Carg20912 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20912
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	vegetative cell wall protein gp1-like
Location	Cucurbita_argyrosperma_scaffold_141 : 311831 .. 312901 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTCATATTTTATTTGGATTTTCATTTTCTTAGCTACCAAAACAATATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCGGCAGAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAAGAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGATCGCTGCGAACATCGCCGCCGCCACCGCCACCTCTCGCTCTGCCGCCTACCCATTTCACCGCCGCCGTTAATAGGACCACCACTCAACCCCGGTATTAAATTACCTAAAAAAAAAAAACTTAATAATTAAGCTTAATTAATTTTAATTTCAAACTATTTACGTTTCAAATTAGAGAAATAAATTGATACAAGATATTTGATTTATTTAAAAAAAAAATATTTATTTATATGATCCATAACAGAATTCAACCCGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAGGCCGGTGAAGTCTGACCGGTTGTCGGAGTATGGCTCGGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGTCTATAAACCTCGCCGGACATAATGTCGGCGCAGTCATGGAAATAGATAAGTCGTCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGACCTGGGCCGGGATGGAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAGGAAAAGAAGGAAACGAAAGAGAAGAAAGTGCCGATGACTGCATTTATGAACAGCAATTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGCCGTAAGAATTACAAGTCGTAG

mRNA sequence

TATTTCATATTTTATTTGGATTTTCATTTTCTTAGCTACCAAAACAATATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCGGCAGAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAAGAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGATCGCTGCGAACATCGCCGCCGCCACCGCCACCTCTCGCTCTGCCGCCTACCCATTTCACCGCCGCCGTTAATAGGACCACCACTCAACCCCGAATTCAACCCGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAGGCCGGTGAAGTCTGACCGGTTGTCGGAGTATGGCTCGGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGTCTATAAACCTCGCCGGACATAATGTCGGCGCAGTCATGGAAATAGATAAGTCGTCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGACCTGGGCCGGGATGGAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAGGAAAAGAAGGAAACGAAAGAGAAGAAAGTGCCGATGACTGCATTTATGAACAGCAATTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGCCGTAAGAATTACAAGTCGTAG

Coding sequence (CDS)

ATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCGGCAGAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAAGAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGATCGCTGCGAACATCGCCGCCGCCACCGCCACCTCTCGCTCTGCCGCCTACCCATTTCACCGCCGCCGTTAATAGGACCACCACTCAACCCCGAATTCAACCCGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAGGCCGGTGAAGTCTGACCGGTTGTCGGAGTATGGCTCGGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGTCTATAAACCTCGCCGGACATAATGTCGGCGCAGTCATGGAAATAGATAAGTCGTCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGACCTGGGCCGGGATGGAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAGGAAAAGAAGGAAACGAAAGAGAAGAAAGTGCCGATGACTGCATTTATGAACAGCAATTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGCCGTAAGAATTACAAGTCGTAG

Protein sequence

MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTHFTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKKKEKKEKKETKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS

Homology

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: XP_023538978.1 (leucine-rich repeat extensin-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 437.6 bits (1124), Expect = 3.4e-119
Identity = 274/292 (93.84%), Postives = 279/292 (95.55%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAA+LKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXXXXH 120
           GPSVTRVPSPPPPKDELSPPVSPA KYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXX  H
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXXPTH 120

Query: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180
           FT AVN TTTQ  IQPEVEKKSIVYNKTVE+PV  DR SEYGSGKPHEKQKAAESINLAG
Sbjct: 121 FT-AVNGTTTQRGIQPEVEKKSIVYNKTVEKPV--DRPSEYGSGKPHEKQKAAESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDL--XXXXXXXXXXXXXXXXXXXXXXXXP 240
           HNVGAVMEIDKSSVGHRLGGETVRKNETEGGD+   XXXXXXXXXXXXXXXXXXXXXXXP
Sbjct: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDVGRDXXXXXXXXXXXXXXXXXXXXXXXP 240

Query: 241 MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRK+YK+
Sbjct: 241 MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA 289

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: XP_023538977.1 (leucine-rich repeat extensin-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 437.2 bits (1123), Expect = 4.4e-119
Identity = 274/291 (94.16%), Postives = 278/291 (95.53%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAA+LKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXXXXH 120
           GPSVTRVPSPPPPKDELSPPVSPA KYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXX  H
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXXPTH 120

