Cucsa.219260 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAATTGAAATGGCAGTTTCGGGGTCTTGTAATTGATTCCACAAGCCAACAAGCCCTAAATAAAAAAGATGATGAGACAGAAACCGAGTCATTGCCCTATAACTCATCGACTTGGGTGCCTCATCCTCGCACTGGAATTtACTTTCCTCAAGGCCATGAGTGGGTCATGAAAGACATCCCTGAAAATGCAGCTTCCTTCCCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTTGATGACTTGAACCCTGATAAGGATACCTCTTCGACGTCTTGA ATGAAGCAATTGAAATGGCAGTTTCGGGGTCTTGTAATTGATTCCACAAGCCAACAAGCCCTAAATAAAAAAGATGATGAGACAGAAACCGAGTCATTGCCCTATAACTCATCGACTTGGGTGCCTCATCCTCGCACTGGAATTTACTTTCCTCAAGGCCATGAGTGGGTCATGAAAGACATCCCTGAAAATGCAGCTTCCTTCCCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTTGATGACTTGAACCCTGATAAGGATACCTCTTCGACGTCTTGA ATGAAGCAATTGAAATGGCAGTTTCGGGGTCTTGTAATTGATTCCACAAGCCAACAAGCCCTAAATAAAAAAGATGATGAGACAGAAACCGAGTCATTGCCCTATAACTCATCGACTTGGGTGCCTCATCCTCGCACTGGAATTtACTTTCCTCAAGGCCATGAGTGGGTCATGAAAGACATCCCTGAAAATGCAGCTTCCTTCCCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTTGATGACTTGAACCCTGATAAGGATACCTCTTCGACGTCTTGA MKQLKWQFRGLVIDSTSQQALNKKDDETETESLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFPRLCWFRDSDDVDDLNPDKDTSSTS*
BLAST of Cucsa.219260 vs. TrEMBL
Match: A0A0A0K7S0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071500 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 2.8e-49 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.219260 vs. TrEMBL
Match: I3SYX4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-12 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 1
BLAST of Cucsa.219260 vs. TrEMBL
Match: B9GHV7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s30410g PE=4 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 3.5e-12 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 1
BLAST of Cucsa.219260 vs. TrEMBL
Match: A0A103XM77_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_004619 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 6.0e-12 Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 1
BLAST of Cucsa.219260 vs. TrEMBL
Match: M0T9W6_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 6.0e-12 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 1
BLAST of Cucsa.219260 vs. TAIR10
Match: AT3G19550.1 (AT3G19550.1 unknown protein) HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11 Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 1
BLAST of Cucsa.219260 vs. NCBI nr
Match: gi|778724901|ref|XP_011658881.1| (PREDICTED: uncharacterized protein LOC105436102 [Cucumis sativus]) HSP 1 Score: 202.2 bits (513), Expect = 4.0e-49 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.219260 vs. NCBI nr
Match: gi|700188628|gb|KGN43861.1| (hypothetical protein Csa_7G071500 [Cucumis sativus]) HSP 1 Score: 202.2 bits (513), Expect = 4.0e-49 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.219260 vs. NCBI nr
Match: gi|659110055|ref|XP_008455025.1| (PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo]) HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41 Identity = 83/93 (89.25%), Postives = 86/93 (92.47%), Query Frame = 1
BLAST of Cucsa.219260 vs. NCBI nr
Match: gi|388514809|gb|AFK45466.1| (unknown [Lotus japonicus]) HSP 1 Score: 80.1 bits (196), Expect = 2.3e-12 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 1
BLAST of Cucsa.219260 vs. NCBI nr
Match: gi|566151837|ref|XP_002300257.2| (hypothetical protein POPTR_0001s30410g [Populus trichocarpa]) HSP 1 Score: 79.0 bits (193), Expect = 5.1e-12 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |