CmaCh11G017070 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCGGAAAATTACTTCTTCCAAACCTGCTTGGCTGAGATTGTATGGCAAGGACTTCTGTGCAGGCGAATGCATTGCTTTTTAGGTAATAATCATCTTGTTTTTGTTATGCTTTTGTTTCTTTCTTTTGTTCTTTTAACGGGGTCGGAGTCATGCATGAACCTGCCCTAGAAATGACGAGGGAGAAAGGAGAGGTTTCTCCCCGTTATCTATGTTGGATGATGAAAGTTCCACATCGGCTAATTTAGGAAATGATCATGAGTTTATAAGTGAGGAATACTAACTCCATTGGTATGAGGCCTTTTGGGAAGCCCAAAGCAAAGCCATGAGAACCACACTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAAGAATCTAAACAGGTCGATAGATAGTAATTACATTCCTCGTTCCGTCATGACCTAGTCTTTGCCTCACTCCACTTTTATATAAAAATAAAAGTATATTATTGTAACAGTCTAAGCCCATTGCTAGCAGTTATAGTCCGGTTTGACCCGTTACGTATTGTCATCCCTCACGATTTTAAAACGCGTATACTAAGGAGAGGTTTCCACACTCTAATAAGAGTGTTTCATTTCCTACTCCAGCCGGTGTGAGATCTCACAATCGCGTATACTAAGGAGAGGTTTCCACACTCTAATAAGAGTGTTTCATTTCCTACTCCAGCCGGTGTGAGATCTCACAATCCACTCCATTTCCACACTCTAATAAGAGTGTTTCATTTCCTACTCCAACCGGTGTGAGATGTCACAATCCACCCCCCTTGGAGTCCCAGCGTCCTTGCTGGCACATAGCTTGGTGTTTGGCACCCACTACTAGCAAATATTATCTGGTTTGACTCGTTACGTATCATCATTAGCCTCACGGTTTTAAAACGCGTCTATTAGGGAGAAGTTTTCACACTCTTATAATATATTTCGTTTTCTACTCCAAGCCATATGAGATCTCACAATCCACCCCCCTTGAAGTCTCAACGTCCTTGCTAGCTCACCGCTTGGTGTCTAGCACCCACTGCTAGCGAATATTATCTGCTTTGACCCGTTACGTATCATCGTTAACCTCACGGTTTTAAAATGCGTTTACTAGGGAGAGGTTTCCACACTCTTATAAGAATGTTTCGTTCCCCACTCCAACCGATGTGAGATCTCACAATCCCCACCCTCTTTAGGATCCTAACGTCCTCATTGGCACACCACTCAGTGTCTGGCACCCACCGCTAACAAATATTGTCCGCTTTAACCTATTATGTATCACCGTCAACCTCACAGTTTTAAAACGTGTCTACTAGAGAGAGATTTTCACACTCTTATAAGAATGTTTCGTTCATTCTCCACTCCAACTGGTGTGGAATCTCACAATCTACCCCTTTAGGATCCCAGCGTCCTCGCTGACACACCGCTCAATGTCTGACACCCAATCTCTAGCATATATTATCCCCTTTCTCACGTTTACTAGGGAGAGGTTTCTACACTGTTATAAGAGCGTTTCGTTTCACACTCCAACCGATGTGAGATCTGACAATCATTAAATATTTGTTACAAAGATATACGAGTTCAAACACGTGTCTCAATCAAGTAAATGAGACAATAATGATCTCTTTTTGCAGGAAAGTGAAGCAATTGAGGCGCCAATTCAGCAGCCTTGCAAATAGCTCACATAATAAAGAGGAGACAGAAACAGAGCCATTGTCCTATAACTCATCAACGTGGGTGCCCCATCCCCGGACTGGAATATACTTCCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCAGCTTCCTTCTCTCCCGTTTTCTGGTTCCGGGATTTCGATGGCGTCGACGACCTAAACCCCGACACTCATCCCTCTCCCGGACCTCGGCTTGCTGCTGTTTTAGGTGCCACCCAGGATTGATCTTGGGGGAAGATGGCTATCAACTTGAGAGTTAGCATAGGTGTTTAAAGTTGGGAGTATGGATGGCCAATCACCAAATTGGCCTAGGAATAATGTAAAGTATGATGGTGTATTGATCACTCACATCTTCCATAATAAAGTGAATAAATAAGTAATCTATCAATTTAGAGGTACATAAATGAACCAGAACTACATCTAGTCGAGATGATCCTTAGGATAAGATAGCTAAGAAAGACTTTAAAAAATTGAAAGTTACTATTTATACCAATAAAGTG CCCGGAAAATTACTTCTTCCAAACCTGCTTGGCTGAGATTGTATGGCAAGGACTTCTGTGCAGGCGAATGCATTGCTTTTTAGGAAAGTGAAGCAATTGAGGCGCCAATTCAGCAGCCTTGCAAATAGCTCACATAATAAAGAGGAGACAGAAACAGAGCCATTGTCCTATAACTCATCAACGTGGGTGCCCCATCCCCGGACTGGAATATACTTCCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCAGCTTCCTTCTCTCCCGTTTTCTGGTTCCGGGATTTCGATGGCGTCGACGACCTAAACCCCGACACTCATCCCTCTCCCGGACCTCGGCTTGCTGCTGTTTTAGGTGCCACCCAGGATTGATCTTGGGGGAAGATGGCTATCAACTTGAGAGTTAGCATAGGTGTTTAAAGTTGGGAGTATGGATGGCCAATCACCAAATTGGCCTAGGAATAATGTAAAGTATGATGGTGTATTGATCACTCACATCTTCCATAATAAAGTGAATAAATAAGTAATCTATCAATTTAGAGGTACATAAATGAACCAGAACTACATCTAGTCGAGATGATCCTTAGGATAAGATAGCTAAGAAAGACTTTAAAAAATTGAAAGTTACTATTTATACCAATAAAGTG ATGGCAAGGACTTCTGTGCAGGCGAATGCATTGCTTTTTAGGAAAGTGAAGCAATTGAGGCGCCAATTCAGCAGCCTTGCAAATAGCTCACATAATAAAGAGGAGACAGAAACAGAGCCATTGTCCTATAACTCATCAACGTGGGTGCCCCATCCCCGGACTGGAATATACTTCCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCAGCTTCCTTCTCTCCCGTTTTCTGGTTCCGGGATTTCGATGGCGTCGACGACCTAAACCCCGACACTCATCCCTCTCCCGGACCTCGGCTTGCTGCTGTTTTAGGTGCCACCCAGGATTGA MARTSVQANALLFRKVKQLRRQFSSLANSSHNKEETETEPLSYNSSTWVPHPRTGIYFPQGHEWVMKDVPENAASFSPVFWFRDFDGVDDLNPDTHPSPGPRLAAVLGATQD
BLAST of CmaCh11G017070 vs. TrEMBL
Match: A0A0A0K7S0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071500 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.2e-27 Identity = 65/100 (65.00%), Postives = 73/100 (73.00%), Query Frame = 1
BLAST of CmaCh11G017070 vs. TrEMBL
Match: A0A0S3SMD8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G048400 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 5.3e-15 Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 1
BLAST of CmaCh11G017070 vs. TrEMBL
Match: A0A0L9U0M8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g238200 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 5.3e-15 Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 1
BLAST of CmaCh11G017070 vs. TrEMBL
Match: A0A0B0MFA5_GOSAR (Glutamate racemase OS=Gossypium arboreum GN=F383_14699 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.6e-14 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 1
BLAST of CmaCh11G017070 vs. TrEMBL
Match: M4T4A6_ARAHY (Uncharacterized protein OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.6e-14 Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 1
BLAST of CmaCh11G017070 vs. TAIR10
Match: AT3G19550.1 (AT3G19550.1 unknown protein) HSP 1 Score: 77.8 bits (190), Expect = 4.7e-15 Identity = 49/109 (44.95%), Postives = 60/109 (55.05%), Query Frame = 1
BLAST of CmaCh11G017070 vs. NCBI nr
Match: gi|659110055|ref|XP_008455025.1| (PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo]) HSP 1 Score: 132.9 bits (333), Expect = 3.5e-28 Identity = 68/107 (63.55%), Postives = 80/107 (74.77%), Query Frame = 1
BLAST of CmaCh11G017070 vs. NCBI nr
Match: gi|778724901|ref|XP_011658881.1| (PREDICTED: uncharacterized protein LOC105436102 [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 1.0e-27 Identity = 66/103 (64.08%), Postives = 74/103 (71.84%), Query Frame = 1
BLAST of CmaCh11G017070 vs. NCBI nr
Match: gi|700188628|gb|KGN43861.1| (hypothetical protein Csa_7G071500 [Cucumis sativus]) HSP 1 Score: 130.6 bits (327), Expect = 1.7e-27 Identity = 65/100 (65.00%), Postives = 73/100 (73.00%), Query Frame = 1
BLAST of CmaCh11G017070 vs. NCBI nr
Match: gi|743858129|ref|XP_011030368.1| (PREDICTED: uncharacterized protein LOC105129833 [Populus euphratica]) HSP 1 Score: 89.0 bits (219), Expect = 5.8e-15 Identity = 36/48 (75.00%), Postives = 40/48 (83.33%), Query Frame = 1
BLAST of CmaCh11G017070 vs. NCBI nr
Match: gi|920693007|gb|KOM36232.1| (hypothetical protein LR48_Vigan02g238200 [Vigna angularis]) HSP 1 Score: 88.6 bits (218), Expect = 7.6e-15 Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |