Cla97C07G144080 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G144080
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	zinc finger CCCH domain-containing protein 54
Location	Cla97Chr07 : 31556136 .. 31556783 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCAAGGGTTTGTTTTCGGCATTAATGACGTGTACGGCCACGAATTCTCCGCCATGTCTCTGCCGGAATTCACTAACAGCCAGTCAACGGAACAAATCGACGACACGGCGGTGTTCAGCTCCGACGAGTTTCGAATGTACTCGTACAAGATCCAACGGTGTCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAACTACACTGCTGTCGCCTGCCCGGCTTTCCGGTCGGGCAGCTGCCCCAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTACTGGCTTCACCCGGCCCGTTACCGGACCCGGGCTTGTAATGCTGGCCGGTTTTGCCAACGGAAAGTTTGTTTTTTCGCTCACTCGCCGGAGGAGCTCCGGCCAGATACCAAACAGAAATTTAATCTTAATGCTCACCGGCTGCGTGTGGCGGTCTCCACCGTTGAATGTCTGCCGGAGGAAAAAATTGACGGCGTTTCGGAAATTCCGGTGAGGGAGAACGGCGGCGGACGGGGAAATCGGAGTTTTGGGTTGGAGGTGTCGGAGTTGGACTCGCCGCATATTGACTGGATATCGGAATTGTTGCAGTAA

mRNA sequence

ATGTTCCAAGGGTTTGTTTTCGGCATTAATGACGTGTACGGCCACGAATTCTCCGCCATGTCTCTGCCGGAATTCACTAACAGCCAGTCAACGGAACAAATCGACGACACGGCGGTGTTCAGCTCCGACGAGTTTCGAATGTACTCGTACAAGATCCAACGGTGTCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAACTACACTGCTGTCGCCTGCCCGGCTTTCCGGTCGGGCAGCTGCCCCAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTACTGGCTTCACCCGGCCCGTTACCGGACCCGGGCTTGTAATGCTGGCCGGTTTTGCCAACGGAAAGTTTGTTTTTTCGCTCACTCGCCGGAGGAGCTCCGGCCAGATACCAAACAGAAATTTAATCTTAATGCTCACCGGCTGCGTGTGGCGGTCTCCACCGTTGAATGTCTGCCGGAGGAAAAAATTGACGGCGTTTCGGAAATTCCGGTGAGGGAGAACGGCGGCGGACGGGGAAATCGGAGTTTTGGGTTGGAGGTGTCGGAGTTGGACTCGCCGCATATTGACTGGATATCGGAATTGTTGCAGTAA

Coding sequence (CDS)

ATGTTCCAAGGGTTTGTTTTCGGCATTAATGACGTGTACGGCCACGAATTCTCCGCCATGTCTCTGCCGGAATTCACTAACAGCCAGTCAACGGAACAAATCGACGACACGGCGGTGTTCAGCTCCGACGAGTTTCGAATGTACTCGTACAAGATCCAACGGTGTCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAACTACACTGCTGTCGCCTGCCCGGCTTTCCGGTCGGGCAGCTGCCCCAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTACTGGCTTCACCCGGCCCGTTACCGGACCCGGGCTTGTAATGCTGGCCGGTTTTGCCAACGGAAAGTTTGTTTTTTCGCTCACTCGCCGGAGGAGCTCCGGCCAGATACCAAACAGAAATTTAATCTTAATGCTCACCGGCTGCGTGTGGCGGTCTCCACCGTTGAATGTCTGCCGGAGGAAAAAATTGACGGCGTTTCGGAAATTCCGGTGAGGGAGAACGGCGGCGGACGGGGAAATCGGAGTTTTGGGTTGGAGGTGTCGGAGTTGGACTCGCCGCATATTGACTGGATATCGGAATTGTTGCAGTAA

Protein sequence

MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGNRSFGLEVSELDSPHIDWISELLQ

Homology

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BLAST of Cla97C07G144080 vs. NCBI nr
Match: XP_008454474.1 (PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo])

HSP 1 Score: 401.4 bits (1030), Expect = 2.0e-108
Identity = 187/216 (86.57%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSA+SLPE T    TE++DDTAVFS+DEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSE 180
           RTRACNAGRFCQRKVCFFAHSPEELRP+TK KFNLNA R RVAV+ VE  PEEK DG+ E
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180

Query: 181 IPVRENGGGRGN-RSFGLEVSELDSPHIDWISELLQ 216
           IP RENGGGR N RSFG +VSEL+ PHI+WISELL+
Sbjct: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

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BLAST of Cla97C07G144080 vs. NCBI nr
Match: XP_004146938.1 (PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 8.6e-104
Identity = 179/216 (82.87%), Postives = 194/216 (89.81%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFS +SLPE T    TE+ DDTAVFSSDEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSVVSLPELTVGNLTEKTDDTAVFSSDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPR+FNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRQFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSE 180
           RTRACNAGRFCQRKVCFFAHSPEELRP+TKQK + +AH+ RVAV  +E  PEEK DG+ E
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKQKSSFSAHQQRVAVDAIESPPEEKNDGILE 180

Query: 181 IPVRENGGGRGN-RSFGLEVSELDSPHIDWISELLQ 216
           IP R +G GR N RSFGL+V+EL+ PHI+WISELL+
Sbjct: 181 IPARVSGSGRKNERSFGLDVTELELPHIEWISELLK 216

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BLAST of Cla97C07G144080 vs. NCBI nr
Match: XP_023553083.1 (zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93
Identity = 165/218 (75.69%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFT--NSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRN 60
           M QGFVFGINDVYGHEF+A++LPEF   N++ T Q DDTA+F+SDEFRMY++KIQRCP++
Sbjct: 1   MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGV 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRP+TK K + +A   RVA++ +E   E K DGV
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARVALAALEYPVERKNDGV 180

Query: 181 SEIPVRENGGGRGN-RSFGLEVSELDSPHIDWISELLQ 216
           SEIPV+E   G GN RS  LE SE + PHI+WISELLQ
Sbjct: 181 SEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

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BLAST of Cla97C07G144080 vs. NCBI nr
Match: XP_022922815.1 (zinc finger CCCH domain-containing protein 54 [Cucurbita moschata])

HSP 1 Score: 350.1 bits (897), Expect = 5.2e-93
Identity = 164/218 (75.23%), Postives = 187/218 (85.78%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFT--NSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRN 60
           M QGFVFGINDVYGHEF+A++LPEF   N++ T Q DDTA+F+SDEFRMY++KIQRCP++
Sbjct: 1   MLQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTDDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGV 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRP+TK K + +A   R A++ +E   E K DGV
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKLKLHFDAPVARAALAALEYPVERKNDGV 180

Query: 181 SEIPVRENGGGRGN-RSFGLEVSELDSPHIDWISELLQ 216
           SEIPV+E   G GN RS  LE SE + PHI+WISELLQ
Sbjct: 181 SEIPVKEISDGLGNERSSELEASEFELPHIEWISELLQ 218

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BLAST of Cla97C07G144080 vs. NCBI nr
Match: XP_022985508.1 (zinc finger CCCH domain-containing protein 54 [Cucurbita maxima])

HSP 1 Score: 340.9 bits (873), Expect = 3.2e-90
Identity = 161/218 (73.85%), Postives = 184/218 (84.40%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFT--NSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRN 60
           MFQGFVFGINDVYGHEF+A++LPEF   N++ T Q +DTA+F+SDEFRMY++KIQRCP++
Sbjct: 1   MFQGFVFGINDVYGHEFTAVALPEFAYRNTRLTPQTNDTALFNSDEFRMYAFKIQRCPKS 60

Query: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPA 120
           RSHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFR+GSCPKGDFCEFAHGVFE+WLHP 
Sbjct: 61  RSHDWTECPYAHRGEKAQRRDPRRFNYSAVACPAFRTGSCPKGDFCEFAHGVFEFWLHPT 120

Query: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGV 180
           RYRTRACNAGRFCQRKVCFFAHSPEELRP+TK K +  A   R A++ ++   E K DGV
Sbjct: 121 RYRTRACNAGRFCQRKVCFFAHSPEELRPETKNKLHFAAPVERAALAALKYPVERKNDGV 180

Query: 181 SEIPVRENGGGRGN-RSFGLEVSELDSPHIDWISELLQ 216
           SEI   E   G GN RS  LE SE + PHI+WISELLQ
Sbjct: 181 SEIXXXEISDGLGNERSSELEASESELPHIEWISELLQ 218

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BLAST of Cla97C07G144080 vs. TrEMBL
Match: tr|A0A1S3BYP8|A0A1S3BYP8_CUCME (zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC103494870 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.3e-108
Identity = 187/216 (86.57%), Postives = 198/216 (91.67%), Query Frame = 0


Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSA+SLPE T    TE++DDTAVFS+DEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSE 180
           RTRACNAGRFCQRKVCFFAHSPEELRP+TK KFNLNA R RVAV+ VE  PEEK DG+ E
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180

Query: 181 IPVRENGGGRGN-RSFGLEVSELDSPHIDWISELLQ 216
           IP RENGGGR N RSFG +VSEL+ PHI+WISELL+
Sbjct: 181 IPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216

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BLAST of Cla97C07G144080 vs. TrEMBL
Match: tr|A0A2I4FHE0|A0A2I4FHE0_9ROSI (zinc finger CCCH domain-containing protein 54 OS=Juglans regia OX=51240 GN=LOC108998817 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 4.9e-63
Identity = 132/241 (54.77%), Postives = 159/241 (65.98%), Query Frame = 0


Query: 8   GINDVYGHEFSAMSLPE-FTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTEC 67
           GIN  + ++FS    P+  T S+      D AVF +DEFRMY++KI+RCPR RSHDWTEC
Sbjct: 4   GINPGF-YDFSEQQFPQVVTPSEFNSDHIDNAVFGTDEFRMYAFKIKRCPRVRSHDWTEC 63

Query: 68  PYAHRGEKAQRRDPRRFNYTAVACPAFR-SGSCPKGDFCEFAHGVFEYWLHPARYRTRAC 127
           PYAHRGEKAQRRDP +FNY+A+ACPAFR +G CPK D CEFAHGVFEYWLHPARYRTRAC
Sbjct: 64  PYAHRGEKAQRRDPSKFNYSAIACPAFRMNGKCPKSDACEFAHGVFEYWLHPARYRTRAC 123

Query: 128 NAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLR------------VAVSTVECLPEE 187
           NAG++CQRKVCFFAH+PE+LR +TK KF+  A+R R             A+S V  +PE+
Sbjct: 124 NAGKYCQRKVCFFAHTPEQLRSETKYKFHY-AYRARNNGTGDRSNGNEGAISAVPPVPEQ 183

Query: 188 K---------IDGVSEI----------PVRENGGGRGNRSFGLEVSELDSPHIDWISELL 216
                      DGVSE              E G  R + S   E+ + D PH+ WISELL
Sbjct: 184 LTRKKNESNCFDGVSEFLKTLRGLKIRDCEEAGDQRSSTSNCWELPDSDLPHLGWISELL 242

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BLAST of Cla97C07G144080 vs. TrEMBL
Match: tr|A0A2N9G8R6|A0A2N9G8R6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23742 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.6e-61
Identity = 127/234 (54.27%), Postives = 150/234 (64.10%), Query Frame = 0


Query: 8   GIN-DVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTEC 67
           GIN  +YG  FS   +P    ++      D  +F SDEFRMY+YKI+RCPR RSHDWTEC
Sbjct: 4   GINPSIYG--FSEHQIPNLVPAEYNNDTIDEVIFGSDEFRMYAYKIKRCPRMRSHDWTEC 63

Query: 68  PYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACN 127
           PYAHRGEKAQRRDPR+F Y+A+ACPAFR+G C KGD CEFAHGVFEYWLHPARYRTRACN
Sbjct: 64  PYAHRGEKAQRRDPRKFIYSAIACPAFRNGKCLKGDACEFAHGVFEYWLHPARYRTRACN 123

