Carg09968 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTTCCAGTGCCGATGGAGTCAATGCAATAAATCTGTACTTAATCACTTCTCTCTCCGCCTGCTCAGCCAGAAAAGCCCTAGATCCGTGCAGAAATTTCAACTTTCAAGGTTTCCAAAGTTTGTCCAATGGCTGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACATCGCCGCTCAGGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCACCTCGCTTCAAATCCATCTCTGGTTCGTAAATCGCATCTCGTTCTGTCGATGAAATCGGAGTGTATTGATTTAATTGATTCGATTTTAACTGTTAATTTTGCAGGAAAGAAGCCTGTTAATTGAGGCGGATGAAGACGATAAACTGGATGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGAACGCAGAGGAAATCCAGGTACTGAAAACGATAGCAACATAGATCGATTACCATTTCGTTTGATTTAATCTCAATCATAAAGATCGATTACTGGTTTTCCATGGTTCGAAATAATGAAATATTCACGATCTGATGCAGAAAGTTCAATTGGACAAAGTTGAATTGGACAAAGTTGAATTGGACAGGCGTGGAGCAAGACAAGTGCCGCCAGTGCTGGTGAAGAAGACGACTTCATTTCAGTGGATCTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGGTGCTTTGTTTTTTCTACACCGATGCCGGTTCGGATTATGTATATTTCAAATTACATCTCATAAACACGGCTTAAAATTCATAAAAACTCAAACTGTTCATGTTTGGATTCATTAATTATTTATGAATCTATCAATTGTACCTTGGATGATGAAATGGATGATGAAACCCGCTAATTTAGAGAATGATCTCAAAGAATACTCTCTCAATTGGTGTGAGACTTTTTGGGGAACCCAAAGCAAAGTCATGAAAGCTTATGCTCGCTTGGACAATATCATACCATTGTGGAGAGTCGTGTTTATCTAACATGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATGACAATATCATACCATTGTGGAG TCCTTCCAGTGCCGATGGAGTCAATGCAATAAATCTGTACTTAATCACTTCTCTCTCCGCCTGCTCAGCCAGAAAAGCCCTAGATCCGTGCAGAAATTTCAACTTTCAAGGTTTCCAAAGTTTGTCCAATGGCTGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACATCGCCGCTCAGGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCACCTCGCTTCAAATCCATCTCTGGAAAGAAGCCTGTTAATTGAGGCGGATGAAGACGATAAACTGGATGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGAACGCAGAGGAAATCCAGAAAGTTCAATTGGACAAAGTTGAATTGGACAAAGTTGAATTGGACAGGCGTGGAGCAAGACAAGTGCCGCCAGTGCTGGTGAAGAAGACGACTTCATTTCAGTGGATCTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGGTGCTTTGTTTTTTCTACACCGATGCCGGTTCGGATTATGTATATTTCAAATTACATCTCATAAACACGGCTTAAAATTCATAAAAACTCAAACTGTTCATGTTTGGATTCATTAATTATTTATGAATCTATCAATTGTACCTTGGATGATGAAATGGATGATGAAACCCGCTAATTTAGAGAATGATCTCAAAGAATACTCTCTCAATTGGTGTGAGACTTTTTGGGGAACCCAAAGCAAAGTCATGAAAGCTTATGCTCGCTTGGACAATATCATACCATTGTGGAGAGTCGTGTTTATCTAACATGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACATGACAATATCATACCATTGTGGAG ATGGCTGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACATCGCCGCTCAGGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCACCTCGCTTCAAATCCATCTCTGGAAAGAAGCCTGTTAATTGAGGCGGATGAAGACGATAAACTGGATGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGAACGCAGAGGAAATCCAGAAAGTTCAATTGGACAAAGTTGAATTGGACAAAGTTGAATTGGACAGGCGTGGAGCAAGACAAGTGCCGCCAGTGCTGGTGA MAGMLPGVECARRRRCHQNKVWSDSPHIAAQALTRRSVLCLYTSNHETHLASNPSLERSLLIEADEDDKLDGSAREAKRRLDERLRTQRKSRKFNWTKLNWTKLNWTGVEQDKCRQCW
BLAST of Carg09968 vs. NCBI nr
Match: XP_022921934.1 (uncharacterized protein LOC111430042 isoform X1 [Cucurbita moschata]) HSP 1 Score: 189.5 bits (480), Expect = 6.5e-45 Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0
BLAST of Carg09968 vs. NCBI nr
Match: XP_022921935.1 (uncharacterized protein LOC111430042 isoform X2 [Cucurbita moschata]) HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43 Identity = 103/118 (87.29%), Postives = 103/118 (87.29%), Query Frame = 0
BLAST of Carg09968 vs. NCBI nr
Match: XP_023515554.1 (uncharacterized protein LOC111779678 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.5 bits (467), Expect = 2.1e-43 Identity = 95/118 (80.51%), Postives = 97/118 (82.20%), Query Frame = 0
BLAST of Carg09968 vs. NCBI nr
Match: XP_022988483.1 (uncharacterized protein LOC111485711 isoform X1 [Cucurbita maxima]) HSP 1 Score: 179.5 bits (454), Expect = 6.7e-42 Identity = 100/118 (84.75%), Postives = 100/118 (84.75%), Query Frame = 0
BLAST of Carg09968 vs. NCBI nr
Match: XP_022988484.1 (uncharacterized protein LOC111485711 isoform X2 [Cucurbita maxima]) HSP 1 Score: 171.4 bits (433), Expect = 1.8e-39 Identity = 87/90 (96.67%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Carg09968 vs. TAIR10
Match: AT2G15580.1 (RING/U-box superfamily protein) HSP 1 Score: 77.8 bits (190), Expect = 5.0e-15 Identity = 48/95 (50.53%), Postives = 62/95 (65.26%), Query Frame = 0
BLAST of Carg09968 vs. TrEMBL
Match: tr|A0A1S3B9W3|A0A1S3B9W3_CUCME (uncharacterized protein LOC103487385 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487385 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33 Identity = 80/123 (65.04%), Postives = 88/123 (71.54%), Query Frame = 0
BLAST of Carg09968 vs. TrEMBL
Match: tr|A0A1S3B9Y1|A0A1S3B9Y1_CUCME (uncharacterized protein LOC103487385 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487385 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 4.2e-32 Identity = 80/123 (65.04%), Postives = 87/123 (70.73%), Query Frame = 0
BLAST of Carg09968 vs. TrEMBL
Match: tr|A0A0A0LWJ8|A0A0A0LWJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265120 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 3.5e-31 Identity = 79/122 (64.75%), Postives = 87/122 (71.31%), Query Frame = 0
BLAST of Carg09968 vs. TrEMBL
Match: tr|A5ASH9|A5ASH9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034074 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22 Identity = 62/91 (68.13%), Postives = 70/91 (76.92%), Query Frame = 0
BLAST of Carg09968 vs. TrEMBL
Match: tr|F6HCI8|F6HCI8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0118g00780 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22 Identity = 62/91 (68.13%), Postives = 70/91 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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