Bhi01G000384 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G000384
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	WW domain-binding protein 11-like
Location	chr1 : 9345496 .. 9345928 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCAATCCGGAATCAAGCCGGAGGTGGAGCAGAAAACCGGCCCGTACAAGAAGCCGGATCGGCAGACAGAATACGGATCCGGTAAGCCGCCGGTGAACCTACAGGCGGAGGCTATAAACCTCACCGGACATAACGTAGGCGTGGTAATGGAAAATAACGAATTATCCAATAAAACGATCAGGCGGAGAAGTCATTAGGAAGATCGAAACAGAAACCGGCGTCCGGCAAGAAAATGACGAGGAGAAAAGTCGCGGAGCAACCGGATTTCCGATGACGCCAATCCTGAACAGCAATTTCCAAGAAGTGAACAATTCAGTTCTGTGTAATTCGTCTTGCGGTGGGCGTGATCCGGGGCTGCATCTTGATTTCTCCGGCAAGTCAAAGGATGATGCAGCCACTGTGGACGGCGGCGAGAAATCTAAATATTAA

mRNA sequence

ATGATTCAATCCGGAATCAAGCCGGAGGTGGAGCAGAAAACCGGCCCGTACAAGAAGCCGGATCGGCAGACAGAATACGGATCCGGTAAGCCGCCGGTGAACCTACAGGCGGAGGCTATAAACCTCACCGGACATAACGTAGGCGTGGTAATGGAAAATAACGAATTATCCAATAAAACGATCAGGCGGAGAAAAACCGGCGTCCGGCAAGAAAATGACGAGGAGAAAAGTCGCGGAGCAACCGGATTTCCGATGACGCCAATCCTGAACAGCAATTTCCAAGAAGTGAACAATTCAGTTCTGTGTAATTCGTCTTGCGGTGGGCGTGATCCGGGGCTGCATCTTGATTTCTCCGGCAAGTCAAAGGATGATGCAGCCACTGTGGACGGCGGCGAGAAATCTAAATATTAA

Coding sequence (CDS)

ATGATTCAATCCGGAATCAAGCCGGAGGTGGAGCAGAAAACCGGCCCGTACAAGAAGCCGGATCGGCAGACAGAATACGGATCCGGTAAGCCGCCGGTGAACCTACAGGCGGAGGCTATAAACCTCACCGGACATAACGTAGGCGTGGTAATGGAAAATAACGAATTATCCAATAAAACGATCAGGCGGAGAAAAACCGGCGTCCGGCAAGAAAATGACGAGGAGAAAAGTCGCGGAGCAACCGGATTTCCGATGACGCCAATCCTGAACAGCAATTTCCAAGAAGTGAACAATTCAGTTCTGTGTAATTCGTCTTGCGGTGGGCGTGATCCGGGGCTGCATCTTGATTTCTCCGGCAAGTCAAAGGATGATGCAGCCACTGTGGACGGCGGCGAGAAATCTAAATATTAA

Protein sequence

MIQSGIKPEVEQKTGPYKKPDRQTEYGSGKPPVNLQAEAINLTGHNVGVVMENNELSNKTIRRRKTGVRQENDEEKSRGATGFPMTPILNSNFQEVNNSVLCNSSCGGRDPGLHLDFSGKSKDDAATVDGGEKSKY

Homology

[Close]

BLAST of Bhi01G000384 vs. TAIR10
Match: AT2G46630.1 (unknown protein)

HSP 1 Score: 45.8 bits (107), Expect = 2.4e-05
Identity = 20/48 (41.67%), Postives = 29/48 (60.42%), Query Frame = 0


Query: 77  SRGATGFPMTPILNSNFQEVNNSVLCNSSCGGRDPGLHLDFSGKSKDD 125
           ++G +  PM   +NSN Q +NNS++ NS+    DPG+HL  S K   D
Sbjct: 331 NKGNSNLPMKAFMNSNVQMINNSIVYNSTASHHDPGVHLKISRKPGSD 378

[Close]

BLAST of Bhi01G000384 vs. TAIR10
Match: AT1G63310.1 (unknown protein)

HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04
Identity = 30/80 (37.50%), Postives = 43/80 (53.75%), Query Frame = 0


Query: 40  INLTGHNVGVVMENNELSNKTIRRRKTGVRQENDEEKSRGATGFPMTPILNSNFQEVNNS 99
           I L+G N+G  M+  EL N        G R +N + +      F ++  +NSNFQ VNNS
Sbjct: 53  ITLSGSNLGATMK-TELDN------NHGDRDQNGDHE----LDF-LSTYVNSNFQAVNNS 112

Query: 100 VLCNSSCGGRDPGLHLDFSG 120
           ++  +     DPG+HLD SG
Sbjct: 113 IMIGAKYETHDPGVHLDISG 120

[Close]

BLAST of Bhi01G000384 vs. TrEMBL
Match: tr|A0A0A0L8G8|A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 94/142 (66.20%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 2   IQSGIKPEVEQKTGPYKKPDRQTEYGSGKPPVNLQAEAINLTGHNVGVVMENNELSNK-- 61
           + S IKPEVEQKT  +KK DRQ +  S KPP +LQA+AINLTG N+G VM+ N+ S+K  
Sbjct: 141 VPSAIKPEVEQKTDSFKKSDRQVDNVSAKPPPSLQAKAINLTGDNIGAVMKINQFSDKIS 200

Query: 62  --TIRRR---KTGVRQENDEEKSRGATGFPMTPILNSNFQEVNNSVLCNSSCGGRDPGLH 121
              + R+   KTGV+QEND EKSR  T FPMTPI NSNFQEVNNSV+ NSSC GRDPGLH
Sbjct: 201 GGEVTRKIETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLH 260

Query: 122 LDFSGKSKDDAATVDGGEKSKY 137
           LDFSG+ KD+AATVDG +KSKY
Sbjct: 261 LDFSGQ-KDEAATVDGNKKSKY 281

[Close]

BLAST of Bhi01G000384 vs. TrEMBL
Match: tr|A0A1S3AVL7|A0A1S3AVL7_CUCME (WW domain-binding protein 11-like OS=Cucumis melo OX=3656 GN=LOC103483160 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.7e-38
Identity = 91/135 (67.41%), Postives = 105/135 (77.78%), Query Frame = 0


Query: 2   IQSGIKPEVEQKTGPYKKPDRQTEYGSGKPPVNLQAEAINLTGHNVGVVMENNELSNKT- 61
           I S IKPEVEQKTGP KK D Q EY SG PP +LQA+AINL G N+G VM+ N+ S+K+ 
Sbjct: 139 IPSAIKPEVEQKTGPLKKSDPQVEYVSGMPPPSLQAKAINLAGDNIGAVMKINQFSDKSS 198

Query: 62  ---IRRR---KTGVRQENDEEKSRGATGFPMTPILNSNFQEVNNSVLCNSSCGGRDPGLH 121
              + R+   +TGV+QENDEEKSR  T FPMTPI NSNFQEVNNSV+ NSSC  RDPGLH
Sbjct: 199 GGEVTRKIETETGVQQENDEEKSRRETEFPMTPITNSNFQEVNNSVVYNSSCNSRDPGLH 258

Query: 122 LDFSGKSKDDAATVD 130
           LDFSGK KD+AATV+
Sbjct: 259 LDFSGK-KDEAATVE 272

[Close]

BLAST of Bhi01G000384 vs. TrEMBL
Match: tr|A0A0A0L320|A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.5e-12
Identity = 60/154 (38.96%), Postives = 82/154 (53.25%), Query Frame = 0


Query: 3   QSGIKPEVEQKTGPY--------KKPDRQTEYGSGKPPVNLQAE--AINLTGHNVGVVME 62
           Q  ++PEVE K   Y         K +RQ+E+GSGK     Q +   + L GHNVG VME
Sbjct: 137 QPRVQPEVETKGIVYNKAADEKPSKSNRQSEHGSGKSVHQKQQKPGVMKLKGHNVGAVME 196

Query: 63  NNE------LSNKTIRRRKT----GVRQENDEEKSRGATGF-PMTPILNSNFQEVNNSVL 122
            N+      L  +T+++++T     V     E+K  G     P++  +NSNFQ VNNS+L
Sbjct: 197 VNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNSLL 256

Query: 123 CNSSCGGRDPGLHLDFSGKSKDDAATVDGGEKSK 136
            +SSC  RDPGLHL F   +    A VDG +  K
Sbjct: 257 FDSSCQHRDPGLHLSFPNAADGGGAVVDGDKSYK 290

[Close]

BLAST of Bhi01G000384 vs. TrEMBL
Match: tr|A0A1S3AV38|A0A1S3AV38_CUCME (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.2e-12
Identity = 62/157 (39.49%), Postives = 79/157 (50.32%), Query Frame = 0


Query: 3   QSGIKPEVEQKTGPY----KKPDRQT----EYGSGKPPVNLQ-AEAINLTGHNVGVVMEN 62
           Q  ++PEVE K   Y    +KP +      EYGS K     Q  E I L GHNVG VME 
Sbjct: 145 QPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSKSHQKKQKPEVIKLKGHNVGAVMEI 204

Query: 63  NE------LSNKTIRRRKT---------GVRQENDEEKSRGATGFPMTPILNSNFQEVNN 122
           N+      L  +T+++ +T         G   +  E K +     P+T  +NSNFQ VNN
Sbjct: 205 NKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTETKKKEP---PITAFMNSNFQSVNN 264

Query: 123 SVLCNSSCGGRDPGLHLDFSGKSKDDAATVDGGEKSK 136
           S+L +SSC  RDPGLHL F      D A VDG +  K
Sbjct: 265 SLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYK 298

[Close]

BLAST of Bhi01G000384 vs. TrEMBL
Match: tr|A0A0A0L3R5|A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07
Identity = 52/153 (33.99%), Postives = 69/153 (45.10%), Query Frame = 0


Query: 8   PEVEQKTGPY-----KKPDRQTEYGSGKPPVN-----LQAEAINLTGHNVGVVMENNELS 67
           PE +QK G +     +K  +   Y      ++     LQ  AIN+ G NVG VME  E S
Sbjct: 115 PEAKQKPGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESS 174

Query: 68  N-------KTIRRRKTGVRQEND-------EEKSRGATGFPMTPILNSNFQEVNNSVLCN 127
                   K I+    G+   ND       E      +  P    LNSNFQ VNNS+L N
Sbjct: 175 KREGGHMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYN 234

Query: 128 SSCGGRDPGLHLDFSGKSKDDAATVDGGEKSKY 137
           ++   RDPGLHL FS     + + VD  +K  +
Sbjct: 235 ANLTHRDPGLHLAFSRNPTGERSGVDDHKKQHH 267

[Close]

BLAST of Bhi01G000384 vs. NCBI nr
Match: XP_011650663.1 (PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus] >KGN56396.1 hypothetical protein Csa_3G119310 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39
Identity = 94/142 (66.20%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 2   IQSGIKPEVEQKTGPYKKPDRQTEYGSGKPPVNLQAEAINLTGHNVGVVMENNELSNK-- 61
           + S IKPEVEQKT  +KK DRQ +  S KPP +LQA+AINLTG N+G VM+ N+ S+K  
Sbjct: 141 VPSAIKPEVEQKTDSFKKSDRQVDNVSAKPPPSLQAKAINLTGDNIGAVMKINQFSDKIS 200

Query: 62  --TIRRR---KTGVRQENDEEKSRGATGFPMTPILNSNFQEVNNSVLCNSSCGGRDPGLH 121
              + R+   KTGV+QEND EKSR  T FPMTPI NSNFQEVNNSV+ NSSC GRDPGLH
Sbjct: 201 GGEVTRKIETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLH 260

Query: 122 LDFSGKSKDDAATVDGGEKSKY 137
           LDFSG+ KD+AATVDG +KSKY
Sbjct: 261 LDFSGQ-KDEAATVDGNKKSKY 281

[Close]

BLAST of Bhi01G000384 vs. NCBI nr
Match: XP_008437853.1 (PREDICTED: WW domain-binding protein 11-like [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 91/135 (67.41%), Postives = 105/135 (77.78%), Query Frame = 0


