Cp4.1LG08g00640 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g00640
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBnaA05g01230D protein
LocationCp4.1LG08 : 4009915 .. 4011102 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCATATTTTATTTGGATTTTCATTTTCTTAGCTACCAAAACAATATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCTGCACAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAACAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGGTCGCTGCGAACATCGCCGCCGCCACCGCCACCTCTCGCTCTGCCGCCTACCCATTTCACCGCCGTTAATGGGACCACCACTCAACGAGGGTATTAAATTACCTAAAAAAAAACTTAATAATTAAGCTTAATTAATTTTAATTTCAAACCATTTATGTTTGAAATTAGAGCAATAAATTGATACAAGATATTTGATTTATTTAAAAGAAATATTTATTTATATGATCAATAACAGAATTCAGCCCGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAAGCCGGTTGACCGGCCGTCGGAGTATGGCTCGGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGTCTATAAACCTCGCCGGACATAATGTCGGCGCAGTCATGGAAATAGATAAGTCGTCAGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGACGTCGGCCGGGATGGAAATGAGGAGAAGAAAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAGGAAAAGAAAGAGAAGAAAGTGCCGATGACTGCATTTATGAATAGCAATTTTCAGAGTGTAAACAATTCTGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGGCGTAAGAGTTACAAGGAATAGAGATGATGGCTTGTGAAGTATTTAATTATAAGAAATAAGCCATTTACTTGGCGTTTAAAAAAAAAAAGAAGAAAAGCCATTTACTTGGACTCTTACTTAAGATTATAATCGATATCAATAAAAATATA

mRNA sequence

TTCATATTTTATTTGGATTTTCATTTTCTTAGCTACCAAAACAATATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCTGCACAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAACAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGGTCGCTGCGAACATCGCCGCCGCCACCGCCACCTCTCGCTCTGCCGCCTACCCATTTCACCGCCGTTAATGGGACCACCACTCAACGAGGAATTCAGCCCGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAAGCCGGTTGACCGGCCGTCGGAGTATGGCTCGGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGTCTATAAACCTCGCCGGACATAATGTCGGCGCAGTCATGGAAATAGATAAGTCGTCAGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGACGTCGGCCGGGATGGAAATGAGGAGAAGAAAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAGGAAAAGAAAGAGAAGAAAGTGCCGATGACTGCATTTATGAATAGCAATTTTCAGAGTGTAAACAATTCTGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGGCGTAAGAGTTACAAGGAATAGAGATGATGGCTTGTGAAGTATTTAATTATAAGAAATAAGCCATTTACTTGGCGTTTAAAAAAAAAAAGAAGAAAAGCCATTTACTTGGACTCTTACTTAAGATTATAATCGATATCAATAAAAATATA

Coding sequence (CDS)

ATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCTGCACAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAACAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGGTCGCTGCGAACATCGCCGCCGCCACCGCCACCTCTCGCTCTGCCGCCTACCCATTTCACCGCCGTTAATGGGACCACCACTCAACGAGGAATTCAGCCCGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAAGCCGGTTGACCGGCCGTCGGAGTATGGCTCGGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGTCTATAAACCTCGCCGGACATAATGTCGGCGCAGTCATGGAAATAGATAAGTCGTCAGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGACGTCGGCCGGGATGGAAATGAGGAGAAGAAAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAGGAAAAGAAAGAGAAGAAAGTGCCGATGACTGCATTTATGAATAGCAATTTTCAGAGTGTAAACAATTCTGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGGCGTAAGAGTTACAAGGAATAG

Protein sequence

MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAEKPTSPIASPKYGPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTHFTAVNGTTTQRGIQPEVEKKSIVYNKTVEKPVDRPSEYGSGKPHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGDVGRDGNEEKKKEEKKKKEKKEKKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKE
Homology
[Close]
BLAST of Cp4.1LG08g00640 vs. TrEMBL
Match: A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.3e-52
Identity = 150/300 (50.00%), Postives = 186/300 (62.00%), Query Frame = 1 

Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAE---KPTSPIAS 60
           M+N PR G +RQR S   PPV     PA + K ET P+     +  PA    +   P++S
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEPKYETMPYATSITTPAPASPRRESPRPLSS 60

Query: 61  PKY---GPSVTRVPSPPPPKDELSPPVSPANKYPDRLS-QTSPLQSPSRSLRTSPPPPPP 120
           P      P  +RV S P  K   SPP S  +KY +R + +T+P  +P++S      P  P
Sbjct: 61  PSKKATSPFASRVDSSPAAKATRSPPDSIGDKYLERRNGETTPPLTPAKSRPAKTSPLSP 120

Query: 121 LALPPTHFTAVNGTTTQRGIQPEVEKKSIVYNKTV-EKPV--DRPSEYGSGKP-HEKQKA 180
           LALP +     NGTT Q  +QPEVE K IVYNK   EKP   +R SE+GSGK  H+KQ+ 
Sbjct: 121 LALPRSQVITGNGTTAQPRVQPEVETKGIVYNKAADEKPSKSNRQSEHGSGKSVHQKQQK 180

Query: 181 AESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEG-GDVGRDGNEEKKKEEKKKKEK 240
              + L GHNVGAVME++KSS G+RLGGET++K ETE  GDV   G+E+KK   KKK   
Sbjct: 181 PGVMKLKGHNVGAVMEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKKTGRKKKP-- 240

Query: 241 KEKKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYK 289
                   P++AFMNSNFQSVNNS+L+DSSC HRDPGLHL F +AADG GA VDG KSYK
Sbjct: 241 --------PISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLSFPNAADGGGAVVDGDKSYK 290

[Close]
BLAST of Cp4.1LG08g00640 vs. TrEMBL
Match: A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21
Identity = 117/307 (38.11%), Postives = 154/307 (50.16%), Query Frame = 1 

Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAE----------- 60
           M+N PR+G  R R S  +      T    + +PE  P     Q+LQP E           
Sbjct: 1   MANLPRYG-RRWRLSTVSRLAPTATQSVQEPEPEILPLAPTIQTLQPFEPTPPAAAAPPS 60

Query: 61  ----KPTS----PIASPKYGPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPS 120
               +PT     P ASPKY  +V R  SPP  K   SPPVSP  K  D     SP  S  
Sbjct: 61  STPGEPTPRISPPAASPKYEATVIREASPPL-KPARSPPVSPPRKSVDPRHSISP-NSYQ 120

Query: 121 RSLRTSPPPPPPLALPPTHFTAVNGTTTQRGIQPEVEKKSIVYNKTVEKPVDRPSEYGSG 180
             L+ + P    LALP +     + TT    I+PEVE+K+  + K+     DR  +  S 
Sbjct: 121 EPLKPTRPSLSTLALPKS----ADVTTVPSAIKPEVEQKTDSFKKS-----DRQVDNVSA 180

Query: 181 KPHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGDVGRDGNEEKKKE 240
           KP    +A ++INL G N+GAVM+I++ S     GGE  RK ET+ G             
Sbjct: 181 KPPPSLQA-KAINLTGDNIGAVMKINQFS-DKISGGEVTRKIETKTG------------V 240

Query: 241 EKKKKEKKEKKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAV 289
           +++   +K ++E + PMT   NSNFQ VNNSV+Y+SSCS RDPGLHL F+   D + A V
Sbjct: 241 QQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLHLDFSGQKD-EAATV 280

[Close]
BLAST of Cp4.1LG08g00640 vs. TrEMBL
Match: A0A067HFA4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011479mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.1e-15
Identity = 105/322 (32.61%), Postives = 145/322 (45.03%), Query Frame = 1 

Query: 2   SNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAEK----PTSPIAS 61
           + FP    S  +P+    PV+ T+ P    KP    F   +   +PA      PTSP A 
Sbjct: 164 TTFPGITRSPPKPAPTVFPVITTSPP----KPAPTTFRVPTSPPKPAPSTFSVPTSP-AK 223

Query: 62  PKYGPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALP 121
           PK   +     +  PP+     PV P       LS  +P QSP +  + + PPP PL LP
Sbjct: 224 PKPAVTAAISTTTSPPRVPSPAPVGPRTL----LSDGTPPQSPYK--KATAPPPSPLTLP 283

Query: 122 PTHFTAVNGTTTQRGIQPEVEKKSIVYNKTVEKP-------------VDRPSEYG----- 181
           P  FT  +   TQ  I  E E+K+++     EKP               +PS Y      
Sbjct: 284 PPQFT--SKAETQPTIPAETEQKTVLVQTRSEKPKSWFNGTGNHFDETHKPSSYAHRGNH 343

Query: 182 --------SGKPHEKQKAAES-------INLAGHNVGAVMEIDKSSVGHRLGG--ETVRK 241
                   +GK H KQ +++S       I +AG N GA ME+ +S + H   G   T+  
Sbjct: 344 EVHKEVAKNGKVHRKQFSSDSDEVGMRVITIAGENKGAFMEVIRSPLKHTFDGTPHTLHN 403

Query: 242 N---ETEGGDVGRDGNEEKKKEEKKKKEKKEKKEKKV---PMTAFMNSNFQSVNNSVLYD 279
               +T+    G         EEK KK+K  K +  +   PM AFMNSN Q VNNS+++ 
Sbjct: 404 KGSLKTQSDGTGWHSFSSSSDEEKSKKDKNYKAKAAMLPPPMGAFMNSNVQGVNNSIVFH 463

[Close]
BLAST of Cp4.1LG08g00640 vs. TrEMBL
Match: V4U762_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019915mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.1e-15
Identity = 105/322 (32.61%), Postives = 145/322 (45.03%), Query Frame = 1 

Query: 2   SNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAEK----PTSPIAS 61
           + FP    S  +P+    PV+ T+ P    KP    F   +   +PA      PTSP A 
Sbjct: 164 TTFPGITRSPPKPAPTVFPVITTSPP----KPAPTTFRVPTSPPKPAPSTFSVPTSP-AK 223

Query: 62  PKYGPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALP 121
           PK   +     +  PP+     PV P       LS  +P QSP +  + + PPP PL LP
Sbjct: 224 PKPAVTAAISTTTSPPRVPSPAPVGPRTL----LSDGTPPQSPYK--KATAPPPSPLTLP 283

Query: 122 PTHFTAVNGTTTQRGIQPEVEKKSIVYNKTVEKP-------------VDRPSEYG----- 181
           P  FT  +   TQ  I  E E+K+++     EKP               +PS Y      
Sbjct: 284 PPQFT--SKAETQPTIPAETEQKTVLVQTRSEKPKSWFNGTGNHFDETHKPSSYAHRGNH 343

Query: 182 --------SGKPHEKQKAAES-------INLAGHNVGAVMEIDKSSVGHRLGG--ETVRK 241
                   +GK H KQ +++S       I +AG N GA ME+ +S + H   G   T+  
Sbjct: 344 EVHKEVAKNGKVHRKQFSSDSDEVGMRVITIAGENKGAFMEVIRSPLKHTFDGTPHTLHN 403

Query: 242 N---ETEGGDVGRDGNEEKKKEEKKKKEKKEKKEKKV---PMTAFMNSNFQSVNNSVLYD 279
               +T+    G         EEK KK+K  K +  +   PM AFMNSN Q VNNS+++ 
Sbjct: 404 KGSLKTQSDGTGWHSFSSSSDEEKSKKDKNYKAKAAMLPPPMGAFMNSNVQGVNNSIVFH 463

[Close]
BLAST of Cp4.1LG08g00640 vs. TrEMBL
Match: A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.3e-14
Identity = 105/334 (31.44%), Postives = 141/334 (42.22%), Query Frame = 1 

Query: 1   MSNFPRFGL------SRQRPSMAA------------PPVLPTTLPAAQL----------- 60
           MSN PRFG       S  RP  A             P V P+ +P               
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQPFTAATEPEVFPSAVPTTNTFQTSPIKQRTP 60

Query: 61  ----------KPETQPFYKRSQSLQPAEKPTSPIASPKYGPSVTRVPSPPPPKD----EL 120
                      P + P Y  + ++ P  KP SP           R  +   PK      +
Sbjct: 61  RLSSPVKKFSSPPSSPKYSGAGTVSP-RKPLSPPPVHNRYEGERRTSATTSPKTFKPTHI 120

Query: 121 SPPVSPANKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTHFTAVNGTTTQRGIQPEV 180
           SPP SP+           P  S   ++ T+  P  PLALP +        + +    PE+
Sbjct: 121 SPPPSPSK----------PRHS---TVPTAVAPLSPLALPRSQVRREPEHSLRPRSPPEI 180

Query: 181 EKKSIVYNKTV-EKPVD-----RPSEYGSGKPHEKQK----AAESINLAGHNVGAVMEID 240
           E+K I+Y  T  EKP       +  EYG+ KP +KQ+     ++ IN+ G NVGAVM I 
Sbjct: 181 EQKKILYQTTTTEKPTKTDHYRQNDEYGASKPQQKQQHQQLQSDVINIKGENVGAVMHIT 240

Query: 241 KSSVGHRLGGETVRKNETEGGDVGRDGNEEKKKEEKKKKEKKEKKEKKVPMTAFMNSNFQ 282
           +SS G     E ++K  T G             + K+ +EK  K     P  +FMNSNFQ
Sbjct: 241 QSSDG----SEVIKKKPTVG-------------QSKENEEKTNKSNSNYPGKSFMNSNFQ 300

[Close]
BLAST of Cp4.1LG08g00640 vs. TAIR10
Match: AT2G46630.1 (AT2G46630.1 unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 9.1e-10
Identity = 97/332 (29.22%), Postives = 133/332 (40.06%), Query Frame = 1 

Query: 5   PRFGLSRQRPSMAAPPVLPTT-----LPAAQLKPETQPFYKRSQSLQPAEKPTSPIASPK 64
           PR    R  P    PP  P        P  Q  P T P  +RS    P  +  SP   PK
Sbjct: 49  PRQRQPRSPPRQQDPPSPPRQQQQPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPK 108

Query: 65  YGP--------SVTRVPSPP------PPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLR 124
                      S T  PSP       PP+   SPP SPA+      S++   +SPS S  
Sbjct: 109 AATPPPPPPRSSYTSPPSPKEVQEALPPRKPNSPP-SPAHSSRSTTSESVKTRSPSESEN 168

Query: 125 TSPPPPPPLALP---PTHFTAVNGTTTQRGIQPEVEKKSIVY-----NKTVEKPVDRPSE 184
               P P +  P   P         TTQ+ I    EK S  +     N+      ++   
Sbjct: 169 HRKAPSPRVLSPYSLPASLLHSERETTQKNILT-AEKTSQTHETNHHNQNHNHDYNQNHN 228

Query: 185 YGSG---------------KPHEKQKAAES--------INLAGHNVGAVMEIDKSSVGHR 244
           Y                  K H +  +++S        I +AG N GAVMEI +S  G++
Sbjct: 229 YNQNHSYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQGNK 288

Query: 245 LGGETVRKNETEGG--DVGR-------DGNEEKKKEEKKKKEKKEKKEKKVPMTAFMNSN 278
            GG     +    G  + GR         ++E + ++K  K    K    +PM AFMNSN
Sbjct: 289 TGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMKAFMNSN 348

[Close]
BLAST of Cp4.1LG08g00640 vs. NCBI nr
Match: gi|659074890|ref|XP_008437851.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 1.1e-62
Identity = 166/307 (54.07%), Postives = 199/307 (64.82%), Query Frame = 1 

Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYK----------RSQSLQPAEK 60
           M+N PRFG +RQR     PPV     PA + + +  PF            R +S +P   
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  P----TSPIASPKYGPSVTRVPSPPPPKDELSPPVSPANKYPDRLS-QTSPLQSPSRSLR 120
           P    TSP ASPKYG S TR+   P  K  +SPP S  +KY +R + +T+P  SP++S R
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 TSPPPPPPLALPPTHFTAVNGTTTQRGIQPEVEKKSIVYNKTVEKPV--DRPS-EYGSGK 180
              PP  PLALP       NGTT Q  +QPEVE K IVYNKTVEKP   +R S EYGS K
Sbjct: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180

Query: 181 PHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEG-GDVGRDGNEEKKKE 240
            H+K++  E I L GHNVGAVMEI+KSS G+RLGGET++KNETE  GDV   G+E+KK E
Sbjct: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTE 240

Query: 241 EKKKKEKKEKKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAV 289
            KKK+          P+TAFMNSNFQSVNNS+L+DSSC+HRDPGLHL F DA DGDGA V
Sbjct: 241 TKKKEP---------PITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIV 298

[Close]
BLAST of Cp4.1LG08g00640 vs. NCBI nr
Match: gi|449432018|ref|XP_004133797.1| (PREDICTED: atherin-like [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 9.0e-52
Identity = 150/300 (50.00%), Postives = 186/300 (62.00%), Query Frame = 1 

Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAE---KPTSPIAS 60
           M+N PR G +RQR S   PPV     PA + K ET P+     +  PA    +   P++S
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEPKYETMPYATSITTPAPASPRRESPRPLSS 60

Query: 61  PKY---GPSVTRVPSPPPPKDELSPPVSPANKYPDRLS-QTSPLQSPSRSLRTSPPPPPP 120
           P      P  +RV S P  K   SPP S  +KY +R + +T+P  +P++S      P  P
Sbjct: 61  PSKKATSPFASRVDSSPAAKATRSPPDSIGDKYLERRNGETTPPLTPAKSRPAKTSPLSP 120

Query: 121 LALPPTHFTAVNGTTTQRGIQPEVEKKSIVYNKTV-EKPV--DRPSEYGSGKP-HEKQKA 180
           LALP +     NGTT Q  +QPEVE K IVYNK   EKP   +R SE+GSGK  H+KQ+ 
Sbjct: 121 LALPRSQVITGNGTTAQPRVQPEVETKGIVYNKAADEKPSKSNRQSEHGSGKSVHQKQQK 180

Query: 181 AESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEG-GDVGRDGNEEKKKEEKKKKEK 240
              + L GHNVGAVME++KSS G+RLGGET++K ETE  GDV   G+E+KK   KKK   
Sbjct: 181 PGVMKLKGHNVGAVMEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKKTGRKKKP-- 240

Query: 241 KEKKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYK 289
                   P++AFMNSNFQSVNNS+L+DSSC HRDPGLHL F +AADG GA VDG KSYK
Sbjct: 241 --------PISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLSFPNAADGGGAVVDGDKSYK 290

[Close]
BLAST of Cp4.1LG08g00640 vs. NCBI nr
Match: gi|778676797|ref|XP_011650663.1| (PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 2.2e-21
Identity = 117/307 (38.11%), Postives = 154/307 (50.16%), Query Frame = 1 

Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAE----------- 60
           M+N PR+G  R R S  +      T    + +PE  P     Q+LQP E           
Sbjct: 1   MANLPRYG-RRWRLSTVSRLAPTATQSVQEPEPEILPLAPTIQTLQPFEPTPPAAAAPPS 60

Query: 61  ----KPTS----PIASPKYGPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPS 120
               +PT     P ASPKY  +V R  SPP  K   SPPVSP  K  D     SP  S  
Sbjct: 61  STPGEPTPRISPPAASPKYEATVIREASPPL-KPARSPPVSPPRKSVDPRHSISP-NSYQ 120

Query: 121 RSLRTSPPPPPPLALPPTHFTAVNGTTTQRGIQPEVEKKSIVYNKTVEKPVDRPSEYGSG 180
             L+ + P    LALP +     + TT    I+PEVE+K+  + K+     DR  +  S 
Sbjct: 121 EPLKPTRPSLSTLALPKS----ADVTTVPSAIKPEVEQKTDSFKKS-----DRQVDNVSA 180

Query: 181 KPHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGDVGRDGNEEKKKE 240
           KP    +A ++INL G N+GAVM+I++ S     GGE  RK ET+ G             
Sbjct: 181 KPPPSLQA-KAINLTGDNIGAVMKINQFS-DKISGGEVTRKIETKTG------------V 240

Query: 241 EKKKKEKKEKKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAV 289
           +++   +K ++E + PMT   NSNFQ VNNSV+Y+SSCS RDPGLHL F+   D + A V
Sbjct: 241 QQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLHLDFSGQKD-EAATV 280

[Close]
BLAST of Cp4.1LG08g00640 vs. NCBI nr
Match: gi|659074895|ref|XP_008437853.1| (PREDICTED: proline-rich extensin-like protein EPR1 [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 5.0e-18
Identity = 96/233 (41.20%), Postives = 126/233 (54.08%), Query Frame = 1 

Query: 47  PAEKPTSPIASPKYGPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLRT 106
           P+ + + P ASPKY  +V    SPP  K   SPPVSP  K  +  +  SP  S    L+ 
Sbjct: 63  PSPRISPPAASPKYEATVIPEASPPL-KPARSPPVSPPRKSAEPRNSISP-NSYQEPLKP 122

Query: 107 SPPPPPPLALPPTHFTAVNGTTTQRGIQPEVEKKSIVYNKTVEKPVDRPSEYGSGKPHEK 166
           + P    L LP +     + TT    I+PEVE+K+    K+     D   EY SG P   
Sbjct: 123 TTPLLSTLVLPKSS----DVTTIPSAIKPEVEQKTGPLKKS-----DPQVEYVSGMPPPS 182

