Cla97C01G014340 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G014340
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	photosystem I reaction center subunit N, chloroplastic
Location	Cla97Chr01 : 28072170 .. 28073342 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCCGGAGCTGGGTCAGCTGACCTGAACTCCAAACTCACCGCCGTCCCTTCTGTTGCGTCTCCTGGGGTTGTGGGATACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCACCCTCTTTGCTGCTGCTGCGGCTGCCTCCAACTCCTCTGCCAATGCTGGAGTCATTGAAGATTACCTTGAGAAGAGTAAAGCTAACAAGGTAACTGTACATAAAAGTTCAAATTGCTTTTATCGCTCTGTTTCCATACTTGAGTTAGCATAAAATGATAAGAATATGAAACAGAAATGGGGGATTTGTATGGGTTTGATGTGATGATATAGTATTAAATTCTTCTTTATCCATTAGCTTAAATTTTTGAGTTAATTGGTGATTTAAGATGGGATCTACAACCTTATATGTCTTCTCTAATTAATATTGATTTTTCACTTATTGAGTCTTCTACATATTTCAAACCTACAAATGTAGGGAGTGTTAGCTTTTGGGTCAATCAGTGATTTAAGAGTATCTTAAACTAAAAGTATGTATCACGTATGCTGAAGACAAAAAACAGGGAGTATGTCTTTAACATTCATGTTCAATGTTATGCTGATTGCTGAAGTTTGAAGCTGAGGACTAATATAGAAATAGAGTGTTTCAAAGTATAGGGAAATGGATCAAAGTAAAGGGACTGAATCAGGATTTAGATGGAAAAAACCTTAATGTTTGTAACCTGCTATTGCAATTTTCAACAGGAGTTGAATGACAAGAAACGATTGGCAACAAGTGGGGCAAACTTTGCAAGGGCATACACTGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGGTTTGGACATAGGTTTAGTTGTAAATTGTAATCACGATTGGTTCTTTTTCTAAATGCTGACAATATGAGTTGAGTTTTTGCTGAGTACTAAGTTAGTTCTCTGTTCTGTTTTTGATTGATGCAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGTAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA

mRNA sequence

ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCCGGAGCTGGGTCAGCTGACCTGAACTCCAAACTCACCGCCGTCCCTTCTGTTGCGTCTCCTGGGGTTGTGGGATACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCACCCTCTTTGCTGCTGCTGCGGCTGCCTCCAACTCCTCTGCCAATGCTGGAGTCATTGAAGATTACCTTGAGAAGAGTAAAGCTAACAAGGAGTTGAATGACAAGAAACGATTGGCAACAAGTGGGGCAAACTTTGCAAGGGCATACACTGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGTAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA

Coding sequence (CDS)

ATGGCCACCATGAATTCCAGTGTTCTGGCTTGCAACTACGCCATTTCCGGAGCTGGGTCAGCTGACCTGAACTCCAAACTCACCGCCGTCCCTTCTGTTGCGTCTCCTGGGGTTGTGGGATACAAGTTGCCTGCGATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAACGAAGGAAGGAGGACTGCGCTTCTTTACCTTGGAGCCACCCTCTTTGCTGCTGCTGCGGCTGCCTCCAACTCCTCTGCCAATGCTGGAGTCATTGAAGATTACCTTGAGAAGAGTAAAGCTAACAAGGAGTTGAATGACAAGAAACGATTGGCAACAAGTGGGGCAAACTTTGCAAGGGCATACACTGTTGAATTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGTAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA

Protein sequence

MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAAAASNSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW

Homology

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BLAST of Cla97C01G014340 vs. NCBI nr
Match: XP_008441057.1 (PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 6.4e-86
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60
           MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG
Sbjct: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60

Query: 61  RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120
           RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 121 VEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           VEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Sbjct: 121 VEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171

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BLAST of Cla97C01G014340 vs. NCBI nr
Match: XP_004148659.1 (PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis sativus] >KGN48348.1 hypothetical protein Csa_6G483300 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 1.1e-82
Identity = 163/171 (95.32%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60
           MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQ +VPEAKN+G
Sbjct: 1   MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQTKVPEAKNDG 60

Query: 61  RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120
           RRTALLYLGA+LFAA XXXXX SANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRTALLYLGASLFAAXXXXXXXSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 121 VEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           VEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Sbjct: 121 VEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171

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BLAST of Cla97C01G014340 vs. NCBI nr
Match: XP_023003251.1 (photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 310.5 bits (794), Expect = 3.7e-81
Identity = 156/171 (91.23%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60
           MATMNSSVLACNYAISGAGSA+LNSKL+AV SVASPGV GYKLPAIRAQQARVPEAKNEG
Sbjct: 1   MATMNSSVLACNYAISGAGSAELNSKLSAVTSVASPGVSGYKLPAIRAQQARVPEAKNEG 60

Query: 61  RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120
           RRTALL+LGA+LFAAA     S+ANAGVIE+YLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRTALLFLGASLFAAAAASSNSTANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 121 VEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           V+FG+CKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Sbjct: 121 VQFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 171

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BLAST of Cla97C01G014340 vs. NCBI nr
Match: XP_022950888.1 (photosystem I reaction center subunit N, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 310.1 bits (793), Expect = 4.8e-81
Identity = 160/171 (93.57%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60
           MATMNSSVLACNYAISGAGSADL+SK+ A PSVASPGVVGYKLPAIRAQQARVPEAKN+G
Sbjct: 1   MATMNSSVLACNYAISGAGSADLSSKINAAPSVASPGVVGYKLPAIRAQQARVPEAKNDG 60

Query: 61  RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120
           RR+ALLYLGATLFAA XXXXX  ANAGVIE+YLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRSALLYLGATLFAAXXXXXXXXANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 121 VEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           V+FGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Sbjct: 121 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 171

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BLAST of Cla97C01G014340 vs. NCBI nr
Match: XP_022977968.1 (photosystem I reaction center subunit N, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 4.0e-80
Identity = 155/171 (90.64%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60
           MATMNSSVLACNYAI GAGSADL+SK+ A PSVASPGVVGYKLPAIRAQQARVPEAKN+G
Sbjct: 1   MATMNSSVLACNYAILGAGSADLSSKINAAPSVASPGVVGYKLPAIRAQQARVPEAKNDG 60

Query: 61  RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120
           RR+ALLYLGATLFAAA     +SANAGVI++YLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRSALLYLGATLFAAA-AAASNSANAGVIDEYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 121 VEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           V+FGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW
Sbjct: 121 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 170

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BLAST of Cla97C01G014340 vs. TrEMBL
Match: tr|A0A1S3B240|A0A1S3B240_CUCME (photosystem I reaction center subunit N, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485284 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 4.3e-86
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60
           MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG
Sbjct: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60

Query: 61  RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120
           RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 121 VEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           VEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Sbjct: 121 VEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171

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BLAST of Cla97C01G014340 vs. TrEMBL
Match: tr|A0A0A0KFM1|A0A0A0KFM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483300 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 7.5e-83
Identity = 163/171 (95.32%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAKNEG 60
           MATMNSSVLACNYAISGAGSADLNSKLTA PSVASPGVVGYKLPAIRAQQ +VPEAKN+G
Sbjct: 1   MATMNSSVLACNYAISGAGSADLNSKLTAAPSVASPGVVGYKLPAIRAQQTKVPEAKNDG 60

Query: 61  RRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120
           RRTALLYLGA+LFAA XXXXX SANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT
Sbjct: 61  RRTALLYLGASLFAAXXXXXXXSANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYT 120

Query: 121 VEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           VEFGTCKFPENFTGCQDLAKQKKVPFI+DDLELECEGKDKYKCGSNVFWKW
Sbjct: 121 VEFGTCKFPENFTGCQDLAKQKKVPFITDDLELECEGKDKYKCGSNVFWKW 171

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BLAST of Cla97C01G014340 vs. TrEMBL
Match: tr|A0A1R3GGP6|A0A1R3GGP6_COCAP (Photosystem I PsaN, reaction centre subunit N OS=Corchorus capsularis OX=210143 GN=CCACVL1_25930 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.5e-70
Identity = 142/174 (81.61%), Postives = 153/174 (87.93%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVV-GYKLPAIRAQQARVPEAKN- 60
           MA MNSSVLACNYAISG GS++LN+KL +VPSVASPGV  GYKLP IRAQQA+VP+    
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKLASVPSVASPGVSGGYKLPVIRAQQAKVPKESGA 60

Query: 61  -EGRRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFAR 120
            EGRR A+LYL ATLF  A     SSANAGVI++YLEKSKANKELNDKKRLATSGANFAR
Sbjct: 61  VEGRRAAMLYLAATLFTTA---AASSANAGVIDEYLEKSKANKELNDKKRLATSGANFAR 120

Query: 121 AYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           AYTV+FGTCKFPENFTGCQDLAKQKKVPFIS+DL LECEGKDKYKCGSNVFWKW
Sbjct: 121 AYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 171

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BLAST of Cla97C01G014340 vs. TrEMBL
Match: tr|A0A1J7IRQ5|A0A1J7IRQ5_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_02461 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.5e-70
Identity = 138/175 (78.86%), Postives = 154/175 (88.00%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAK--- 60
           MA MNSSVLAC Y ISG+G ++LN+KLT++PSVASP V G KL  I+AQQAR+P+AK   
Sbjct: 1   MAAMNSSVLACTYTISGSGCSELNAKLTSMPSVASPPVSGQKLHVIKAQQARIPQAKESQ 60

Query: 61  -NEGRRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFA 120
            +EGRR AL++L ATLF+ A     S+ANAGVIEDYLEKSKANKELNDKKRLATSGANFA
Sbjct: 61  ASEGRRGALVFLAATLFSTAAIASNSAANAGVIEDYLEKSKANKELNDKKRLATSGANFA 120

Query: 121 RAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           RAYTV+FGTCKFPENFTGCQDLAKQKKVPFISDDLELECEG+DKYKCGSNVFWKW
Sbjct: 121 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGRDKYKCGSNVFWKW 175

[Close]

BLAST of Cla97C01G014340 vs. TrEMBL
Match: tr|F6I0D9|F6I0D9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0044g01410 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.3e-70
Identity = 139/175 (79.43%), Postives = 154/175 (88.00%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYKLPAIRAQQARVPEAK--- 60
           MA++NSSVLACNYAISGAG+ +LNSKL ++PS ASP V G KLPAIRAQQARV ++K   
Sbjct: 1   MASVNSSVLACNYAISGAGAPELNSKLVSMPSAASPAVAGLKLPAIRAQQARVSDSKKWG 60

Query: 61  -NEGRRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFA 120
             EGRR AL+YL ATLF  A     SSANAGVI+DYLEKSKANKELNDKKRLATSGANFA
Sbjct: 61  AGEGRRAALVYLAATLFTTA--AASSSANAGVIDDYLEKSKANKELNDKKRLATSGANFA 120

Query: 121 RAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           RAYTV+FGTCKFPENFTGCQDLAK+KKVPF+S+DLELECEG+DKYKCGSNVFWKW
Sbjct: 121 RAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWKW 173

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BLAST of Cla97C01G014340 vs. Swiss-Prot
Match: sp|P49107|PSAN_ARATH (Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAN PE=1 SV=2)

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-56
Identity = 114/173 (65.90%), Postives = 138/173 (79.77%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQARVPEAK-N 60
           MA MNSSVL C+YAI+G+GS +LN K+  V S    G      +P I+AQ+    +   +
Sbjct: 1   MAAMNSSVLTCSYAIAGSGSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRVVGDDVDGS 60

Query: 61  EGRRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARA 120
            GRR+A+++L ATLF+ A     +SANAGVI++YLE+SK NKELNDKKRLATSGANFARA
Sbjct: 61  NGRRSAMVFLAATLFSTA--AVSASANAGVIDEYLERSKTNKELNDKKRLATSGANFARA 120

Query: 121 YTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
           +TV+FG+CKFPENFTGCQDLAKQKKVPFIS+D+ LECEGKDKYKCGSNVFWKW
Sbjct: 121 FTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171

[Close]

BLAST of Cla97C01G014340 vs. Swiss-Prot
Match: sp|P31093|PSAN_HORVU (Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAN PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-43
Identity = 94/143 (65.73%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 29  AVPSVASPGVVGYKLPAIRAQQARVPEAKNEGRRTALLYLGATLFAAAXXXXXSSANAGV 88
           AVP  ASP           A   RV  A  + RR+ALL L A    AA      SA A V
Sbjct: 16  AVPQSASP-----------AAAKRVQVAPAKDRRSALLGLAAVF--AATAASAGSARASV 75

