Cla97C02G033670 (gene) Watermelon (97103) v2

NameCla97C02G033670
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionLate embryogenesis abundant protein Lea5, putative
LocationCla97Chr02 : 7203549 .. 7205445 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGAACTTGTATGGCTATGCAGGCAAATGCATTGTTTCTTAGGTAAAATAATCTTGGCTCTTTTGAGTGATTTGATTTTGTCATTTTCTTTGAGTGGAATGGTATGTGGGGTCTAAACGTTCTAACTTTTTGATTTCGACTATGAGTATATATCTAAATTAGTTGAACTATGTTCAAATTATTGGTAAAAGTATCATACTTATGTTTATATATTATATTGGTTAAAATACTATTTTGGTTCTTACACTGGAAGATTTGTTTAATTTTTAGTCTCTGTATTTTTAATAAATCTTAAATTTAGTCTCTCAAAGTTTTGTTTTTTTTTTTTTTTTTGTCAAAATTTGTTAAATAATAATAAGAATTTTTAGGCAAGAAAATTAGTGAAATTTCTAATTTGGATAATAAAGTTTTTAAAAAATCAACAATAAACAAACATAATAACTAAATTTAAGATTTATTAAAAGTAAAAGGGCTAAAATGGAAAATGTGAAAGTAACTAGATTAAAATTGAACAAGGTTTAATATACTTTTGATTTTGGTTCATTTTGGTTCATGTACTTTCAAAATGTTCATTTTGATCCTTATACTTTCAACTTTAGTTCATTTTTGTCCTTATACTTTCAAAATGTTTATTTTGGTCTTTGTACTTTCAACTTTTGTTCATTTTGGTTCTTGAACTTTCAAAAAGTAATTATTTTGATCCCTTAAAAATGAAATAAAAATCAAAATGAAAGGATAAAAATAGTTACTTTTAAAAAGTATAAGGACCAAATTGAACCAAAATTAAGTATAGAGACCAAAATGAACAAAATTGAAAATATAGAGACCACAATGAATAAAATTGAAAATATAGAGACCAAAATGAATATTTTAAAAAAACATAAACCAAAATAAATCGAAATTAGAAATATAGGAATATTTACACAATTAAACAAACAACCTCCAATTGCCTATTATATTCTAGTTTTTTTTTTTTTTTTTTTTTTAATTGGCTCAGAAGAAAGTCTATAAATGAAAGTGTTTGTGGAATTTAGAAGTCTATATGAGTAGAAGAAAGTGATTGTGGAAAAGAAAAAGGTACTCTATGAGAAAGTGGATGGAAAAAGAAAGTTGCACCTTTATTTTTATTTTTTATTTTTTATTTTTTTCCCTTCTTGCTGTTTCTTTTTTAAACATAGTTTATCATTTCATTTCACCATGATTAAGCTAGCTATGTTGATGGTGCTTTTGGGGATTACTAAAAGGGAACTTTTGTTAGGATAAAAACCTAGTTTCCATTCAAATTTGATTTTAAAAGTTGAAAACACTTTAACTTTAAAGTGTTTTATGGAAAAGTATTGTGTGGTAACTGTGGTTTTAGTTTCAAGTGCTTCACAAAATTGTATAACCATTGATAAATGTAAATTCTTTTATTTAGTACTTTTTATGAAAGTACTTTGGCTAAATTGCTTATTTTAAAAAAATGATTAAACACCCTATTACATATATAATTTCAAATACCCATTTATTCTACATATTTGAATAAATAAACCAATTAACAAAAGATATTTGAAACTCCTAATTAGTTATATGACAGGAAAATGAAACAATTGAAGCGACAATTCAGCAGTGTTGTAATTGAGTCCACAAGCCAACAAGCCCCACATCAAAAAAATGATGAAACAGAAACAGAGCCACAACCCTACAACTCATCCAATTGGGTTCCCCACCCTCGTACTGGAATCTATTTTCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCCGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGACATCGACAACTTGAACCCCGACAACGATATCTCTCTGAGGCCTCGATTCGCCATTGTTTTCGGCCGCCATGATTGA

mRNA sequence

ATGGCAAGAACTTGTATGGCTATGCAGGCAAATGCATTGTTTCTTAGGAAAATGAAACAATTGAAGCGACAATTCAGCAGTGTTGTAATTGAGTCCACAAGCCAACAAGCCCCACATCAAAAAAATGATGAAACAGAAACAGAGCCACAACCCTACAACTCATCCAATTGGGTTCCCCACCCTCGTACTGGAATCTATTTTCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCCGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGACATCGACAACTTGAACCCCGACAACGATATCTCTCTGAGGCCTCGATTCGCCATTGTTTTCGGCCGCCATGATTGA

Coding sequence (CDS)

ATGGCAAGAACTTGTATGGCTATGCAGGCAAATGCATTGTTTCTTAGGAAAATGAAACAATTGAAGCGACAATTCAGCAGTGTTGTAATTGAGTCCACAAGCCAACAAGCCCCACATCAAAAAAATGATGAAACAGAAACAGAGCCACAACCCTACAACTCATCCAATTGGGTTCCCCACCCTCGTACTGGAATCTATTTTCCTCAGGGCCATGAGTGGGTCATGAAGGATGTCCCTGAAAATGCCGCTTCCTTCTCTCGACTTTGTTGGTTTCGGGATTCTGATGACATCGACAACTTGAACCCCGACAACGATATCTCTCTGAGGCCTCGATTCGCCATTGTTTTCGGCCGCCATGATTGA

Protein sequence

MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLRPRFAIVFGRHD
BLAST of Cla97C02G033670 vs. NCBI nr
Match: XP_011658881.1 (PREDICTED: uncharacterized protein LOC105436102 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 7.6e-41
Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPH 60
           M RT M +QAN LFLRKMKQLK QF  +VI+STSQQA ++K+DETETE  PYNSS WVPH
Sbjct: 1   MGRTRMPLQANPLFLRKMKQLKWQFRGLVIDSTSQQALNKKDDETETESLPYNSSTWVPH 60

Query: 61  PRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDIS 108
           PRTGIYFPQGHEWVMKD+PENAASF RLCWFRDSDD+D+LNPD D S
Sbjct: 61  PRTGIYFPQGHEWVMKDIPENAASFPRLCWFRDSDDVDDLNPDKDTS 107

BLAST of Cla97C02G033670 vs. NCBI nr
Match: XP_008455025.1 (PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo])

HSP 1 Score: 175.3 bits (443), Expect = 1.3e-40
Identity = 83/109 (76.15%), Postives = 97/109 (88.99%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPH 60
           M+RT + +QAN LFLRKMKQLKRQF S+VI+STSQQ  ++K+DETET+  PYNSS WVPH
Sbjct: 1   MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPH 60

Query: 61  PRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLR 110
           PRTGIYFPQGHEWVMKD+PENAASFSRLCWFRDSDD+D+LN +N+ S R
Sbjct: 61  PRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSR 109

BLAST of Cla97C02G033670 vs. NCBI nr
Match: KGN43861.1 (hypothetical protein Csa_7G071500 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 0

Query: 6   MAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGI 65
           M +QAN LFLRKMKQLK QF  +VI+STSQQA ++K+DETETE  PYNSS WVPHPRTGI
Sbjct: 1   MPLQANPLFLRKMKQLKWQFRGLVIDSTSQQALNKKDDETETESLPYNSSTWVPHPRTGI 60

Query: 66  YFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDIS 108
           YFPQGHEWVMKD+PENAASF RLCWFRDSDD+D+LNPD D S
Sbjct: 61  YFPQGHEWVMKDIPENAASFPRLCWFRDSDDVDDLNPDKDTS 102

BLAST of Cla97C02G033670 vs. NCBI nr
Match: XP_022148740.1 (uncharacterized protein LOC111017332 [Momordica charantia])

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-37
Identity = 78/114 (68.42%), Postives = 93/114 (81.58%), Query Frame = 0

Query: 7   AMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIY 66
           A++ANA+ LR+MKQL+RQFSS  +ES +++   Q+ D  ETEP PYNSS WVPHPRTGIY
Sbjct: 48  AVKANAILLRRMKQLRRQFSSFAMESKAKEEALQEED-IETEPWPYNSSTWVPHPRTGIY 107

Query: 67  FPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLRPRFAIVFGRHD 121
           FPQGHEWVMKDVPENAASFSR+CWFRDSD +D+ NPD + S+ PRFA  FG  D
Sbjct: 108 FPQGHEWVMKDVPENAASFSRVCWFRDSDGVDDPNPDQNPSVGPRFAAAFGTQD 160

BLAST of Cla97C02G033670 vs. NCBI nr
Match: XP_022989019.1 (uncharacterized protein LOC111486209 [Cucurbita maxima])

HSP 1 Score: 147.1 bits (370), Expect = 3.8e-32
Identity = 78/117 (66.67%), Postives = 87/117 (74.36%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPH 60
           MART  ++QANAL  RK+KQL+RQFSS+   S      H K +ETETEP  YNSS WVPH
Sbjct: 1   MART--SVQANALLFRKVKQLRRQFSSLANSS------HNK-EETETEPLSYNSSTWVPH 60

Query: 61  PRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLRPRFAIVFG 118
           PRTGIYFPQGHEWVMKDVPENAASFS + WFRD D +D+LNPD   S  PR A V G
Sbjct: 61  PRTGIYFPQGHEWVMKDVPENAASFSPVFWFRDFDGVDDLNPDTHPSPGPRLAAVLG 108

BLAST of Cla97C02G033670 vs. TrEMBL
Match: tr|A0A1S3C0N8|A0A1S3C0N8_CUCME (uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.5e-41
Identity = 83/109 (76.15%), Postives = 97/109 (88.99%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPH 60
           M+RT + +QAN LFLRKMKQLKRQF S+VI+STSQQ  ++K+DETET+  PYNSS WVPH
Sbjct: 1   MSRTRIPLQANPLFLRKMKQLKRQFRSLVIDSTSQQVLNKKDDETETKSLPYNSSTWVPH 60

Query: 61  PRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDISLR 110
           PRTGIYFPQGHEWVMKD+PENAASFSRLCWFRDSDD+D+LN +N+ S R
Sbjct: 61  PRTGIYFPQGHEWVMKDIPENAASFSRLCWFRDSDDVDDLNHENNTSSR 109

BLAST of Cla97C02G033670 vs. TrEMBL
Match: tr|A0A0A0K7S0|A0A0A0K7S0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.2e-40
Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 0

Query: 6   MAMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGI 65
           M +QAN LFLRKMKQLK QF  +VI+STSQQA ++K+DETETE  PYNSS WVPHPRTGI
Sbjct: 1   MPLQANPLFLRKMKQLKWQFRGLVIDSTSQQALNKKDDETETESLPYNSSTWVPHPRTGI 60

Query: 66  YFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPDNDIS 108
           YFPQGHEWVMKD+PENAASF RLCWFRDSDD+D+LNPD D S
Sbjct: 61  YFPQGHEWVMKDIPENAASFPRLCWFRDSDDVDDLNPDKDTS 102

BLAST of Cla97C02G033670 vs. TrEMBL
Match: tr|A0A2N9J6D4|A0A2N9J6D4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60858 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-12
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 0

Query: 13  LFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIYFPQGHE 72
           L LR+ K+++R FS +     S      K+ +  T  +  +SS WVPHPRTGIYFPQGHE
Sbjct: 7   LLLREAKRVERHFSKLAEAHRS-----VKSKKAITGGKIDDSSCWVPHPRTGIYFPQGHE 66

Query: 73  WVMKDVPENAASFSRLCWFRDSDDID----NLNPDNDI 107
           WV+ DV E AASF++  W R+ DD++    N+NP + +
Sbjct: 67  WVIDDVREGAASFNQTYWLREVDDVEKPDPNINPPDHL 99

BLAST of Cla97C02G033670 vs. TrEMBL
Match: tr|B9GHV7|B9GHV7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G296900v3 PE=4 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 3.7e-12
Identity = 40/97 (41.24%), Postives = 54/97 (55.67%), Query Frame = 0

Query: 7   AMQANALFLRKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGIY 66
           A+ +NA  L   ++  R          + Q P +  +  +         +WVPHPRTGIY
Sbjct: 4   AVLSNAKMLVSCRETSRPLQCHFSSPPAVQQPEKSGNSVKCS----KMGDWVPHPRTGIY 63

Query: 67  FPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPD 104
           FP+GHEWVM DVPENAASFS+  W R+ D ++   PD
Sbjct: 64  FPKGHEWVMDDVPENAASFSQTYWLRNVDGVEKPGPD 96

BLAST of Cla97C02G033670 vs. TrEMBL
Match: tr|A0A0L9U0M8|A0A0L9U0M8_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g238200 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-11
Identity = 40/93 (43.01%), Postives = 62/93 (66.67%), Query Frame = 0

Query: 9  QANALFL---RKMKQLKRQFSSVVIESTSQQAPHQKNDETETEPQPYNSSNWVPHPRTGI 68
          ++N L L   ++ K  + +FS     ST++ +     + ++T+ +  +SS WVPHPRTGI
Sbjct: 8  KSNLLLLGGAKRAKSGRNKFSGTAQASTAESSA----EVSKTDRRIEDSSWWVPHPRTGI 67

Query: 69 YFPQGHEWVMKDVPENAASFSRLCWFRDSDDID 99
          YFP+GHEWVM+DVPE+AA  ++  WFR+ D +D
Sbjct: 68 YFPKGHEWVMEDVPEDAARLNQTFWFRNVDGVD 96

BLAST of Cla97C02G033670 vs. TAIR10
Match: AT3G19550.1 (unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 5.8e-11
Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 0

Query: 1   MARTCMAMQANALFLRKMKQLKRQ--FSSVVIESTSQQAPHQKNDETETEPQPYNSSNWV 60
           M RT +A +A  L LR  KQ + +   SS   +S      + ++             +WV
Sbjct: 1   MGRTGIA-KAPKLLLRSWKQFQGRAGISSKAAKSNPMIVDYFEDISDHNLKFSGEEESWV 60

Query: 61  PHPRTGIYFPQGHEWVMKDVPENAASFSRLCWFRDSDDIDNLNPD 104
           PHPRTGI+FP G E VM+DVP  AASF    W R+ D +D  +PD
Sbjct: 61  PHPRTGIFFPPGQESVMEDVPNGAASFDMTFWLRNVDGVDKPDPD 104

BLAST of Cla97C02G033670 vs. TAIR10
Match: AT1G73120.1 (unknown protein)

HSP 1 Score: 41.2 bits (95), Expect = 5.3e-04
Identity = 27/83 (32.53%), Postives = 42/83 (50.60%), Query Frame = 0

Query: 7  AMQANALFLRKMKQL---KRQFSSVVIESTSQQAPHQKNDETETEPQPYN-------SSN 66
          A   N +F++ M +    K+  S  ++  T +       +E +T    Y        +S+
Sbjct: 11 AQTMNTMFVKPMLRKSIHKKSASHDIVRDTVKTEGSSSGEEVKTMRGFYGAGETSSPASS 70

Query: 67 WVPHPRTGIYFPQGHEWVMKDVP 80
          WVPH  TGIY+P+G E VM+DVP
Sbjct: 71 WVPHEGTGIYYPKGQEKVMQDVP 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011658881.17.6e-4178.50PREDICTED: uncharacterized protein LOC105436102 [Cucumis sativus][more]
XP_008455025.11.3e-4076.15PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo][more]
KGN43861.11.1e-3979.41hypothetical protein Csa_7G071500 [Cucumis sativus][more]
XP_022148740.11.0e-3768.42uncharacterized protein LOC111017332 [Momordica charantia][more]
XP_022989019.13.8e-3266.67uncharacterized protein LOC111486209 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
tr|A0A1S3C0N8|A0A1S3C0N8_CUCME8.5e-4176.15uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=... [more]
tr|A0A0A0K7S0|A0A0A0K7S0_CUCSA7.2e-4079.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1[more]
tr|A0A2N9J6D4|A0A2N9J6D4_FAGSY1.7e-1244.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60858 PE=4 SV=1[more]
tr|B9GHV7|B9GHV7_POPTR3.7e-1241.24Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G296900v3 PE=... [more]
tr|A0A0L9U0M8|A0A0L9U0M8_PHAAN1.1e-1143.01Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g238200 PE... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT3G19550.15.8e-1139.05unknown protein[more]
AT1G73120.15.3e-0432.53unknown protein[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
Vocabulary: INTERPRO
TermDefinition
IPR004926LEA_3
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G033670.1Cla97C02G033670.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004926Late embryogenesis abundant protein, LEA_3 subgroupPFAMPF03242LEA_3coord: 1..71
e-value: 5.1E-6
score: 27.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..59
NoneNo IPR availablePANTHERPTHR35109:SF1SUBFAMILY NOT NAMEDcoord: 1..104
NoneNo IPR availablePANTHERPTHR35109FAMILY NOT NAMEDcoord: 1..104

The following gene(s) are paralogous to this gene:

None