Query: 128 AGRFCQRKVCFFAHSPEELRPDTKQK--------------------FNLNAHRLRVAVST 187
           AGR+CQRKVCFFAH+PE+LR +TK K                     N+      V V  
Sbjct: 124 AGRYCQRKVCFFAHTPEQLRSETKYKCHYTYRPRMINGGDDGVRDGSNVPGKATSVPVQN 183

Query: 188 VECLPEEKIDGVSEI-----PVRENGGGRGNRSFGLEVSELDSPHIDWISELLQ 216
           V+ L     DGVSE       ++      G RS    +S+ D P IDWIS+L+Q
Sbjct: 184 VD-LQGCCCDGVSEFLKSLRSLKIRDFEEGGRSSNWGLSDSDLPQIDWISDLVQ 234

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BLAST of Cla97C07G144080 vs. TrEMBL
Match: tr|A0A2P4KYC2|A0A2P4KYC2_QUESU (Zinc finger ccch domain-containing protein 54 OS=Quercus suber OX=58331 GN=CFP56_42477 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61
Identity = 130/241 (53.94%), Postives = 153/241 (63.49%), Query Frame = 0


Query: 8   GIN-DVYG---HEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDW 67
           GIN  +YG   H+F  +  PE+ N+       D A+F SDEFRMY+YKI+RCPR RSHDW
Sbjct: 4   GINPSIYGFSEHQFPNLVPPEYYNNTINNDHIDEAIFGSDEFRMYAYKIKRCPRMRSHDW 63

Query: 68  TECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTR 127
           TECPYAHRGEKAQRRDPR+F+Y+AVAC AFR+G C KGD CEFAHGVFEYWLHPARYRTR
Sbjct: 64  TECPYAHRGEKAQRRDPRKFSYSAVACSAFRTGKCHKGDTCEFAHGVFEYWLHPARYRTR 123

Query: 128 ACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVA-------------VSTVECL 187
           ACNAGR+CQRKVCFFAH+PE+LR +T  K +       ++              +T   L
Sbjct: 124 ACNAGRYCQRKVCFFAHTPEQLRSETNYKCHYTYRPRMISGGDGVRDGSSGQEDATTPHL 183

Query: 188 P---------EEK-------IDGVSEIPVRENGGGRGNRSFGLEVSELDSPHIDWISELL 216
           P         E+K        DGVSE      G    +     E SE D P IDWISEL+
Sbjct: 184 PXXXXXXXXXEKKHVVENFCCDGVSEFLKSLRGLKIRDVEDNCESSESDLPQIDWISELV 243

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BLAST of Cla97C07G144080 vs. TrEMBL
Match: tr|A0A1Q3DA28|A0A1Q3DA28_CEPFO (Zf-CCCH domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32752 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.5e-59
Identity = 115/210 (54.76%), Postives = 152/210 (72.38%), Query Frame = 0


Query: 11  DVYGHEFSAMS-LPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYA 70
           D+  H  + ++ L   T  Q    +D  +++SSDEFRMY++KI++C R RSHDWTECPYA
Sbjct: 10  DLTSHRLATLNYLNPNTCKQDAANVDLESIYSSDEFRMYAFKIKKCTRTRSHDWTECPYA 69

Query: 71  HRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGR 130
           HRGEKAQRRDPR+ +Y+A+ACPAFR+G C +GD CEFAHGVFEYWLHPARYRTRAC+AGR
Sbjct: 70  HRGEKAQRRDPRKMHYSAIACPAFRNGKCNRGDACEFAHGVFEYWLHPARYRTRACHAGR 129

Query: 131 FCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRV----AVSTVECLPEEKIDGVSE-IPVR 190
           FCQRKVCFFAH+PE+LR +TK K    A+R R+      +T   L  + + G+S  + +R
Sbjct: 130 FCQRKVCFFAHTPEQLRTETKYKCRY-AYRPRLLNTGRSATSSPLGSDFLMGLSRGVNIR 189

Query: 191 ENGGGRGNRSFGLEVSELDSPHIDWISELL 215
           ++     + S G + S+ D P IDWIS+L+
Sbjct: 190 DD-----DDSIGFDGSDFDLPDIDWISDLV 213

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BLAST of Cla97C07G144080 vs. Swiss-Prot
Match: sp|O65036|C3H54_ARATH (Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN=PEI1 PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.7e-56
Identity = 105/163 (64.42%), Postives = 116/163 (71.17%), Query Frame = 0


Query: 30  STEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVA 89
           S   IDD A++ SDEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVA
Sbjct: 39  SIPNIDD-AIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVA 98

Query: 90  CPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDT 149
           CPAFR+G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR   
Sbjct: 99  CPAFRNGACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSE 158

Query: 150 KQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGN 193
                   HR R A                  PVR  GGG G+
Sbjct: 159 ------GKHRCRYAYR----------------PVRARGGGNGD 178

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BLAST of Cla97C07G144080 vs. Swiss-Prot
Match: sp|O82307|C3H23_ARATH (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.7e-45
Identity = 80/140 (57.14%), Postives = 101/140 (72.14%), Query Frame = 0


Query: 11  DVYGHEFSAMSLPEFTNSQSTEQIDD----TAVFSSDEFRMYSYKIQRCPRNRSHDWTEC 70
           D +   F  +   E TN   +   D+    T  FSSDEFR+Y +KI+RC R RSHDWTEC
Sbjct: 53  DSFASLFRYLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTEC 112

Query: 71  PYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACN 130
           P+AH GEKA+RRDPR+F+Y+  ACP FR GSC +GD CEF+HGVFE WLHP+RYRT+ C 
Sbjct: 113 PFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCK 172

Query: 131 AGRFCQRKVCFFAHSPEELR 147
            G  C+R++CFFAH+ E+LR
Sbjct: 173 DGTSCRRRICFFAHTTEQLR 192

[Close]

BLAST of Cla97C07G144080 vs. Swiss-Prot
Match: sp|Q9M0G2|C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.1e-44
Identity = 74/107 (69.16%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 40  FSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           +S D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C 
Sbjct: 75  YSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCK 134

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 147
           KGD CEFAHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR
Sbjct: 135 KGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLR 181

[Close]

BLAST of Cla97C07G144080 vs. Swiss-Prot
Match: sp|O82199|C3H20_ARATH (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.2e-44
Identity = 76/130 (58.46%), Postives = 97/130 (74.62%), Query Frame = 0


Query: 40  FSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           ++ D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+F+Y+  ACP FR G C 
Sbjct: 74  YTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCK 133

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR------PDTKQKF 159
           +GD CEF+HGVFE WLHPARYRT+ C  G  C+R+VCFFAHSP+++R      PD    F
Sbjct: 134 RGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLPNQSPDRVDSF 193

Query: 160 NLNAHRLRVA 164
           ++ +  +R A
Sbjct: 194 DVLSPTIRRA 203

[Close]

BLAST of Cla97C07G144080 vs. Swiss-Prot
Match: sp|P93755|C3H30_ARATH (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=At2g41900 PE=1 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 76/127 (59.84%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 21  SLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDP 80
           SLP+  NS          ++++DEFRMYS+K++ C R  SHDWTECP+ H GE A+RRDP
Sbjct: 248 SLPDIKNS----------IYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDP 307

Query: 81  RRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH 140
           R+F+Y+ V CP FR G+C +GD CE+AHGVFE WLHPA+YRTR C  G  C R+VCFFAH
Sbjct: 308 RKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAH 364

Query: 141 SPEELRP 148
           +PEELRP
Sbjct: 368 TPEELRP 364

[Close]

BLAST of Cla97C07G144080 vs. TAIR10
Match: AT5G07500.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-57
Identity = 105/163 (64.42%), Postives = 116/163 (71.17%), Query Frame = 0


Query: 30  STEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVA 89
           S   IDD A++ SDEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVA
Sbjct: 39  SIPNIDD-AIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVA 98

Query: 90  CPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDT 149
           CPAFR+G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR   
Sbjct: 99  CPAFRNGACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSE 158

Query: 150 KQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGN 193
                   HR R A                  PVR  GGG G+
Sbjct: 159 ------GKHRCRYAYR----------------PVRARGGGNGD 178

[Close]

BLAST of Cla97C07G144080 vs. TAIR10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 182.6 bits (462), Expect = 2.6e-46
Identity = 80/140 (57.14%), Postives = 101/140 (72.14%), Query Frame = 0


Query: 11  DVYGHEFSAMSLPEFTNSQSTEQIDD----TAVFSSDEFRMYSYKIQRCPRNRSHDWTEC 70
           D +   F  +   E TN   +   D+    T  FSSDEFR+Y +KI+RC R RSHDWTEC
Sbjct: 53  DSFASLFRYLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTEC 112

Query: 71  PYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACN 130
           P+AH GEKA+RRDPR+F+Y+  ACP FR GSC +GD CEF+HGVFE WLHP+RYRT+ C 
Sbjct: 113 PFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCK 172

Query: 131 AGRFCQRKVCFFAHSPEELR 147
            G  C+R++CFFAH+ E+LR
Sbjct: 173 DGTSCRRRICFFAHTTEQLR 192

[Close]

BLAST of Cla97C07G144080 vs. TAIR10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-45
Identity = 74/107 (69.16%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 40  FSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           +S D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C 
Sbjct: 75  YSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCK 134

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 147
           KGD CEFAHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR
Sbjct: 135 KGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLR 181

[Close]

BLAST of Cla97C07G144080 vs. TAIR10
Match: AT2G19810.1 (CCCH-type zinc finger family protein)

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-45
Identity = 76/130 (58.46%), Postives = 97/130 (74.62%), Query Frame = 0


Query: 40  FSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           ++ D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+F+Y+  ACP FR G C 
Sbjct: 74  YTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCK 133

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR------PDTKQKF 159
           +GD CEF+HGVFE WLHPARYRT+ C  G  C+R+VCFFAHSP+++R      PD    F
Sbjct: 134 RGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLPNQSPDRVDSF 193

Query: 160 NLNAHRLRVA 164
           ++ +  +R A
Sbjct: 194 DVLSPTIRRA 203

[Close]

BLAST of Cla97C07G144080 vs. TAIR10
Match: AT2G41900.1 (CCCH-type zinc finger protein with ARM repeat domain)

HSP 1 Score: 177.9 bits (450), Expect = 6.5e-45
Identity = 76/127 (59.84%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 21  SLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDP 80
           SLP+  NS          ++++DEFRMYS+K++ C R  SHDWTECP+ H GE A+RRDP
Sbjct: 248 SLPDIKNS----------IYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDP 307

Query: 81  RRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH 140
           R+F+Y+ V CP FR G+C +GD CE+AHGVFE WLHPA+YRTR C  G  C R+VCFFAH
Sbjct: 308 RKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAH 364

Query: 141 SPEELRP 148
           +PEELRP
Sbjct: 368 TPEELRP 364

The following BLAST results are available for this feature:

BLAST of Cla97C07G144080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454474.1	2.0e-108	86.57	PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo]	[more]
XP_004146938.1	8.6e-104	82.87	PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis sativus]	[more]
XP_023553083.1	1.8e-93	75.69	zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo]	[more]
XP_022922815.1	5.2e-93	75.23	zinc finger CCCH domain-containing protein 54 [Cucurbita moschata]	[more]
XP_022985508.1	3.2e-90	73.85	zinc finger CCCH domain-containing protein 54 [Cucurbita maxima]	[more]

BLAST of Cla97C07G144080 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYP8\|A0A1S3BYP8_CUCME	1.3e-108	86.57	zinc finger CCCH domain-containing protein 54 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A2I4FHE0\|A0A2I4FHE0_9ROSI	4.9e-63	54.77	zinc finger CCCH domain-containing protein 54 OS=Juglans regia OX=51240 GN=LOC10...	[more]
tr\|A0A2N9G8R6\|A0A2N9G8R6_FAGSY	1.6e-61	54.27	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23742 PE=4 SV=1	[more]
tr\|A0A2P4KYC2\|A0A2P4KYC2_QUESU	2.1e-61	53.94	Zinc finger ccch domain-containing protein 54 OS=Quercus suber OX=58331 GN=CFP56...	[more]
tr\|A0A1Q3DA28\|A0A1Q3DA28_CEPFO	2.5e-59	54.76	Zf-CCCH domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_...	[more]

