Cla021067 (gene) Watermelon (97103) v1

Overview
NameCla021067
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionWRKY family transcription factor (AHRD V1 **** D7LBR5_ARALL); contains Interpro domain(s) IPR003657 DNA-binding WRKY
LocationChr5 : 117031 .. 118615 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTGGATCCCAAAGATCATCAGGGCGAGGGCAGGTTGTTCCCAATATCAATTATCAAGTTCAAGTGTCGTTCCATCTCTCAAATGCACCGCATGATCCCCAGCCCATCCAGGAAATGGGATTCGTGCAATTGGAAGAGCAGAGCCAGGTTTTGAGCTTCTTGGCACCAAATAACGCCGCCATGCCACCTGCCTTTACTAACCCTACTACTTCTGCTCACACCTCACACCTCCTGCCTCGACCTTCTTGGAGTTCACAACAGCAGGTACGCTGCTGTATTATTATTTACTTTACTTATATATGTTTCTTAATTATATTAATTAGTAAGGGTTAGTAATTCCGATCCCATCAGGTGGGCGGAACAGTGGATCCGAAGGCCGGGAACGAGGAAAACTGCACGGGTAGTGCTAGTGACGGCAGCAATTCATGGTATACAAATAGAATACAACAACCCTAATTAATTAATTCCCTAGCTACGTACACAACTTTCATATTGTAATATTGTTTAATTTGCATAGGTAGCTAGGAATATGAATATGAATATGAATGATGATCCTGTGTGCACTGCGCAGGTGGAGAAACACAAACCCAGATAAGAGTAAGGTGAAGGTGAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACCAGAAGCGATGTAGATGTCCTCGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTCGTCAAGAACAGCCTTCATCCTAGGTACCATATGCACCAACTGCTACTTACTACTTCTACTGCCGCCCAAACCCTATCCAATTTCATCCTAACTTTTACTTCTTTCTACTTCACGATTACATATTACAAATGTTCATACTAAATTAATTAAAGGCATGCGGATTCTCATAACTTGCATTGCATTGCATTGTATGATAGAGTTGTTCATTCATTAGTCGATAAGGGGAAGTAGATCAGACAAATAATGCACCAATCGGAATGAAAACAATCGATTAGTTAGTATAGAAAATAGGAATATACACATATACATATACATAGAAAGAGAGAGAGAGAGAAAGAGGGTAATTAATTAATAATTATGAGAAAGAGAGAAATAATAATGGAAGTGAAGGGGGGGGGGGGGGGGGGTGGGGGGTGGGGGGGGGGGGTTCAGTAGTAGGCAGATTGGGAATGATTATGTTATATTCTCTCGCCAGGGCCATCATTATTGGTTTGGGTTTATGGTTAGAACTACCAGTCATCCATATATTCTCTTCTGTTTATAATTTTGACTACTACTCATCCATCTGCACAACACAACATATATATATATATATATATACACATTTATTTTTTTTTGTTTGTTTGGTTCCCTTTATCCACGTTTCATCTTCAGTCTAATCTCAGTAATGTAATGTTGATTAATTTTGAATTAATTAAATTTGCAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGAGTGGAGAGACTGTCGGAGGATTGCCGGATGGTGATAACCACCTACGAAGGTAGACACAACCACTCTCCTTGCGACGACTCCAATTCTTCAGAGCACGAACCCTTTACATCCTTCTGA

mRNA sequence

ATGGAAACTGGATCCCAAAGATCATCAGGGCGAGGGCAGGTTGTTCCCAATATCAATTATCAAGTTCAAGTGTCGTTCCATCTCTCAAATGCACCGCATGATCCCCAGCCCATCCAGGAAATGGGATTCGTGCAATTGGAAGAGCAGAGCCAGGTTTTGAGCTTCTTGGCACCAAATAACGCCGCCATGCCACCTGCCTTTACTAACCCTACTACTTCTGCTCACACCTCACACCTCCTGCCTCGACCTTCTTGGAGTTCACAACAGCAGGTGGGCGGAACAGTGGATCCGAAGGCCGGGAACGAGGAAAACTGCACGGGTAGTGCTAGTGACGGCAGCAATTCATGGTGGAGAAACACAAACCCAGATAAGAGTAAGGTGAAGGTGAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACCAGAAGCGATGTAGATGTCCTCGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTCGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGAGTGGAGAGACTGTCGGAGGATTGCCGGATGGTGATAACCACCTACGAAGGTAGACACAACCACTCTCCTTGCGACGACTCCAATTCTTCAGAGCACGAACCCTTTACATCCTTCTGA

Coding sequence (CDS)

ATGGAAACTGGATCCCAAAGATCATCAGGGCGAGGGCAGGTTGTTCCCAATATCAATTATCAAGTTCAAGTGTCGTTCCATCTCTCAAATGCACCGCATGATCCCCAGCCCATCCAGGAAATGGGATTCGTGCAATTGGAAGAGCAGAGCCAGGTTTTGAGCTTCTTGGCACCAAATAACGCCGCCATGCCACCTGCCTTTACTAACCCTACTACTTCTGCTCACACCTCACACCTCCTGCCTCGACCTTCTTGGAGTTCACAACAGCAGGTGGGCGGAACAGTGGATCCGAAGGCCGGGAACGAGGAAAACTGCACGGGTAGTGCTAGTGACGGCAGCAATTCATGGTGGAGAAACACAAACCCAGATAAGAGTAAGGTGAAGGTGAGGAGAAAGCTGAGAGAGCCGCGTTTCTGTTTCCAGACCAGAAGCGATGTAGATGTCCTCGACGATGGCTATAAATGGAGAAAATATGGCCAAAAAGTCGTCAAGAACAGCCTTCATCCTAGAAGCTACTATCGTTGCACGCATAGCAACTGCCGAGTGAAGAAGAGAGTGGAGAGACTGTCGGAGGATTGCCGGATGGTGATAACCACCTACGAAGGTAGACACAACCACTCTCCTTGCGACGACTCCAATTCTTCAGAGCACGAACCCTTTACATCCTTCTGA

Protein sequence

METGSQRSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNNAAMPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Homology
[Close]
BLAST of Cla021067 vs. Swiss-Prot
Match: WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.9e-56
Identity = 117/209 (55.98%), Postives = 145/209 (69.38%), Query Frame = 1 

Query: 25  SFHLSNAPHDPQPIQE-MGFVQLEEQSQVLSFLAPNNAAM--PPAFTNPTTSAHTSHLLP 84
           ++ L         IQE M F+   E++ VL+F + ++++    P+F    +S+ T+   P
Sbjct: 11  NYDLQQVTSSSTTIQENMNFLVPFEETNVLTFFSSSSSSSLSSPSFPIHNSSSTTTTHAP 70

Query: 85  RPSWSSQQQVGGTVDPKAGNE--ENCTGSASDG--SNSWWRNTNPD---KSKVKVRRKLR 144
              +S+  Q GG +  K  N+  EN  G  ++   SNSWWR+ +     K+KVK+RRKLR
Sbjct: 71  L-GFSNNLQGGGPLGSKVVNDDQENFGGGTNNDAHSNSWWRSNSGSGDMKNKVKIRRKLR 130

Query: 145 EPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCR 204
           EPRFCFQT+SDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVKKRVERLSEDCR
Sbjct: 131 EPRFCFQTKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCR 190

Query: 205 MVITTYEGRHNHSPCDDSNSSEHEPFTSF 224
           MVITTYEGRHNH P DDS S +H+  +SF
Sbjct: 191 MVITTYEGRHNHIPSDDSTSPDHDCLSSF 218

[Close]
BLAST of Cla021067 vs. Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.4e-36
Identity = 74/104 (71.15%), Postives = 83/104 (79.81%), Query Frame = 1 

Query: 126 KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKR 185
           K+K RRK+REPRFCF+T S+VDVLDDGY+WRKYGQKVVKN+ HPRSYYRCT   CRVKKR
Sbjct: 199 KLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKR 258

Query: 186 VERLSEDCRMVITTYEGRHNHSPC----DDSNSSE--HEPFTSF 224
           VERL++D RMVITTYEGRH HSP     DDS S+   H P ++F
Sbjct: 259 VERLADDPRMVITTYEGRHLHSPSNHLDDDSLSTSHLHPPLSNF 302

[Close]
BLAST of Cla021067 vs. Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.3e-29
Identity = 68/139 (48.92%), Postives = 82/139 (58.99%), Query Frame = 1 

Query: 68  TNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWWRNTNPDKSKV 127
           T  T+S  +S  +     S+      T        EN T SA            P K K 
Sbjct: 69  TTVTSSCSSSAAVSVAVTSTNNNPSATSSSSEDPAENSTASAEKTPPP----ETPVKEKK 128

Query: 128 KVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVE 187
           K ++++R+PRF F T+SDVD L+DGY+WRKYGQK VKNS  PRSYYRCT+S C VKKRVE
Sbjct: 129 KAQKRIRQPRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVE 188

Query: 188 RLSEDCRMVITTYEGRHNH 207
           R S+D  +VITTYEG+H H
Sbjct: 189 RSSDDPSIVITTYEGQHCH 203

[Close]
BLAST of Cla021067 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-28
Identity = 79/200 (39.50%), Postives = 105/200 (52.50%), Query Frame = 1 

Query: 27  HLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNNAAMPPAFTNPTTSAHTSHL--LPRPS 86
           H SN P+         F+ L  Q    +  + +++    AF  P  + +TS    LP P 
Sbjct: 86  HSSNNPNS--------FLDLLRQDHQFASSSNSSSFSFDAFPLPNNNNNTSFFTDLPLPQ 145

Query: 87  WSSQQQVGGT-VDPKAGNEENCTGSASDGSNSWWRNTNPD-----------------KSK 146
             S + V  T   P + +  + +  A++ +NS    T  D                 K+K
Sbjct: 146 AESSEVVNTTPTSPNSTSVSSSSNEAANDNNSGKEVTVKDQEEGDQQQEQKGTKPQLKAK 205

Query: 147 VKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRV 206
            K ++K RE RF F T+SD+D LDDGY+WRKYGQK VKNS +PRSYYRCT   C VKKRV
Sbjct: 206 KKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRV 265

[Close]
BLAST of Cla021067 vs. Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.0e-28
Identity = 62/104 (59.62%), Postives = 73/104 (70.19%), Query Frame = 1 

Query: 107 GSASDGSNSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNS 166
           G  S+ SN+   N N +K K K  R L   R  F TRSD DVLDDGY+WRKYGQK VKN+
Sbjct: 73  GLVSNNSNNSDHNKNCNKGKGK--RTLAMQRIAFHTRSDDDVLDDGYRWRKYGQKSVKNN 132

Query: 167 LHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCD 211
            HPRSYYRCT+  C VKK+V+RL++D  +V+TTYEG HNH PC+
Sbjct: 133 AHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYEGVHNH-PCE 173

[Close]
BLAST of Cla021067 vs. TrEMBL
Match: A0A0A0L3J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116700 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.1e-94
Identity = 179/230 (77.83%), Postives = 193/230 (83.91%), Query Frame = 1 

Query: 1   METGSQ--RSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAP 60
           METG+Q  RSSGRG+     +Y+VQVSFHLSN PH    I EMGFVQLEE SQVLSFLAP
Sbjct: 1   METGTQTQRSSGRGE-----DYEVQVSFHLSNDPHH---IHEMGFVQLEEHSQVLSFLAP 60

Query: 61  NNA-----AMPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGS 120
           NN        PP FT  TTS H S++LPRP   +  Q+ GT+DPK GN+ENCT +A+D +
Sbjct: 61  NNNNNTTNMPPPPFT--TTSPH-SNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDAT 120

Query: 121 NSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYY 180
           NSWWRNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYY
Sbjct: 121 NSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYY 180

Query: 181 RCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 224
           RCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHEPFTSF
Sbjct: 181 RCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 219

[Close]
BLAST of Cla021067 vs. TrEMBL
Match: A0A140H8S6_MANES (WRKY transcription factor 72 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.3e-77
Identity = 146/206 (70.87%), Postives = 169/206 (82.04%), Query Frame = 1 

Query: 19  NYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNNAAMPPAFTNPTTSAHTSH 78
           NY++QVSF        PQ I EMGFVQ E+ +QVLSFLAP+++  P   + P T++ T+ 
Sbjct: 10  NYELQVSFST------PQAIHEMGFVQFED-NQVLSFLAPSHSHQPSHISQPLTTSTTN- 69

Query: 79  LLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWWRNTNP-DKSKVKVRRKLREPR 138
                 ++S     GT+DPKA  E+NCTGSA+DG+NSWWR+++  +KSKVK+RRKLREPR
Sbjct: 70  --TNTGFTSHNDQVGTLDPKANIEDNCTGSANDGNNSWWRSSSSSEKSKVKIRRKLREPR 129

Query: 139 FCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVI 198
           FCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVKKRVERLSEDCRMVI
Sbjct: 130 FCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVI 189

Query: 199 TTYEGRHNHSPCDDSNSSEHEPFTSF 224
           TTYEGRHNHSPCDDSNSSEHE FTSF
Sbjct: 190 TTYEGRHNHSPCDDSNSSEHECFTSF 205

[Close]
BLAST of Cla021067 vs. TrEMBL
Match: F8RKQ9_MEDTR (STP OS=Medicago truncatula GN=MTR_8g007270 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-75
Identity = 149/227 (65.64%), Postives = 168/227 (74.01%), Query Frame = 1 

Query: 19  NYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNNAAMPPAF----------T 78
           NY +QVSF      + PQ I EMGFVQ EE +QVLSFL+P+  + P             T
Sbjct: 9   NYDLQVSF-----TNTPQAIHEMGFVQFEE-NQVLSFLSPSTQSQPSQLSQSLNSGRGTT 68

Query: 79  NPTTSA------------HTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSW 138
           N TT A            H   +  R  W+++Q    T+DPKA ++ENCTG+ SDG+N+W
Sbjct: 69  NATTGAAVTTTTVAAGFSHNDLVTTRTPWNNEQV--RTLDPKAVSDENCTGNTSDGNNTW 128

Query: 139 WRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCT 198
           WR+   +KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCT
Sbjct: 129 WRSGGAEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCT 188

Query: 199 HSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 224
           H+NCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHE FTSF
Sbjct: 189 HNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 227

[Close]
BLAST of Cla021067 vs. TrEMBL
Match: A0A0S3SVH6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G016400 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.1e-75
Identity = 150/230 (65.22%), Postives = 169/230 (73.48%), Query Frame = 1 

Query: 17  NINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNN---------------- 76
           N +Y +QVSF      + PQ I EMGFVQ EE +QVLSFL P+                 
Sbjct: 8   NPSYDLQVSFS-----NTPQAIHEMGFVQFEE-NQVLSFLTPSAQSQSSQLSQSLTGGNT 67

Query: 77  ---AAMPPAFTNPTTSAHT----SHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGS 136
              A +    T  TTS       + L  R SW+++Q    T+DPKA N+ENCTG+ SDG+
Sbjct: 68  VTAATVTTTITTTTTSGSVGFNHNDLASRSSWNNEQV--RTLDPKAVNDENCTGNTSDGN 127

Query: 137 NSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYY 196
           N+WWRN+  +K+KVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYY
Sbjct: 128 NTWWRNSGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYY 187

Query: 197 RCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 224
           RCTH+NCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHE FTSF
Sbjct: 188 RCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 229

[Close]
BLAST of Cla021067 vs. TrEMBL
Match: B9GP75_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s13980g PE=4 SV=2)

HSP 1 Score: 289.3 bits (739), Expect = 4.1e-75
Identity = 147/215 (68.37%), Postives = 172/215 (80.00%), Query Frame = 1 

Query: 12  GQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNNAAM--PPAFTN 71
           G+ VPN  Y +QVSF        PQ I EMGFVQ EE +QVLSFLAP+ ++    P  TN
Sbjct: 5   GREVPN--YGLQVSFST------PQAIHEMGFVQFEE-NQVLSFLAPSQSSQISQPLNTN 64

Query: 72  PTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSAS-DGSNSWWRNTNPDKSKVK 131
            TT++H         +S   +  GT+DPK  ++ENCTG+A+ DG+NSWWR+++ +K+++K
Sbjct: 65  TTTNSHMG-------FSHNDEQVGTMDPKPSSDENCTGNANNDGNNSWWRSSSSEKNRLK 124

Query: 132 VRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVER 191
           VRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVKKRVER
Sbjct: 125 VRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVER 184

Query: 192 LSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 224
           LSEDCRMVITTYEGRHNHSPC+DSNSSEHE FTSF
Sbjct: 185 LSEDCRMVITTYEGRHNHSPCEDSNSSEHECFTSF 203

[Close]
BLAST of Cla021067 vs. NCBI nr
Match: gi|659074721|ref|XP_008437760.1| (PREDICTED: probable WRKY transcription factor 12 [Cucumis melo])

HSP 1 Score: 352.8 bits (904), Expect = 4.3e-94
Identity = 180/231 (77.92%), Postives = 193/231 (83.55%), Query Frame = 1 

Query: 1   METGSQ--RSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAP 60
           METG+Q  RSSGRG+     +Y+VQVSFHLSN PH    I EMGFVQLEE SQVLSFLAP
Sbjct: 1   METGTQTQRSSGRGE-----DYEVQVSFHLSNDPHH---IHEMGFVQLEEHSQVLSFLAP 60

Query: 61  NNA------AMPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDG 120
           NN         PP FT  TTS H S++LPRP   +  Q+ GT+DPK GN+ENCT +A+D 
Sbjct: 61  NNNNNNATNMPPPPFT--TTSPH-SNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDA 120

Query: 121 SNSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSY 180
           +NSWWRNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSY
Sbjct: 121 TNSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSY 180

Query: 181 YRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 224
           YRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF
Sbjct: 181 YRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 220

[Close]
BLAST of Cla021067 vs. NCBI nr
Match: gi|449431940|ref|XP_004133758.1| (PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 7.4e-94
Identity = 179/230 (77.83%), Postives = 193/230 (83.91%), Query Frame = 1 

Query: 1   METGSQ--RSSGRGQVVPNINYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAP 60
           METG+Q  RSSGRG+     +Y+VQVSFHLSN PH    I EMGFVQLEE SQVLSFLAP
Sbjct: 1   METGTQTQRSSGRGE-----DYEVQVSFHLSNDPHH---IHEMGFVQLEEHSQVLSFLAP 60

Query: 61  NNA-----AMPPAFTNPTTSAHTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGS 120
           NN        PP FT  TTS H S++LPRP   +  Q+ GT+DPK GN+ENCT +A+D +
Sbjct: 61  NNNNNTTNMPPPPFT--TTSPH-SNILPRPPSWTNHQLPGTLDPKPGNDENCTATATDAT 120

Query: 121 NSWWRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYY 180
           NSWWRNTN DKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYY
Sbjct: 121 NSWWRNTNADKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYY 180

Query: 181 RCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 224
           RCTHSNCRVKKRVERLSEDCRMVITTYEGRHNH+PCDDSNSSEHEPFTSF
Sbjct: 181 RCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHTPCDDSNSSEHEPFTSF 219

[Close]
BLAST of Cla021067 vs. NCBI nr
Match: gi|225453346|ref|XP_002270527.1| (PREDICTED: probable WRKY transcription factor 12 [Vitis vinifera])

HSP 1 Score: 303.5 bits (776), Expect = 3.0e-79
Identity = 154/222 (69.37%), Postives = 176/222 (79.28%), Query Frame = 1 

Query: 19  NYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNNAAM-------------PP 78
           NY++QVS+  +     PQ I EMGFVQ EE +QVLSFLAP+ +A               P
Sbjct: 15  NYELQVSYSTT-----PQGIHEMGFVQFEE-NQVLSFLAPSQSAQMSQPLNTASTSTPTP 74

Query: 79  AFTNPTTSAHT----SHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWWRNTN 138
             TN TT+       + LL RPSW+++Q   GT+DPKA NEENCTG+A+DGSNSWWR+++
Sbjct: 75  TPTNTTTNTTMGFTHNDLLTRPSWNNEQV--GTLDPKAVNEENCTGNANDGSNSWWRSSS 134

Query: 139 PDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCR 198
            +K+KVK RRKLREPRFCFQTRS+VDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCR
Sbjct: 135 SEKTKVKARRKLREPRFCFQTRSEVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHTNCR 194

Query: 199 VKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 224
           VKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHE FTSF
Sbjct: 195 VKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 228

[Close]
BLAST of Cla021067 vs. NCBI nr
Match: gi|1003003140|gb|AMO00440.1| (WRKY transcription factor 72 [Manihot esculenta])

HSP 1 Score: 296.2 bits (757), Expect = 4.8e-77
Identity = 146/206 (70.87%), Postives = 169/206 (82.04%), Query Frame = 1 

Query: 19  NYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNNAAMPPAFTNPTTSAHTSH 78
           NY++QVSF        PQ I EMGFVQ E+ +QVLSFLAP+++  P   + P T++ T+ 
Sbjct: 10  NYELQVSFST------PQAIHEMGFVQFED-NQVLSFLAPSHSHQPSHISQPLTTSTTN- 69

Query: 79  LLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSWWRNTNP-DKSKVKVRRKLREPR 138
                 ++S     GT+DPKA  E+NCTGSA+DG+NSWWR+++  +KSKVK+RRKLREPR
Sbjct: 70  --TNTGFTSHNDQVGTLDPKANIEDNCTGSANDGNNSWWRSSSSSEKSKVKIRRKLREPR 129

