CmaCh14G021290 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G021290
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	oxidoreductases, acting on NADH or NADPH
Location	Cma_Chr14 : 14622596 .. 14623580 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAATATCTTCCTCCTTTCATTATGGCCGCTCGCTTTGGTCGTTCCCTGTACCGTTTCTCTTCTGTCAACCGCCCCACTGCCCCCGCCCCCCGCTATCCTTCAACGGAACCCCGACCTAGCTCGCCCACCACTGAGCCCCGTCCTGCTTCTCCACCGTCTTCTCGTCTGATCGCCTCACCCCCCAACCCCGTACACAAATACCCCAAGTATTATATTCCAGCACTAACCCTTTTCTAATATGTGTCCATTACTTATAAAAATCTTAAAACTTGTTCATATTTTGAACTCAGGTCACCCGAGCCCAAACAGAAGGCGATGGTCCACAAGGGCGTCGAGAAGGCGGCGAAGTCGGAGCGTTATCTCGATTCGGGCAGGACCCAGAAGGCGCAGCAGCCAAATGCAATAAACATCGCGGGAGAAAATGTTGGGGCGGTGATGGAAATCGTTGAGTCCTCAAAAGGGGAAGGGGGACACGTTATGAAGAAGAAAGAGACGCCGAGAGGTGTAGTGAGCAACGCCGACGACACTGTCAATGATCAAGACAAGGACGCTTCTAAACACCACAAGGCCGGCGCCCAAAAAGCACCCGCTTCCTCATCACTGCCGACAACCACTTTTCTGAACAACAATTTTCAAAGCGTAAACAATTCCCTTCTTTTCGATGCATCTTTGGCTCACCGTGACCCCGGTTTGCACCTCGCTTTCTCCCGGAACCGGACCGGCGACCGGTTCACTCTTGATGACAAGAAGCAGCACCACGCAATACACTAGAAAAAAGAAAAAAAAAATACAAATATCTATACATATATATATCTCGTTATCTTATGAGAATAAAATGAATTATGTTCTTATTTTATGTTAAAAGAGAAAAAAAATGAAAATTTTATCGTCTATGTTTGAATCTCCGTCTCGTTTCCATAAAAATAAATAAAAATTTGAGTAGAGATGAGAATGAGAAAGGTGTTTTCGTCCATGCTTGCCTC

mRNA sequence

TATAATATCTTCCTCCTTTCATTATGGCCGCTCGCTTTGGTCGTTCCCTGTACCGTTTCTCTTCTGTCAACCGCCCCACTGCCCCCGCCCCCCGCTATCCTTCAACGGAACCCCGACCTAGCTCGCCCACCACTGAGCCCCGTCCTGCTTCTCCACCGTCTTCTCGTCTGATCGCCTCACCCCCCAACCCCGTACACAAATACCCCAAGTCACCCGAGCCCAAACAGAAGGCGATGGTCCACAAGGGCGTCGAGAAGGCGGCGAAGTCGGAGCGTTATCTCGATTCGGGCAGGACCCAGAAGGCGCAGCAGCCAAATGCAATAAACATCGCGGGAGAAAATGTTGGGGCGGTGATGGAAATCGTTGAGTCCTCAAAAGGGGAAGGGGGACACGTTATGAAGAAGAAAGAGACGCCGAGAGGTGTAGTGAGCAACGCCGACGACACTGTCAATGATCAAGACAAGGACGCTTCTAAACACCACAAGGCCGGCGCCCAAAAAGCACCCGCTTCCTCATCACTGCCGACAACCACTTTTCTGAACAACAATTTTCAAAGCGTAAACAATTCCCTTCTTTTCGATGCATCTTTGGCTCACCGTGACCCCGGTTTGCACCTCGCTTTCTCCCGGAACCGGACCGGCGACCGGTTCACTCTTGATGACAAGAAGCAGCACCACGCAATACACTAGAAAAAAGAAAAAAAAAATACAAATATCTATACATATATATATCTCGTTATCTTATGAGAATAAAATGAATTATGTTCTTATTTTATGTTAAAAGAGAAAAAAAATGAAAATTTTATCGTCTATGTTTGAATCTCCGTCTCGTTTCCATAAAAATAAATAAAAATTTGAGTAGAGATGAGAATGAGAAAGGTGTTTTCGTCCATGCTTGCCTC

Coding sequence (CDS)

ATGGCCGCTCGCTTTGGTCGTTCCCTGTACCGTTTCTCTTCTGTCAACCGCCCCACTGCCCCCGCCCCCCGCTATCCTTCAACGGAACCCCGACCTAGCTCGCCCACCACTGAGCCCCGTCCTGCTTCTCCACCGTCTTCTCGTCTGATCGCCTCACCCCCCAACCCCGTACACAAATACCCCAAGTCACCCGAGCCCAAACAGAAGGCGATGGTCCACAAGGGCGTCGAGAAGGCGGCGAAGTCGGAGCGTTATCTCGATTCGGGCAGGACCCAGAAGGCGCAGCAGCCAAATGCAATAAACATCGCGGGAGAAAATGTTGGGGCGGTGATGGAAATCGTTGAGTCCTCAAAAGGGGAAGGGGGACACGTTATGAAGAAGAAAGAGACGCCGAGAGGTGTAGTGAGCAACGCCGACGACACTGTCAATGATCAAGACAAGGACGCTTCTAAACACCACAAGGCCGGCGCCCAAAAAGCACCCGCTTCCTCATCACTGCCGACAACCACTTTTCTGAACAACAATTTTCAAAGCGTAAACAATTCCCTTCTTTTCGATGCATCTTTGGCTCACCGTGACCCCGGTTTGCACCTCGCTTTCTCCCGGAACCGGACCGGCGACCGGTTCACTCTTGATGACAAGAAGCAGCACCACGCAATACACTAG

Protein sequence

MAARFGRSLYRFSSVNRPTAPAPRYPSTEPRPSSPTTEPRPASPPSSRLIASPPNPVHKYPKSPEPKQKAMVHKGVEKAAKSERYLDSGRTQKAQQPNAINIAGENVGAVMEIVESSKGEGGHVMKKKETPRGVVSNADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTFLNNNFQSVNNSLLFDASLAHRDPGLHLAFSRNRTGDRFTLDDKKQHHAIH

Homology

[Close]

BLAST of CmaCh14G021290 vs. TrEMBL
Match: A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.1e-43
Identity = 145/278 (52.16%), Postives = 170/278 (61.15%), Query Frame = 1


Query: 1   MAAR-FGRSLYRFSSVNRPTAPAP-------------RYPST------EPRPSSPTT--- 60
           MA R FGR LYRFSS NRP AP               RYPS+      EPR S P     
Sbjct: 1   MAGRNFGR-LYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALR 60

Query: 61  ---EPRPA----------SPPSS--------RLIASPPNPVHKYPK--------SPEPKQ 120
              +P PA          SPPSS        R I+SP   V +YPK        SPE KQ
Sbjct: 61  RDDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQ 120

Query: 121 K-AMVHKG-VEKAAKSERYLDSGRTQKAQ----QPNAINIAGENVGAVMEIVESSKGEGG 180
           K  + HK  VEK  KS+RY +S +T  +     QPNAINI GENVGAVMEIVESSK EGG
Sbjct: 121 KPGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGG 180

Query: 181 HVMKK-KETPRGVVSNADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTFLNNNFQSVNN 219
           H++KK KET RG+++N +D  NDQ+ +ASK        AP +SS+PT TFLN+NFQSVNN
Sbjct: 181 HMIKKIKETARGILNN-NDMANDQNNEASK--------AP-NSSMPTNTFLNSNFQSVNN 240

[Close]

BLAST of CmaCh14G021290 vs. TrEMBL
Match: A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-14
Identity = 80/211 (37.91%), Postives = 107/211 (50.71%), Query Frame = 1


Query: 16  NRPTAPAPRYPSTEPRPSSPTTEPRPASPPSSRLIASPPNPVHKYPK-SPEPKQKAMVHK 75
           N  T P      + P  +SP +   P + P S++I    N     P+  PE + K +V+ 
Sbjct: 98  NGETTPPLTPAKSRPAKTSPLS---PLALPRSQVITG--NGTTAQPRVQPEVETKGIVYN 157

Query: 76  GV--EKAAKSERYLDSGRT----QKAQQPNAINIAGENVGAVMEIVESSKGE--GGHVMK 135
               EK +KS R  + G      QK Q+P  + + G NVGAVME+ +SS G   GG  +K
Sbjct: 158 KAADEKPSKSNRQSEHGSGKSVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGETLK 217

Query: 136 KKETPRGVVSNADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTFLNNNFQSVNNSLLFD 195
           KKET        DD   D D    +  K G +K P     P + F+N+NFQSVNNSLLFD
Sbjct: 218 KKETE-------DD--GDVDGYGHEDKKTGRKKKP-----PISAFMNSNFQSVNNSLLFD 277

Query: 196 ASLAHRDPGLHLAFSRNRTGDRFTLDDKKQH 218
           +S  HRDPGLHL+F     G    +D  K +
Sbjct: 278 SSCQHRDPGLHLSFPNAADGGGAVVDGDKSY 289

[Close]

BLAST of CmaCh14G021290 vs. TrEMBL
Match: A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.9e-12
Identity = 74/224 (33.04%), Postives = 112/224 (50.00%), Query Frame = 1


Query: 11  RFSSVNRPTAPAPRYPSTEPRPSSPTTEPRPASPPSSRLIASPPNPVHKYPKS------- 70
           R S+   P    P + S  P PS P     P +      +A P + V + P+        
Sbjct: 104 RTSATTSPKTFKPTHISPPPSPSKPRHSTVPTAVAPLSPLALPRSQVRREPEHSLRPRSP 163

Query: 71  PEPKQKAMVHKGV--EKAAKSERYLDSGR------TQKAQ----QPNAINIAGENVGAVM 130
           PE +QK ++++    EK  K++ Y  +         QK Q    Q + INI GENVGAVM
Sbjct: 164 PEIEQKKILYQTTTTEKPTKTDHYRQNDEYGASKPQQKQQHQQLQSDVINIKGENVGAVM 223

Query: 131 EIVESSKGEGGHVMKKKETPRGVVSNADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTF 190
            I +SS  +G  V+KKK T           V    ++  K +K+       +S+ P  +F
Sbjct: 224 HITQSS--DGSEVIKKKPT-----------VGQSKENEEKTNKS-------NSNYPGKSF 283

Query: 191 LNNNFQSVNNSLLFDASLAHRDPGLHLAFSRNRTGDRFTLDDKK 216
           +N+NFQ VNNS+L+++SL+HRDPGLHLAF   ++    ++ D +
Sbjct: 284 MNSNFQGVNNSILYNSSLSHRDPGLHLAFGSKKSKHGDSIHDSR 307

[Close]

BLAST of CmaCh14G021290 vs. TrEMBL
Match: W9RNX6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023460 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.1e-11
Identity = 66/218 (30.28%), Postives = 102/218 (46.79%), Query Frame = 1


Query: 17  RPTAPAPRYPSTEPRPSS-PTTEPRPASPPSSRLIASPPNPV----------HKYPKSPE 76
           +P AP    P   P P + PT++ R  + P +R+ A                  +  S E
Sbjct: 261 KPPAPQTTSPGRPPSPLTLPTSQLRSNAEPEARIPAEAEQKTVLVQRTIEKPRPWLGSGE 320

Query: 77  PKQKAMVHKGVEKAAKSERYLDSGRTQKAQQ--PNAINIAGENVGAVMEIVESSK--GEG 136
           P+Q    H         E+     +   ++      I +AGEN GA+ME+++S    GE 
Sbjct: 321 PRQTGTHHISTTGIKPKEKLGGDKKPSDSEDIGMRIITLAGENKGALMELIKSPNKTGER 380

Query: 137 GHVMKKKETPRGVVSNADDTVN-DQDKDASKHHKAGAQKAPASSSLPTTTFLNNNFQSVN 196
              + K  T R V S+  +  + D D D  K  K  +QK  A + LP T F+N+N Q +N
Sbjct: 381 SRYLHKNGTGRVVGSDGKNAAHSDSDSDDGKAKKDKSQKGKAKNGLPMTAFMNSNVQGIN 440

Query: 197 NSLLFDASLAHRDPGLHLAFSRNRTGDRFTLDDKKQHH 219
           NS+++++S  H DPG+HLA +R   G  F + D+   H
Sbjct: 441 NSIMYNSSCTHHDPGVHLALTRKPNGSGFQVKDRVTGH 478

[Close]

BLAST of CmaCh14G021290 vs. TrEMBL
Match: M5XHL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024582mg PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.6e-10
Identity = 67/209 (32.06%), Postives = 95/209 (45.45%), Query Frame = 1


Query: 22  APRYPSTEPRPSSPTTEPRPASPPSSRLIASPPNPVHKYPKSPEPKQKA--MVHKGV--E 81
           +P+  S  P PS  T  P    P +S     P  P+    K+  P   A    H+G   E
Sbjct: 257 SPKIKSIAPPPSPFTLPPPQLKPSTSDQTEQPRIPMEAEQKTVLPSINAHGSKHEGETKE 316