Query: 167 QKAAESINLAGHNVGAVMEI----DKSSVGHRLGGETVRKNETEGGDVGRDGNEEKKKEE 226
            +A ++INLAG N+GAVM+I    DKSS     GGE  RK ETE G             +
Sbjct: 183 LQA-KAINLAGDNIGAVMKINQFSDKSS-----GGEVTRKIETETG------------VQ 242

Query: 227 KKKKEKKEKKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAAD 276
           ++  E+K ++E + PMT   NSNFQ VNNSV+Y+SSC+ RDPGLHL F+   D
Sbjct: 243 QENDEEKSRRETEFPMTPITNSNFQEVNNSVVYNSSCNSRDPGLHLDFSGKKD 266

[Close]
BLAST of Cp4.1LG08g00640 vs. NCBI nr
Match: gi|568876539|ref|XP_006491335.1| (PREDICTED: vegetative cell wall protein gp1 [Citrus sinensis])

HSP 1 Score: 89.7 bits (221), Expect = 8.8e-15
Identity = 105/322 (32.61%), Postives = 145/322 (45.03%), Query Frame = 1 

Query: 2   SNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAEK----PTSPIAS 61
           + FP    S  +P+    PV+ T+ P    KP    F   +   +PA      PTSP A 
Sbjct: 164 TTFPGIRRSPPKPAPTVFPVITTSPP----KPAPTTFRVPTSPPKPAPSTFSVPTSP-AK 223

Query: 62  PKYGPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALP 121
           PK   +     +  PP+     PV P       LS  +P QSP +  + + PPP PL LP
Sbjct: 224 PKPAVTAAISTTTSPPRVPSPAPVGPRTL----LSDGTPPQSPYK--KATAPPPSPLTLP 283

Query: 122 PTHFTAVNGTTTQRGIQPEVEKKSIVYNKTVEKP-------------VDRPSEYG----- 181
           P  FT  +   TQ  I  E E+K+++     EKP               +PS Y      
Sbjct: 284 PPQFT--SKAETQPTIPAETEQKTVLVQTRSEKPKSWFNGTGNHFDETHKPSSYAHRGNH 343

Query: 182 --------SGKPHEKQKAAES-------INLAGHNVGAVMEIDKSSVGHRLGG--ETVRK 241
                   +GK H KQ +++S       I +AG N GA ME+ +S + H   G   T+  
Sbjct: 344 EVHKEVAKNGKVHRKQFSSDSDEVGMRVITIAGENKGAFMEVIRSPLKHTFDGTPHTLHN 403

Query: 242 N---ETEGGDVGRDGNEEKKKEEKKKKEKKEKKEKKV---PMTAFMNSNFQSVNNSVLYD 279
               +T+    G         EEK KK+K  K +  +   PM AFMNSN Q VNNS+++ 
Sbjct: 404 KGSLKTQSDGTGWHSFSSSSDEEKSKKDKNYKAKAAMLPPPMGAFMNSNVQGVNNSIVFH 463

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g00640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g00640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L320_CUCSA6.3e-5250.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1[more]
A0A0A0L8G8_CUCSA1.5e-2138.11Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1[more]
A0A067HFA4_CITSI6.1e-1532.61Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011479mg PE=4 SV=1[more]
V4U762_9ROSI6.1e-1532.61Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019915mg PE=4 SV=1[more]
A0A0A0L5T3_CUCSA2.3e-1431.44Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1[more]
BLAST of Cp4.1LG08g00640 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46630.19.1e-1029.22 unknown protein[more]
BLAST of Cp4.1LG08g00640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074890|ref|XP_008437851.1|1.1e-6254.07PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo][more]
gi|449432018|ref|XP_004133797.1|9.0e-5250.00PREDICTED: atherin-like [Cucumis sativus][more]
gi|778676797|ref|XP_011650663.1|2.2e-2138.11PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus][more]
gi|659074895|ref|XP_008437853.1|5.0e-1841.20PREDICTED: proline-rich extensin-like protein EPR1 [Cucumis melo][more]
gi|568876539|ref|XP_006491335.1|8.8e-1532.61PREDICTED: vegetative cell wall protein gp1 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g00640.1Cp4.1LG08g00640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 212..235
scor
NoneNo IPR availablePANTHERPTHR33472FAMILY NOT NAMEDcoord: 5..282
score: 4.2