Query: 89  IEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFIS 148
            ++YLEKSK NKELNDKKR ATSGANFARAYTV+FG+CKFP NFTGCQDLAKQKKVPFI+
Sbjct: 76  FDEYLEKSKLNKELNDKKRAATSGANFARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFIT 135

Query: 149 DDLELECEGKDKYKCGSNVFWKW 172
           DDLE+ECEGK+K+KCGSNVFWKW
Sbjct: 136 DDLEIECEGKEKFKCGSNVFWKW 145

[Close]

BLAST of Cla97C01G014340 vs. Swiss-Prot
Match: sp|O65107|PSAN_MAIZE (Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays OX=4577 GN=PSAN PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-41
Identity = 77/89 (86.52%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 83  SANAGVIEDYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQK 142
           SA A + ++YLEKSKANKELNDKKRLATSGANFARAYTVEFG+C+FP NFTGCQDLAKQK
Sbjct: 24  SAKATIFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQK 83

Query: 143 KVPFISDDLELECEGKDKYKCGSNVFWKW 172
           KVPFISDDLE+ECEGK+K+KCGSNVFWKW
Sbjct: 84  KVPFISDDLEIECEGKEKFKCGSNVFWKW 112

[Close]

BLAST of Cla97C01G014340 vs. Swiss-Prot
Match: sp|Q9SBN5|PSAN_VOLCA (Photosystem I reaction center subunit N, chloroplastic OS=Volvox carteri OX=3067 GN=PSAN PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25
Identity = 70/132 (53.03%), Postives = 86/132 (65.15%), Query Frame = 0


Query: 45  AIRAQQARVPEAK-----------NEGRRTALLYLGATLFAAAXXXXXSSANAGVIEDYL 104
           A+RAQ A+V  A+           +   R  LL LG  L AAA      +ANAGV+ED L
Sbjct: 4   AMRAQCAKVQAARPARATTVVCRASAQSRRELLGLGVLLGAAA---LAPAANAGVVEDLL 63

Query: 105 EKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLEL 164
            KS ANK LN+KKRLATS AN AR+ TV  GTC+FPENF GC++LA  K V +I++DL++
Sbjct: 64  AKSAANKALNNKKRLATSYANLARSRTVYDGTCQFPENFFGCEELAFNKGVKYIAEDLKI 123

Query: 165 ECEGKDKYKCGS 166
           ECEGKD   CGS
Sbjct: 124 ECEGKDAKSCGS 132

[Close]

BLAST of Cla97C01G014340 vs. TAIR10
Match: AT5G64040.2 (photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN))

HSP 1 Score: 158.3 bits (399), Expect = 4.2e-39
Identity = 88/144 (61.11%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 1   MATMNSSVLACNYAISGAGSADLNSKLTAVPSVASPGVVGYK-LPAIRAQQARVPEAK-N 60
           MA MNSSVL C+YAI+G+GS +LN K+  V S    G      +P I+AQ+    +   +
Sbjct: 1   MAAMNSSVLTCSYAIAGSGSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRVVGDDVDGS 60

Query: 61  EGRRTALLYLGATLFAAAXXXXXSSANAGVIEDYLEKSKANKELNDKKRLATSGANFARA 120
            GRR+A+++L ATLF+ A     +SANAGVI++YLE+SK NKELNDKKRLATSGANFARA
Sbjct: 61  NGRRSAMVFLAATLFSTA--AVSASANAGVIDEYLERSKTNKELNDKKRLATSGANFARA 120

Query: 121 YTVEFGTCKFPENFTGCQDLAKQK 143
           +TV+FG+CKFPENFTGCQDLAKQK
Sbjct: 121 FTVQFGSCKFPENFTGCQDLAKQK 142

The following BLAST results are available for this feature:

BLAST of Cla97C01G014340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441057.1	6.4e-86	99.42	PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis melo]	[more]
XP_004148659.1	1.1e-82	95.32	PREDICTED: photosystem I reaction center subunit N, chloroplastic [Cucumis sativ...	[more]
XP_023003251.1	3.7e-81	91.23	photosystem I reaction center subunit N, chloroplastic isoform X1 [Cucurbita max...	[more]
XP_022950888.1	4.8e-81	93.57	photosystem I reaction center subunit N, chloroplastic-like [Cucurbita moschata]	[more]
XP_022977968.1	4.0e-80	90.64	photosystem I reaction center subunit N, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Cla97C01G014340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B240\|A0A1S3B240_CUCME	4.3e-86	99.42	photosystem I reaction center subunit N, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0KFM1\|A0A0A0KFM1_CUCSA	7.5e-83	95.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483300 PE=4 SV=1	[more]
tr\|A0A1R3GGP6\|A0A1R3GGP6_COCAP	1.5e-70	81.61	Photosystem I PsaN, reaction centre subunit N OS=Corchorus capsularis OX=210143 ...	[more]
tr\|A0A1J7IRQ5\|A0A1J7IRQ5_LUPAN	1.5e-70	78.86	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_02461 PE=4 S...	[more]
tr\|F6I0D9\|F6I0D9_VITVI	3.3e-70	79.43	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0044g01410 PE=4 SV=...	[more]

BLAST of Cla97C01G014340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P49107\|PSAN_ARATH	2.1e-56	65.90	Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana O...	[more]
sp\|P31093\|PSAN_HORVU	1.2e-43	65.73	Photosystem I reaction center subunit N, chloroplastic OS=Hordeum vulgare OX=451...	[more]
sp\|O65107\|PSAN_MAIZE	1.5e-41	86.52	Photosystem I reaction center subunit N, chloroplastic (Fragment) OS=Zea mays OX...	[more]
sp\|Q9SBN5\|PSAN_VOLCA	1.1e-25	53.03	Photosystem I reaction center subunit N, chloroplastic OS=Volvox carteri OX=3067...	[more]

BLAST of Cla97C01G014340 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64040.2	4.2e-39	61.11	photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, puta...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **Cellular Component**
Term	Definition
GO:0009522	photosystem I

Vocabulary: **INTERPRO**
Term	Definition
IPR008796	PSAN

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0030093	chloroplast photosystem I
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G014340.1	Cla97C01G014340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:4.10.1190.10		coord: 87..171 e-value: 2.1E-52 score: 177.4
None	No IPR available	PANTHER	PTHR36814	FAMILY NOT NAMED	coord: 1..171
IPR008796	Photosystem I reaction centre subunit N, chloroplastic	PFAM	PF05479	PsaN	coord: 44..171 e-value: 1.4E-66 score: 222.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G014340	Cla008429	Watermelon (97103) v1	wmwmbB244
Cla97C01G014340	Csa6G483300	Cucumber (Chinese Long) v2	cuwmbB412
Cla97C01G014340	MELO3C008060	Melon (DHL92) v3.5.1	mewmbB516
Cla97C01G014340	ClCG01G015380	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G014340	CSPI06G26390	Wild cucumber (PI 183967)	cpiwmbB433
Cla97C01G014340	Cucsa.100880	Cucumber (Gy14) v1	cgywmbB127
Cla97C01G014340	CmaCh03G010990	Cucurbita maxima (Rimu)	cmawmbB670
Cla97C01G014340	CmoCh07G008310	Cucurbita moschata (Rifu)	cmowmbB849
Cla97C01G014340	Lsi01G011580	Bottle gourd (USVL1VR-Ls)	lsiwmbB115
Cla97C01G014340	CsGy6G025880	Cucumber (Gy14) v2	cgybwmbB394
Cla97C01G014340	MELO3C008060.2	Melon (DHL92) v3.6.1	medwmbB508
Cla97C01G014340	Carg05317	Silver-seed gourd	carwmbB0839
Cla97C01G014340	CsaV3_6G041600	Cucumber (Chinese Long) v3	cucwmbB430
Cla97C01G014340	Bhi03G001038	Wax gourd	wgowmbB399

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G014340	Silver-seed gourd	carwmbB0239
Cla97C01G014340	Cucurbita maxima (Rimu)	cmawmbB875
Cla97C01G014340	Cucurbita moschata (Rifu)	cmowmbB642