CmaCh10G004940 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGGGTTTCTTTCCGGTGGGCCTAACTAACCCGACCCTGGTATTTCACGGCACCTTCGCGCCTCCTTCCGCGCACTTTCCTCCTCCTTCCAGTGCCGATGGAGTCAATGCAATCAAACTGTACTTAATCACTTCTCTCTCCGCCTTCTCAGCCAGAAAAGCCCTAGATCCGTGCAGAAATTTCAACTTTCAAGGTTTCCAAAGTTCCTCCAATGGCCGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACATCGCCGCTCAAGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCTCCTCGCTTCAAATCCATCTCTGGTTCGTAAATCGCATCTCGTTCTGTCGATGAAATCATAGTGTATTGATTCAATTGATTCGATCTTAACTGATAATTTTGCAGGAAAGAAGCCTGTTAATCGAGGCGGATGAAGACGATAAACTGGTTGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGAACGCAGATGAAATCCAGGTACTGAAAACGATAGCAACATAGATCGTTTACCATTTCGTTTGATTTAATCTCAATCATAAAGATCGATTACTGGTTTTTCCATGGTTCGAAAGAATGAAATATTCATGATCTGATGCAGAAAGTTCAATTGGACAAAGTTCAATTGGACGGGCGTGGAGCAAGACAAGTGTGGCCAGTGCTGGTGAAGAAGACGACTTCATTTCAGTGGATCTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGGTGCTTTGTTTTTTCTACCCCGATGCCGGTTCGGATTATGTATATTTCAAATTACATCTCATAAACACCGCTTAAAATTCATAAAAACTCAAACTGTTCATGTTTGGATTCATTAATTATTTATGAATCTATTAATTATCTATTTCTAACATCAATAATCGCTTTCGATCAATTAGCTATATTACAAATTGAAATTTGTGCTAGTTTTTACCAGATTCAAAGACAAGAATACTAAGCCCTACAGATATCTTATAACTATACCATATTTGTAATTCTCTTTCAACATTTTTGCCGAAAAAAATGACTACGTAAGGTTGAACACTTACTACCAAAAAATTAAGAGAGGTTCTACCATAAGTATTAACAAACCACAAGGAATCATACCGTAATGTATACCTATATATTTGTCTTTCACACCGTTCTTCATTCCTATAAACATCGAAGATCGAAGATCAATATGGCCACTCCAAACGATAATTATTAATCAAAATAGTTGAGAAATTAAAAGGAAAAAAAAGAGTCCTAATGTCTAATTTTCACAAGAATGAACATAAAATAGCTTCCTAGACAATGAATAAACATATAATTTTTATTATATATTCATTTTATAAATTAGCTGATGATTTAAAATGTTTAGAACTTAATAAAATGAAACATAATAATAATAATTAATTAGAAAATGCGTCAGATTTTGTCGTAGGATCACAAAAGCTACTTTAACTAAATTATATATATATATATATATATATAAAAGATATTATTTAAATTAATTAACTTATTAGTATAACTCGACTAATATAGTAAAAATTTAGAATTGGGAAAATTAATTTCGAACAAAATTACTAATTCATAAATGAAAATTGAATAAATGTAAAATTTAAATCTTTATTATTGAGATGATTTGAGGTGGAAAATCTTTATTTAATTTTATTATTGGGAAAAAATGTAAGATTTAAACCCTTGCAAACAAAAACCTCCCTTTTAACATAATTTTCAAATTGCTCCCTCAAACCATTCACAAATTTTCCAGA ATGGATGGGTTTCTTTCCGGTGGGCCTAACTAACCCGACCCTGGTATTTCACGGCACCTTCGCGCCTCCTTCCGCGCACTTTCCTCCTCCTTCCAGTGCCGATGGAGTCAATGCAATCAAACTGTACTTAATCACTTCTCTCTCCGCCTTCTCAGCCAGAAAAGCCCTAGATCCGTGCAGAAATTTCAACTTTCAAGGTTTCCAAAGTTCCTCCAATGGCCGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACATCGCCGCTCAAGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCTCCTCGCTTCAAATCCATCTCTGGAAAGAAGCCTGTTAATCGAGGCGGATGAAGACGATAAACTGGTTGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGAACGCAGATGAAATCCAGAAAGTTCAATTGGACAAAGTTCAATTGGACGGGCGTGGAGCAAGACAAGTGTGGCCAGTGCTGA ATGGCCGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACATCGCCGCTCAAGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCTCCTCGCTTCAAATCCATCTCTGGAAAGAAGCCTGTTAATCGAGGCGGATGAAGACGATAAACTGGTTGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGAACGCAGATGAAATCCAGAAAGTTCAATTGGACAAAGTTCAATTGGACGGGCGTGGAGCAAGACAAGTGTGGCCAGTGCTGA MAGMLPGVECARRRRCHQNKVWSDSPHIAAQALTRRSVLCLYTSNHETLLASNPSLERSLLIEADEDDKLVGSAREAKRRLDERLRTQMKSRKFNWTKFNWTGVEQDKCGQC
BLAST of CmaCh10G004940 vs. TrEMBL
Match: A0A0A0LWJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G265120 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.6e-40 Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 1
BLAST of CmaCh10G004940 vs. TrEMBL
Match: A0A0D2PA85_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G114100 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.4e-23 Identity = 68/148 (45.95%), Postives = 83/148 (56.08%), Query Frame = 1
BLAST of CmaCh10G004940 vs. TrEMBL
Match: A0A0B0NAG0_GOSAR (Zinc/RING finger 3 OS=Gossypium arboreum GN=F383_35205 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.4e-22 Identity = 67/148 (45.27%), Postives = 81/148 (54.73%), Query Frame = 1
BLAST of CmaCh10G004940 vs. TrEMBL
Match: F6HCI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00780 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.5e-22 Identity = 68/149 (45.64%), Postives = 82/149 (55.03%), Query Frame = 1
BLAST of CmaCh10G004940 vs. TrEMBL
Match: A5ASH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034074 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.5e-22 Identity = 68/149 (45.64%), Postives = 82/149 (55.03%), Query Frame = 1
BLAST of CmaCh10G004940 vs. TAIR10
Match: AT2G15580.1 (AT2G15580.1 RING/U-box superfamily protein) HSP 1 Score: 72.0 bits (175), Expect = 2.6e-13 Identity = 49/109 (44.95%), Postives = 66/109 (60.55%), Query Frame = 1
BLAST of CmaCh10G004940 vs. NCBI nr
Match: gi|659086379|ref|XP_008443904.1| (PREDICTED: uncharacterized protein LOC103487385 isoform X1 [Cucumis melo]) HSP 1 Score: 177.2 bits (448), Expect = 1.6e-41 Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 1
BLAST of CmaCh10G004940 vs. NCBI nr
Match: gi|449457937|ref|XP_004146704.1| (PREDICTED: uncharacterized protein LOC101215379 [Cucumis sativus]) HSP 1 Score: 173.3 bits (438), Expect = 2.4e-40 Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 1
BLAST of CmaCh10G004940 vs. NCBI nr
Match: gi|659086381|ref|XP_008443905.1| (PREDICTED: uncharacterized protein LOC103487385 isoform X2 [Cucumis melo]) HSP 1 Score: 172.6 bits (436), Expect = 4.0e-40 Identity = 89/122 (72.95%), Postives = 97/122 (79.51%), Query Frame = 1
BLAST of CmaCh10G004940 vs. NCBI nr
Match: gi|823149208|ref|XP_012474474.1| (PREDICTED: RING finger protein 165-like [Gossypium raimondii]) HSP 1 Score: 116.3 bits (290), Expect = 3.4e-23 Identity = 68/148 (45.95%), Postives = 83/148 (56.08%), Query Frame = 1
BLAST of CmaCh10G004940 vs. NCBI nr
Match: gi|728828628|gb|KHG08071.1| (Zinc/RING finger 3 [Gossypium arboreum]) HSP 1 Score: 112.5 bits (280), Expect = 4.9e-22 Identity = 67/148 (45.27%), Postives = 81/148 (54.73%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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