Query: 82  KAAKSERYLDSGRTQKAQQPNAINIAGENVGAVMEIVESSK----GEGGHVMKKKETPRG 141
           +A   ++        +A     I IAGEN GA ME+ +S +    GE    + KK   + 
Sbjct: 317 RAITRKKPASDTSDHEAGGMRVITIAGENRGAFMELKQSPQKHGLGEQSQYLCKKGNGKT 376

Query: 142 VVSNADDTVNDQDKDAS-------------KHHKAGAQKAPASSSLPTTTFLNNNFQSVN 201
           V     D  N     +S             K  KAG     ++S+ PT  F+N+N Q +N
Sbjct: 377 VTGTQSDQNNSSSSSSSSGEEGKGKSKSKDKSLKAGKAAGKSASAQPTRAFMNSNVQGIN 436

Query: 202 NSLLFDASLAHRDPGLHLAFSRNRTGDRF 210
           NS++++ SL H DPG+HLAFSR  +GD F
Sbjct: 437 NSIVYNTSLTHHDPGVHLAFSRKPSGDGF 465

[Close]

BLAST of CmaCh14G021290 vs. TAIR10
Match: AT2G46630.1 (AT2G46630.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 49/161 (30.43%), Postives = 76/161 (47.20%), Query Frame = 1


Query: 55  NPVHKYPKSPEPKQKAMVHKGVEKAAKSERYLDSGRTQKAQQPNAINIAGENVGAVMEIV 114
           N  H Y ++    Q    H+G     K  R   S  ++       I IAGEN GAVMEI+
Sbjct: 222 NQNHNYNQNHSYNQNQN-HQG-NNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEIL 281

Query: 115 ESSKGE--GGHVMKKKETPRGV------VSNADDTVNDQDKDASKHHKAGAQKAPASSSL 174
            S +G   GG          G       + ++  + +D+ +   K  K    K   +S+L
Sbjct: 282 RSPQGNKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKG--NSNL 341

Query: 175 PTTTFLNNNFQSVNNSLLFDASLAHRDPGLHLAFSRNRTGD 208
           P   F+N+N Q +NNS++++++ +H DPG+HL  SR    D
Sbjct: 342 PMKAFMNSNVQMINNSIVYNSTASHHDPGVHLKISRKPGSD 378

[Close]

BLAST of CmaCh14G021290 vs. NCBI nr
Match: gi|659074886|ref|XP_008437848.1| (PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 1.9e-46
Identity = 143/277 (51.62%), Postives = 173/277 (62.45%), Query Frame = 1


Query: 1   MAAR-FGRSLYRFSSVNRPTAPAP-------------RYPST------EPR--------- 60
           MA R FGR +YRFSS NRP APA              +YPS       EPR         
Sbjct: 1   MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60

Query: 61  ------PSSPT------TEPRPASPP----SSRLIASPPNPVHKYPK--------SPEPK 120
                 P+SPT      T P P+SPP    ++R I+SPP  V +YPK        SPE K
Sbjct: 61  KDDPPLPASPTYSIKKATSP-PSSPPYRGMAAREISSPPKMVDEYPKYKPITQPRSPEAK 120

Query: 121 QKAMVHKG--VEKAAKSERYLDSGR---TQKAQQPNAINIAGENVGAVMEIVESSKGEGG 180
           QK  +HK   VEK  KS+RY +  +   + K QQPNAINI GENVGAVMEIVESSK EGG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180

Query: 181 HVMKK-KETPRGVVSNADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTFLNNNFQSVNN 219
           H++KK KET RG+++N +D  NDQ+ +ASK           +SS+PT TFLN+NFQSVNN
Sbjct: 181 HMIKKIKETARGILNN-NDMANDQNNEASK---------TTNSSMPTNTFLNSNFQSVNN 240

[Close]

BLAST of CmaCh14G021290 vs. NCBI nr
Match: gi|449432014|ref|XP_004133795.1| (PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 5.9e-43
Identity = 145/278 (52.16%), Postives = 170/278 (61.15%), Query Frame = 1


Query: 1   MAAR-FGRSLYRFSSVNRPTAPAP-------------RYPST------EPRPSSPTT--- 60
           MA R FGR LYRFSS NRP AP               RYPS+      EPR S P     
Sbjct: 1   MAGRNFGR-LYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALR 60

Query: 61  ---EPRPA----------SPPSS--------RLIASPPNPVHKYPK--------SPEPKQ 120
              +P PA          SPPSS        R I+SP   V +YPK        SPE KQ
Sbjct: 61  RDDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQ 120

Query: 121 K-AMVHKG-VEKAAKSERYLDSGRTQKAQ----QPNAINIAGENVGAVMEIVESSKGEGG 180
           K  + HK  VEK  KS+RY +S +T  +     QPNAINI GENVGAVMEIVESSK EGG
Sbjct: 121 KPGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGG 180

Query: 181 HVMKK-KETPRGVVSNADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTFLNNNFQSVNN 219
           H++KK KET RG+++N +D  NDQ+ +ASK        AP +SS+PT TFLN+NFQSVNN
Sbjct: 181 HMIKKIKETARGILNN-NDMANDQNNEASK--------AP-NSSMPTNTFLNSNFQSVNN 240

[Close]

BLAST of CmaCh14G021290 vs. NCBI nr
Match: gi|659074890|ref|XP_008437851.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 85/200 (42.50%), Postives = 106/200 (53.00%), Query Frame = 1


Query: 32  PSSPTTEPRPASPPSSRLIASPPNPVHK------YPK-SPEPKQKAMVH-KGVEKAAKSE 91
           P SP    R  +PP S L A P N V         P+  PE + K +V+ K VEK +KS 
Sbjct: 112 PLSPAKSRRAKTPPLSPL-ALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSN 171

Query: 92  R----YLDSGRTQKAQQPNAINIAGENVGAVMEIVESSKGE--GGHVMKKKETPRGVVSN 151
           R    Y  S   QK Q+P  I + G NVGAVMEI +SS G   GG  +KK ET    V +
Sbjct: 172 RSSGEYGSSKSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETED--VGD 231

Query: 152 ADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTFLNNNFQSVNNSLLFDASLAHRDPGLH 211
                ++  K  +K      +K P     P T F+N+NFQSVNNSLLFD+S  HRDPGLH
Sbjct: 232 VHGYGHEDKKTETK------KKEP-----PITAFMNSNFQSVNNSLLFDSSCNHRDPGLH 291

Query: 212 LAFSRNRTGDRFTLDDKKQH 218
           LAF     GD   +D +K +
Sbjct: 292 LAFPDAVDGDGAIVDGQKSY 297

[Close]

BLAST of CmaCh14G021290 vs. NCBI nr
Match: gi|449432018|ref|XP_004133797.1| (PREDICTED: atherin-like [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 80/211 (37.91%), Postives = 107/211 (50.71%), Query Frame = 1


Query: 16  NRPTAPAPRYPSTEPRPSSPTTEPRPASPPSSRLIASPPNPVHKYPK-SPEPKQKAMVHK 75
           N  T P      + P  +SP +   P + P S++I    N     P+  PE + K +V+ 
Sbjct: 98  NGETTPPLTPAKSRPAKTSPLS---PLALPRSQVITG--NGTTAQPRVQPEVETKGIVYN 157

Query: 76  GV--EKAAKSERYLDSGRT----QKAQQPNAINIAGENVGAVMEIVESSKGE--GGHVMK 135
               EK +KS R  + G      QK Q+P  + + G NVGAVME+ +SS G   GG  +K
Sbjct: 158 KAADEKPSKSNRQSEHGSGKSVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGETLK 217

Query: 136 KKETPRGVVSNADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTFLNNNFQSVNNSLLFD 195
           KKET        DD   D D    +  K G +K P     P + F+N+NFQSVNNSLLFD
Sbjct: 218 KKETE-------DD--GDVDGYGHEDKKTGRKKKP-----PISAFMNSNFQSVNNSLLFD 277

Query: 196 ASLAHRDPGLHLAFSRNRTGDRFTLDDKKQH 218
           +S  HRDPGLHL+F     G    +D  K +
Sbjct: 278 SSCQHRDPGLHLSFPNAADGGGAVVDGDKSY 289

[Close]

BLAST of CmaCh14G021290 vs. NCBI nr
Match: gi|694412090|ref|XP_009334381.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Pyrus x bretschneideri])

HSP 1 Score: 87.8 bits (216), Expect = 2.6e-14
Identity = 59/173 (34.10%), Postives = 94/173 (54.34%), Query Frame = 1


Query: 60  YPKSPEPKQKAMVHKGVEKAAK---SERYLDSGRTQKAQQPNAINIAGENVGAVMEIVES 119
           + +SP+P  K++  K   +  +   S +   S    +A     I +AGEN GA+ME+++S
Sbjct: 301 FRESPKPSNKSLSSKNEGETKERLISHKKSPSSSDHEAAGMRVITVAGENRGALMELIKS 360

Query: 120 SK----GEGGHVMKKKETPRGVVSNADDTVNDQDKDASKH------HKAGAQKAPASSSL 179
            K    GE  H + KK   + ++ N  D  +    +  KH      H+AG     A++S 
Sbjct: 361 PKKHGSGEHSHHIHKKGNGKTLMGNQSDQSSYSGSEEGKHKSKDKIHRAGK----AAASK 420

Query: 180 PTTTFLNNNFQSVNNSLLFDASLAHRDPGLHLAFSRNRTGDRFTLDDKKQHHA 220
           PT+ F+N+N Q +NNS+++++SL H DPG+HLAFS    G+ F   + K HHA
Sbjct: 421 PTSAFMNSNVQGINNSIVYNSSLTHHDPGVHLAFSGKPNGEGF---EAKSHHA 466

The following BLAST results are available for this feature:

BLAST of CmaCh14G021290 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh14G021290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3R5_CUCSA	4.1e-43	52.16	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1	[more]
A0A0A0L320_CUCSA	1.0e-14	37.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1	[more]
A0A0A0L5T3_CUCSA	2.9e-12	33.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1	[more]
W9RNX6_9ROSA	4.1e-11	30.28	Uncharacterized protein OS=Morus notabilis GN=L484_023460 PE=4 SV=1	[more]
M5XHL9_PRUPE	4.6e-10	32.06	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024582mg PE=4 SV=1	[more]

BLAST of CmaCh14G021290 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46630.1	1.5e-09	30.43	unknown protein	[more]

BLAST of CmaCh14G021290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074886\|ref\|XP_008437848.1\|	1.9e-46	51.62	PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis melo]	[more]
gi\|449432014\|ref\|XP_004133795.1\|	5.9e-43	52.16	PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus]	[more]
gi\|659074890\|ref\|XP_008437851.1\|	1.8e-15	42.50	PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo]	[more]
gi\|449432018\|ref\|XP_004133797.1\|	1.5e-14	37.91	PREDICTED: atherin-like [Cucumis sativus]	[more]
gi\|694412090\|ref\|XP_009334381.1\|	2.6e-14	34.10	PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Pyrus x ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G021290.1	CmaCh14G021290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33472	FAMILY NOT NAMED	coord: 100..213 score: 2.9
None	No IPR available	PANTHER	PTHR33472:SF1	EXTENSIN-RELATED	coord: 100..213 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G021290	Cucsa.259500	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G021290	Cla021125	Watermelon (97103) v1	cmawmB242
CmaCh14G021290	Csa3G119280	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G021290	MELO3C005995	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G021290	ClCG05G000580	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G021290	CSPI03G07650	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G021290	CmoCh06G010180	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G021290	CmoCh14G021910	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G021290	Lsi05G021560	Bottle gourd (USVL1VR-Ls)	cmalsiB245
CmaCh14G021290	Cp4.1LG03g15870	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G021290	Cp4.1LG08g00640	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G021290	MELO3C005995.2	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G021290	CsaV3_3G007790	Cucumber (Chinese Long) v3	cmacucB0291
CmaCh14G021290	Cla97C05G080630	Watermelon (97103) v2	cmawmbB263
CmaCh14G021290	Bhi01G000384	Wax gourd	cmawgoB0315
CmaCh14G021290	CsGy3G007790	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G021290	Carg20912	Silver-seed gourd	carcmaB1373
CmaCh14G021290	Carg25713	Silver-seed gourd	carcmaB0162

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G021290	CmaCh06G009860	Cucurbita maxima (Rimu)	cmacmaB281

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G021290	Silver-seed gourd	carcmaB1364
CmaCh14G021290	Cucumber (Chinese Long) v3	cmacucB0305
CmaCh14G021290	Watermelon (97103) v2	cmawmbB247
CmaCh14G021290	Wax gourd	cmawgoB0308
CmaCh14G021290	Cucurbita maxima (Rimu)	cmacmaB243
CmaCh14G021290	Cucurbita maxima (Rimu)	cmacmaB263
CmaCh14G021290	Cucurbita moschata (Rifu)	cmacmoB260
CmaCh14G021290	Cucurbita pepo (Zucchini)	cmacpeB291
CmaCh14G021290	Bottle gourd (USVL1VR-Ls)	cmalsiB226