Query: 2   IQSGIKPEVEQKTGPYKKPDRQTEYGSGKPPVNLQAEAINLTGHNVGVVMENNELSNKT- 61
           I S IKPEVEQKTGP KK D Q EY SG PP +LQA+AINL G N+G VM+ N+ S+K+ 
Sbjct: 139 IPSAIKPEVEQKTGPLKKSDPQVEYVSGMPPPSLQAKAINLAGDNIGAVMKINQFSDKSS 198

Query: 62  ---IRRR---KTGVRQENDEEKSRGATGFPMTPILNSNFQEVNNSVLCNSSCGGRDPGLH 121
              + R+   +TGV+QENDEEKSR  T FPMTPI NSNFQEVNNSV+ NSSC  RDPGLH
Sbjct: 199 GGEVTRKIETETGVQQENDEEKSRRETEFPMTPITNSNFQEVNNSVVYNSSCNSRDPGLH 258

Query: 122 LDFSGKSKDDAATVD 130
           LDFSGK KD+AATV+
Sbjct: 259 LDFSGK-KDEAATVE 272

[Close]

BLAST of Bhi01G000384 vs. NCBI nr
Match: XP_022147499.1 (uncharacterized protein LOC111016407 [Momordica charantia])

HSP 1 Score: 118.6 bits (296), Expect = 1.6e-23
Identity = 70/140 (50.00%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 18  KKPDRQTEYGSG-------KPPVNLQAEAINLTGHNVGVVMENNELSNKTIR-------- 77
           K+P R+    +G       KPP   QAEAINLTGHNVG VME  + S    R        
Sbjct: 21  KRPSRRRRSRTGRRSTDPEKPPQKQQAEAINLTGHNVGAVMEVRQFSESDDRSGGEIAKK 80

Query: 78  -RRKTGVRQENDEEKSRG-------ATGFPMTPILNSNFQEVNNSVLCNSSCGGRDPGLH 135
              + GVR  ND+E+ +G         GFP T  +NSNFQEVNNSV+ +S+C GRDPGLH
Sbjct: 81  NETEGGVRHGNDDERKKGRKDKSDRVKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLH 140

[Close]

BLAST of Bhi01G000384 vs. NCBI nr
Match: XP_022950117.1 (wiskott-Aldrich syndrome protein family member 2-like [Cucurbita moschata])

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-19
Identity = 69/147 (46.94%), Postives = 82/147 (55.78%), Query Frame = 0


Query: 3   QSGIKPEVEQKTGPYKKP-------DRQTEYGSGKPPVNLQ-AEAINLTGHNVGVVME-- 62
           Q  I+PE+EQK+  Y K        DR +EYGSGKP    + AEAINL GHNVG VME  
Sbjct: 129 QPKIQPEIEQKSIVYNKTVEKPAKFDRASEYGSGKPHEKQKAAEAINLAGHNVGAVMEID 188

Query: 63  ----NNELSNKTIRRRKTGVRQENDEEKSRGATGFPMTPILNSNFQEVNNSVLCNSSCGG 122
                + L  +T+R     VR  N+E+        PMT   NSNFQ VNNSVL  SSC  
Sbjct: 189 KSSVGHRLGGETVR---GSVRDGNEEKXXXXXKELPMTAFTNSNFQSVNNSVLYGSSCNH 248

Query: 123 RDPGLHLDFSGKSKDDAATVDGGEKSK 136
           RDPGLHL F+  +  D A  DG +  K
Sbjct: 249 RDPGLHLKFADAADGDGAAADGRKNYK 272

[Close]

BLAST of Bhi01G000384 vs. NCBI nr
Match: XP_022147458.1 (vegetative cell wall protein gp1-like [Momordica charantia])

HSP 1 Score: 98.2 bits (243), Expect = 2.3e-17
Identity = 60/128 (46.88%), Postives = 73/128 (57.03%), Query Frame = 0


Query: 19  KPDRQTEYGSGKPPVNLQAEAINLTGHNVGVVMENNELSNK-----TIRRRKT-----GV 78
           K  R +E+GSGKPP   QAE INLTGHNVG VME N+ S K      I+++++     G 
Sbjct: 156 KSGRPSEHGSGKPP---QAEVINLTGHNVGAVMEINQSSAKHSAGEIIKKKESETELGGA 215

Query: 79  RQENDEEKSRGATGFPMTPILNSNFQEVNNSVLCNSSCGGRDPGLHLDFSGKSKDDAATV 137
              NDE K+      P T  +NSNFQ VNNSVL +SSC  RDPGLHL FS  +      +
Sbjct: 216 HHGNDERKTGAKKELPGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAI 275

The following BLAST results are available for this feature:

BLAST of Bhi01G000384 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46630.1	2.4e-05	41.67	unknown protein	[more]
AT1G63310.1	1.6e-04	37.50	unknown protein	[more]

BLAST of Bhi01G000384 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G000384 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L8G8\|A0A0A0L8G8_CUCSA	1.1e-39	66.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1	[more]
tr\|A0A1S3AVL7\|A0A1S3AVL7_CUCME	7.7e-38	67.41	WW domain-binding protein 11-like OS=Cucumis melo OX=3656 GN=LOC103483160 PE=4 S...	[more]
tr\|A0A0A0L320\|A0A0A0L320_CUCSA	2.5e-12	38.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1	[more]
tr\|A0A1S3AV38\|A0A1S3AV38_CUCME	7.2e-12	39.49	zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1	[more]
tr\|A0A0A0L3R5\|A0A0A0L3R5_CUCSA	1.4e-07	33.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1	[more]

BLAST of Bhi01G000384 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650663.1	1.6e-39	66.20	PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus] >KGN56396.1 h...	[more]
XP_008437853.1	1.2e-37	67.41	PREDICTED: WW domain-binding protein 11-like [Cucumis melo]	[more]
XP_022147499.1	1.6e-23	50.00	uncharacterized protein LOC111016407 [Momordica charantia]	[more]
XP_022950117.1	1.1e-19	46.94	wiskott-Aldrich syndrome protein family member 2-like [Cucurbita moschata]	[more]
XP_022147458.1	2.3e-17	46.88	vegetative cell wall protein gp1-like [Momordica charantia]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000384	Bhi01M000384	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..136
None	No IPR available	PANTHER	PTHR33472	FAMILY NOT NAMED	coord: 37..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi01G000384	Csa3G119280	Cucumber (Chinese Long) v2	cuwgoB284
Bhi01G000384	MELO3C005995	Melon (DHL92) v3.5.1	mewgoB540
Bhi01G000384	ClCG05G000580	Watermelon (Charleston Gray)	wcgwgoB439
Bhi01G000384	CSPI03G07650	Wild cucumber (PI 183967)	cpiwgoB284
Bhi01G000384	Cucsa.259490	Cucumber (Gy14) v1	cgywgoB514
Bhi01G000384	CmaCh06G009850	Cucurbita maxima (Rimu)	cmawgoB1021
Bhi01G000384	CmaCh14G021290	Cucurbita maxima (Rimu)	cmawgoB0315
Bhi01G000384	CmoCh06G010180	Cucurbita moschata (Rifu)	cmowgoB1013
Bhi01G000384	CmoCh14G021920	Cucurbita moschata (Rifu)	cmowgoB0303
Bhi01G000384	Lsi05G021560	Bottle gourd (USVL1VR-Ls)	lsiwgoB433
Bhi01G000384	Cp4.1LG08g00640	Cucurbita pepo (Zucchini)	cpewgoB1105
Bhi01G000384	MELO3C005995.2	Melon (DHL92) v3.6.1	medwgoB542
Bhi01G000384	Carg25713	Silver-seed gourd	carwgoB0153
Bhi01G000384	Carg20912	Silver-seed gourd	carwgoB1162
Bhi01G000384	CsaV3_3G007790	Cucumber (Chinese Long) v3	cucwgoB288
Bhi01G000384	Cla021125	Watermelon (97103) v1	wgowmB212
Bhi01G000384	Cla97C05G080630	Watermelon (97103) v2	wgowmbB191

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G000384	Wax gourd	wgowgoB026
Bhi01G000384	Cucumber (Gy14) v2	cgybwgoB272
Bhi01G000384	Cucurbita maxima (Rimu)	cmawgoB1011
Bhi01G000384	Cucurbita pepo (Zucchini)	cpewgoB0770