CsaV3_7G007950 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGACTTTTTTCTTTGCTCCTTTTCATAATTTTCCTTCAAAATTATTTGGTTGATTATAATTACATGGGAAGAACTCGTATGCCTCTGCAAGCAAATCCACTCTTTCTTAGGTAAATTCATCTTTCCCCTTTTTCATGGTTTGATTCCCATATTCTTAAAAGTCCGTTTGAATTGACTTCCTAATTGTTTAAACATGTCCTTTGTTATGTTTAAACATGCTTGTGTTTGTATATGATATTAGTTAAAATAGATTCGATCCATATATATCGTCACTATATTTGGTGTCCAAACATAGATGAGACTATAATAACGTACTCCATTGACTTCTAGTTTGTGTCCCCAACGATCTATCAAACATCGTCCACTGTCGTAAAGTTGTGGAAAGAAAAAGTACTCTATGAGAAAGTGGTTGGAAAAAGAAGGTGGATGAGAAAGTTCAACTTTTCTTCCCCTCTTTGCTGCTGCTTTTTCAAACACAGTTCAGTTTATGATTTCATTTCACCATTTCAAGAATGATTAGGTTATTTTTTATTTGACTCATAGTGCTTTTGAGGATTACTAAAAGGGAATTTTTTGTTAGGATGAAAGTTTAGTTTCCACTCAAAATTGATTTTAAGAGTTGAAAATAGTGTTTTATGAAAAAGTATTGTGTGAGGTTTCAGCTTATTAAGTGCTTCACAAATATGTAGAGGCATTTATCAATTTAAATTAAATTAAATTAATTAGCATTCAATTAATTTGACTATATGACAGGAAAATGAAGCAATTGAAATGGCAATTTCGGGGTCTTGTAATTGATTCCACAAGCCAACAAGCCCTAAATAAAAAAGATGATGAGACAGAAACCGAGTCATTGCCCTATAACTCATCGACTTGGGTGCCTCATCCTCGCACTGGAATTTACTTTCCTCAAGGCCATGAGTGGGTCATGAAAGACATCCCTGAAAATGCAGCTTCCTTCCCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTTGATGACTTGAACCCTGATAAGGATACCTCTTCGACGTCTTGATTTGCCTCTATTTTTAGGGGTCGAGATTGAGCCTTCTTAGGAAAGAAGGTTGTCAATGGGCCAATGAAGAATGTGTTAATGGCTTGACAGTGTATTGCTTGTGAGCTTTTGTTGACAAGAGAGACCCAAAGTGACATTAAAATAATGTAAATTAGTTTATACATATAGGTAAAATATCAAATAATGAAACGAATAAATAATAATTCGAAAGTTTAAACATCTATAAACCCTAAACACTATGGACATTTACTAATTTTGTAATTAAAATTGGTGTAAAGATAATCAAGTTTTATTAACAAATCAATACGTCAATTTGCATTTGTTTTTTATTGTAATGATCTATCTTACCAAATCTACGGTTTTTTCTACCAAATCTCCACTAATAAAAAATTCCCTTCCAATTTGCATCATATTCTTCCAATCAACAAAAAAATCTTTTCAATCATCAATTTGTTTTGCTTTGGTTTCTT ATGGGAAGAACTCGTATGCCTCTGCAAGCAAATCCACTCTTTCTTAGGAAAATGAAGCAATTGAAATGGCAATTTCGGGGTCTTGTAATTGATTCCACAAGCCAACAAGCCCTAAATAAAAAAGATGATGAGACAGAAACCGAGTCATTGCCCTATAACTCATCGACTTGGGTGCCTCATCCTCGCACTGGAATTTACTTTCCTCAAGGCCATGAGTGGGTCATGAAAGACATCCCTGAAAATGCAGCTTCCTTCCCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTTGATGACTTGAACCCTGATAAGGATACCTCTTCGACGTCTTGA ATGGGAAGAACTCGTATGCCTCTGCAAGCAAATCCACTCTTTCTTAGGAAAATGAAGCAATTGAAATGGCAATTTCGGGGTCTTGTAATTGATTCCACAAGCCAACAAGCCCTAAATAAAAAAGATGATGAGACAGAAACCGAGTCATTGCCCTATAACTCATCGACTTGGGTGCCTCATCCTCGCACTGGAATTTACTTTCCTCAAGGCCATGAGTGGGTCATGAAAGACATCCCTGAAAATGCAGCTTCCTTCCCTCGACTTTGTTGGTTTCGGGATTCTGATGATGTTGATGACTTGAACCCTGATAAGGATACCTCTTCGACGTCTTGA MGRTRMPLQANPLFLRKMKQLKWQFRGLVIDSTSQQALNKKDDETETESLPYNSSTWVPHPRTGIYFPQGHEWVMKDIPENAASFPRLCWFRDSDDVDDLNPDKDTSSTS
BLAST of CsaV3_7G007950 vs. NCBI nr
Match: XP_011658881.1 (PREDICTED: uncharacterized protein LOC105436102 [Cucumis sativus]) HSP 1 Score: 234.6 bits (597), Expect = 1.7e-58 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. NCBI nr
Match: KGN43861.1 (hypothetical protein Csa_7G071500 [Cucumis sativus]) HSP 1 Score: 224.9 bits (572), Expect = 1.3e-55 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. NCBI nr
Match: XP_008455025.1 (PREDICTED: uncharacterized protein LOC103495298 [Cucumis melo]) HSP 1 Score: 205.7 bits (522), Expect = 8.2e-50 Identity = 98/110 (89.09%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. NCBI nr
Match: XP_022148740.1 (uncharacterized protein LOC111017332 [Momordica charantia]) HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30 Identity = 64/100 (64.00%), Postives = 81/100 (81.00%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. NCBI nr
Match: XP_022989019.1 (uncharacterized protein LOC111486209 [Cucurbita maxima]) HSP 1 Score: 132.9 bits (333), Expect = 6.8e-28 Identity = 66/103 (64.08%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. TAIR10
Match: AT3G19550.1 (unknown protein) HSP 1 Score: 67.4 bits (163), Expect = 6.3e-12 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. TAIR10
Match: AT1G73120.1 (unknown protein) HSP 1 Score: 43.9 bits (102), Expect = 7.5e-05 Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. TrEMBL
Match: tr|A0A0A0K7S0|A0A0A0K7S0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071500 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 8.7e-56 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. TrEMBL
Match: tr|A0A1S3C0N8|A0A1S3C0N8_CUCME (uncharacterized protein LOC103495298 OS=Cucumis melo OX=3656 GN=LOC103495298 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 5.4e-50 Identity = 98/110 (89.09%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. TrEMBL
Match: tr|I3SYX4|I3SYX4_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.0e-12 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. TrEMBL
Match: tr|A0A200R2X4|A0A200R2X4_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_9047g17 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 4.5e-12 Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 0
BLAST of CsaV3_7G007950 vs. TrEMBL
Match: tr|B9GHV7|B9GHV7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G296900v3 PE=4 SV=2) HSP 1 Score: 79.3 bits (194), Expect = 5.9e-12 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |