CmoCh10G005270 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAATTTCATGGCACCTTCGCGCCTCCTTCCGCGCACTTTCCTCCTCCTTCCAGTGCCGATGGAGTCAATGCAATCAATCTGTACTTAATCACTTCTCTCTCCGCCTCCTCAGCCAGAAAAGCCCTAGATCCGTGCAGAAATTTCAACTTTCAAGGTTTCCAAAGTTTCTCCAATGGCCGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACATCGCCGCTCAGGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCTCCTCGCTTCAAATCCATCTCTGGTTCGTAAATCGCATCTCGTTCTGTCGATGAAATCCGAGTGTATTGATTCAATTGATTCGATTTTAACTGATAATTTTGCAGGAAAGAAGCCTGTTAATCGAGGCGGATGAAGACGATAAACTGGATGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGAACGCAGAGGAAATCCAGGTACTGAAAACGATAACAACACAGATCGATTAACACTTCGTTTGATTTAATCTCAATCATAAAGATCGATTCCTGGTTTTCCATGGTTCGAAATAATGAAATATTCACGATCTGATGCAGAAAGTTCAATTGGACAAAGTTGAATTGGACAAAGTTGAATTGGACAGGCGTGGAGCAAGACAAGTGCGGCCAGTGCTGGTGAAGAACACGACTTCATTTCAGTGGATCTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGGTGCTTTGTTTTTTCTACACCGATGCCGGTTCGGATTATGTATATTTCAAATTACATCTCATAAACACGGCTTAAAATTCATAAAAACTCAAACTGTTCATGTTTGGATTCATTAATTATTTATGAATCTATCAATTGTATGTTGGATGATGAAATGGATGATGAAACCGCTAATTTAGAGAATGATTTCAAAGAATACTCTCTCAATTGGTGTGAGGTTTTTTGGGTTGGAATACTCTCTATTGGTGTGAGACTTTTTTGGGGAGCCTAAAGCAAAGTCATGAGAGCTTATACTCGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTTATCTAACACGATGTCGTACCATTGTGGAGAGTCGTGTTCATCTAACATAACAATATCATAC GTAATTTCATGGCACCTTCGCGCCTCCTTCCGCGCACTTTCCTCCTCCTTCCAGTGCCGATGGAGTCAATGCAATCAATCTGTACTTAATCACTTCTCTCTCCGCCTCCTCAGCCAGAAAAGCCCTAGATCCGTGCAGAAATTTCAACTTTCAAGGTTTCCAAAGTTTCTCCAATGGCCGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACATCGCCGCTCAGGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCTCCTCGCTTCAAATCCATCTCTGGAAAGAAGCCTGTTAATCGAGGCGGATGAAGACGATAAACTGGATGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGAACGCAGAGGAAATCCAGAAAGTTCAATTGGACAAAGTTGAATTGGACAAAGTTGAATTGGACAGGCGTGGAGCAAGACAAGTGCGGCCAGTGCTGGTGAAGAACACGACTTCATTTCAGTGGATCTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGGTGCTTTGTTTTTTCTACACCGATGCCGGTTCGGATTATGTATATTTCAAATTACATCTCATAAACACGGCTTAAAATTCATAAAAACTCAAACTGTTCATGTTTGGATTCATTAATTATTTATGAATCTATCAATTGTATGTTGGATGATGAAATGGATGATGAAACCGCTAATTTAGAGAATGATTTCAAAGAATACTCTCTCAATTGGTGTGAGGTTTTTTGGGTTGGAATACTCTCTATTGGTGTGAGACTTTTTTGGGGAGCCTAAAGCAAAGTCATGAGAGCTTATACTCGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTTATCTAACACGATGTCGTACCATTGTGGAGAGTCGTGTTCATCTAACATAACAATATCATAC ATGGCCGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACATCGCCGCTCAGGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCTCCTCGCTTCAAATCCATCTCTGGAAAGAAGCCTGTTAATCGAGGCGGATGAAGACGATAAACTGGATGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGAACGCAGAGGAAATCCAGAAAGTTCAATTGGACAAAGTTGAATTGGACAAAGTTGAATTGGACAGGCGTGGAGCAAGACAAGTGCGGCCAGTGCTGGTGA
BLAST of CmoCh10G005270 vs. TrEMBL
Match: A0A0A0LWJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G265120 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 2.7e-41 Identity = 91/122 (74.59%), Postives = 101/122 (82.79%), Query Frame = 1
BLAST of CmoCh10G005270 vs. TrEMBL
Match: A0A0D2PA85_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G114100 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.5e-23 Identity = 70/148 (47.30%), Postives = 85/148 (57.43%), Query Frame = 1
BLAST of CmoCh10G005270 vs. TrEMBL
Match: A0A0B0NAG0_GOSAR (Zinc/RING finger 3 OS=Gossypium arboreum GN=F383_35205 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.1e-22 Identity = 69/148 (46.62%), Postives = 83/148 (56.08%), Query Frame = 1
BLAST of CmoCh10G005270 vs. TrEMBL
Match: F6HCI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00780 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.6e-22 Identity = 69/149 (46.31%), Postives = 84/149 (56.38%), Query Frame = 1
BLAST of CmoCh10G005270 vs. TrEMBL
Match: A5ASH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034074 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.6e-22 Identity = 69/149 (46.31%), Postives = 84/149 (56.38%), Query Frame = 1
BLAST of CmoCh10G005270 vs. TAIR10
Match: AT2G15580.1 (AT2G15580.1 RING/U-box superfamily protein) HSP 1 Score: 73.2 bits (178), Expect = 1.2e-13 Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 1
BLAST of CmoCh10G005270 vs. NCBI nr
Match: gi|659086379|ref|XP_008443904.1| (PREDICTED: uncharacterized protein LOC103487385 isoform X1 [Cucumis melo]) HSP 1 Score: 183.7 bits (465), Expect = 1.8e-43 Identity = 92/123 (74.80%), Postives = 102/123 (82.93%), Query Frame = 1
BLAST of CmoCh10G005270 vs. NCBI nr
Match: gi|659086381|ref|XP_008443905.1| (PREDICTED: uncharacterized protein LOC103487385 isoform X2 [Cucumis melo]) HSP 1 Score: 179.1 bits (453), Expect = 4.5e-42 Identity = 92/123 (74.80%), Postives = 101/123 (82.11%), Query Frame = 1
BLAST of CmoCh10G005270 vs. NCBI nr
Match: gi|449457937|ref|XP_004146704.1| (PREDICTED: uncharacterized protein LOC101215379 [Cucumis sativus]) HSP 1 Score: 176.0 bits (445), Expect = 3.8e-41 Identity = 91/122 (74.59%), Postives = 101/122 (82.79%), Query Frame = 1
BLAST of CmoCh10G005270 vs. NCBI nr
Match: gi|823149208|ref|XP_012474474.1| (PREDICTED: RING finger protein 165-like [Gossypium raimondii]) HSP 1 Score: 117.1 bits (292), Expect = 2.1e-23 Identity = 70/148 (47.30%), Postives = 85/148 (57.43%), Query Frame = 1
BLAST of CmoCh10G005270 vs. NCBI nr
Match: gi|728828628|gb|KHG08071.1| (Zinc/RING finger 3 [Gossypium arboreum]) HSP 1 Score: 113.2 bits (282), Expect = 3.0e-22 Identity = 69/148 (46.62%), Postives = 83/148 (56.08%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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