Query: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180
           FT AVN TTTQ  IQPEVEKKSIVYNKTVE+PV  DR SEYGSGKPHEKQKAAESINLAG
Sbjct: 121 FT-AVNGTTTQRGIQPEVEKKSIVYNKTVEKPV--DRPSEYGSGKPHEKQKAAESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDL--XXXXXXXXXXXXXXXXXXXXXXXXP 240
           HNVGAVMEIDKSSVGHRLGGETVRKNETEGGD+   XXXXXXXXXXXXXXXXXXXXXXXP
Sbjct: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDVGRDXXXXXXXXXXXXXXXXXXXXXXXP 240

Query: 241 MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYK 290
           MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRK+YK
Sbjct: 241 MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYK 288

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: XP_022951357.1 (sulfated surface glycoprotein 185-like [Cucurbita moschata])

HSP 1 Score: 435.3 bits (1118), Expect = 1.7e-118
Identity = 272/290 (93.79%), Postives = 276/290 (95.17%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXXXXH 120
           GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXXX  
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXXXPT 120

Query: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180
              AVN TTTQPRIQPEVEKKSIVYNKTVE+ VKSDR SEYGSGKP+EKQKA ESINLAG
Sbjct: 121 QFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQKAVESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLXXXXXXXXXXXXXXXXXXXXXXXXPMT 240
           HNVGAVMEIDKSSVGHRLGGETVRKNETE    XXXXXXXXXXXXXXXXXXXXXXX PMT
Sbjct: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETE---XXXXXXXXXXXXXXXXXXXXXXXXVPMT 240

Query: 241 AFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           AFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRK+YK+
Sbjct: 241 AFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA 287

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: XP_022974816.1 (wiskott-Aldrich syndrome protein family member 2-like [Cucurbita maxima] >XP_022975275.1 wiskott-Aldrich syndrome protein family member 2-like [Cucurbita maxima])

HSP 1 Score: 343.2 bits (879), Expect = 8.6e-91
Identity = 232/290 (80.00%), Postives = 240/290 (82.76%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFG  RQRPS+AAPPVLPTTLPAAE KPET PFY+ SQ+LQPAEKPTSPIAS   
Sbjct: 1   MSNFPRFGRPRQRPSVAAPPVLPTTLPAAEHKPETLPFYRTSQTLQPAEKPTSPIASXXX 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXXXXH 120
                                   KKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXX   H
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXKKYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXPPTH 120

Query: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180
           FTA  +  TTQPRIQ EVEKKSIVYNKTVE+PVKSDR  EYGSGK HEKQK AESINLAG
Sbjct: 121 FTAK-DGNTTQPRIQTEVEKKSIVYNKTVEKPVKSDRPLEYGSGKSHEKQKTAESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLXXXXXXXXXXXXXXXXXXXXXXXXPMT 240
           HNVGAVMEIDK S  HRLGGETVRKN+TEG   XXXXXXXXXXXXXXXXXXXXXXXXPMT
Sbjct: 181 HNVGAVMEIDKLSASHRLGGETVRKNKTEG---XXXXXXXXXXXXXXXXXXXXXXXXPMT 240

Query: 241 AFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           AFMNSNFQSVNNSVLYDSSC+HRDPGLHLKFADAADGDGAAVDGRKNYK+
Sbjct: 241 AFMNSNFQSVNNSVLYDSSCNHRDPGLHLKFADAADGDGAAVDGRKNYKA 286

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: XP_022950117.1 (wiskott-Aldrich syndrome protein family member 2-like [Cucurbita moschata])

HSP 1 Score: 316.6 bits (810), Expect = 8.7e-83
Identity = 203/278 (73.02%), Postives = 217/278 (78.06%), Query Frame = 0


Query: 21  VLPTTLPAAEL--KPETQPFYKRSQS----LQPAEKPTSPIASPKYGPSVTRVPSPPPPK 80
           V P  LP  EL  KP  +P      S      PA+KP SPIASPKYG SVTRVPSPPPPK
Sbjct: 11  VPPLKLPTIELKKKPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPK 70

Query: 81  DE-LSPPVSPAKKYPDR-LSQTSPLQSPSRSLRTXXXXXXXXXXXXXHFTAAVNRTTTQP 140
           DE LSPPVSPAKKYPDR ++QTSPLQSPSRSLRTXXXXXXXXXXXX     AVN TTTQP
Sbjct: 71  DELLSPPVSPAKKYPDRWIAQTSPLQSPSRSLRTXXXXXXXXXXXXPTQFTAVNGTTTQP 130

Query: 141 RIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAGHNVGAVMEIDKS 200
           +IQPE+E+KSIVYNKTVE+P K DR SEYGSGKPHEKQKAAE+INLAGHNVGAVMEIDKS
Sbjct: 131 KIQPEIEQKSIVYNKTVEKPAKFDRASEYGSGKPHEKQKAAEAINLAGHNVGAVMEIDKS 190

Query: 201 SVGHRLGGETVRKNETEGGDLXXXXXXXXXXXXXXXXXXXXXXXXPMTAFMNSNFQSVNN 260
           SVGHRLGGETVR +  +G +                 XXXXX   PMTAF NSNFQSVNN
Sbjct: 191 SVGHRLGGETVRGSVRDGNE---------------EKXXXXXKELPMTAFTNSNFQSVNN 250

Query: 261 SVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           SVLY SSC+HRDPGLHLKFADAADGDGAA DGRKNYK+
Sbjct: 251 SVLYGSSCNHRDPGLHLKFADAADGDGAAADGRKNYKA 273

[Close]

BLAST of Carg20912 vs. TAIR10
Match: AT2G46630.1 (unknown protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 52/127 (40.94%), Postives = 65/127 (51.18%), Query Frame = 0


Query: 163 SGKPHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGG----------- 222
           S    E   +   I +AG N GAVMEI +S  G++ GG     +    G           
Sbjct: 252 SSSDSENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSGTHSSRVSHGTGEKGRRLQXX 311

Query: 223 DLXXXXXXXXXXXXXXXXXXXXXXXXPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKF 279
             XXXXXXXXXXXX            PM AFMNSN Q +NNS++Y+S+ SH DPG+HLK 
Sbjct: 312 XXXXXXXXXXXXXXTKNVPNKGNSNLPMKAFMNSNVQMINNSIVYNSTASHHDPGVHLKI 371

[Close]

BLAST of Carg20912 vs. TrEMBL
Match: tr|A0A1S3AV38|A0A1S3AV38_CUCME (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.4e-58
Identity = 158/307 (51.47%), Postives = 189/307 (61.56%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPF----------YKRSQSLQPAEK 60
           M+N PRFG +RQR     PPV     PA E + +  PF            R +S +P   
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  P----TSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLR 120
           P    TSP ASPKYG S TR+   P  K  +SPP S   KY +R + +T+P  SP++S R
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 TXXXXXXXXXXXXXH-FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLS-EYGS 180
              XXXX         FT   N TT QPR+QPEVE K IVYNKTVE+P KS+R S EYGS
Sbjct: 121 AKTXXXXPLALPRNQVFTG--NGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGS 180

Query: 181 GKPHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEG-GDLXXXXXXXXX 240
            K H+K++  E I L GHNVGAVMEI+KSS G+RLGGET++KNETE  GD+         
Sbjct: 181 SKSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDV-------HG 240

Query: 241 XXXXXXXXXXXXXXXPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAV 290
                          P+TAFMNSNFQSVNNS+L+DSSC+HRDPGLHL F DA DGDGA V
Sbjct: 241 YGHEDKKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIV 298

[Close]

BLAST of Carg20912 vs. TrEMBL
Match: tr|A0A0A0L320|A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48
Identity = 139/299 (46.49%), Postives = 173/299 (57.86%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPA---EKPTSPIAS 60
           M+N PR G +RQR S   PPV     PA E K ET P+     +  PA    +   P++S
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEPKYETMPYATSITTPAPASPRRESPRPLSS 60

Query: 61  PK---YGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLRTXXXXXXX 120
           P      P  +RV S P  K   SPP S   KY +R + +T+P  +P++S R        
Sbjct: 61  PSKKATSPFASRVDSSPAAKATRSPPDSIGDKYLERRNGETTPPLTPAKS-RPAKTSPLS 120

Query: 121 XXXXXXHFTAAVNRTTTQPRIQPEVEKKSIVYNKTV-ERPVKSDRLSEYGSGKP-HEKQK 180
                       N TT QPR+QPEVE K IVYNK   E+P KS+R SE+GSGK  H+KQ+
Sbjct: 121 PLALPRSQVITGNGTTAQPRVQPEVETKGIVYNKAADEKPSKSNRQSEHGSGKSVHQKQQ 180

Query: 181 AAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETE-GGDLXXXXXXXXXXXXXXXXX 240
               + L GHNVGAVME++KSS G+RLGGET++K ETE  GD+                 
Sbjct: 181 KPGVMKLKGHNVGAVMEVNKSSAGYRLGGETLKKKETEDDGDV--------DGYGHEDKK 240

Query: 241 XXXXXXXPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYK 290
                  P++AFMNSNFQSVNNS+L+DSSC HRDPGLHL F +AADG GA VDG K+YK
Sbjct: 241 TGRKKKPPISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLSFPNAADGGGAVVDGDKSYK 290

[Close]

BLAST of Carg20912 vs. TrEMBL
Match: tr|A0A0A0L8G8|A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.5e-19
Identity = 93/238 (39.08%), Postives = 115/238 (48.32%), Query Frame = 0


Query: 54  PIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSP--LQSPSRSLRTXXXXX 113
           P ASPKY  +V R  S PP K   SPPVSP +K  D     SP   Q P +  R      
Sbjct: 72  PAASPKYEATVIREAS-PPLKPARSPPVSPPRKSVDPRHSISPNSYQEPLKPTRPSLSTL 131

Query: 114 XXXXXXXXHFTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQK 173
                       + + TT    I+PEVE+K+  +        KSDR  +  S KP    +
Sbjct: 132 A--------LPKSADVTTVPSAIKPEVEQKTDSFK-------KSDRQVDNVSAKPPPSLQ 191

Query: 174 AAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLXXXXXXXXXXXXXXXXXX 233
            A++INL G N+GAVM+I++ S     GGE  RK ET+ G                    
Sbjct: 192 -AKAINLTGDNIGAVMKINQFS-DKISGGEVTRKIETKTG----------VQQENDMEKS 251

Query: 234 XXXXXXPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYK 290
                 PMT   NSNFQ VNNSV+Y+SSCS RDPGLHL F+   D + A VDG K  K
Sbjct: 252 RRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLHLDFSGQKD-EAATVDGNKKSK 280

[Close]

BLAST of Carg20912 vs. TrEMBL
Match: tr|A0A1S3AVL7|A0A1S3AVL7_CUCME (WW domain-binding protein 11-like OS=Cucumis melo OX=3656 GN=LOC103483160 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 7.4e-14
Identity = 68/154 (44.16%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 128 TTTQPRIQPEVEKKSIVYNKTVERPV-KSDRLSEYGSGKPHEKQKAAESINLAGHNVGAV 187
           TT    I+PEVE+K+         P+ KSD   EY SG P    + A++INLAG N+GAV
Sbjct: 137 TTIPSAIKPEVEQKT--------GPLKKSDPQVEYVSGMPPPSLQ-AKAINLAGDNIGAV 196

Query: 188 MEI----DKSSVGHRLGGETVRKNETEGGDLXXXXXXXXXXXXXXXXXXXXXXXXPMTAF 247
           M+I    DKSS     GGE  RK ETE G                          PMT  
Sbjct: 197 MKINQFSDKSS-----GGEVTRKIETETG----------VQQENDEEKSRRETEFPMTPI 256

Query: 248 MNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAAD 277
            NSNFQ VNNSV+Y+SSC+ RDPGLHL F+   D
Sbjct: 257 TNSNFQEVNNSVVYNSSCNSRDPGLHLDFSGKKD 266

[Close]

BLAST of Carg20912 vs. TrEMBL
Match: tr|A0A0A0L5T3|A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119290 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.2e-13
Identity = 109/337 (32.34%), Postives = 143/337 (42.43%), Query Frame = 0


Query: 1   MSNFPRFG------LSRQRPSMAA------------PPVLPTTLPAAELKPETQPFYKRS 60
           MSN PRFG       S  RP  A             P V P+ +P      +T P  +R+
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQPFTAATEPEVFPSAVPTTNTF-QTSPIKQRT 60

Query: 61  QSL-QPAEKPTSPIASPKYGPSVTRVPSPP--------------------PPK----DEL 120
             L  P +K +SP +SPKY  + T  P  P                     PK      +
Sbjct: 61  PRLSSPVKKFSSPPSSPKYSGAGTVSPRXPLXXXXVHNRYEGERRTSATTSPKTFKPTHI 120

Query: 121 SPPVSPAK----KYPDRLSQTSPLQSPSRSLRTXXXXXXXXXXXXXHFTAAVNRTTTQPR 180
           SPP SP+K      P  ++  SPL  P   +R                       + +PR
Sbjct: 121 SPPPSPSKPRHSTVPTAVAPLSPLALPRSQVRREP------------------EHSLRPR 180

Query: 181 IQPEVEKKSIVY-NKTVERPVKSDRL---SEYGSGKPHEKQK----AAESINLAGHNVGA 240
             PE+E+K I+Y   T E+P K+D      EYG+ KP +KQ+     ++ IN+ G NVGA
Sbjct: 181 SPPEIEQKKILYQTTTTEKPTKTDHYRQNDEYGASKPQQKQQHQQLQSDVINIKGENVGA 240

Query: 241 VMEIDKSSVGHRLGGETVRKNETEGGDLXXXXXXXXXXXXXXXXXXXXXXXXPMTAFMNS 283
           VM I +SS     G E ++K  T G                  XXXXXXXXX        
Sbjct: 241 VMHITQSSD----GSEVIKKKPTVG-----------QSKENEEXXXXXXXXXXXXXXXXX 300

The following BLAST results are available for this feature:

BLAST of Carg20912 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538978.1	3.4e-119	93.84	leucine-rich repeat extensin-like protein 2 isoform X2 [Cucurbita pepo subsp. pe...	[more]
XP_023538977.1	4.4e-119	94.16	leucine-rich repeat extensin-like protein 2 isoform X1 [Cucurbita pepo subsp. pe...	[more]
XP_022951357.1	1.7e-118	93.79	sulfated surface glycoprotein 185-like [Cucurbita moschata]	[more]
XP_022974816.1	8.6e-91	80.00	wiskott-Aldrich syndrome protein family member 2-like [Cucurbita maxima] >XP_022...	[more]
XP_022950117.1	8.7e-83	73.02	wiskott-Aldrich syndrome protein family member 2-like [Cucurbita moschata]	[more]

BLAST of Carg20912 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46630.1	1.6e-09	40.94	unknown protein	[more]

BLAST of Carg20912 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg20912 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AV38\|A0A1S3AV38_CUCME	6.4e-58	51.47	zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1	[more]
tr\|A0A0A0L320\|A0A0A0L320_CUCSA	1.2e-48	46.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1	[more]
tr\|A0A0A0L8G8\|A0A0A0L8G8_CUCSA	4.5e-19	39.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1	[more]
tr\|A0A1S3AVL7\|A0A1S3AVL7_CUCME	7.4e-14	44.16	WW domain-binding protein 11-like OS=Cucumis melo OX=3656 GN=LOC103483160 PE=4 S...	[more]
tr\|A0A0A0L5T3\|A0A0A0L5T3_CUCSA	6.2e-13	32.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119290 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20912-RA	Carg20912-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 215..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..237
None	No IPR available	PANTHER	PTHR33472	FAMILY NOT NAMED	coord: 12..280

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20912	Cla021125	Watermelon (97103) v1	carwmB0992
Carg20912	Csa3G119280	Cucumber (Chinese Long) v2	carcuB1007
Carg20912	MELO3C005995	Melon (DHL92) v3.5.1	carmeB0968
Carg20912	ClCG05G000580	Watermelon (Charleston Gray)	carwcgB0968
Carg20912	CSPI03G07650	Wild cucumber (PI 183967)	carcpiB1031
Carg20912	Cucsa.259500	Cucumber (Gy14) v1	carcgyB1110
Carg20912	CmaCh06G009830	Cucurbita maxima (Rimu)	carcmaB1376
Carg20912	CmaCh14G021290	Cucurbita maxima (Rimu)	carcmaB1373
Carg20912	CmoCh06G010180	Cucurbita moschata (Rifu)	carcmoB1332
Carg20912	CmoCh14G021910	Cucurbita moschata (Rifu)	carcmoB1330
Carg20912	Lsi05G021560	Bottle gourd (USVL1VR-Ls)	carlsiB907
Carg20912	Cp4.1LG03g15870	Cucurbita pepo (Zucchini)	carcpeB1379
Carg20912	Cp4.1LG08g00640	Cucurbita pepo (Zucchini)	carcpeB1380
Carg20912	CsGy3G007790	Cucumber (Gy14) v2	carcgybB0980
Carg20912	MELO3C005995.2	Melon (DHL92) v3.6.1	carmedB0978
Carg20912	CsaV3_3G007790	Cucumber (Chinese Long) v3	carcucB1037
Carg20912	Cla97C05G080630	Watermelon (97103) v2	carwmbB1047
Carg20912	Bhi01G000384	Wax gourd	carwgoB1162

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20912	Carg25713	Silver-seed gourd	carcarB146

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20912	Cucurbita maxima (Rimu)	carcmaB1371
Carg20912	Watermelon (97103) v2	carwmbB1044