CsGy3G007790 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G007790
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionproline-rich receptor-like protein kinase PERK2
LocationChr3 : 6656128 .. 6657909 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACATATATCTCACTACATTCATCATTTCTTTTTAAATTCTCATATAATATATTTACTGTAATTGTTCATTCATCATGGCGGGTCGTAATTTTGGTCGTCTGTACCGTTTTTCTTCTGCCAACCGACCCTTAGCTCCCGTCACCAATACTTCAGGCCAAGATTCGGCTCAGTACGATGGCCGTCGGTATTCTTCGTCCGCCCGAGACACGTCGCTGGAACCCCGGTCGTCACCGCCACGAGTTGCACTGAGGAGAGATGATCAACCCCTTCCTGCTTCTCCCACGTACTCTATCAAGAAGGCCACTTCTCCCCCGTCTTCTCCGTCGTATAGGGCTCCGGCTGCTCGTGGGATCAGCTCGCCGACTAAGACGGTGGATGAATACCCCAAGTATAAACCTAATACTCAACCCAGGTTGGTTAAACAAATTTAATAAGCTTGCTATTTTATTTTTATTTAGAAAGAAAACAAATTGAATTAATTTGTAGACAAATAATTTATTTTAATTAAGAACATAGATTAGATTTTTGAACTTGCAATTAAAATGTAATTAAATAGCAAAACAAAATTAAACAAGTGAAAACAAATGGAGTTTATAAACATCATCTTGTAATCAATGTTTTGTTTCTAAAAATTAAGTTTAATTTCTCTTCAATTATAAATTAAACTTTTTCAAAAAATAAAAAAATATGTTTTTAAAACTACTTTAATCATAAACAATTTTTAAAATATATAAAACACAGATGTTGAATCAAATAAATTTATAGAATTAGTTGTGAAAAACAAAAGTAGAGTTACTCCTCAAAATAGCTATGAAACGAATCAAAATTTTGATGCTTTAATCATCGTTACACCAACTATTGCATGAATAACAAGTATTTGTTCATATTTTTAACGAAGGTCACCGGAGGCCAAACAAAAACCAGGGATATTCCACAAGAGTACTGTCGAGAAGGTGACGAAATCGGACCGTTATCATGAATCGAGCAAAACGTTGTCATCCCACAAGGGGCAGCTGCAACCAAATGCAATTAACATCAAGGGAGAGAATGTTGGGGCAGTAATGGAAATTGTTGAGTCGTCAAAACGGGAAGGGGGGCATATGATAAAGAAGATCAAAGAGACAGCAAGAGGAATTTTAAACAACAACGACATGGCTAATGATCAAAACAACGAAGCTTCAAAAGCACCTAATTCCTCAATGCCAACAAACACTTTTCTAAATAGCAATTTTCAGAGTGTCAACAATTCCCTTCTTTACAATGCAAATTTGACTCACCGTGATCCCGGTTTACACCTCGCTTTCTCTCGGGACCCGACTGGTGAGCGGTCTGGTGTTGATGATCACAAGAAACAACACCATACAAGATACTAGAGAAAACACAGAGGATGGAGATGAAACAAAATATGATATATTATATATTGTTATATTTTATGAGAATAAAATGAATTTTATATGCTGATTTTATGTAACGAAGAGAAAGATGAGGATTCAAGTTTTATTATTGTGTGGTTCAGTGGTTGGCTTTTGCCATTTCTTTACGTACCTTGAAATAATATATGAGTTTGGATATTCTATATTAGATTTCTCTTCTACGTGTTTTTTCTAAAAAAAATTATACAAGGAATATTAGATCATAGTCTTTCAACGAATAAATGACGTATATTTTAAATGGTCAAACTTCGTTTTGCTTGTAACGGGCTGGTATAGTATAATAAAAAGAGATTTAATGATATATAAGCATAACGCCATCAACACTTTTTATTTATTTATTTTACATTTA

mRNA sequence

ACATATATCTCACTACATTCATCATTTCTTTTTAAATTCTCATATAATATATTTACTGTAATTGTTCATTCATCATGGCGGGTCGTAATTTTGGTCGTCTGTACCGTTTTTCTTCTGCCAACCGACCCTTAGCTCCCGTCACCAATACTTCAGGCCAAGATTCGGCTCAGTACGATGGCCGTCGGTATTCTTCGTCCGCCCGAGACACGTCGCTGGAACCCCGGTCGTCACCGCCACGAGTTGCACTGAGGAGAGATGATCAACCCCTTCCTGCTTCTCCCACGTACTCTATCAAGAAGGCCACTTCTCCCCCGTCTTCTCCGTCGTATAGGGCTCCGGCTGCTCGTGGGATCAGCTCGCCGACTAAGACGGTGGATGAATACCCCAAGTATAAACCTAATACTCAACCCAGGTCACCGGAGGCCAAACAAAAACCAGGGATATTCCACAAGAGTACTGTCGAGAAGGTGACGAAATCGGACCGTTATCATGAATCGAGCAAAACGTTGTCATCCCACAAGGGGCAGCTGCAACCAAATGCAATTAACATCAAGGGAGAGAATGTTGGGGCAGTAATGGAAATTGTTGAGTCGTCAAAACGGGAAGGGGGGCATATGATAAAGAAGATCAAAGAGACAGCAAGAGGAATTTTAAACAACAACGACATGGCTAATGATCAAAACAACGAAGCTTCAAAAGCACCTAATTCCTCAATGCCAACAAACACTTTTCTAAATAGCAATTTTCAGAGTGTCAACAATTCCCTTCTTTACAATGCAAATTTGACTCACCGTGATCCCGGTTTACACCTCGCTTTCTCTCGGGACCCGACTGGTGAGCGGTCTGGTGTTGATGATCACAAGAAACAACACCATACAAGATACTAGAGAAAACACAGAGGATGGAGATGAAACAAAATATGATATATTATATATTGTTATATTTTATGAGAATAAAATGAATTTTATATGCTGATTTTATGTAACGAAGAGAAAGATGAGGATTCAAGTTTTATTATTGTGTGGTTCAGTGGTTGGCTTTTGCCATTTCTTTACGTACCTTGAAATAATATATGAGTTTGGATATTCTATATTAGATTTCTCTTCTACGTGTTTTTTCTAAAAAAAATTATACAAGGAATATTAGATCATAGTCTTTCAACGAATAAATGACGTATATTTTAAATGGTCAAACTTCGTTTTGCTTGTAACGGGCTGGTATAGTATAATAAAAAGAGATTTAATGATATATAAGCATAACGCCATCAACACTTTTTATTTATTTATTTTACATTTA

Coding sequence (CDS)

ATGGCGGGTCGTAATTTTGGTCGTCTGTACCGTTTTTCTTCTGCCAACCGACCCTTAGCTCCCGTCACCAATACTTCAGGCCAAGATTCGGCTCAGTACGATGGCCGTCGGTATTCTTCGTCCGCCCGAGACACGTCGCTGGAACCCCGGTCGTCACCGCCACGAGTTGCACTGAGGAGAGATGATCAACCCCTTCCTGCTTCTCCCACGTACTCTATCAAGAAGGCCACTTCTCCCCCGTCTTCTCCGTCGTATAGGGCTCCGGCTGCTCGTGGGATCAGCTCGCCGACTAAGACGGTGGATGAATACCCCAAGTATAAACCTAATACTCAACCCAGGTCACCGGAGGCCAAACAAAAACCAGGGATATTCCACAAGAGTACTGTCGAGAAGGTGACGAAATCGGACCGTTATCATGAATCGAGCAAAACGTTGTCATCCCACAAGGGGCAGCTGCAACCAAATGCAATTAACATCAAGGGAGAGAATGTTGGGGCAGTAATGGAAATTGTTGAGTCGTCAAAACGGGAAGGGGGGCATATGATAAAGAAGATCAAAGAGACAGCAAGAGGAATTTTAAACAACAACGACATGGCTAATGATCAAAACAACGAAGCTTCAAAAGCACCTAATTCCTCAATGCCAACAAACACTTTTCTAAATAGCAATTTTCAGAGTGTCAACAATTCCCTTCTTTACAATGCAAATTTGACTCACCGTGATCCCGGTTTACACCTCGCTTTCTCTCGGGACCCGACTGGTGAGCGGTCTGGTGTTGATGATCACAAGAAACAACACCATACAAGATACTAG

Protein sequence

MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRYSSSARDTSLEPRSSPPRVALRRDDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQKPGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGHMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHRDPGLHLAFSRDPTGERSGVDDHKKQHHTRY
Homology
[Close]
BLAST of CsGy3G007790 vs. NCBI nr
Match: XP_004133795.1 (PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] >KGN56393.1 hypothetical protein Csa_3G119280 [Cucumis sativus])

HSP 1 Score: 519.2 bits (1336), Expect = 8.2e-144
Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0 

Query: 1   MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRYSSSARDTSLEPRSSPPRVALRR 60
           MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRY SSARDTSLEPRSSPPRVALRR
Sbjct: 1   MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALRR 60

Query: 61  DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK 120
           DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK
Sbjct: 61  DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK 120

Query: 121 PGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGH 180
           PGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGH
Sbjct: 121 PGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGH 180

Query: 181 MIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHR 240
           MIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHR
Sbjct: 181 MIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHR 240

Query: 241 DPGLHLAFSRDPTGERSGVDDHKKQHHTRY 271
           DPGLHLAFSR+PTGERSGVDDHKKQHHTRY
Sbjct: 241 DPGLHLAFSRNPTGERSGVDDHKKQHHTRY 270

[Close]
BLAST of CsGy3G007790 vs. NCBI nr
Match: XP_008437848.1 (PREDICTED: uncharacterized protein LOC103483156 [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 9.7e-121
Identity = 234/270 (86.67%), Postives = 247/270 (91.48%), Query Frame = 0 

Query: 1   MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRYSSSARDTSLEPRSSPPRVALRR 60
           MAGRNFGR+YRFSSANRPLAP TNTSGQDSAQYD R+Y S+ RDTSLEPRSSPPR++LR+
Sbjct: 1   MAGRNFGRMYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLRK 60

Query: 61  DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK 120
           DD PLPASPTYSIKKATSPPSSP YR  AAR ISSP K VDEYPKYKP TQPRSPEAKQK
Sbjct: 61  DDPPLPASPTYSIKKATSPPSSPPYRGMAAREISSPPKMVDEYPKYKPITQPRSPEAKQK 120

Query: 121 PGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGH 180
           PGI   +TVEKVTKSDRYHE SK +SSHKGQ QPNAINIKGENVGAVMEIVESSKREGGH
Sbjct: 121 PGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQ-QPNAINIKGENVGAVMEIVESSKREGGH 180

Query: 181 MIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHR 240
           MIKKIKETARGILNNNDMANDQNNEASK  NSSMPTNTFLNSNFQSVNNSLLYNANLT+R
Sbjct: 181 MIKKIKETARGILNNNDMANDQNNEASKTTNSSMPTNTFLNSNFQSVNNSLLYNANLTYR 240

Query: 241 DPGLHLAFSRDPTGERSGVDDHKKQHHTRY 271
           DPGLHL+FSR+PTG+R  VDD KKQHHT+Y
Sbjct: 241 DPGLHLSFSRNPTGDRFPVDD-KKQHHTKY 268

[Close]
BLAST of CsGy3G007790 vs. NCBI nr
Match: XP_022147459.1 (serine/arginine repetitive matrix protein 1-like [Momordica charantia])

HSP 1 Score: 241.5 bits (615), Expect = 3.3e-60
Identity = 149/277 (53.79%), Postives = 177/277 (63.90%), Query Frame = 0 

Query: 1   MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRYSSSARDTSLEPRSSPPRVALRR 60
           MAGR     YRFSS NRPLAP  NTS QDSAQYDGR+Y S+ RD+S+EPR+  P  + RR
Sbjct: 1   MAGRYGRSFYRFSSVNRPLAPGGNTSAQDSAQYDGRQYPSATRDSSVEPRARSPPFSPRR 60

Query: 61  DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK 120
           +    PA   YS+                      P + VDEYPKYKP TQPRSPEA QK
Sbjct: 61  ES--YPAXXXYSVXXXXXXXXXXXXXXXXXXXXXXPPRLVDEYPKYKPTTQPRSPEADQK 120

Query: 121 PGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQ-PNAINIKGENVGAVMEIVESSKREGG 180
           P + +K+  +  TKSDRY E+ KT SS K Q Q PNAINI GEN+GAVMEIV+S KREGG
Sbjct: 121 P-VIYKAIEKATTKSDRYPETGKTTSSQKQQQQKPNAINISGENLGAVMEIVQSPKREGG 180

Query: 181 HMIKKIKETARGILNNNDM------ANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLY 240
           H+I+K KE+    L++ND                      +P NTFLNSNFQSVNNSLLY
Sbjct: 181 HIIRK-KESRGSTLHSNDQXXXXXXXXXXXXXXXXXXXXXLPANTFLNSNFQSVNNSLLY 240

Query: 241 NANLTHRDPGLHLAFSRDPTGERSGVDDHKKQHHTRY 271
           NA+L HRDPGLHLAF+R+P G+R   DD  K+HH +Y
Sbjct: 241 NASLAHRDPGLHLAFARNPAGDRFAADD--KKHHPKY 271

[Close]
BLAST of CsGy3G007790 vs. NCBI nr
Match: XP_022945689.1 (uncharacterized protein LOC111449843 [Cucurbita moschata])

HSP 1 Score: 169.5 bits (428), Expect = 1.6e-38
Identity = 127/253 (50.20%), Postives = 156/253 (61.66%), Query Frame = 0 

Query: 1   MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRYSSSARDTSLEPRSSPPRVALRR 60
           MAGR    ++R SS  RP     + S QDS QYDG RY S+ +++S+EPR+  P ++ +R
Sbjct: 1   MAGRLRRSMFRLSSFKRPFIHGGSNSRQDSGQYDG-RYPSTRKESSMEPRARSPSLSPKR 60

Query: 61  DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK 120
           +   + ASPTYS+KK  SP  SPSY   +   +SS  K VDE  K KP TQPRSPE + K
Sbjct: 61  ES--VAASPTYSVKKVASPSPSPSYGGSSGGVMSSQPKAVDEDLKDKPTTQPRSPETEPK 120

Query: 121 PGIFHKSTVEKVTKSDRYHESSK-TLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGG 180
             +  K+T +KVT SDR  ESSK T++SHK   +PN I I GEN GAVMEI E  K E G
Sbjct: 121 -AVVGKAT-KKVTDSDRRIESSKTTMTSHKH--EPNTIKIAGENHGAVMEIFE-LKGEEG 180

Query: 181 HMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTH 240
            MI+K KE  R  LN    A DQN E  K        +T+LNSN Q VNNS+LY A+L H
Sbjct: 181 DMIEK-KERFRRTLNRK--AKDQNKEGCKDQKGE---STYLNSNVQGVNNSILYGASLAH 239

Query: 241 RDPGLHLAFSRDP 253
            DPGLH A S  P
Sbjct: 241 HDPGLHHALSLKP 239

[Close]
BLAST of CsGy3G007790 vs. NCBI nr
Match: XP_022979312.1 (uncharacterized protein LOC111479075 isoform X1 [Cucurbita maxima])

HSP 1 Score: 165.6 bits (418), Expect = 2.3e-37
Identity = 105/166 (63.25%), Postives = 127/166 (76.51%), Query Frame = 0 

Query: 112 PRSPEAKQKPGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIV 171
           P+SPE KQK  + HK  VEK  KS+RY +S +T    K Q QPNAINI GENVGAVMEIV
Sbjct: 61  PKSPEPKQK-AMVHKG-VEKAAKSERYLDSGRT---QKAQ-QPNAINIAGENVGAVMEIV 120

Query: 172 ESSKREGGHMIKKIKETARGILNN-NDMANDQNNEAS--------KAP-NSSMPTNTFLN 231
           ESSK EGGH++KK KET RG+++N +D  NDQ+ +AS        KAP +SS+PT TFLN
Sbjct: 121 ESSKGEGGHVMKK-KETPRGVVSNADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTFLN 180

Query: 232 SNFQSVNNSLLYNANLTHRDPGLHLAFSRDPTGERSGVDDHKKQHH 268
           +NFQSVNNSLL++A+L HRDPGLHLAFSR+ TG+R  +DD KKQHH
Sbjct: 181 NNFQSVNNSLLFDASLAHRDPGLHLAFSRNRTGDRFTLDD-KKQHH 218

[Close]
BLAST of CsGy3G007790 vs. TAIR10
Match: AT2G46630.1 (unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 6.1e-08
Identity = 38/122 (31.15%), Postives = 55/122 (45.08%), Query Frame = 0 

Query: 146 SSHKGQLQPNAINIKGENVGAVMEIVES---SKREG------------GHMIKKIKETAR 205
           S  +  +    I I GEN GAVMEI+ S   +K  G            G   ++++    
Sbjct: 254 SDSENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSGTHSSRVSHGTGEKGRRLQXXXX 313

Query: 206 GILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHRDPGLHLAFSR 253
                               NS++P   F+NSN Q +NNS++YN+  +H DPG+HL  SR
Sbjct: 314 XXXXXXXXXXXXTKNVPNKGNSNLPMKAFMNSNVQMINNSIVYNSTASHHDPGVHLKISR 373

[Close]
BLAST of CsGy3G007790 vs. TrEMBL
Match: tr|A0A0A0L3R5|A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 5.4e-144
Identity = 268/270 (99.26%), Postives = 269/270 (99.63%), Query Frame = 0 

Query: 1   MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRYSSSARDTSLEPRSSPPRVALRR 60
           MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRY SSARDTSLEPRSSPPRVALRR
Sbjct: 1   MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALRR 60

Query: 61  DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK 120
           DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK
Sbjct: 61  DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK 120

Query: 121 PGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGH 180
           PGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGH
Sbjct: 121 PGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGH 180

Query: 181 MIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHR 240
           MIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHR
Sbjct: 181 MIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHR 240

Query: 241 DPGLHLAFSRDPTGERSGVDDHKKQHHTRY 271
           DPGLHLAFSR+PTGERSGVDDHKKQHHTRY
Sbjct: 241 DPGLHLAFSRNPTGERSGVDDHKKQHHTRY 270

[Close]
BLAST of CsGy3G007790 vs. TrEMBL
Match: tr|A0A1S3AVL1|A0A1S3AVL1_CUCME (uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 6.4e-121
Identity = 234/270 (86.67%), Postives = 247/270 (91.48%), Query Frame = 0 

Query: 1   MAGRNFGRLYRFSSANRPLAPVTNTSGQDSAQYDGRRYSSSARDTSLEPRSSPPRVALRR 60
           MAGRNFGR+YRFSSANRPLAP TNTSGQDSAQYD R+Y S+ RDTSLEPRSSPPR++LR+
Sbjct: 1   MAGRNFGRMYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLRK 60

Query: 61  DDQPLPASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAKQK 120
           DD PLPASPTYSIKKATSPPSSP YR  AAR ISSP K VDEYPKYKP TQPRSPEAKQK
Sbjct: 61  DDPPLPASPTYSIKKATSPPSSPPYRGMAAREISSPPKMVDEYPKYKPITQPRSPEAKQK 120

Query: 121 PGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSKREGGH 180
           PGI   +TVEKVTKSDRYHE SK +SSHKGQ QPNAINIKGENVGAVMEIVESSKREGGH
Sbjct: 121 PGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQ-QPNAINIKGENVGAVMEIVESSKREGGH 180

Query: 181 MIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHR 240
           MIKKIKETARGILNNNDMANDQNNEASK  NSSMPTNTFLNSNFQSVNNSLLYNANLT+R
Sbjct: 181 MIKKIKETARGILNNNDMANDQNNEASKTTNSSMPTNTFLNSNFQSVNNSLLYNANLTYR 240

Query: 241 DPGLHLAFSRDPTGERSGVDDHKKQHHTRY 271
           DPGLHL+FSR+PTG+R  VDD KKQHHT+Y
Sbjct: 241 DPGLHLSFSRNPTGDRFPVDD-KKQHHTKY 268

[Close]
BLAST of CsGy3G007790 vs. TrEMBL
Match: tr|A0A1S3AV38|A0A1S3AV38_CUCME (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-16
Identity = 92/266 (34.59%), Postives = 123/266 (46.24%), Query Frame = 0 

Query: 45  TSLEPRSSPPRVALRRDDQPLPASPTYSIKKATSPPSSPSY--------RAPAARGISSP 104
           T   P  + PR   R   +PL + P    KKATSP +SP Y        R+PAA+   SP
Sbjct: 41  TITTPAPASPR---RESPRPLSSPP----KKATSPFASPKYGDSRTRLDRSPAAKATMSP 100

Query: 105 TKTV-DEY---------PKYKP---------------------------NTQPRSPEAKQ 164
             +V D+Y         P   P                             QPR     +
Sbjct: 101 PDSVRDKYFERRNGETTPPLSPAKSRRAKTXXXXPLALPRNQVFTGNGTTAQPRVQPEVE 160

Query: 165 KPGIFHKSTVEKVTKSDRYHESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSK--RE 224
             GI +  TVEK +KS+R      +  SH+ + +P  I +KG NVGAVMEI +SS   R 
Sbjct: 161 TKGIVYNKTVEKPSKSNRSSGEYGSSKSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRL 220

Query: 225 GGHMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANL 264
           GG  +KK +    G ++     + +     K P    P   F+NSNFQSVNNSLL++++ 
Sbjct: 221 GGETLKKNETEDVGDVHGYGHEDKKTETKKKEP----PITAFMNSNFQSVNNSLLFDSSC 280

[Close]
BLAST of CsGy3G007790 vs. TrEMBL
Match: tr|A0A0A0L320|A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-14
Identity = 86/247 (34.82%), Postives = 120/247 (48.58%), Query Frame = 0 

Query: 40  SSARDTSLEPRSSPPRVALRRDDQPLPASPTYSIKKATSPPSSPSYR----------APA 99
           +S R  S  P SSP + A       + +SP  + K   SPP S   +           P 
Sbjct: 48  ASPRRESPRPLSSPSKKATSPFASRVDSSP--AAKATRSPPDSIGDKYLERRNGETTPPL 107

Query: 100 ARGISSPTKTVDEYPKYKPNT----------QPR-SPEAKQKPGIFHKSTVEKVTKSDRY 159
               S P KT    P   P +          QPR  PE + K  +++K+  EK +KS+R 
Sbjct: 108 TPAKSRPAKTSPLSPLALPRSQVITGNGTTAQPRVQPEVETKGIVYNKAADEKPSKSNRQ 167

Query: 160 HESSKTLSSHKGQLQPNAINIKGENVGAVMEIVESSK--REGGHMIKKIKETARGILNNN 219
            E     S H+ Q +P  + +KG NVGAVME+ +SS   R GG  +KK KET     ++ 
Sbjct: 168 SEHGSGKSVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGETLKK-KETE----DDG 227

Query: 220 DMANDQNNEASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHRDPGLHLAFSRDPTGER 264
           D+    + +         P + F+NSNFQSVNNSLL++++  HRDPGLHL+F     G  
Sbjct: 228 DVDGYGHEDKKTGRKKKPPISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLSFPNAADGGG 287

[Close]
BLAST of CsGy3G007790 vs. TrEMBL
Match: tr|A0A0A0L8G8|A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 6.4e-12
Identity = 78/229 (34.06%), Postives = 116/229 (50.66%), Query Frame = 0 

Query: 49  PRSSPPRVALRRDDQPL-PASPTYSIKKATSPPSSPSYRAPAARGISSPTKTVDEYPKYK 108
           PR SPP  + + +   +  ASP   +K A SPP SP  ++   R   SP    +     +
Sbjct: 67  PRISPPAASPKYEATVIREASP--PLKPARSPPVSPPRKSVDPRHSISPNSYQEPLKPTR 126

Query: 109 PNTQ----PRSPEAKQKPGIFHKSTVEKVTKSDRYHESSKTLSSHKGQ----LQPNAINI 168
           P+      P+S +    P    K  VE+  K+D + +S + + +   +    LQ  AIN+
Sbjct: 127 PSLSTLALPKSADVTTVPSAI-KPEVEQ--KTDSFKKSDRQVDNVSAKPPPSLQAKAINL 186

Query: 169 KGENVGAVMEIVE-SSKREGGHMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPTNT 228
            G+N+GAVM+I + S K  GG + +KI ET  G+   NDM   +         +  P   
Sbjct: 187 TGDNIGAVMKINQFSDKISGGEVTRKI-ETKTGVQQENDMEKSRR-------ETEFPMTP 246

Query: 229 FLNSNFQSVNNSLLYNANLTHRDPGLHLAFSRDPTGERSGVDDHKKQHH 268
             NSNFQ VNNS++YN++ + RDPGLHL FS     E + VD +KK  +
Sbjct: 247 ITNSNFQEVNNSVMYNSSCSGRDPGLHLDFS-GQKDEAATVDGNKKSKY 281

The following BLAST results are available for this feature:
BLAST of CsGy3G007790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133795.18.2e-14499.26PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus] >K... [more]
XP_008437848.19.7e-12186.67PREDICTED: uncharacterized protein LOC103483156 [Cucumis melo][more]
XP_022147459.13.3e-6053.79serine/arginine repetitive matrix protein 1-like [Momordica charantia][more]
XP_022945689.11.6e-3850.20uncharacterized protein LOC111449843 [Cucurbita moschata][more]
XP_022979312.12.3e-3763.25uncharacterized protein LOC111479075 isoform X1 [Cucurbita maxima][more]
BLAST of CsGy3G007790 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46630.16.1e-0831.15unknown protein[more]
BLAST of CsGy3G007790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G007790 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3R5|A0A0A0L3R5_CUCSA5.4e-14499.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1[more]
tr|A0A1S3AVL1|A0A1S3AVL1_CUCME6.4e-12186.67uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=... [more]
tr|A0A1S3AV38|A0A1S3AV38_CUCME1.1e-1634.59zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1[more]
tr|A0A0A0L320|A0A0A0L320_CUCSA1.1e-1434.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1[more]
tr|A0A0A0L8G8|A0A0A0L8G8_CUCSA6.4e-1234.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G007790.1CsGy3G007790.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..270
NoneNo IPR availablePANTHERPTHR33472FAMILY NOT NAMEDcoord: 25..268

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G007790Cla021125Watermelon (97103) v1cgybwmB217
CsGy3G007790Csa3G119280Cucumber (Chinese Long) v2cgybcuB109
CsGy3G007790MELO3C005995Melon (DHL92) v3.5.1cgybmeB200
CsGy3G007790ClCG05G000580Watermelon (Charleston Gray)cgybwcgB203
CsGy3G007790CSPI03G07650Wild cucumber (PI 183967)cgybcpiB110
CsGy3G007790CmaCh06G009850Cucurbita maxima (Rimu)cgybcmaB443
CsGy3G007790CmaCh14G021290Cucurbita maxima (Rimu)cgybcmaB318
CsGy3G007790CmoCh14G021920Cucurbita moschata (Rifu)cgybcmoB290
CsGy3G007790CmoCh06G010180Cucurbita moschata (Rifu)cgybcmoB401
CsGy3G007790Cp4.1LG03g15870Cucurbita pepo (Zucchini)cgybcpeB406
CsGy3G007790MELO3C005995.2Melon (DHL92) v3.6.1cgybmedB201
CsGy3G007790CsaV3_3G007790Cucumber (Chinese Long) v3cgybcucB117
CsGy3G007790Cla97C05G080630Watermelon (97103) v2cgybwmbB196
CsGy3G007790Carg25713Silver-seed gourdcarcgybB0131
CsGy3G007790Carg20912Silver-seed gourdcarcgybB0980
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G007790Cucumber (Gy14) v2cgybcgybB085
CsGy3G007790Cucurbita maxima (Rimu)cgybcmaB401
CsGy3G007790Cucurbita maxima (Rimu)cgybcmaB430
CsGy3G007790Cucurbita moschata (Rifu)cgybcmoB372
CsGy3G007790Cucurbita moschata (Rifu)cgybcmoB430
CsGy3G007790Cucurbita pepo (Zucchini)cgybcpeB428
CsGy3G007790Cucurbita pepo (Zucchini)cgybcpeB454
CsGy3G007790Cucumber (Chinese Long) v2cgybcuB125
CsGy3G007790Bottle gourd (USVL1VR-Ls)cgyblsiB137
CsGy3G007790Bottle gourd (USVL1VR-Ls)cgyblsiB196
CsGy3G007790Melon (DHL92) v3.5.1cgybmeB142
CsGy3G007790Melon (DHL92) v3.6.1cgybmedB139
CsGy3G007790Watermelon (Charleston Gray)cgybwcgB189
CsGy3G007790Watermelon (97103) v1cgybwmB243
CsGy3G007790Wild cucumber (PI 183967)cgybcpiB126
CsGy3G007790Cucumber (Chinese Long) v3cgybcucB130
CsGy3G007790Watermelon (97103) v2cgybwmbB166
CsGy3G007790Wax gourdcgybwgoB249
CsGy3G007790Wax gourdcgybwgoB272