Cp4.1LG18g05490 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGGTATTTTTTGAATGGATGGTTTCTTTCCGGTGGGCCTAACCAACCCGACTCTGGTAATTTCATGGCACCTTCGCGCCTCCTTCCGCGCACTTTCCTCCTTGTTCCAGTGCCGATGGAGTCGATGCAATCAAACCGTACTTAATCACTTCTCTCCGCCTTCTCAGCCAGAAAAGCCCTAGATCTGTGTAGAAATTTCAACCTTCAAGGTTTCCAAAGTTTCTCCAATGGCTGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACGTCGCCGCTCAGGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCTCCTCGCTTCGAATCCATCTCTGGTTCGTAAATCGCATCTCGTTCTGTCGATGAAATCAGAGTGTATTGATTCAATTGATTCGATTTTAAATGTTAATTTTGCAGGAAAGAAGCCTGTTAGTCGAGGCGGATGAAGACGATAAACTGGATGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGATGAGCGATTGAGAACGCAGAGGAAATCCAGGTACTGAAAACGATAGCAACACAGATCGATTAACACTTCGTTTGATTTAATCTCAATCATAAAGATCGATGACTGGTTTTTCCATGGTTCGAAAGAATGAAATATTCATGATCTGATGCAGAAAGTTCAATTGGACAAAGTTGAATTGGACAAGCGTGGAGCAAGACAAGTGCGGCCAGTGCTGGTGAAGAAGACGACTTCATTTCAGTGGATCTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGGTGCTTTGTTTTTTCTACACCGATGCCGGTTCGGATTATGTATATTTCAAATTACATCTCAGAAACACCGCTTTAAATTCATACAAACTCAAACTGTTCATGTTTGGATTCATTCATTATTTATGAATCTACCAATTATATATTTCTAACATCAATAATCGCTTTCGATCGATTAACTATATTACAAATTGAAATTTGTGCTAGTTTTTACCAGATTCAAAGACAAGAGTACTAACCCCTACAATTGTAATTCTCTTTCAACATTTTTTCGATCTGTTCAACGCTTCTACCGAAAAATTAAGAGAGGTTCTACCATAAGTATTAACGAATCATATCGTAATGTATACCTATATATTACATAGTTGTCTTTCATACCGTTCTTCATTCCTATAAACATCGAAGATCGAAGATCAATATGGCCACTCGAAA ATTTGGTATTTTTTGAATGGATGGTTTCTTTCCGGTGGGCCTAACCAACCCGACTCTGGTAATTTCATGGCACCTTCGCGCCTCCTTCCGCGCACTTTCCTCCTTGTTCCAGTGCCGATGGAGTCGATGCAATCAAACCGTACTTAATCACTTCTCTCCGCCTTCTCAGCCAGAAAAGCCCTAGATCTGTGTAGAAATTTCAACCTTCAAGGTTTCCAAAGTTTCTCCAATGGCTGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACGTCGCCGCTCAGGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCTCCTCGCTTCGAATCCATCTCTGGAAAGAAGCCTGTTAGTCGAGGCGGATGAAGACGATAAACTGGATGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGATGAGCGATTGAGAACGCAGAGGAAATCCAGAAAGTTCAATTGGACAAAGTTGAATTGGACAAGCGTGGAGCAAGACAAGTGCGGCCAGTGCTGGTGAAGAAGACGACTTCATTTCAGTGGATCTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATGGTGCTTTGTTTTTTCTACACCGATGCCGGTTCGGATTATGTATATTTCAAATTACATCTCAGAAACACCGCTTTAAATTCATACAAACTCAAACTGTTCATGTTTGGATTCATTCATTATTTATGAATCTACCAATTATATATTTCTAACATCAATAATCGCTTTCGATCGATTAACTATATTACAAATTGAAATTTGTGCTAGTTTTTACCAGATTCAAAGACAAGAGTACTAACCCCTACAATTGTAATTCTCTTTCAACATTTTTTCGATCTGTTCAACGCTTCTACCGAAAAATTAAGAGAGGTTCTACCATAAGTATTAACGAATCATATCGTAATGTATACCTATATATTACATAGTTGTCTTTCATACCGTTCTTCATTCCTATAAACATCGAAGATCGAAGATCAATATGGCCACTCGAAA ATGGCTGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGAAGACGATGTCATCAAAACAAAGTATGGTCAGATTCACCGCACGTCGCCGCTCAGGCCTTAACCAGGAGATCTGTTCTCTGCTTGTACACCAGCAACCACGAAACGCTCCTCGCTTCGAATCCATCTCTGGAAAGAAGCCTGTTAGTCGAGGCGGATGAAGACGATAAACTGGATGGAAGTGCGAGAGAGGCGAAGAGGAGATTGGATGAGCGATTGAGAACGCAGAGGAAATCCAGAAAGTTCAATTGGACAAAGTTGAATTGGACAAGCGTGGAGCAAGACAAGTGCGGCCAGTGCTGGTGA MAGMLPGVECARRRRCHQNKVWSDSPHVAAQALTRRSVLCLYTSNHETLLASNPSLERSLLVEADEDDKLDGSAREAKRRLDERLRTQRKSRKFNWTKLNWTSVEQDKCGQCW
BLAST of Cp4.1LG18g05490 vs. TrEMBL
Match: A0A0A0LWJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G265120 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 3.3e-41 Identity = 90/122 (73.77%), Postives = 100/122 (81.97%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. TrEMBL
Match: A0A0D2PA85_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G114100 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-24 Identity = 71/148 (47.97%), Postives = 86/148 (58.11%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. TrEMBL
Match: A0A0B0NAG0_GOSAR (Zinc/RING finger 3 OS=Gossypium arboreum GN=F383_35205 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.1e-23 Identity = 70/148 (47.30%), Postives = 84/148 (56.76%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. TrEMBL
Match: A5ASH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034074 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 5.3e-23 Identity = 71/149 (47.65%), Postives = 85/149 (57.05%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. TrEMBL
Match: F6HCI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00780 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 5.3e-23 Identity = 71/149 (47.65%), Postives = 85/149 (57.05%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. TAIR10
Match: AT2G15580.1 (AT2G15580.1 RING/U-box superfamily protein) HSP 1 Score: 74.3 bits (181), Expect = 5.3e-14 Identity = 53/117 (45.30%), Postives = 71/117 (60.68%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. NCBI nr
Match: gi|659086379|ref|XP_008443904.1| (PREDICTED: uncharacterized protein LOC103487385 isoform X1 [Cucumis melo]) HSP 1 Score: 184.1 bits (466), Expect = 1.3e-43 Identity = 93/123 (75.61%), Postives = 101/123 (82.11%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. NCBI nr
Match: gi|659086381|ref|XP_008443905.1| (PREDICTED: uncharacterized protein LOC103487385 isoform X2 [Cucumis melo]) HSP 1 Score: 179.1 bits (453), Expect = 4.3e-42 Identity = 93/123 (75.61%), Postives = 100/123 (81.30%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. NCBI nr
Match: gi|449457937|ref|XP_004146704.1| (PREDICTED: uncharacterized protein LOC101215379 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 4.8e-41 Identity = 90/122 (73.77%), Postives = 100/122 (81.97%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. NCBI nr
Match: gi|823149208|ref|XP_012474474.1| (PREDICTED: RING finger protein 165-like [Gossypium raimondii]) HSP 1 Score: 119.8 bits (299), Expect = 3.1e-24 Identity = 71/148 (47.97%), Postives = 86/148 (58.11%), Query Frame = 1
BLAST of Cp4.1LG18g05490 vs. NCBI nr
Match: gi|728828628|gb|KHG08071.1| (Zinc/RING finger 3 [Gossypium arboreum]) HSP 1 Score: 115.9 bits (289), Expect = 4.5e-23 Identity = 70/148 (47.30%), Postives = 84/148 (56.76%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |