G004610	Cucurbita moschata (Rifu)	carcmoB0514
Carg08104	CmoCh16G003220	Cucurbita moschata (Rifu)	carcmoB0509
Carg08104	Lsi03G010050	Bottle gourd (USVL1VR-Ls)	carlsiB341
Carg08104	Cp4.1LG14g04600	Cucurbita pepo (Zucchini)	carcpeB0523
Carg08104	Cp4.1LG01g02810	Cucurbita pepo (Zucchini)	carcpeB0527
Carg08104	CsGy4G000090	Cucumber (Gy14) v2	carcgybB0383
Carg08104	MELO3C018026.2	Melon (DHL92) v3.6.1	carmedB0387
Carg08104	CsaV3_4G000050	Cucumber (Chinese Long) v3	carcucB0406
Carg08104	Cla97C10G193020	Watermelon (97103) v2	carwmbB0391
Carg08104	Bhi11G000911	Wax gourd	carwgoB0456

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08104	Carg19701	Silver-seed gourd	carcarB324

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08104	Silver-seed gourd	carcarB401
Carg08104	Silver-seed gourd	carcarB402
Carg08104	Silver-seed gourd	carcarB404
Carg08104	Cucumber (Gy14) v2	carcgybB0388
Carg08104	Cucumber (Gy14) v2	carcgybB0389
Carg08104	Cucumber (Gy14) v1	carcgyB0433
Carg08104	Cucurbita maxima (Rimu)	carcmaB0528
Carg08104	Cucurbita maxima (Rimu)	carcmaB0525
Carg08104	Cucurbita moschata (Rifu)	carcmoB0508
Carg08104	Cucurbita moschata (Rifu)	carcmoB0516
Carg08104	Cucurbita pepo (Zucchini)	carcpeB0526
Carg08104	Cucurbita pepo (Zucchini)	carcpeB0529
Carg08104	Cucumber (Chinese Long) v2	carcuB0409
Carg08104	Cucumber (Chinese Long) v2	carcuB0410
Carg08104	Bottle gourd (USVL1VR-Ls)	carlsiB340
Carg08104	Melon (DHL92) v3.5.1	carmeB0386
Carg08104	Melon (DHL92) v3.6.1	carmedB0390
Carg08104	Watermelon (Charleston Gray)	carwcgB0368
Carg08104	Watermelon (97103) v1	carwmB0375
Carg08104	Watermelon (97103) v2	carwmbB0394