ClCG07G017030 (gene) Watermelon (Charleston Gray)

Overview
NameClCG07G017030
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionZinc finger CCCH domain-containing protein
LocationCG_Chr07 : 33584932 .. 33586034 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCAAGGGTTTGTTTTCGGCATTAATGACGTGTACGGCCACGAATTCTCCGCCATGTCTCTGCCGGAATTCACTAACAGCCAGTCAACGGAACAAATCGACGACACGGCGGTGTTCAGCTCCGACGAGTTTCGAATGTACTCGTACAAGATCCAACGGTGTCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAACTACACTGCTGTCGCCTGCCCGGCTTTCCGGTCGGGCAGCTGCCCCAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTACTGGCTTCACCCGGCCCGTTACCGGACCCGGGCTTGTAATGCTGGCCGGTTTTGCCAACGGAAAGTTTGTTTTTTCGCTCACTCGCCGGAGGAGCTCCGGCCAGATACCAAACAGAAATTTAATCTTAATGCTCACCGGCTGCGTGTGGCGGTCTCCACCGTTGAATGTCTGCCGGAGGAAAAAATTGACGGCGTTTCGGAAATTCCGGTGAGGGAGAACGGCGGCGGACGGGGAAATCGGAGTTTTGGGTTGGAGGTGTCGGAGTTGGACTCGCCGCATATTGACTGGATATCGGAATTGTTGCAGTAAATTAAATAAAAATAAAAAATCTTTTGGGGTTAATATGTAAAGATTTCTTTCATAGTCAAAGATTTCAATTGCTTGGTGATTGATTTTTTTTTTTTTTTTTTTTTTTTTTTNATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTACTGGCTTCACCCGGCCCGTTACCGGACCCGGGCTTGTAATGCTGGCCGGTTTTGCCAACGGAAAGTTTGTTTTTTCGCTCACTCGCCGGAGGAGCTCCGGCCAGATACCAAACAGAAATTTAATCTTAATGCTCACCGGCTGCGTGTGGCGGTCTCCACCGTTGAATGTCTGCCGGAGGAAAAAATTGACGGCGTTTCGGAAATTCCGGTGAGGGAGAACGGCGGCGGACGGGGAAATCGGAGTTTTGGGTTGGAGGTGTCGGAGTTGGACTCGCCGCATATTGACTGGATATCGGAATTGTTGCAGTAA

mRNA sequence

ATGTTCCAAGGGTTTGTTTTCGGCATTAATGACGTGTACGGCCACGAATTCTCCGCCATGTCTCTGCCGGAATTCACTAACAGCCAGTCAACGGAACAAATCGACGACACGGCGGTGTTCAGCTCCGACGAGTTTCGAATGTACTCGTACAAGATCCAACGGTGTCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAACTACACTGCTGTCGCCTGCCCGGCTTTCCGGTCGGGCAGCTGCCCCAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTACTGGCTTCACCCGGCCCGTTACCGGACCCGGGCTTGTAATGCTGGCCGGTTTTGCCAACGGAAAGTTTGTTTTTTCGCTCACTCGCCGGAGGAGCTCCGGCCAGATACCAAACAGAAATTTAATCTTAATGCTCACCGGCTGCGTGTGGCGGTCTCCACCGTTGAATGTCTGCCGGAGGAAAAAATTGACGGCGTTTCGGAAATTCCGGTGAGGGAGAACGGCGGCGGACGGGGAAATCGGAGTTTTGGGTTGGAGTACTGGCTTCACCCGGCCCGTTACCGGACCCGGGCTTGTAATGCTGGCCGGTTTTGCCAACGGAAAGTTTGTTTTTTCGCTCACTCGCCGGAGGAGCTCCGGCCAGATACCAAACAGAAATTTAATCTTAATGCTCACCGGCTGCGTGTGGCGGTCTCCACCGTTGAATGTCTGCCGGAGGAAAAAATTGACGGCGTTTCGGAAATTCCGGTGAGGGAGAACGGCGGCGGACGGGGAAATCGGAGTTTTGGGTTGGAGGTGTCGGAGTTGGACTCGCCGCATATTGACTGGATATCGGAATTGTTGCAGTAA

Coding sequence (CDS)

ATGTTCCAAGGGTTTGTTTTCGGCATTAATGACGTGTACGGCCACGAATTCTCCGCCATGTCTCTGCCGGAATTCACTAACAGCCAGTCAACGGAACAAATCGACGACACGGCGGTGTTCAGCTCCGACGAGTTTCGAATGTACTCGTACAAGATCCAACGGTGTCCAAGAAACCGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAACTACACTGCTGTCGCCTGCCCGGCTTTCCGGTCGGGCAGCTGCCCCAAGGGAGATTTTTGTGAATTTGCTCATGGGGTTTTCGAGTACTGGCTTCACCCGGCCCGTTACCGGACCCGGGCTTGTAATGCTGGCCGGTTTTGCCAACGGAAAGTTTGTTTTTTCGCTCACTCGCCGGAGGAGCTCCGGCCAGATACCAAACAGAAATTTAATCTTAATGCTCACCGGCTGCGTGTGGCGGTCTCCACCGTTGAATGTCTGCCGGAGGAAAAAATTGACGGCGTTTCGGAAATTCCGGTGAGGGAGAACGGCGGCGGACGGGGAAATCGGAGTTTTGGGTTGGAGTACTGGCTTCACCCGGCCCGTTACCGGACCCGGGCTTGTAATGCTGGCCGGTTTTGCCAACGGAAAGTTTGTTTTTTCGCTCACTCGCCGGAGGAGCTCCGGCCAGATACCAAACAGAAATTTAATCTTAATGCTCACCGGCTGCGTGTGGCGGTCTCCACCGTTGAATGTCTGCCGGAGGAAAAAATTGACGGCGTTTCGGAAATTCCGGTGAGGGAGAACGGCGGCGGACGGGGAAATCGGAGTTTTGGGTTGGAGGTGTCGGAGTTGGACTCGCCGCATATTGACTGGATATCGGAATTGTTGCAGTAA

Protein sequence

MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGNRSFGLEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGNRSFGLEVSELDSPHIDWISELLQ
Homology
[Close]
BLAST of ClCG07G017030 vs. Swiss-Prot
Match: C3H54_ARATH (Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana GN=PEI1 PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.7e-56
Identity = 105/163 (64.42%), Postives = 114/163 (69.94%), Query Frame = 1 

Query: 30  STEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVA 89
           S   IDD A++ SDEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVA
Sbjct: 39  SIPNIDD-AIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVA 98

Query: 90  CPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDT 149
           CPAFR+G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR   
Sbjct: 99  CPAFRNGACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSE 158

Query: 150 KQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGN 193
                   HR R A                  PVR  GGG G+
Sbjct: 159 ------GKHRCRYAYR----------------PVRARGGGNGD 178


HSP 2 Score: 81.6 bits (200), Expect = 1.6e-14
Identity = 52/131 (39.69%), Postives = 57/131 (43.51%), Query Frame = 1 

Query: 198 EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLP 257
           EYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR           HR R A   V    
Sbjct: 120 EYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSE------GKHRCRYAYRPVRARG 179

Query: 258 EEKIDGV-----------SEIPVRENGGGRGNRSFGLEVS-----------------ELD 301
               DGV           S  PVR       +    + +                  +LD
Sbjct: 180 GGNGDGVTMRMDDEGYDTSRSPVRSGKDDLDSNEEKVLLKCWSRMSIVDDHYEPSDLDLD 239

[Close]
BLAST of ClCG07G017030 vs. Swiss-Prot
Match: C3H23_ARATH (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.0e-45
Identity = 80/140 (57.14%), Postives = 99/140 (70.71%), Query Frame = 1 

Query: 11  DVYGHEFSAMSLPEFTNSQSTEQIDD----TAVFSSDEFRMYSYKIQRCPRNRSHDWTEC 70
           D +   F  +   E TN   +   D+    T  FSSDEFR+Y +KI+RC R RSHDWTEC
Sbjct: 53  DSFASLFRYLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTEC 112

Query: 71  PYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACN 130
           P+AH GEKA+RRDPR+F+Y+  ACP FR GSC +GD CEF+HGVFE WLHP+RYRT+ C 
Sbjct: 113 PFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCK 172

Query: 131 AGRFCQRKVCFFAHSPEELR 147
            G  C+R++CFFAH+ E+LR
Sbjct: 173 DGTSCRRRICFFAHTTEQLR 192


HSP 2 Score: 62.0 bits (149), Expect = 1.3e-08
Identity = 40/117 (34.19%), Postives = 54/117 (46.15%), Query Frame = 1 

Query: 120 YRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVS 179
           ++ R C  GR      C FAH  E+ R    +KF+ +              PE       
Sbjct: 96  FKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSG----------TACPE------- 155

Query: 180 EIPVRENGGGRGNR---SFGL-EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 233
               R+    RG+    S G+ E WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR
Sbjct: 156 ---FRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLR 192

[Close]
BLAST of ClCG07G017030 vs. Swiss-Prot
Match: C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-44
Identity = 81/142 (57.04%), Postives = 98/142 (69.01%), Query Frame = 1 

Query: 40  FSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           +S D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C 
Sbjct: 75  YSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCK 134

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR------PDTKQKF 159
           KGD CEFAHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR      PD    F
Sbjct: 135 KGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLRFLHTRSPDRVDSF 194

Query: 160 N----LNAHRLRVAVSTVECLP 172
           +    + A   ++++S V   P
Sbjct: 195 DVSSPIRARAFQLSISPVSGSP 216


HSP 2 Score: 65.5 bits (158), Expect = 1.2e-09
Identity = 45/148 (30.41%), Postives = 64/148 (43.24%), Query Frame = 1 

Query: 120 YRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVS 179
           ++ R C  GR      C +AH  E+ R    +K++ +              P+ +  G  
Sbjct: 85  FKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSG----------TACPDFRKGGCK 144

Query: 180 EIPVRENGGGRGNRSFGLEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR------P 239
           +    E   G        E WLHPARYRT+ C  G  C RK+CFFAHSP++LR      P
Sbjct: 145 KGDSCEFAHGV------FECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLRFLHTRSP 204

Query: 240 DTKQKFN----LNAHRLRVAVSTVECLP 258
           D    F+    + A   ++++S V   P
Sbjct: 205 DRVDSFDVSSPIRARAFQLSISPVSGSP 216

[Close]
BLAST of ClCG07G017030 vs. Swiss-Prot
Match: C3H20_ARATH (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 9.4e-44
Identity = 76/130 (58.46%), Postives = 95/130 (73.08%), Query Frame = 1 

Query: 40  FSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           ++ D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+F+Y+  ACP FR G C 
Sbjct: 74  YTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCK 133

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR------PDTKQKF 159
           +GD CEF+HGVFE WLHPARYRT+ C  G  C+R+VCFFAHSP+++R      PD    F
Sbjct: 134 RGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLPNQSPDRVDSF 193

Query: 160 NLNAHRLRVA 164
           ++ +  +R A
Sbjct: 194 DVLSPTIRRA 203


HSP 2 Score: 64.7 bits (156), Expect = 2.0e-09
Identity = 46/140 (32.86%), Postives = 64/140 (45.71%), Query Frame = 1 

Query: 120 YRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVS 179
           ++ R C  GR      C +AH  E+ R    +KF+ +              PE       
Sbjct: 84  FKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSG----------TACPE------- 143

Query: 180 EIPVRENGGGRGNR---SFGL-EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR--- 239
               R+    RG+    S G+ E WLHPARYRT+ C  G  C+R+VCFFAHSP+++R   
Sbjct: 144 ---FRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLP 203

Query: 240 ---PDTKQKFNLNAHRLRVA 250
              PD    F++ +  +R A
Sbjct: 204 NQSPDRVDSFDVLSPTIRRA 203

[Close]
BLAST of ClCG07G017030 vs. Swiss-Prot
Match: C3H30_ARATH (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g41900 PE=1 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43
Identity = 76/127 (59.84%), Postives = 94/127 (74.02%), Query Frame = 1 

Query: 21  SLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDP 80
           SLP+  NS          ++++DEFRMYS+K++ C R  SHDWTECP+ H GE A+RRDP
Sbjct: 248 SLPDIKNS----------IYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDP 307

Query: 81  RRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH 140
           R+F+Y+ V CP FR G+C +GD CE+AHGVFE WLHPA+YRTR C  G  C R+VCFFAH
Sbjct: 308 RKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAH 364

Query: 141 SPEELRP 148
           +PEELRP
Sbjct: 368 TPEELRP 364


HSP 2 Score: 64.3 bits (155), Expect = 2.6e-09
Identity = 41/114 (35.96%), Postives = 50/114 (43.86%), Query Frame = 1 

Query: 120 YRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVS 179
           ++ R C+         C F H  E  R    +KF+          S V C P+ +     
Sbjct: 267 FKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHY---------SCVPC-PDFRKGACR 326

Query: 180 EIPVRENGGGRGNRSFGLEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRP 234
              + E   G        E WLHPA+YRTR C  G  C R+VCFFAH+PEELRP
Sbjct: 327 RGDMCEYAHGV------FECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELRP 364

[Close]
BLAST of ClCG07G017030 vs. TrEMBL
Match: A0A061G6X0_THECC (Zinc finger C-x8-C-x5-C-x3-H type family protein, putative OS=Theobroma cacao GN=TCM_014841 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.3e-57
Identity = 132/266 (49.62%), Postives = 160/266 (60.15%), Query Frame = 1 

Query: 36  DTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRS 95
           D A++ SDEFRMY+YKI+RC R RSHDWTECPYAHRGEKAQRRDPR+  YTA+ACPAFR+
Sbjct: 34  DEAIYGSDEFRMYAYKIKRCTRMRSHDWTECPYAHRGEKAQRRDPRKVPYTAIACPAFRN 93

Query: 96  GSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNL 155
           G C KGD CEFAHGVFEYWLHPARYRTRACNAG FCQRKVCFFAH+P++LR ++K K   
Sbjct: 94  GRCQKGDACEFAHGVFEYWLHPARYRTRACNAGTFCQRKVCFFAHTPDQLRAESKCKCPF 153

Query: 156 NAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGNRSFGLEYWLHPARYRTRACNAGR 215
            A++ R+         +E + G+       +GGG G+ S     +  P      A    R
Sbjct: 154 -AYKGRMNGG------DELLMGIG------SGGGEGSTSIQAHDFSVPF-----ASTVNR 213

Query: 216 FCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGG 275
            C    C F    + LR        L A ++R          EE      E     NGG 
Sbjct: 214 DC----CSFEGFSDFLR-------RLRAFKIR----------EE------EERAMRNGG- 247

Query: 276 RGNRSFGLEVSELDSPHIDWISELLQ 302
                 G EVS+ D PH+DWISEL++
Sbjct: 274 ------GFEVSDSDLPHLDWISELVK 247

[Close]
BLAST of ClCG07G017030 vs. TrEMBL
Match: W9SQQ1_9ROSA (Zinc finger CCCH domain-containing protein 54 OS=Morus notabilis GN=L484_017071 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.2e-56
Identity = 103/163 (63.19%), Postives = 124/163 (76.07%), Query Frame = 1 

Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRS 60
           M +G    + D   H +    L   T ++  ++  + A++ SDEFRMY+YKI+RCPR RS
Sbjct: 1   MLKGINPTVYDFSDHHY----LSAATAAELNDRAVNEAIYGSDEFRMYAYKIKRCPRMRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPR+ NY A+ CPAFR+G C KGD CEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRKHNYAAIVCPAFRNGGCEKGDACEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVA 164
           RTRACN+G+FCQRKVCFFAHSPE+LRP+TK K +     +R A
Sbjct: 121 RTRACNSGQFCQRKVCFFAHSPEQLRPETKLKRHYAYRAIRTA 159

[Close]
BLAST of ClCG07G017030 vs. TrEMBL
Match: W9SQQ1_9ROSA (Zinc finger CCCH domain-containing protein 54 OS=Morus notabilis GN=L484_017071 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24
Identity = 98/328 (29.88%), Postives = 141/328 (42.99%), Query Frame = 1 

Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRS 60
           M +G    + D   H +    L   T ++  ++  + A++ SDEFRMY+YKI+RCPR RS
Sbjct: 1   MLKGINPTVYDFSDHHY----LSAATAAELNDRAVNEAIYGSDEFRMYAYKIKRCPRMRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGS-CPKGDFCEFAHGVFEYWLHPAR 120
           HDWTECPYAHRGEKAQRRDPR+ NY A+ CPAFR+   C KGD CE              
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRKHNYAAIVCPAFRN-GGCEKGDACE-------------- 120

Query: 121 YRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVS 180
                             FAH   E        + L+  R R          + K+   +
Sbjct: 121 ------------------FAHGVFE--------YWLHPARYRTRACNSGQFCQRKVCFFA 180

Query: 181 EIPVRENGGGRGNRSFGLEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKF 240
             P +     +  R +           RT + +A     +K  F + +  +    T    
Sbjct: 181 HSPEQLRPETKLKRHYAYR------AIRTASIDAMNDINKK--FISTNGGDGSAATSSSS 240

Query: 241 NLNAHRLRVAVSTVECLPEEKIDGVSE-------IPVRENGGG----------------- 300
           +  +  LR  VS +  + ++  +  SE       + + + G G                 
Sbjct: 241 SSPSPGLRKTVSAISTIDDDSFERFSEFLKSLRALKISDGGDGHDVHDQIRRDHQRMAVM 275

Query: 301 -RGNRSFGL-EVSELDSPHIDWISELLQ 302
            R   S GL +VSE D PH++WISEL+Q
Sbjct: 301 MRSTSSSGLMDVSESDLPHVEWISELVQ 275


HSP 2 Score: 224.9 bits (572), Expect = 1.3e-55
Identity = 115/268 (42.91%), Postives = 154/268 (57.46%), Query Frame = 1 

Query: 36  DTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRS 95
           D  ++ +DEFRM++YKI+RC R R+HDWT+CPYAHRGEKAQRRDPRR  Y A+ACPAFR+
Sbjct: 34  DGEIYGADEFRMFAYKIRRCTRTRTHDWTDCPYAHRGEKAQRRDPRRIPYCAIACPAFRN 93

Query: 96  GSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNL 155
           G C KGD CEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH+PE+LR ++K + N 
Sbjct: 94  GRCYKGDSCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHTPEQLRAESKIRCNF 153

Query: 156 NAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGNRSFGLEYWLHPARYRTRACNAGR 215
            A+R R+                       +G G G+ +   ++                
Sbjct: 154 -AYRGRM-----------------------HGSGSGSSTTTKDH---------------H 213

Query: 216 FCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLP--EEKIDGVSEIPVRENG 275
           F         + PE +        +        +   + C     E +  +  + +R++ 
Sbjct: 214 FVTSSAMTMMNMPEYMMSSVTSPISTVNSSANNSDDQINCFDGVSEFLKSIKAMKIRDDN 262

Query: 276 GGRGNRSFGLEVSELDSPHIDWISELLQ 302
               +R  G EVS+ D P+I+WIS+L+Q
Sbjct: 274 NKAKSRVVGFEVSDSDLPNIEWISDLVQ 262

[Close]
BLAST of ClCG07G017030 vs. TrEMBL
Match: A0A078BZ96_BRANA (BnaA10g23940D protein OS=Brassica napus GN=BnaA10g23940D PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.1e-54
Identity = 105/172 (61.05%), Postives = 121/172 (70.35%), Query Frame = 1 

Query: 36  DTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRS 95
           D  ++SSDEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR++Y AVACPAFR+
Sbjct: 44  DDVIYSSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYSYCAVACPAFRN 103

Query: 96  GSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNL 155
           G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR         
Sbjct: 104 GACHRGDTCEFAHGVFEYWLHPARYRTRACNAGNMCQRKVCFFAHAPEQLRQSE------ 163

Query: 156 NAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGNRSFGLEY--WLHPAR 206
             HR R A   V           + +    NG G G R  G ++  W  PA+
Sbjct: 164 GKHRCRYAYRPVR----------TTVARGRNGDGVGIREDGEDFDTWQSPAK 199

[Close]
BLAST of ClCG07G017030 vs. TrEMBL
Match: A0A078BZ96_BRANA (BnaA10g23940D protein OS=Brassica napus GN=BnaA10g23940D PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.0e-12
Identity = 47/102 (46.08%), Postives = 52/102 (50.98%), Query Frame = 1 

Query: 198 EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLP 257
           EYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR           HR R A   V    
Sbjct: 120 EYWLHPARYRTRACNAGNMCQRKVCFFAHAPEQLRQSE------GKHRCRYAYRPVR--- 179

Query: 258 EEKIDGVSEIPVRENGGGRGNRSFGLEVSELDSPHIDWISEL 300
                  + +    NG G G R  G +     SP     SEL
Sbjct: 180 -------TTVARGRNGDGVGIREDGEDFDTWQSPAKSGESEL 205


HSP 2 Score: 219.5 bits (558), Expect = 5.4e-54
Identity = 102/157 (64.97%), Postives = 113/157 (71.97%), Query Frame = 1 

Query: 36  DTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRS 95
           D A++ SDEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR+
Sbjct: 44  DDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVACPAFRN 103

Query: 96  GSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNL 155
           G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR         
Sbjct: 104 GACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSE------ 163

Query: 156 NAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGN 193
             HR R A                  PVR  GGG G+
Sbjct: 164 GKHRCRYAYR----------------PVRARGGGNGD 178

[Close]
BLAST of ClCG07G017030 vs. TAIR10
Match: AT5G07500.1 (AT5G07500.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-57
Identity = 105/163 (64.42%), Postives = 114/163 (69.94%), Query Frame = 1 

Query: 30  STEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVA 89
           S   IDD A++ SDEFRMY+YKI+RCPR RSHDWTECPYAHRGEKA RRDPRR+ Y AVA
Sbjct: 39  SIPNIDD-AIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVA 98

Query: 90  CPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDT 149
           CPAFR+G+C +GD CEFAHGVFEYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR   
Sbjct: 99  CPAFRNGACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSE 158

Query: 150 KQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGN 193
                   HR R A                  PVR  GGG G+
Sbjct: 159 ------GKHRCRYAYR----------------PVRARGGGNGD 178


HSP 2 Score: 81.6 bits (200), Expect = 8.8e-16
Identity = 52/131 (39.69%), Postives = 57/131 (43.51%), Query Frame = 1 

Query: 198 EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLP 257
           EYWLHPARYRTRACNAG  CQRKVCFFAH+PE+LR           HR R A   V    
Sbjct: 120 EYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLRQSE------GKHRCRYAYRPVRARG 179

Query: 258 EEKIDGV-----------SEIPVRENGGGRGNRSFGLEVS-----------------ELD 301
               DGV           S  PVR       +    + +                  +LD
Sbjct: 180 GGNGDGVTMRMDDEGYDTSRSPVRSGKDDLDSNEEKVLLKCWSRMSIVDDHYEPSDLDLD 239

[Close]
BLAST of ClCG07G017030 vs. TAIR10
Match: AT2G25900.1 (AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 183.0 bits (463), Expect = 2.8e-46
Identity = 80/140 (57.14%), Postives = 99/140 (70.71%), Query Frame = 1 

Query: 11  DVYGHEFSAMSLPEFTNSQSTEQIDD----TAVFSSDEFRMYSYKIQRCPRNRSHDWTEC 70
           D +   F  +   E TN   +   D+    T  FSSDEFR+Y +KI+RC R RSHDWTEC
Sbjct: 53  DSFASLFRYLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTEC 112

Query: 71  PYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACN 130
           P+AH GEKA+RRDPR+F+Y+  ACP FR GSC +GD CEF+HGVFE WLHP+RYRT+ C 
Sbjct: 113 PFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCK 172

Query: 131 AGRFCQRKVCFFAHSPEELR 147
            G  C+R++CFFAH+ E+LR
Sbjct: 173 DGTSCRRRICFFAHTTEQLR 192


HSP 2 Score: 62.0 bits (149), Expect = 7.2e-10
Identity = 40/117 (34.19%), Postives = 54/117 (46.15%), Query Frame = 1 

Query: 120 YRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVS 179
           ++ R C  GR      C FAH  E+ R    +KF+ +              PE       
Sbjct: 96  FKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSG----------TACPE------- 155

Query: 180 EIPVRENGGGRGNR---SFGL-EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR 233
               R+    RG+    S G+ E WLHP+RYRT+ C  G  C+R++CFFAH+ E+LR
Sbjct: 156 ---FRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLR 192

[Close]
BLAST of ClCG07G017030 vs. TAIR10
Match: AT4G29190.1 (AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 181.8 bits (460), Expect = 6.3e-46
Identity = 81/142 (57.04%), Postives = 98/142 (69.01%), Query Frame = 1 

Query: 40  FSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           +S D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C 
Sbjct: 75  YSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCK 134

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR------PDTKQKF 159
           KGD CEFAHGVFE WLHPARYRT+ C  G  C RK+CFFAHSP++LR      PD    F
Sbjct: 135 KGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLRFLHTRSPDRVDSF 194

Query: 160 N----LNAHRLRVAVSTVECLP 172
           +    + A   ++++S V   P
Sbjct: 195 DVSSPIRARAFQLSISPVSGSP 216


HSP 2 Score: 65.5 bits (158), Expect = 6.5e-11
Identity = 45/148 (30.41%), Postives = 64/148 (43.24%), Query Frame = 1 

Query: 120 YRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVS 179
           ++ R C  GR      C +AH  E+ R    +K++ +              P+ +  G  
Sbjct: 85  FKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSG----------TACPDFRKGGCK 144

Query: 180 EIPVRENGGGRGNRSFGLEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR------P 239
           +    E   G        E WLHPARYRT+ C  G  C RK+CFFAHSP++LR      P
Sbjct: 145 KGDSCEFAHGV------FECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLRFLHTRSP 204

Query: 240 DTKQKFN----LNAHRLRVAVSTVECLP 258
           D    F+    + A   ++++S V   P
Sbjct: 205 DRVDSFDVSSPIRARAFQLSISPVSGSP 216

[Close]
BLAST of ClCG07G017030 vs. TAIR10
Match: AT2G19810.1 (AT2G19810.1 CCCH-type zinc finger family protein)

HSP 1 Score: 178.7 bits (452), Expect = 5.3e-45
Identity = 76/130 (58.46%), Postives = 95/130 (73.08%), Query Frame = 1 

Query: 40  FSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCP 99
           ++ D FRMY +K++RC R RSHDWTECPYAH GEKA+RRDPR+F+Y+  ACP FR G C 
Sbjct: 74  YTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCK 133

Query: 100 KGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR------PDTKQKF 159
           +GD CEF+HGVFE WLHPARYRT+ C  G  C+R+VCFFAHSP+++R      PD    F
Sbjct: 134 RGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLPNQSPDRVDSF 193

Query: 160 NLNAHRLRVA 164
           ++ +  +R A
Sbjct: 194 DVLSPTIRRA 203


HSP 2 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 46/140 (32.86%), Postives = 64/140 (45.71%), Query Frame = 1 

Query: 120 YRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVS 179
           ++ R C  GR      C +AH  E+ R    +KF+ +              PE       
Sbjct: 84  FKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSG----------TACPE------- 143

Query: 180 EIPVRENGGGRGNR---SFGL-EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELR--- 239
               R+    RG+    S G+ E WLHPARYRT+ C  G  C+R+VCFFAHSP+++R   
Sbjct: 144 ---FRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLP 203

Query: 240 ---PDTKQKFNLNAHRLRVA 250
              PD    F++ +  +R A
Sbjct: 204 NQSPDRVDSFDVLSPTIRRA 203

[Close]
BLAST of ClCG07G017030 vs. TAIR10
Match: AT2G41900.1 (AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain)

HSP 1 Score: 177.9 bits (450), Expect = 9.0e-45
Identity = 76/127 (59.84%), Postives = 94/127 (74.02%), Query Frame = 1 

Query: 21  SLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDP 80
           SLP+  NS          ++++DEFRMYS+K++ C R  SHDWTECP+ H GE A+RRDP
Sbjct: 248 SLPDIKNS----------IYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDP 307

Query: 81  RRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAH 140
           R+F+Y+ V CP FR G+C +GD CE+AHGVFE WLHPA+YRTR C  G  C R+VCFFAH
Sbjct: 308 RKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAH 364

Query: 141 SPEELRP 148
           +PEELRP
Sbjct: 368 TPEELRP 364


HSP 2 Score: 64.3 bits (155), Expect = 1.5e-10
Identity = 41/114 (35.96%), Postives = 50/114 (43.86%), Query Frame = 1 

Query: 120 YRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVS 179
           ++ R C+         C F H  E  R    +KF+          S V C P+ +     
Sbjct: 267 FKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHY---------SCVPC-PDFRKGACR 326

Query: 180 EIPVRENGGGRGNRSFGLEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRP 234
              + E   G        E WLHPA+YRTR C  G  C R+VCFFAH+PEELRP
Sbjct: 327 RGDMCEYAHGV------FECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELRP 364

[Close]
BLAST of ClCG07G017030 vs. NCBI nr
Match: gi|659108959|ref|XP_008454474.1| (PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 4.2e-100
Identity = 174/199 (87.44%), Postives = 182/199 (91.46%), Query Frame = 1 

Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFSA+SLPE T    TE++DDTAVFS+DEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSE 180
           RTRACNAGRFCQRKVCFFAHSPEELRP+TK KFNLNA R RVAV+ VE  PEEK DG+ E
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKNDGILE 180

Query: 181 IPVRENGGGRGN-RSFGLE 199
           IP RENGGGR N RSFG +
Sbjct: 181 IPARENGGGRKNERSFGFD 199

[Close]
BLAST of ClCG07G017030 vs. NCBI nr
Match: gi|659108959|ref|XP_008454474.1| (PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 6.7e-42
Identity = 107/220 (48.64%), Postives = 130/220 (59.09%), Query Frame = 1 

Query: 85  YTAVACPAFRSGSCPK--GDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSP 144
           ++AV+ P    G+  +   D   F+   F  +     Y+ + C   R      C +AH  
Sbjct: 17  FSAVSLPEVTVGNLTEKVDDTAVFSTDEFRMY----SYKIQRCPRNRSHDWTECPYAHRG 76

Query: 145 EELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGNRSFGLEYWLH 204
           E+ +    ++FN  A         V C P  +     +    E   G        EYWLH
Sbjct: 77  EKAQRRDPRRFNYTA---------VAC-PAFRSGSCPKGDFCEFAHGV------FEYWLH 136

Query: 205 PARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKID 264
           PARYRTRACNAGRFCQRKVCFFAHSPEELRP+TK KFNLNA R RVAV+ VE  PEEK D
Sbjct: 137 PARYRTRACNAGRFCQRKVCFFAHSPEELRPETKHKFNLNAQRQRVAVAAVESPPEEKND 196

Query: 265 GVSEIPVRENGGGRGN-RSFGLEVSELDSPHIDWISELLQ 302
           G+ EIP RENGGGR N RSFG +VSEL+ PHI+WISELL+
Sbjct: 197 GILEIPARENGGGRKNERSFGFDVSELELPHIEWISELLK 216


HSP 2 Score: 359.0 bits (920), Expect = 8.1e-96
Identity = 167/199 (83.92%), Postives = 178/199 (89.45%), Query Frame = 1 

Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRS 60
           MFQGFVFGINDVYGHEFS +SLPE T    TE+ DDTAVFSSDEFRMYSYKIQRCPRNRS
Sbjct: 1   MFQGFVFGINDVYGHEFSVVSLPELTVGNLTEKTDDTAVFSSDEFRMYSYKIQRCPRNRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPR+FNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRQFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSE 180
           RTRACNAGRFCQRKVCFFAHSPEELRP+TKQK + +AH+ RVAV  +E  PEEK DG+ E
Sbjct: 121 RTRACNAGRFCQRKVCFFAHSPEELRPETKQKSSFSAHQQRVAVDAIESPPEEKNDGILE 180

Query: 181 IPVRENGGGRGN-RSFGLE 199
           IP R +G GR N RSFGL+
Sbjct: 181 IPARVSGSGRKNERSFGLD 199

[Close]
BLAST of ClCG07G017030 vs. NCBI nr
Match: gi|449458405|ref|XP_004146938.1| (PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 5.9e-38
Identity = 78/105 (74.29%), Postives = 90/105 (85.71%), Query Frame = 1 

Query: 198 EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLP 257
           EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRP+TKQK + +AH+ RVAV  +E  P
Sbjct: 112 EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPETKQKSSFSAHQQRVAVDAIESPP 171

Query: 258 EEKIDGVSEIPVRENGGGRGN-RSFGLEVSELDSPHIDWISELLQ 302
           EEK DG+ EIP R +G GR N RSFGL+V+EL+ PHI+WISELL+
Sbjct: 172 EEKNDGILEIPARVSGSGRKNERSFGLDVTELELPHIEWISELLK 216


HSP 2 Score: 235.0 bits (598), Expect = 1.8e-58
Identity = 111/169 (65.68%), Postives = 127/169 (75.15%), Query Frame = 1 

Query: 25  FTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFN 84
           F +  +  + D+  V++SDEFRMY+YK++RCPR RSHDWTECPYAHRGEKAQRRDPR+  
Sbjct: 14  FPDDPACSKFDE--VYNSDEFRMYAYKVKRCPRTRSHDWTECPYAHRGEKAQRRDPRKVR 73

Query: 85  YTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEE 144
           Y AVACPAFR GSC KG  CEFAHGVFEYWLHPARYRTRACNAG FCQRKVCFFAHSP+E
Sbjct: 74  YAAVACPAFRGGSCLKGSSCEFAHGVFEYWLHPARYRTRACNAGEFCQRKVCFFAHSPDE 133

Query: 145 LRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSEI-PVRENGGGRGN 193
           LRP+TK K + +AHR RV           +I G   + P R  G  RGN
Sbjct: 134 LRPETKYKCSRSAHRPRVV----------EIHGSRSVAPARTPGSPRGN 170

[Close]
BLAST of ClCG07G017030 vs. NCBI nr
Match: gi|702501182|ref|XP_010038410.1| (PREDICTED: zinc finger CCCH domain-containing protein 54 [Eucalyptus grandis])

HSP 1 Score: 102.4 bits (254), Expect = 1.4e-18
Identity = 56/105 (53.33%), Postives = 66/105 (62.86%), Query Frame = 1 

Query: 198 EYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLP 257
           EYWLHPARYRTRACNAG FCQRKVCFFAHSP+ELRP+TK K + +AHR RV         
Sbjct: 99  EYWLHPARYRTRACNAGEFCQRKVCFFAHSPDELRPETKYKCSRSAHRPRVV-------- 158

Query: 258 EEKIDGVSEI-PVRENGGGRGNRSFGLEVSELDSPHIDWISELLQ 302
             +I G   + P R  G  RGN    +EV        D +S+LL+
Sbjct: 159 --EIHGSRSVAPARTPGSPRGNVGSDVEVG-------DKVSDLLK 186


HSP 2 Score: 230.7 bits (587), Expect = 3.3e-57
Identity = 132/266 (49.62%), Postives = 160/266 (60.15%), Query Frame = 1 

Query: 36  DTAVFSSDEFRMYSYKIQRCPRNRSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRS 95
           D A++ SDEFRMY+YKI+RC R RSHDWTECPYAHRGEKAQRRDPR+  YTA+ACPAFR+
Sbjct: 34  DEAIYGSDEFRMYAYKIKRCTRMRSHDWTECPYAHRGEKAQRRDPRKVPYTAIACPAFRN 93

Query: 96  GSCPKGDFCEFAHGVFEYWLHPARYRTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNL 155
           G C KGD CEFAHGVFEYWLHPARYRTRACNAG FCQRKVCFFAH+P++LR ++K K   
Sbjct: 94  GRCQKGDACEFAHGVFEYWLHPARYRTRACNAGTFCQRKVCFFAHTPDQLRAESKCKCPF 153

Query: 156 NAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGGRGNRSFGLEYWLHPARYRTRACNAGR 215
            A++ R+         +E + G+       +GGG G+ S     +  P      A    R
Sbjct: 154 -AYKGRMNGG------DELLMGIG------SGGGEGSTSIQAHDFSVPF-----ASTVNR 213

Query: 216 FCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVAVSTVECLPEEKIDGVSEIPVRENGGG 275
            C    C F    + LR        L A ++R          EE      E     NGG 
Sbjct: 214 DC----CSFEGFSDFLR-------RLRAFKIR----------EE------EERAMRNGG- 247

Query: 276 RGNRSFGLEVSELDSPHIDWISELLQ 302
                 G EVS+ D PH+DWISEL++
Sbjct: 274 ------GFEVSDSDLPHLDWISELVK 247

[Close]
BLAST of ClCG07G017030 vs. NCBI nr
Match: gi|703147665|ref|XP_010109132.1| (Zinc finger CCCH domain-containing protein 54 [Morus notabilis])

HSP 1 Score: 228.4 bits (581), Expect = 1.7e-56
Identity = 103/163 (63.19%), Postives = 124/163 (76.07%), Query Frame = 1 

Query: 1   MFQGFVFGINDVYGHEFSAMSLPEFTNSQSTEQIDDTAVFSSDEFRMYSYKIQRCPRNRS 60
           M +G    + D   H +    L   T ++  ++  + A++ SDEFRMY+YKI+RCPR RS
Sbjct: 1   MLKGINPTVYDFSDHHY----LSAATAAELNDRAVNEAIYGSDEFRMYAYKIKRCPRMRS 60

Query: 61  HDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRSGSCPKGDFCEFAHGVFEYWLHPARY 120
           HDWTECPYAHRGEKAQRRDPR+ NY A+ CPAFR+G C KGD CEFAHGVFEYWLHPARY
Sbjct: 61  HDWTECPYAHRGEKAQRRDPRKHNYAAIVCPAFRNGGCEKGDACEFAHGVFEYWLHPARY 120

Query: 121 RTRACNAGRFCQRKVCFFAHSPEELRPDTKQKFNLNAHRLRVA 164
           RTRACN+G+FCQRKVCFFAHSPE+LRP+TK K +     +R A
Sbjct: 121 RTRACNSGQFCQRKVCFFAHSPEQLRPETKLKRHYAYRAIRTA 159

The following BLAST results are available for this feature:
BLAST of ClCG07G017030 vs. Swiss-Prot
Match NameE-valueIdentityDescription
C3H54_ARATH3.7e-5664.42Zinc finger CCCH domain-containing protein 54 OS=Arabidopsis thaliana GN=PEI1 PE... [more]
C3H23_ARATH5.0e-4557.14Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana GN=At2g259... [more]
C3H49_ARATH1.1e-4457.04Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g291... [more]
C3H20_ARATH9.4e-4458.46Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana GN=At2g198... [more]
C3H30_ARATH1.6e-4359.84Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g419... [more]
BLAST of ClCG07G017030 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061G6X0_THECC2.3e-5749.62Zinc finger C-x8-C-x5-C-x3-H type family protein, putative OS=Theobroma cacao GN... [more]
W9SQQ1_9ROSA1.2e-5663.19Zinc finger CCCH domain-containing protein 54 OS=Morus notabilis GN=L484_017071 ... [more]
W9SQQ1_9ROSA1.5e-2429.88Zinc finger CCCH domain-containing protein 54 OS=Morus notabilis GN=L484_017071 ... [more]
A0A078BZ96_BRANA3.1e-5461.05BnaA10g23940D protein OS=Brassica napus GN=BnaA10g23940D PE=4 SV=1[more]
A0A078BZ96_BRANA3.0e-1246.08BnaA10g23940D protein OS=Brassica napus GN=BnaA10g23940D PE=4 SV=1[more]
BLAST of ClCG07G017030 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07500.12.1e-5764.42 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G25900.12.8e-4657.14 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT4G29190.16.3e-4657.04 Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G19810.15.3e-4558.46 CCCH-type zinc finger family protein[more]
AT2G41900.19.0e-4559.84 CCCH-type zinc finger protein with ARM repeat domain[more]
BLAST of ClCG07G017030 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108959|ref|XP_008454474.1|4.2e-10087.44PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo][more]
gi|659108959|ref|XP_008454474.1|6.7e-4248.64PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo][more]
gi|449458405|ref|XP_004146938.1|5.9e-3874.29PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis sativus][more]
gi|702501182|ref|XP_010038410.1|1.4e-1853.33PREDICTED: zinc finger CCCH domain-containing protein 54 [Eucalyptus grandis][more]
gi|703147665|ref|XP_010109132.1|1.7e-5663.19Zinc finger CCCH domain-containing protein 54 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G017030.1ClCG07G017030.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeGENE3DG3DSA:4.10.1000.10coord: 89..112
score: 4.
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 88..109
score: 1.
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 84..110
score: 1.2E-5coord: 119..142
score: 13.0coord: 205..228
score:
IPR000571Zinc finger, CCCH-typePROFILEPS50103ZF_C3H1coord: 84..111
score: 13
IPR000571Zinc finger, CCCH-typeunknownSSF90229CCCH zinc fingercoord: 83..114
score: 7.2
NoneNo IPR availablePANTHERPTHR14493UNCHARACTERIZEDcoord: 14..150
score: 3.1
NoneNo IPR availablePANTHERPTHR14493:SF46ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 54coord: 14..150
score: 3.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG07G017030MELO3C017641Melon (DHL92) v3.5.1mewcgB493
ClCG07G017030Cla010708Watermelon (97103) v1wcgwmB372
ClCG07G017030Cla97C07G144080Watermelon (97103) v2wcgwmbB307
ClCG07G017030Bhi01G002001Wax gourdwcgwgoB575
ClCG07G017030CSPI04G04180Wild cucumber (PI 183967)cpiwcgB336
ClCG07G017030Cucsa.094060Cucumber (Gy14) v1cgywcgB119
ClCG07G017030CmaCh16G002210Cucurbita maxima (Rimu)cmawcgB302
ClCG07G017030CmoCh16G002390Cucurbita moschata (Rifu)cmowcgB295
ClCG07G017030Lsi07G001210Bottle gourd (USVL1VR-Ls)lsiwcgB407
ClCG07G017030CsGy4G004090Cucumber (Gy14) v2cgybwcgB297
ClCG07G017030MELO3C017641.2Melon (DHL92) v3.6.1medwcgB488
ClCG07G017030Carg16762Silver-seed gourdcarwcgB0848
ClCG07G017030CsaV3_4G004250Cucumber (Chinese Long) v3cucwcgB336
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG07G017030Watermelon (Charleston Gray)wcgwcgB108
ClCG07G017030Cucurbita maxima (Rimu)cmawcgB669
ClCG07G017030Cucurbita moschata (Rifu)cmowcgB565
ClCG07G017030Cucurbita moschata (Rifu)cmowcgB671
ClCG07G017030Wild cucumber (PI 183967)cpiwcgB424
ClCG07G017030Cucumber (Chinese Long) v2cuwcgB319
ClCG07G017030Cucumber (Chinese Long) v2cuwcgB404
ClCG07G017030Melon (DHL92) v3.5.1mewcgB035
ClCG07G017030Cucurbita pepo (Zucchini)cpewcgB211
ClCG07G017030Cucurbita pepo (Zucchini)cpewcgB403
ClCG07G017030Cucurbita pepo (Zucchini)cpewcgB688
ClCG07G017030Cucumber (Gy14) v2cgybwcgB372
ClCG07G017030Silver-seed gourdcarwcgB0373
ClCG07G017030Silver-seed gourdcarwcgB0691
ClCG07G017030Cucumber (Chinese Long) v3cucwcgB426
ClCG07G017030Watermelon (97103) v2wcgwmbB285