Query: 139 FCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVI 198
           FCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTH+NCRVKKRVERLSEDCRMVI
Sbjct: 130 FCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVI 189

Query: 199 TTYEGRHNHSPCDDSNSSEHEPFTSF 224
           TTYEGRHNHSPCDDSNSSEHE FTSF
Sbjct: 190 TTYEGRHNHSPCDDSNSSEHECFTSF 205

[Close]
BLAST of Cla021067 vs. NCBI nr
Match: gi|922331762|ref|XP_013443872.1| (WRKY family transcription factor [Medicago truncatula])

HSP 1 Score: 290.4 bits (742), Expect = 2.6e-75
Identity = 149/227 (65.64%), Postives = 168/227 (74.01%), Query Frame = 1 

Query: 19  NYQVQVSFHLSNAPHDPQPIQEMGFVQLEEQSQVLSFLAPNNAAMPPAF----------T 78
           NY +QVSF      + PQ I EMGFVQ EE +QVLSFL+P+  + P             T
Sbjct: 9   NYDLQVSF-----TNTPQAIHEMGFVQFEE-NQVLSFLSPSTQSQPSQLSQSLNSGRGTT 68

Query: 79  NPTTSA------------HTSHLLPRPSWSSQQQVGGTVDPKAGNEENCTGSASDGSNSW 138
           N TT A            H   +  R  W+++Q    T+DPKA ++ENCTG+ SDG+N+W
Sbjct: 69  NATTGAAVTTTTVAAGFSHNDLVTTRTPWNNEQV--RTLDPKAVSDENCTGNTSDGNNTW 128

Query: 139 WRNTNPDKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCT 198
           WR+   +KSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCT
Sbjct: 129 WRSGGAEKSKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCT 188

Query: 199 HSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHEPFTSF 224
           H+NCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHE FTSF
Sbjct: 189 HNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF 227

The following BLAST results are available for this feature:
BLAST of Cla021067 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK12_ARATH7.9e-5655.98Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=... [more]
WRK13_ARATH2.4e-3671.15Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=... [more]
WRK57_ARATH6.3e-2948.92Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=... [more]
WRK48_ARATH2.4e-2839.50Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=... [more]
WRK56_ARATH7.0e-2859.62Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=... [more]
BLAST of Cla021067 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3J0_CUCSA5.1e-9477.83Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116700 PE=4 SV=1[more]
A0A140H8S6_MANES3.3e-7770.87WRKY transcription factor 72 OS=Manihot esculenta PE=2 SV=1[more]
F8RKQ9_MEDTR1.8e-7565.64STP OS=Medicago truncatula GN=MTR_8g007270 PE=2 SV=1[more]
A0A0S3SVH6_PHAAN3.1e-7565.22Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G016400 PE=... [more]
B9GP75_POPTR4.1e-7568.37Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s13980g PE=4 SV=2[more]
BLAST of Cla021067 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074721|ref|XP_008437760.1|4.3e-9477.92PREDICTED: probable WRKY transcription factor 12 [Cucumis melo][more]
gi|449431940|ref|XP_004133758.1|7.4e-9477.83PREDICTED: probable WRKY transcription factor 12 [Cucumis sativus][more]
gi|225453346|ref|XP_002270527.1|3.0e-7969.37PREDICTED: probable WRKY transcription factor 12 [Vitis vinifera][more]
gi|1003003140|gb|AMO00440.1|4.8e-7770.87WRKY transcription factor 72 [Manihot esculenta][more]
gi|922331762|ref|XP_013443872.1|2.6e-7565.64WRKY family transcription factor [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009718 anthocyanin-containing compound biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006241 CTP biosynthetic process
biological_process GO:0006183 GTP biosynthetic process
biological_process GO:0006165 nucleoside diphosphate phosphorylation
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006228 UTP biosynthetic process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004550 nucleoside diphosphate kinase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU44513watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021067Cla021067.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU44513WMU44513transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainGENE3DG3DSA:2.20.25.80coord: 134..207
score: 5.0
IPR003657WRKY domainPFAMPF03106WRKYcoord: 150..206
score: 2.5
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 149..208
score: 6.5
IPR003657WRKY domainPROFILEPS50811WRKYcoord: 144..206
score: 29
IPR003657WRKY domainunknownSSF118290WRKY DNA-binding domaincoord: 141..207
score: 1.12
NoneNo IPR availablePANTHERPTHR31221FAMILY NOT NAMEDcoord: 25..215
score: 4.5