BLAST of Cla97C07G144080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O65036\|C3H54_ARATH	2.7e-56	64.42	Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|O82307\|C3H23_ARATH	4.7e-45	57.14	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9M0G2\|C3H49_ARATH	3.1e-44	69.16	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|O82199\|C3H20_ARATH	5.2e-44	58.46	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|P93755\|C3H30_ARATH	1.2e-43	59.84	Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cla97C07G144080 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07500.1	1.5e-57	64.42	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.1	2.6e-46	57.14	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT4G29190.1	1.7e-45	69.16	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G19810.1	2.9e-45	58.46	CCCH-type zinc finger family protein	[more]
AT2G41900.1	6.5e-45	59.84	CCCH-type zinc finger protein with ARM repeat domain	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036855	Znf_CCCH_sf
IPR000571	Znf_CCCH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G144080.1	Cla97C07G144080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 84..110 e-value: 1.2E-5 score: 34.7 coord: 119..142 e-value: 13.0 score: 7.5
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 88..109 e-value: 1.1E-5 score: 25.1
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 84..111 score: 13.197
None	No IPR available	GENE3D	G3DSA:4.10.1000.10		coord: 81..153 e-value: 1.8E-7 score: 33.0
None	No IPR available	PANTHER	PTHR14493	UNCHARACTERIZED	coord: 30..150
None	No IPR available	PANTHER	PTHR14493:SF74	RING FINGER PROTEIN UNKEMPT	coord: 30..150
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	SSF90229	CCCH zinc finger	coord: 83..114

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G144080	Cla010708	Watermelon (97103) v1	wmwmbB174
Cla97C07G144080	MELO3C017641	Melon (DHL92) v3.5.1	mewmbB498
Cla97C07G144080	ClCG07G017030	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G144080	CSPI04G04180	Wild cucumber (PI 183967)	cpiwmbB326
Cla97C07G144080	Cucsa.094060	Cucumber (Gy14) v1	cgywmbB112
Cla97C07G144080	CmaCh16G002210	Cucurbita maxima (Rimu)	cmawmbB352
Cla97C07G144080	CmoCh16G002390	Cucurbita moschata (Rifu)	cmowmbB337
Cla97C07G144080	Lsi07G001210	Bottle gourd (USVL1VR-Ls)	lsiwmbB406
Cla97C07G144080	CsGy4G004090	Cucumber (Gy14) v2	cgybwmbB298
Cla97C07G144080	MELO3C017641.2	Melon (DHL92) v3.6.1	medwmbB491
Cla97C07G144080	Carg16762	Silver-seed gourd	carwmbB0911
Cla97C07G144080	CsaV3_4G004250	Cucumber (Chinese Long) v3	cucwmbB324
Cla97C07G144080	Bhi01G002001	Wax gourd	wgowmbB222

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C07G144080	Watermelon (97103) v2	wmbwmbB033
Cla97C07G144080	Silver-seed gourd	carwmbB0400
Cla97C07G144080	Silver-seed gourd	carwmbB0744
Cla97C07G144080	Cucumber (Gy14) v2	cgybwmbB378
Cla97C07G144080	Cucurbita maxima (Rimu)	cmawmbB656
Cla97C07G144080	Cucurbita maxima (Rimu)	cmawmbB775
Cla97C07G144080	Cucurbita moschata (Rifu)	cmowmbB630
Cla97C07G144080	Cucurbita moschata (Rifu)	cmowmbB749
Cla97C07G144080	Wild cucumber (PI 183967)	cpiwmbB414
Cla97C07G144080	Cucumber (Chinese Long) v3	cucwmbB410
Cla97C07G144080	Cucumber (Chinese Long) v2	cuwmbB316
Cla97C07G144080	Cucumber (Chinese Long) v2	cuwmbB394
Cla97C07G144080	Bottle gourd (USVL1VR-Ls)	lsiwmbB028
Cla97C07G144080	Melon (DHL92) v3.6.1	medwmbB031
Cla97C07G144080	Melon (DHL92) v3.5.1	mewmbB035
Cla97C07G144080	Watermelon (Charleston Gray)	wcgwmbB117